BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00015308
         (1693 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ...   590   e-166
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              535   e-149
ref|XP_010915290.1| PREDICTED: MMS19 nucleotide excision repair ...   528   e-147
ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair ...   527   e-147
ref|XP_010915313.1| PREDICTED: MMS19 nucleotide excision repair ...   518   e-144
ref|XP_011011444.1| PREDICTED: uncharacterized protein LOC105116...   497   e-137
ref|XP_011011445.1| PREDICTED: uncharacterized protein LOC105116...   495   e-137
ref|XP_007024314.1| MMS19 nucleotide excision repair protein, pu...   491   e-136
ref|XP_007024313.1| MMS19 nucleotide excision repair protein, pu...   491   e-136
ref|XP_007024312.1| MMS19 nucleotide excision repair protein, pu...   491   e-136
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   491   e-136
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   488   e-135
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   487   e-134
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   487   e-134
gb|KDO51790.1| hypothetical protein CISIN_1g001284mg [Citrus sin...   486   e-134
gb|KDO51789.1| hypothetical protein CISIN_1g001284mg [Citrus sin...   486   e-134
ref|XP_012451237.1| PREDICTED: MMS19 nucleotide excision repair ...   483   e-133
gb|KJB68183.1| hypothetical protein B456_010G230600 [Gossypium r...   483   e-133
ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair ...   483   e-133
ref|XP_012451236.1| PREDICTED: MMS19 nucleotide excision repair ...   483   e-133

>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Nelumbo
            nucifera] gi|719979495|ref|XP_010249498.1| PREDICTED:
            MMS19 nucleotide excision repair protein homolog [Nelumbo
            nucifera]
          Length = 1160

 Score =  590 bits (1522), Expect = e-166
 Identities = 307/564 (54%), Positives = 398/564 (70%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++VG V+ +DAR++ +SYL+NLQVQSLA HDR +CFELLECLL+ Y+DAVA LGDD
Sbjct: 113  LRRKSSVGMVSGSDARLVGQSYLQNLQVQSLAQHDRMLCFELLECLLDRYSDAVAALGDD 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            LVYGIC AID EKDP+CL+LTFH+VEVL  +F +P G ++SFAGD+F+IL  YFPI+FTH
Sbjct: 173  LVYGICEAIDGEKDPRCLMLTFHLVEVLAWLFPEPSGPLASFAGDIFEILGCYFPIHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             + DD  +KRDDLSRALM AF+S+PLFEPF IP                      +C L 
Sbjct: 233  QQGDDFDIKRDDLSRALMLAFSSSPLFEPFAIPLLLEKLSSSLPLAKVDSFRYLSHCVLK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+ KHAKAIWSSLK+AI TFS Q   F LA + P  M  +EN++  EAL+CLE+++
Sbjct: 293  YGVDRMGKHAKAIWSSLKDAIFTFSLQGNIFSLASDLPDTMGFEENDITKEALICLEKVI 352

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            +Q D +    F++ IV+DED+EMI RSVT    Y  L+ E KQKL A G I+ VSA++SS
Sbjct: 353  LQNDGI----FLSLIVDDEDVEMILRSVTISNSYNSLSVESKQKLLAFGRIIVVSAKISS 408

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            SSC+++F   F RL++ILG+SS S S++     S V    LNFGA+YLC  LL ACRDL 
Sbjct: 409  SSCDRIFHFLFPRLMDILGLSSSSLSLECIPYGSPVSFGQLNFGAIYLCTELLAACRDLI 468

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
            VG ++  P    ++  WCCLLQ FSG L  FL S+L+     +      +SGVKGL+TLA
Sbjct: 469  VGSEDIAPQSVLMQVSWCCLLQRFSGPLTTFLSSSLVTSMKQENCDANIYSGVKGLRTLA 528

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFPG  +PISK+I E +LT+F+SI+T  C            L+QIGTF E  +D+E+ TS
Sbjct: 529  TFPGWFLPISKSIFENILTVFMSILTAGCEETLLWKLSLKALVQIGTFTEKFHDSERATS 588

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y NI+VG+  S +SLDDS MP  LKL+A+  IG +G+ +M+++IQGLEEAISANF +AS 
Sbjct: 589  YMNIVVGKIVSSISLDDSSMPYSLKLDAIAEIGGSGMHFMLKVIQGLEEAISANFFEASS 648

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
            +GN+KSVE+LI LLE +S +VLPW
Sbjct: 649  KGNLKSVEVLIPLLECFSKKVLPW 672


