BLASTX nr result
ID: Cinnamomum24_contig00017813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00017813
(797 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31957.3| unnamed protein product [Vitis vinifera] 187 9e-45
ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associat... 185 3e-44
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera] 182 3e-43
ref|XP_010934978.1| PREDICTED: TATA box-binding protein-associat... 174 4e-41
ref|XP_003539004.1| PREDICTED: TATA box-binding protein-associat... 172 2e-40
ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associat... 169 2e-39
ref|XP_008222719.1| PREDICTED: TATA box-binding protein-associat... 165 4e-38
gb|AES89250.2| TATA box-binding protein associated factor RNA po... 163 1e-37
gb|KEH29974.1| TATA box-binding protein associated factor RNA po... 163 1e-37
ref|XP_007224504.1| hypothetical protein PRUPE_ppa023055mg, part... 163 1e-37
ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phas... 163 1e-37
ref|XP_004507506.1| PREDICTED: TATA box-binding protein-associat... 163 1e-37
ref|XP_010086553.1| hypothetical protein L484_001445 [Morus nota... 162 3e-37
ref|XP_008337501.1| PREDICTED: TATA box-binding protein-associat... 161 5e-37
ref|XP_002522432.1| conserved hypothetical protein [Ricinus comm... 161 5e-37
ref|XP_010044748.1| PREDICTED: TATA box-binding protein-associat... 157 6e-36
gb|KCW86852.1| hypothetical protein EUGRSUZ_B03445 [Eucalyptus g... 157 6e-36
ref|XP_009371111.1| PREDICTED: TATA box-binding protein-associat... 157 1e-35
ref|XP_009800662.1| PREDICTED: TATA box-binding protein-associat... 155 2e-35
ref|XP_009391050.1| PREDICTED: TATA box-binding protein-associat... 155 3e-35
>emb|CBI31957.3| unnamed protein product [Vitis vinifera]
Length = 713
Score = 187 bits (474), Expect = 9e-45
Identities = 107/233 (45%), Positives = 143/233 (61%), Gaps = 6/233 (2%)
Frame = -3
Query: 681 KPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF- 505
KP +SS Q SE DATELLC+L+ YD+L D ++YSKDL +YL+YCKDVV+AGL F
Sbjct: 371 KPVTNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELPFE 430
Query: 504 --EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CFPKRSRDEGNTIDSTDCRQSTDGPI 340
EE+ IEQLW Y+ Q+D +PS + G C KRSR++ I+S P
Sbjct: 431 DHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINSI--------PK 482
Query: 339 TRMKLRTKGHRSLSMDDDINQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVC 160
+ K+R DD + KEEA+ ++K+DME ++ Y+PPR K R Y+
Sbjct: 483 EKKKIR---------DDCSVPLVETLKEEAILRMKADMEENRFCYIPPRVNVK-RFDYLH 532
Query: 159 YTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
Y RK G + + A ADYYILLR CAR+ Q+D+R MH+G + LE+RL WIEKR
Sbjct: 533 YVRKKDEGSYIYAAHADYYILLRACARVAQVDVRSMHVGVMSLERRLGWIEKR 585
>ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Vitis vinifera]
Length = 722
Score = 185 bits (470), Expect = 3e-44
Identities = 109/246 (44%), Positives = 149/246 (60%), Gaps = 17/246 (6%)
Frame = -3
Query: 687 DRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS 508
