BLASTX nr result

ID: Cinnamomum24_contig00016648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00016648
         (283 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase ...    61   3e-07

>ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 393

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
 Frame = +1

Query: 1   NPKPDVDPAA----RNYQSGFSRPGDRNWFAPPRXXXXXXXXXCD--------PIGLGLV 144
           N K DVDPAA    RNY++ F R     W  P            D        P+ +GL+
Sbjct: 44  NQKSDVDPAAAAAARNYRADFKRSPTGCW--PKASASLYNSLSGDFVSDNCSSPLVMGLI 101

Query: 145 SIMKXXXXXXXXXXXXXVFGISSSTMTGFTPSGLLPFFQGMKWLPC 282
           S+MK             +FGISSS++ GF  S LL FFQG KWLPC
Sbjct: 102 SMMKSSACVSGSAGMG-IFGISSSSVLGFKASSLLTFFQGTKWLPC 146