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  535 bits (1379), Expect = e-149
 Identities = 281/563 (49%), Positives = 372/563 (66%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            ++R +N+G VT  DAR + ++YLEN+QVQSL  HDRK+CFE+LECLL+HY ++VA LGDD
Sbjct: 113  MKRKSNMGRVTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILECLLDHYPESVASLGDD 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            LVYGIC AID EKDP+CL+LTFHIVE+L R+F DP G ++SFAGDLFDIL  YFPI+FTH
Sbjct: 173  LVYGICGAIDGEKDPRCLMLTFHIVEILARLFPDPSGPLASFAGDLFDILGCYFPIHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            P+ +D+ VKRDDLSRALM AF+ST LFEPF IP                       C L 
Sbjct: 233  PQGEDVDVKRDDLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLPLAKVDSLKYLSNCLLK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+ KH +AIW S+K+AI   S Q+    LA E    +  QENE+  EA++ L++++
Sbjct: 293  YGDDRMTKHVEAIWFSVKDAIFC-SEQEPMLSLASELLDHVGFQENEIVTEAIILLQKVI 351

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            ++   LS    ++ IV D+DI  I  +VT    Y D+  + K KL A+G IL+VSA+ S 
Sbjct: 352  LENSGLS----LSLIVGDKDINTIVNTVTSFRSYNDIPLQSKHKLCAIGRILYVSAKASI 407

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            + CN+VF+ FF RL++ LG+S R+ S D   N  YVF E LNFGALYLC+ LL ACRDL 
Sbjct: 408  TCCNRVFESFFFRLMDTLGLSVRNSSGDCLPNFDYVFSERLNFGALYLCIELLAACRDLV 467

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
            VG +E        ++ WCC+L +FS  L     S L A    D  +   +SGVKGLQ LA
Sbjct: 468  VGSEELTSKSVSAQESWCCMLHSFSSLLMKAFSSVLDASTDKDAYEADIYSGVKGLQILA 527

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFPG  +PISK+I E VL  F+SII                L+QIG+FI+  +++EK  S
Sbjct: 528  TFPGEFLPISKSIFENVLLTFISIIVEDFNKTLLWKLALKALVQIGSFIDRFHESEKALS 587

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y  I+V +  SL+ LDD G+P  L+LEA++ IGTTGL+ M++++QGLE+AI AN  +  V
Sbjct: 588  YNYIVVEKIVSLMFLDDFGLPFQLRLEAISDIGTTGLNVMLKIVQGLEDAIFANLSEVYV 647

Query: 73   EGNVKSVEILIYLLEYYSGQVLP 5
             GN+KS +I + LLE YS ++LP
Sbjct: 648  HGNLKSAKIAVQLLECYSNKLLP 670


>ref|XP_010915290.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Elaeis guineensis] gi|743756137|ref|XP_010915298.1|
            PREDICTED: MMS19 nucleotide excision repair protein
            homolog isoform X1 [Elaeis guineensis]
            gi|743756139|ref|XP_010915305.1| PREDICTED: MMS19
            nucleotide excision repair protein homolog isoform X1
            [Elaeis guineensis]
          Length = 1078

 Score =  528 bits (1361), Expect = e-147
 Identities = 286/569 (50%), Positives = 374/569 (65%), Gaps = 5/569 (0%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR  NVG V  ++AR + +SYL N+QVQSLA+HDRK+CFE+L+CLLE Y +AV  LGDD
Sbjct: 38   LRRKKNVGMVKSSEARAVAESYLMNVQVQSLAVHDRKLCFEVLQCLLEVYPEAVEMLGDD 97

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            LVYGIC AIDEEKDP+CL+LTFH+VE+L RVF D  GS++SFAGDLFDILSRYFPIYFTH
Sbjct: 98   LVYGICEAIDEEKDPRCLMLTFHLVEILARVFPDSSGSVASFAGDLFDILSRYFPIYFTH 157

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            P++DD+ + R++LS ALMHAF STP FEPF IP                       C  H
Sbjct: 158  PRSDDLDITREELSMALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQH 217

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+ KHAKAIWS+LK+ I   SP  T F  + E   +M S+EN++A EAL+CL+  +
Sbjct: 218  YGTDRMIKHAKAIWSNLKDVILNHSPHKTLFSTS-ELAGNMESEENQIAKEALICLQTAI 276

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            + LDSL     ++FIVEDEDIEM F  V+       ++ E ++ L A+GNIL VS++ S 
Sbjct: 277  LHLDSLEKNPILSFIVEDEDIEMKFGLVSNEGTGTGISIESRRHLSAVGNILSVSSKASM 336