+ +P +SS Q SE DATELLC+L+ YD+L D ++YSKDL +YL+YCKDVV+AGL
Sbjct: 443 NEEPVTNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELP 502
Query: 507 F---EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CFPKRSRDEGNTIDS--------- 373
F EE+ IEQLW Y+ Q+D +PS + G C KRSR++ I+S
Sbjct: 503 FEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINSIPKEKKKIR 562
Query: 372 TDCR--QSTDGPITRMKLRTKGHRSLSMDDDINQTWMSPKEEALRQIKSDMELDKLHYLP 199
DC DG T + + G +S+ +T KEEA+ ++K+DME ++ Y+P
Sbjct: 563 DDCSVPLGLDGDDTSLNSQ-GGQKSVPTHQASVETL---KEEAILRMKADMEENRFCYIP 618
Query: 198 PRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRL 19
PR K R Y+ Y RK G + + A ADYYILLR CAR+ Q+D+R MH+G + LE+RL
Sbjct: 619 PRVNVK-RFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVRSMHVGVMSLERRL 677
Query: 18 SWIEKR 1
WIEKR
Sbjct: 678 GWIEKR 683
>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
Length = 722
Score = 182 bits (461), Expect = 3e-43
Identities = 106/250 (42%), Positives = 146/250 (58%), Gaps = 21/250 (8%)
Frame = -3
Query: 687 DRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS 508
+ +P +SS Q SE DATELLC+L+ YD+L D ++YSKDL +YL+YCKDVV+AGL
Sbjct: 443 NEEPVTNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELP 502
Query: 507 F---EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CFPKRSRDEGNTIDSTDCRQSTDG 346
F EE+ IEQLW Y+ Q+D +PS + G C KRSR++ I+S
Sbjct: 503 FEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINSI-------- 554
Query: 345 PITRMKLRTKGHRSLSMDDDINQ---------------TWMSPKEEALRQIKSDMELDKL 211
P + K+R L +D D + + KEEA+ ++K+DME ++
Sbjct: 555 PKEKKKIRDDCSVPLGLDGDDTSLNSQGGQXSVPTHQASVETVKEEAILRMKADMEENRF 614
Query: 210 HYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKL 31
Y+P R K R Y+ Y RK G + + A ADYYILLR CAR+ Q+D+R MH+G + L
Sbjct: 615 CYIPXRVNVK-RFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVRSMHVGVMSL 673
Query: 30 EKRLSWIEKR 1
E+RL WIEKR
Sbjct: 674 ERRLGWIEKR 683
>ref|XP_010934978.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Elaeis guineensis]
Length = 764
Score = 174 bits (442), Expect = 4e-41
Identities = 101/234 (43%), Positives = 142/234 (60%), Gaps = 18/234 (7%)
Frame = -3
Query: 648 SELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDNFIEQLWNL 469
+E D ELL LE AYDK++D HDYSKDL SYLKYCKD+++AG+TTS++E+ IE+LWN+
Sbjct: 518 TEFDTKELLGILEGAYDKISDAHDYSKDLQSYLKYCKDIIFAGITTSYDEEILIERLWNI 577
Query: 468 YETQE-------------DIK----PSVEPGTGCCFPKRSRDEGNTIDSTDCRQSTDGPI 340
Y+ QE D+K P + K+ R++ + + D +S D P+
Sbjct: 578 YDKQEVDNLQEDAKFEFLDLKGKRLRDEVPSSESINSKKPREDSKSSLNEDIGRSLDTPM 637
Query: 339 TRMKLRTKGHRSLSMDDDI-NQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYV 163
KL T + L D + N + S K L ++K +ME + YLPPR + GY+
Sbjct: 638 D-SKL-TSTYEFLRNDSGLCNTSSTSCKSYTLDKMKINMEENGFQYLPPRLHQRT-DGYL 694
Query: 162 CYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
Y RK + GK +VA ADYYI+LR CA+L Q+D+RVMHL LK E+RL+WIE++
Sbjct: 695 HYKRKRVDGKLIYVAHADYYIILRACAKLAQVDVRVMHLSVLKFERRLAWIEQQ 748
