BLASTX nr result

ID: Cinnamomum24_contig00017541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00017541
         (1609 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA78966.1| pollen preferential protein [Lilium longiflorum]...    72   1e-09
ref|XP_008778376.1| PREDICTED: uncharacterized protein LOC103698...    69   1e-08

>emb|CAA78966.1| pollen preferential protein [Lilium longiflorum]
           gi|19455|emb|CAA78977.1| pollen preferential protein
           [Lilium longiflorum] gi|308904|gb|AAA33399.1| pollen
           preferential protein [Lilium longiflorum]
          Length = 182

 Score = 72.4 bits (176), Expect = 1e-09
 Identities = 39/103 (37%), Positives = 55/103 (53%)
 Frame = -3

Query: 527 LLSLIVLAVVRLPAGLCXXXXXXXXXXXXXXKTMMLCSLQQPKGYEDAELQMDEMEQREI 348
           ++ L+VLA V+LPAGLC              ++  L S       +D +  +     R  
Sbjct: 85  IVGLLVLATVKLPAGLCRRALSQKRRKRVKKRSTTLRSRAMSFVSDDEDFGVPSFVPR-- 142

Query: 347 SPIISPGRWPDKSPSVVVSEMEKDMWAKLYGTGFWRNPSEKES 219
               +P  WP KSPSV V+E E++MWA+ Y  GFWR+PS+KES
Sbjct: 143 ----TPETWPSKSPSVEVAEKEEEMWAEFYSAGFWRSPSQKES 181


>ref|XP_008778376.1| PREDICTED: uncharacterized protein LOC103698166, partial [Phoenix
           dactylifera]
          Length = 207

 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -3

Query: 527 LLSLIVLAVVRLPAGLCXXXXXXXXXXXXXXKTMMLCSLQ-QPKGYEDAELQMDEMEQRE 351
           LL+L+V  VVRLPAGLC              K      L     G E  E +   +    
Sbjct: 96  LLNLLVFTVVRLPAGLCQRALKARAKRRAVIKRRKAGKLGLNSAGGEGEEQEGLGLHGAV 155

Query: 350 ISPIISPGRWPDKSPSVVVSEMEKDMWAKLYGTGFWRNPSEKE 222
           ++  ++   WP K PS  V+EMEK+MWAK Y  GFWR+PS++E
Sbjct: 156 VAVAVAGEAWPAKPPSEEVTEMEKEMWAKFYSAGFWRSPSQRE 198


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