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            S C +VFQ FF RL+ IL IS+ S S   N N+       LNFGALYLC+ LL + R+L 
Sbjct: 337  SGCTRVFQKFFPRLMNILEISASSSSNGCNTNNG---TSSLNFGALYLCIQLLASFRELI 393

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGS-----HDTEKDYFFSGVKG 449
            +  ++  P    V+D W C+LQ+FSG LA  LGS L+   S     ++T  ++    VKG
Sbjct: 394  LTSQDFSPQVITVQDGWWCMLQHFSGPLAHALGSALMGARSSELVNNNTGHEHAIYEVKG 453

Query: 448  LQTLATFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDT 269
            LQ LATFPG  +P S+ + E +L +F+SI T R             LI+IG+FIE  +D+
Sbjct: 454  LQVLATFPGCYLPTSEDVYEYILVIFMSIATERFEDAFLWKLSVKALIEIGSFIEKYHDS 513

Query: 268  EKRTSYKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANF 89
             +  S+  I+V    SL   DDS MPL LKL+A++ IGT G+DYM R+I+ LEEAI + F
Sbjct: 514  YRGISFNRIVVERIVSLFQQDDSTMPLALKLDAISEIGTIGVDYMSRVIKLLEEAILSKF 573

Query: 88   VKASVEGNVKSVEILIYLLEYYSGQVLPW 2
            +   VEG +++ EIL+ LLE YS +VL W
Sbjct: 574  LAVCVEGRLEAAEILVPLLECYSNRVLLW 602


>ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix
            dactylifera]
          Length = 1153

 Score =  527 bits (1358), Expect = e-147
 Identities = 283/569 (49%), Positives = 372/569 (65%), Gaps = 5/569 (0%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR  NVG V  ++AR L +SYL N+QVQSLA+HDRK+CFE+L+CLLE Y +AV  LGDD
Sbjct: 113  LRRKKNVGMVKSSEARALAESYLTNVQVQSLAVHDRKLCFEVLQCLLEAYPEAVEMLGDD 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            LVYGIC AIDEEKDP+CL+LTFH+VE+L RVF D  G+++SFAGDLFDILSRYFPIYFTH
Sbjct: 173  LVYGICEAIDEEKDPRCLMLTFHLVEILARVFPDSSGAVASFAGDLFDILSRYFPIYFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            P++DD  + R+DLSRALMHAF STP FEPF IP                       C  H
Sbjct: 233  PRSDDFDITREDLSRALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQH 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+ KHA AIWS+LK+AI   SP  T      E+  +  S+EN++A EAL+CL+  +
Sbjct: 293  YGTDRMIKHAGAIWSNLKDAIFNHSPHKT-LSSTSEAAGNTESEENQIAKEALICLQTAI 351

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            + LDSL     ++ IVEDEDIEM F  V+       ++ E +++L A+GNIL VS++ S 
Sbjct: 352  LHLDSLEKDPILSLIVEDEDIEMKFGLVSNEGTCTGISIESRRQLSAVGNILSVSSKASM 411

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            S C +VFQ FF  L+ IL +S+ S S   N  +       LNFGALYLC+ LL +CR+LT
Sbjct: 412  SGCTRVFQKFFPHLMNILEVSASSSSYGCNTKNR---TSSLNFGALYLCIQLLASCRELT 468

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACG-----SHDTEKDYFFSGVKG 449
            +  ++  P    V+D W  +LQ+FSG L   LGS L+A G     S++T  ++    VKG
Sbjct: 469  LTSQDFSPQVTTVQDIWWSMLQHFSGPLVHALGSALVAVGSSELVSNNTGHEHAIYEVKG 528

Query: 448  LQTLATFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDT 269
            LQ LA FPG  +PIS+ + E +L + VS++T R             LI+IG+FIE  +D+
Sbjct: 529  LQVLAMFPGCYLPISEDVYEYILVILVSMVTERFEDTFLWKLSVKALIEIGSFIEKHHDS 588

Query: 268  EKRTSYKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANF 89
             +  S+  I+V    SL   DDS MPL LKL+A++ IGT G+DYM R+I+ LEEAI + F
Sbjct: 589  YRGISFNRIVVERIVSLFQHDDSTMPLALKLDAISEIGTIGVDYMSRVIRLLEEAILSKF 648

Query: 88   VKASVEGNVKSVEILIYLLEYYSGQVLPW 2
            +   VEG +++ EIL+ LLE YS +VL W
Sbjct: 649  LAVCVEGCLEAAEILVPLLECYSNRVLAW 677


>ref|XP_010915313.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Elaeis guineensis]
          Length = 1033

 Score =  518 bits (1333), Expect = e-144
 Identities = 280/560 (50%), Positives = 368/560 (65%), Gaps = 5/560 (0%)
 Frame = -1