>ref|XP_003539004.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B-like [Glycine max]
gi|734418922|gb|KHN39839.1| hypothetical protein
glysoja_020579 [Glycine soja]
Length = 719
Score = 172 bits (436), Expect = 2e-40
Identities = 105/261 (40%), Positives = 146/261 (55%), Gaps = 34/261 (13%)
Frame = -3
Query: 681 KPSRSSSPIQIS----ELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLT 514
K S+ S+ Q+ ELD+ LL HL+ Y+++AD + YSKDL +YLKYC+DVV+AG
Sbjct: 434 KESKDSAEDQVGSQKHELDSAWLLQHLQARYNEIADTYGYSKDLATYLKYCRDVVFAGSE 493
Query: 513 TSF---EEDNFIEQLWNLYETQEDIKPS--VEPGTGCCFPKRSRDEGNTIDSTDCRQSTD 349
S+ EE+ IE LW Y+ +ED KPS VE SRD+G
Sbjct: 494 PSYGNHEEEKMIEYLWKFYQNEEDTKPSENVEQSNTSFNQTSSRDKGCI----------- 542
Query: 348 GPITRM-KLRTKGHRSLSMDDDIN------------------------QTWMSPKEEALR 244
G I++ K+R KG L DDD + + S +EA+R
Sbjct: 543 GKISKEEKIRKKGFNELFPDDDTSLEDVSNNNSHESLSDSEDSDSQEHSSGKSHVKEAIR 602
Query: 243 QIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQID 64
Q+K +ME ++ +Y+PP K K R Y+ Y RK G +VA ADYYILLR CAR+ Q+D
Sbjct: 603 QMKLEMEENRFYYIPPSVKRK-RLDYIHYVRKRDEGALTYVAHADYYILLRACARIAQVD 661
Query: 63 IRVMHLGALKLEKRLSWIEKR 1
IR++H+G L+LE+RL+W+EKR
Sbjct: 662 IRILHIGVLRLERRLAWLEKR 682
>ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B isoform X1 [Phoenix dactylifera]
Length = 744
Score = 169 bits (427), Expect = 2e-39
Identities = 97/236 (41%), Positives = 137/236 (58%), Gaps = 20/236 (8%)
Frame = -3
Query: 648 SELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDNFIEQLWNL 469
+E D ELL LE AYDK++D HDYSKDL SYLKYCKD+++AG+TTS++E+ IE+LWN+
Sbjct: 486 AEFDTKELLGILEAAYDKISDAHDYSKDLQSYLKYCKDIIFAGITTSYDEEILIERLWNI 545
Query: 468 YETQE--DIKPSVEPGTGCCFPKRSRDE---GNTIDSTDCRQST---------------D 349
Y+ QE +++ V+ KR RDE IDS R+ + D
Sbjct: 546 YDKQEVDNLQEDVKFEFLDLKGKRLRDEVPSSELIDSKKPREDSKSSQNEGIGRSDTPMD 605
Query: 348 GPITRMKLRTKGHRSLSMDDDINQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSG 169
+T + L + T S K L ++K +ME + YLPPR +
Sbjct: 606 SKLTTRYEFLRNDSGLQGKHPVCGTSTSSKSSTLAKMKINMEENGFQYLPPRIHQRT-DD 664
Query: 168 YVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
Y+ Y RK + GK +VA ADYYI+LR C++L Q+D+R+MHL LK E+RL+WIE++
Sbjct: 665 YLHYGRKRVDGKLIYVAHADYYIILRACSKLAQVDVRIMHLSVLKFERRLAWIEQQ 720
>ref|XP_008222719.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Prunus mume]
Length = 721
Score = 165 bits (417), Expect = 4e-38
Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 24/261 (9%)
Frame = -3
Query: 711 VDSCDTEMDRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDV 532
+D DTE+ R S + Q SELDA ELL LE ++++AD ++Y KDL +YL++CKDV
Sbjct: 425 LDDTDTELVRNLSNA----QNSELDAAELLSSLEAKHNEIADTYEYCKDLPTYLQFCKDV 480
Query: 531 VYAGLTTSFE---EDNFIEQLWNLYETQEDIKPSVEPGTGC---CFPKRSRDE------- 391
V+AG +SF+ E+ IE LWN Y++++D + +VE G C KR RD
Sbjct: 481 VFAGSKSSFKDHKEEELIELLWNFYQSRKDSETAVEQGLLCGETVNQKRLRDNEECTNDI 540
Query: 390 ------GNTIDSTDCRQSTDGPITRMKLRTK-GHRSLSMDDDINQTWMSP----KEEALR 244
N + + + P+ + R+K G S S + + ++ KEEA+
