BLASTX nr result

ID: Cinnamomum24_contig00017794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00017794
         (858 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010920468.1| PREDICTED: cryptochrome-1 isoform X1 [Elaeis...    58   9e-07
ref|XP_010920471.1| PREDICTED: cryptochrome-1 isoform X2 [Elaeis...    58   9e-07
ref|XP_010920472.1| PREDICTED: cryptochrome-1 isoform X3 [Elaeis...    58   9e-07
ref|XP_008791585.1| PREDICTED: cryptochrome-1 [Phoenix dactylife...    56   6e-06

>ref|XP_010920468.1| PREDICTED: cryptochrome-1 isoform X1 [Elaeis guineensis]
           gi|743780279|ref|XP_010920469.1| PREDICTED:
           cryptochrome-1 isoform X1 [Elaeis guineensis]
           gi|743780282|ref|XP_010920470.1| PREDICTED:
           cryptochrome-1 isoform X1 [Elaeis guineensis]
          Length = 669

 Score = 58.2 bits (139), Expect(2) = 9e-07
 Identities = 36/77 (46%), Positives = 41/77 (53%)
 Frame = -1

Query: 855 SRKDEDLCSTAESSAVRKRSISESQCVVPPSFSSSSNGKYAVPLSASPSNGNRANEGDCS 676
           S+ DEDLCSTAESSA RKRSISES C VP S               S S  N +++G  S
Sbjct: 578 SKMDEDLCSTAESSAARKRSISESMCPVPNS-------------CFSLSEVNHSHDGGSS 624

Query: 675 NLDVQIESSSKRPWKEQ 625
                  S S  PWKE+
Sbjct: 625 KPHNSSGSPSMHPWKEE 641



 Score = 22.7 bits (47), Expect(2) = 9e-07
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 601 KEEEADLEVFKLLKSMRPCKGP 536
           ++E  D++    +K +RPCK P
Sbjct: 647 EKEGDDVDAQSSIKGLRPCKRP 668


>ref|XP_010920471.1| PREDICTED: cryptochrome-1 isoform X2 [Elaeis guineensis]
          Length = 667

 Score = 58.2 bits (139), Expect(2) = 9e-07
 Identities = 36/77 (46%), Positives = 41/77 (53%)
 Frame = -1

Query: 855 SRKDEDLCSTAESSAVRKRSISESQCVVPPSFSSSSNGKYAVPLSASPSNGNRANEGDCS 676
           S+ DEDLCSTAESSA RKRSISES C VP S               S S  N +++G  S
Sbjct: 576 SKMDEDLCSTAESSAARKRSISESMCPVPNS-------------CFSLSEVNHSHDGGSS 622

Query: 675 NLDVQIESSSKRPWKEQ 625
                  S S  PWKE+
Sbjct: 623 KPHNSSGSPSMHPWKEE 639



 Score = 22.7 bits (47), Expect(2) = 9e-07
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 601 KEEEADLEVFKLLKSMRPCKGP 536
           ++E  D++    +K +RPCK P
Sbjct: 645 EKEGDDVDAQSSIKGLRPCKRP 666


>ref|XP_010920472.1| PREDICTED: cryptochrome-1 isoform X3 [Elaeis guineensis]
          Length = 604

 Score = 58.2 bits (139), Expect(2) = 9e-07
 Identities = 36/77 (46%), Positives = 41/77 (53%)
 Frame = -1

Query: 855 SRKDEDLCSTAESSAVRKRSISESQCVVPPSFSSSSNGKYAVPLSASPSNGNRANEGDCS 676
           S+ DEDLCSTAESSA RKRSISES C VP S               S S  N +++G  S
Sbjct: 513 SKMDEDLCSTAESSAARKRSISESMCPVPNS-------------CFSLSEVNHSHDGGSS 559

Query: 675 NLDVQIESSSKRPWKEQ 625
                  S S  PWKE+
Sbjct: 560 KPHNSSGSPSMHPWKEE 576



 Score = 22.7 bits (47), Expect(2) = 9e-07
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 601 KEEEADLEVFKLLKSMRPCKGP 536
           ++E  D++    +K +RPCK P
Sbjct: 582 EKEGDDVDAQSSIKGLRPCKRP 603


>ref|XP_008791585.1| PREDICTED: cryptochrome-1 [Phoenix dactylifera]
           gi|672135822|ref|XP_008791587.1| PREDICTED:
           cryptochrome-1 [Phoenix dactylifera]
           gi|672135824|ref|XP_008791588.1| PREDICTED:
           cryptochrome-1 [Phoenix dactylifera]
           gi|672135826|ref|XP_008791589.1| PREDICTED:
           cryptochrome-1 [Phoenix dactylifera]
           gi|672135828|ref|XP_008791590.1| PREDICTED:
           cryptochrome-1 [Phoenix dactylifera]
          Length = 667

 Score = 55.8 bits (133), Expect(2) = 6e-06
 Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -1

Query: 855 SRKDEDLCSTAESSAVRKRSISESQCVVPPS-FSSSSNGKYAVPLSASPSNGNRANEGDC 679
           S+KD+DLCSTAESSA RKRSIS S C VP S FS S         S  P N +       
Sbjct: 576 SKKDKDLCSTAESSAARKRSISGSMCAVPDSCFSLSEVNTLDDSGSFKPHNSS------- 628

Query: 678 SNLDVQIESSSKRPWKEQSTQKGFK 604
                   S S  PWKE+   +G K
Sbjct: 629 -------GSPSMHPWKEEDGIRGEK 646



 Score = 22.3 bits (46), Expect(2) = 6e-06
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -3

Query: 622 DTERIQMKEEEADLEVFKLLKSMRPCKGP 536
           + + I+ ++E  D++    ++ +RPCK P
Sbjct: 638 EEDGIRGEKEGDDVDAQSSIEGLRPCKRP 666


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