Sbjct: 541 SKEKRFSNKLPVSSPYSGDETPLADDQQRSKNGDNSCSSSQNSQNSEVNDAEALKEEAIA 600
Query: 243 QIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQID 64
++K DME + Y+PPR K R Y+ Y RK G + +VA ADYYILLR CAR+ +++
Sbjct: 601 RMKLDMEEKRFFYIPPRVNLK-RFDYLHYVRKKDEGAYTYVAHADYYILLRACARVAEVE 659
Query: 63 IRVMHLGALKLEKRLSWIEKR 1
IR MH+ L E+RL+W+EKR
Sbjct: 660 IRCMHIAVLSFERRLAWMEKR 680
>gb|AES89250.2| TATA box-binding protein associated factor RNA polymerase I subunit
B-like protein [Medicago truncatula]
Length = 641
Score = 163 bits (413), Expect = 1e-37
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 4/222 (1%)
Frame = -3
Query: 654 QISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTT---SFEEDNFIE 484
Q ELD T LL HL Y+++AD H+YSKDL +YLKYCKDVV+AGL S+EE N +E
Sbjct: 385 QKHELDCTGLLQHLHAIYNEIADTHEYSKDLPTYLKYCKDVVFAGLEPSLGSYEETNMME 444
Query: 483 QLWNLYETQEDIKPSVEPGTGCCFPKRSRDEGNTIDSTDCRQSTDGPITRMKLRTKGHRS 304
LW Y+ +E+ KPS + + ++ T R +G + + R K R
Sbjct: 445 ILWKHYQNEENTKPS----------ESEKQYHSSFSGTGSRD--EGCVGKTSKREKKKRK 492
Query: 303 LSMDDDINQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNF 124
DD N + P EA+RQ+K DME ++ Y+PP S + + GYV Y RK +G ++
Sbjct: 493 CLSDD--NPSGSLP--EAIRQLKLDMEENRFCYIPP-SVKQEKLGYVHYVRKKDKGALSY 547
Query: 123 VADADYYILLRTCARLTQI-DIRVMHLGALKLEKRLSWIEKR 1
VA ADYYILLR AR + DIR++H+G L LE+RL+W+EKR
Sbjct: 548 VAHADYYILLRAFARAAHVDDIRILHIGVLNLERRLAWLEKR 589
>gb|KEH29974.1| TATA box-binding protein associated factor RNA polymerase I subunit
B-like protein [Medicago truncatula]
Length = 660
Score = 163 bits (413), Expect = 1e-37
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 4/222 (1%)
Frame = -3
Query: 654 QISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTT---SFEEDNFIE 484
Q ELD T LL HL Y+++AD H+YSKDL +YLKYCKDVV+AGL S+EE N +E
Sbjct: 414 QKHELDCTGLLQHLHAIYNEIADTHEYSKDLPTYLKYCKDVVFAGLEPSLGSYEETNMME 473
Query: 483 QLWNLYETQEDIKPSVEPGTGCCFPKRSRDEGNTIDSTDCRQSTDGPITRMKLRTKGHRS 304
LW Y+ +E+ KPS + + ++ T R +G + + R K R
Sbjct: 474 ILWKHYQNEENTKPS----------ESEKQYHSSFSGTGSRD--EGCVGKTSKREKKKRK 521
Query: 303 LSMDDDINQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNF 124
DD N + P EA+RQ+K DME ++ Y+PP S + + GYV Y RK +G ++
Sbjct: 522 CLSDD--NPSGSLP--EAIRQLKLDMEENRFCYIPP-SVKQEKLGYVHYVRKKDKGALSY 576
Query: 123 VADADYYILLRTCARLTQI-DIRVMHLGALKLEKRLSWIEKR 1
VA ADYYILLR AR + DIR++H+G L LE+RL+W+EKR
Sbjct: 577 VAHADYYILLRAFARAAHVDDIRILHIGVLNLERRLAWLEKR 618
>ref|XP_007224504.1| hypothetical protein PRUPE_ppa023055mg, partial [Prunus persica]
gi|462421440|gb|EMJ25703.1| hypothetical protein
PRUPE_ppa023055mg, partial [Prunus persica]
Length = 677
Score = 163 bits (413), Expect = 1e-37
Identities = 97/247 (39%), Positives = 143/247 (57%), Gaps = 10/247 (4%)
Frame = -3
Query: 711 VDSCDTEMDRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDV 532
+D DTE+ R S + Q SELDA ELL LE ++++AD ++Y KDL +YL++CKDV
Sbjct: 426 LDDTDTELVRNLSNA----QNSELDAAELLSSLEAKHNEIADTYEYCKDLPTYLQFCKDV 481
Query: 531 VYAGLTTSFE---EDNFIEQLWNLYETQEDIKPSVEPGT---GCCFPKRSRDEGNTID-- 376
V+AG +SF+ E+ IE LWN Y++++D + ++E G KR RD +
Sbjct: 482 VFAGSKSSFKDHKEEELIELLWNFYQSRKDSETAIEQGLLWGETVNQKRVRDSNDISKEK 541
Query: 375 --STDCRQSTDGPITRMKLRTKGHRSLSMDDDINQTWMSPKEEALRQIKSDMELDKLHYL 202
S C S+ + +RT+ R+ + KEEA+ ++K DME + Y+
Sbjct: 542 KFSNKCPVSSPYSVAHRIVRTQKLRTQKLS----------KEEAIARMKLDMEEKRFFYI 591
Query: 201 PPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKR 22
PPR K R Y+ Y RK G + +V ADYYILLR CAR+ +++IR MH+ L E+R
Sbjct: 592 PPRVNLK-RFDYLHYARKKDEGAYTYVPHADYYILLRACARVAEVEIRCMHIAVLSFERR 650
Query: 21 LSWIEKR 1
L+W+EKR
Sbjct: 651 LAWMEKR 657
>ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phaseolus vulgaris]
gi|561004757|gb|ESW03751.1| hypothetical protein
PHAVU_011G039300g [Phaseolus vulgaris]
Length = 721
Score = 163 bits (412), Expect = 1e-37
Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 34/252 (13%)
Frame = -3
Query: 654 QISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF---EEDNFIE 484
Q ELD+ L+ HL+ Y+++ D+++Y+KDL +YLKYC+DVV+AGL S+ EE+N IE
Sbjct: 450 QKHELDSAWLIQHLQARYNEIGDINEYTKDLPTYLKYCRDVVFAGLEPSYGNHEEENMIE 509
Query: 483 QLWNLYETQEDIKPSVEPG-TGCCFPKRSRDEGNTIDSTDCRQSTDGPITRMKLRTKGHR 307
LWN Y+ +EDIKP G + ++S + ID T ++ K+R K
Sbjct: 510 YLWNFYQNEEDIKPLENVGQSNSSLNQKSLKDKECIDRTSKQE---------KIREKSFS 560
Query: 306 SL--------------SMDDDINQTWMSPKEE----------------ALRQIKSDMELD 217
L S+DD+ +Q S EE A+RQ+K DME +
Sbjct: 561 ELFPGDESCLEDDLSGSVDDNSSQESSSEGEEDSDSHDHSSGKSGVREAIRQMKLDMEEN 620
Query: 216 KLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGAL 37
+ Y+PP K K R Y+ Y RK G +VA ADYYILLR CAR+ IDIR++H+G L
Sbjct: 621 RFCYIPPSVKRK-RLDYIHYARKRDEGALTYVAHADYYILLRACARIALIDIRILHIGVL 679
Query: 36 KLEKRLSWIEKR 1
LE+RL ++E+R
Sbjct: 680 SLERRLDFLEER 691
>ref|XP_004507506.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Cicer arietinum]
Length = 718
Score = 163 bits (412), Expect = 1e-37
Identities = 101/256 (39%), Positives = 140/256 (54%), Gaps = 38/256 (14%)
Frame = -3
Query: 654 QISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF---EEDNFIE 484
Q ELD+T LL HL Y+++ +YSKDL +YLKYC+DVV+AGL S+ EE N ++
Sbjct: 437 QKPELDSTGLLQHLHAIYNEIEGTREYSKDLPTYLKYCRDVVFAGLEPSYGNHEEQNMMD 496
Query: 483 QLWNLYETQEDIKPSVEPGTGCCFPKRSRDEGNTIDSTDCRQSTDGPITRMKLRTKGHR- 307
LWN Y+ +E+ KP P+ + N+ + T R +G + R + K R
Sbjct: 497 NLWNFYQNEENSKP----------PELEKQHNNSFNQTGLRD--EGSVRRTPKKQKSKRK 544
Query: 306 -------------------SLSMDD-----------DINQ----TWMSPKEEALRQIKSD 229
SLS DD D N+ + S +EA+R++K D
Sbjct: 545 CFDEPSPDEDICLESDFPGSLSNDDSFESLPDDEDSDSNEGDKGSGNSVVKEAIRELKLD 604
Query: 228 MELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMH 49
ME ++ YLPP KSK + GYV Y RK +G +VA ADYYILLR CAR+ DIR++H
Sbjct: 605 MEENRFCYLPPNVKSK-KFGYVHYIRKKDKGALIYVAHADYYILLRACARVAHDDIRILH 663
Query: 48 LGALKLEKRLSWIEKR 1
+G L LE+RL+W+EKR
Sbjct: 664 IGVLSLERRLAWLEKR 679
>ref|XP_010086553.1| hypothetical protein L484_001445 [Morus notabilis]
gi|587829328|gb|EXB20252.1| hypothetical protein
L484_001445 [Morus notabilis]
Length = 761
Score = 162 bits (409), Expect = 3e-37
Identities = 104/268 (38%), Positives = 146/268 (54%), Gaps = 42/268 (15%)
Frame = -3
Query: 678 PSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFE- 502
P R +S Q +ELDA +LLC LE Y + + ++YSKDL SYL++CKDVV+AGL SFE
Sbjct: 460 PGRDTSHAQKTELDAAKLLCDLEARYRGINETYEYSKDLPSYLQFCKDVVFAGLEPSFED 519
Query: 501 --EDNFIEQLWNLYETQEDIKPSVEP---------------GTGC-CFP----KRSRDEG 388
E IE+LW+ Y ++ D K +V+ C FP KR RD+G
Sbjct: 520 YEEKRLIEELWDFYWSERDSKTAVQEEAHGSEAVTQKRARVDVECRSFPFKENKRFRDKG 579
Query: 387 -----------------NTIDSTDCRQSTDGPITRMKLRTKGH--RSLSMDDDINQTWMS 265
++ +S S D I+ K +T + + D ++T
Sbjct: 580 CVGDPSPYNGSRSAGDQHSENSDQFDSSQDDQISEQKDQTSADSLKDETADTLKDETSEI 639
Query: 264 PKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTC 85
K+EA+R +KSD E ++ +Y+PPR K R Y+ Y RK G +VA ADYYILLR C
Sbjct: 640 LKDEAIRLLKSDFEENRFYYIPPRVNPK-RFDYLHYARKKDEGALTYVAHADYYILLRAC 698
Query: 84 ARLTQIDIRVMHLGALKLEKRLSWIEKR 1
A+ +IDIR+MH+G L E+RL+WIE+R
Sbjct: 699 AKAAKIDIRLMHIGVLSFERRLAWIEQR 726
>ref|XP_008337501.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Malus domestica]
Length = 699
Score = 161 bits (407), Expect = 5e-37
Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Frame = -3
Query: 672 RSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAG---LTTSFE 502
R+SS Q SELDA ELL LE Y+++AD ++Y KDL +YL++CKDVV+AG L +
Sbjct: 440 RNSSNAQSSELDAAELLSSLEARYNEIADSYEYCKDLPTYLQFCKDVVFAGSKSLLNDEK 499
Query: 501 EDNFIEQLWNLYETQEDIKPSVEPGTGCCFPKRSRDEGNTIDSTDCRQSTDG-PITRMKL 325
E+ IE LW Y++ +D + + G F R ++ DS +C ++DG P
Sbjct: 500 EEELIESLWEFYQSGKDSETAAGKGL---FGDRDVEQKMLRDSDEC--ASDGTPFAGDHQ 554
Query: 324 RTK-GHRSLSMDDDINQTWMSP----KEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVC 160
R K G S + + + + + K+EA+R++K DME + Y+PPR K R Y+
Sbjct: 555 RNKTGDHSCASSQNSHGSGANDAETLKDEAIRRMKLDMEEKRFCYIPPRVNLK-RFDYLH 613
Query: 159 YTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
Y RK G + +VA ADYYILLR+CAR+ Q++IR MH+ L +E+RL+W+EKR
Sbjct: 614 YVRKKDEGAYTYVAHADYYILLRSCARVAQVEIRCMHIAVLSIERRLAWLEKR 666
>ref|XP_002522432.1| conserved hypothetical protein [Ricinus communis]
gi|223538317|gb|EEF39924.1| conserved hypothetical
protein [Ricinus communis]
Length = 751
Score = 161 bits (407), Expect = 5e-37
Identities = 95/254 (37%), Positives = 144/254 (56%), Gaps = 30/254 (11%)
Frame = -3
Query: 672 RSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS----F 505
R+ S +Q+ ELD+ ELL HLE Y+ +AD ++++KDL SYL+YCKDVV+AG S
Sbjct: 462 RNPSHMQMPELDSAELLHHLEVKYNFIADAYEFTKDLPSYLQYCKDVVFAGAGPSHMDDL 521
Query: 504 EEDNFIEQLWNLYETQEDIKPSVEPGTGCCF----PKRSRDEGNTID---------STDC 364
EE+ +E+LW+ Y+ ++D + + EP T KRSR++ ++ +
Sbjct: 522 EEEELMEKLWDFYQNEKDSELAKEPRTQSSSRLSNQKRSRNDDGSVFVNLSEKEKIKEEW 581
Query: 363 RQSTDGPITRMKLRTKGHRSLS----MDDDINQTWMSPKEE---------ALRQIKSDME 223
S I+ H+S ++ + + KE+ A+R++K DME
Sbjct: 582 HDSPSADISSHNADNSSHQSFDNGHFSNNSLEDQNVEHKEKDSEKTLEGRAIRRLKLDME 641
Query: 222 LDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLG 43
++ Y+PPR K R Y+ Y RK G + +VA ADYYILLR CAR+ Q+DIR+MH+G
Sbjct: 642 ENRFCYIPPRVNLK-RFDYLHYVRKKDEGAFTYVAHADYYILLRACARVAQVDIRIMHIG 700
Query: 42 ALKLEKRLSWIEKR 1
L E+RL+W+EKR
Sbjct: 701 VLSFERRLAWLEKR 714
>ref|XP_010044748.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Eucalyptus grandis]
Length = 730
Score = 157 bits (398), Expect = 6e-36
Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 29/274 (10%)
Frame = -3
Query: 735 DVKEFDPIVDSCDTEMDRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLS 556
DV+ ++D + + +S SE DA ELL +L ++ D ++Y KDL +
Sbjct: 431 DVENGSGFFSGAGDDLDTRLEKEASDGDQSEFDAKELLRNLNARFNDFNDSYEYCKDLPT 490
Query: 555 YLKYCKDVVYAGLTTS---FEEDNFIEQLWNLYETQEDIKPSVEPGT---GCCFPKRSRD 394
YL+YCKD+V+AGL S +EE ++QLWN Y+ +D + + PG G KR RD
Sbjct: 491 YLQYCKDIVFAGLEPSCEVYEEGEVMKQLWNFYQENKDGEQTERPGLHFDGAFNQKRPRD 550
Query: 393 EGN-----------------------TIDSTDCRQSTDGPITRMKLRTKGHRSLSMDDDI 283
N +DSTD S+ + ++ H S
Sbjct: 551 NVNGCSKNSFIGNKRLNSGTSNANESLLDSTDDDASSQSSLADDNMKPSNHPSSE----- 605
Query: 282 NQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYY 103
S ++ A+RQ+K DME ++ Y+PPR K K R Y+ Y RK G +VA ADYY
Sbjct: 606 -----SYQDRAIRQLKLDMEENRFFYIPPRVKVK-RLDYLHYVRKRDHGALAYVAHADYY 659
Query: 102 ILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
ILLR CAR+ Q++IR MH+G L E+RL+W+E R
Sbjct: 660 ILLRACARVAQVEIRCMHMGVLNFERRLAWMENR 693
>gb|KCW86852.1| hypothetical protein EUGRSUZ_B03445 [Eucalyptus grandis]
Length = 720
Score = 157 bits (398), Expect = 6e-36
Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 29/274 (10%)
Frame = -3
Query: 735 DVKEFDPIVDSCDTEMDRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLS 556
DV+ ++D + + +S SE DA ELL +L ++ D ++Y KDL +
Sbjct: 421 DVENGSGFFSGAGDDLDTRLEKEASDGDQSEFDAKELLRNLNARFNDFNDSYEYCKDLPT 480
Query: 555 YLKYCKDVVYAGLTTS---FEEDNFIEQLWNLYETQEDIKPSVEPGT---GCCFPKRSRD 394
YL+YCKD+V+AGL S +EE ++QLWN Y+ +D + + PG G KR RD
Sbjct: 481 YLQYCKDIVFAGLEPSCEVYEEGEVMKQLWNFYQENKDGEQTERPGLHFDGAFNQKRPRD 540
Query: 393 EGN-----------------------TIDSTDCRQSTDGPITRMKLRTKGHRSLSMDDDI 283
N +DSTD S+ + ++ H S
Sbjct: 541 NVNGCSKNSFIGNKRLNSGTSNANESLLDSTDDDASSQSSLADDNMKPSNHPSSE----- 595
Query: 282 NQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYY 103
S ++ A+RQ+K DME ++ Y+PPR K K R Y+ Y RK G +VA ADYY
Sbjct: 596 -----SYQDRAIRQLKLDMEENRFFYIPPRVKVK-RLDYLHYVRKRDHGALAYVAHADYY 649
Query: 102 ILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
ILLR CAR+ Q++IR MH+G L E+RL+W+E R
Sbjct: 650 ILLRACARVAQVEIRCMHMGVLNFERRLAWMENR 683
>ref|XP_009371111.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B [Pyrus x bretschneideri]
gi|694391140|ref|XP_009371112.1| PREDICTED: TATA
box-binding protein-associated factor RNA polymerase I
subunit B [Pyrus x bretschneideri]
Length = 699
Score = 157 bits (396), Expect = 1e-35
Identities = 94/233 (40%), Positives = 140/233 (60%), Gaps = 9/233 (3%)
Frame = -3
Query: 672 RSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF---E 502
R+SS Q SELDA ELL LE Y+++AD ++Y KDL +YL++CKDVV+AG +S +
Sbjct: 440 RNSSNAQSSELDAAELLSGLEARYNEIADSYEYCKDLPTYLQFCKDVVFAGSKSSLNDEK 499
Query: 501 EDNFIEQLWNLYETQEDIKPSVEPGTGCCFPKRSRDEGNTIDSTDCRQSTDG-PITRMKL 325
E+ IE LW Y++ ++ + + G F R ++ DS +C ++DG P +
Sbjct: 500 EEELIESLWEFYQSGKNSETAAGKGL---FGDRDVEQKRLRDSDEC--ASDGTPFSGDHQ 554
Query: 324 RTK-GHRSLSMDDDINQTWMSP----KEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVC 160
K G S + + + + K+EA+R++K DME + Y+PPR K R Y+
Sbjct: 555 GNKTGDHSCASSQNSQCSGANDADTLKDEAIRRMKLDMEEKRFCYIPPRVNLK-RFDYLH 613
Query: 159 YTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRLSWIEKR 1
Y RK G + +VA ADYYILLR CAR+ Q++IR MH+ L +E+RL+W+EKR
Sbjct: 614 YVRKKDEGAYTYVAHADYYILLRACARVAQVEIRCMHIAVLSIERRLAWLEKR 666
>ref|XP_009800662.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B isoform X2 [Nicotiana sylvestris]
Length = 701
Score = 155 bits (393), Expect = 2e-35
Identities = 100/260 (38%), Positives = 141/260 (54%), Gaps = 31/260 (11%)
Frame = -3
Query: 687 DRKPSRSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS 508
D P+ S + S+ DA ELL LE YD+L+D +D+SKDL SYL+YCKDVV+AGL S
Sbjct: 426 DSDPNYSMPDVNESDFDALELLKILEAKYDELSDTYDFSKDLQSYLQYCKDVVFAGLEPS 485
Query: 507 F---EEDNFIEQLWNLYETQEDIKPS----VEPGTGCCFPKRSRDEGNTIDSTDCRQSTD 349
+ EE+ IE LW+ Y++ + + S VEP T C + + ST R S
Sbjct: 486 YEDHEEERIIEDLWDFYQSHKAEEASDDEKVEPHT--CNGFQHKGSRGVCKSTP-RSSKK 542
Query: 348 GPITRMKLRTKGHRSLSMDDD-----------INQTWMSP-------------KEEALRQ 241
+ R K +S+DDD + + SP KE ALRQ
Sbjct: 543 FSVNRCKC------DISLDDDNFNAANCSECGLERKAYSPNKGHGDRPSAESRKETALRQ 596
Query: 240 IKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDI 61
+K +M+ ++ Y+PPR K ++GY+ Y RK G + + ADYYILLR+CA++ Q+D
Sbjct: 597 LKENMQENRFCYVPPRKYVKKKNGYIRYARK-KDGAYIYATHADYYILLRSCAKVAQVDA 655
Query: 60 RVMHLGALKLEKRLSWIEKR 1
R MH+G L E+RL +EKR
Sbjct: 656 RTMHVGVLSFERRLEMLEKR 675
>ref|XP_009391050.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 740
Score = 155 bits (392), Expect = 3e-35
Identities = 90/241 (37%), Positives = 133/241 (55%), Gaps = 17/241 (7%)
Frame = -3
Query: 672 RSSSPIQISELDATELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDN 493
++ S I+ ++ + ELL L+ A+DK++ HDYS+DL SYLKYC+DVV+ G+TTS++E
Sbjct: 483 KNMSSIKSADFNTKELLDILQAAHDKISTAHDYSRDLRSYLKYCQDVVFGGMTTSYDEQT 542
Query: 492 FIEQLWNLYETQED------IKPSVEPGTG---------CCFPKRSRDEGNTIDSTDCRQ 358
IE+ W Y+ QED +K + G F + R++ + +
Sbjct: 543 LIERFWETYDKQEDDIQQEGLKDELLDSKGKRQREVPATSFFDFKRREQSKSSQHIIRER 602
Query: 357 STD--GPITRMKLRTKGHRSLSMDDDINQTWMSPKEEALRQIKSDMELDKLHYLPPRSKS 184
S D G T D N + + A+ ++K ME +YLPPR +
Sbjct: 603 SPDDYGGTTSRDGFANSADPNEKDPLCNSSLTPSRNAAVERMKLSMEESGFYYLPPRVQ- 661
Query: 183 KNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIRVMHLGALKLEKRLSWIEK 4
K GY+ Y RK + GK VA ADYYI+LR CA++ Q+D+R+MHLG LK E+RL+WIE+
Sbjct: 662 KRTDGYLHYKRKRLDGKLICVAHADYYIVLRACAKVAQVDMRMMHLGVLKFERRLAWIEQ 721
Query: 3 R 1
R
Sbjct: 722 R 722