Query: 1666 VTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAAI 1487
            V  ++AR + +SYL N+QVQSLA+HDRK+CFE+L+CLLE Y +AV  LGDDLVYGIC AI
Sbjct: 2    VKSSEARAVAESYLMNVQVQSLAVHDRKLCFEVLQCLLEVYPEAVEMLGDDLVYGICEAI 61

Query: 1486 DEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHVK 1307
            DEEKDP+CL+LTFH+VE+L RVF D  GS++SFAGDLFDILSRYFPIYFTHP++DD+ + 
Sbjct: 62   DEEKDPRCLMLTFHLVEILARVFPDSSGSVASFAGDLFDILSRYFPIYFTHPRSDDLDIT 121

Query: 1306 RDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLHYGADRIAKH 1127
            R++LS ALMHAF STP FEPF IP                       C  HYG DR+ KH
Sbjct: 122  REELSMALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMIKH 181

Query: 1126 AKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSGY 947
            AKAIWS+LK+ I   SP  T F  + E   +M S+EN++A EAL+CL+  ++ LDSL   
Sbjct: 182  AKAIWSNLKDVILNHSPHKTLFSTS-ELAGNMESEENQIAKEALICLQTAILHLDSLEKN 240

Query: 946  SFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSSSSCNKVFQG 767
              ++FIVEDEDIEM F  V+       ++ E ++ L A+GNIL VS++ S S C +VFQ 
Sbjct: 241  PILSFIVEDEDIEMKFGLVSNEGTGTGISIESRRHLSAVGNILSVSSKASMSGCTRVFQK 300

Query: 766  FFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLTVGFKETKPY 587
            FF RL+ IL IS+ S S   N N+       LNFGALYLC+ LL + R+L +  ++  P 
Sbjct: 301  FFPRLMNILEISASSSSNGCNTNNG---TSSLNFGALYLCIQLLASFRELILTSQDFSPQ 357

Query: 586  YPQVEDFWCCLLQNFSGSLADFLGSTLIACGS-----HDTEKDYFFSGVKGLQTLATFPG 422
               V+D W C+LQ+FSG LA  LGS L+   S     ++T  ++    VKGLQ LATFPG
Sbjct: 358  VITVQDGWWCMLQHFSGPLAHALGSALMGARSSELVNNNTGHEHAIYEVKGLQVLATFPG 417

Query: 421  SSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTSYKNI 242
              +P S+ + E +L +F+SI T R             LI+IG+FIE  +D+ +  S+  I
Sbjct: 418  CYLPTSEDVYEYILVIFMSIATERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGISFNRI 477

Query: 241  IVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASVEGNV 62
            +V    SL   DDS MPL LKL+A++ IGT G+DYM R+I+ LEEAI + F+   VEG +
Sbjct: 478  VVERIVSLFQQDDSTMPLALKLDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVCVEGRL 537

Query: 61   KSVEILIYLLEYYSGQVLPW 2
            ++ EIL+ LLE YS +VL W
Sbjct: 538  EAAEILVPLLECYSNRVLLW 557


>ref|XP_011011444.1| PREDICTED: uncharacterized protein LOC105116012 isoform X1 [Populus
            euphratica]
          Length = 1148

 Score =  497 bits (1279), Expect = e-137
 Identities = 271/560 (48%), Positives = 362/560 (64%), Gaps = 3/560 (0%)
 Frame = -1

Query: 1672 GTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICA 1493
            G VT +DA+ + +S+L+NLQVQSL  HDRK+CFEL+ECLLE+Y  AVA LGDDL+YGIC 
Sbjct: 119  GMVTSSDAKGVAESFLQNLQVQSLGQHDRKLCFELMECLLEYYPLAVASLGDDLIYGICE 178

Query: 1492 AIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPK-NDDI 1316
            AID EKDPQCL+L FHI+EVLV+VF +P   I SFA DLF ILS YFPI+FTH K  +D+
Sbjct: 179  AIDGEKDPQCLMLAFHIMEVLVQVFPEPCSPIESFASDLFGILSSYFPIHFTHAKAEEDV 238

Query: 1315 HVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLHYGADRI 1136
             VKRDDLSRALM AF+S+PLFEP VIP                      YCT  YGA+RI
Sbjct: 239  EVKRDDLSRALMLAFSSSPLFEPSVIPLLLEKLSSSLSSAKVDSLKYLSYCTSKYGAERI 298

Query: 1135 AKHAKAIWSSLKEAICTFSPQDTSFLLAF--ESPKDMRSQENEVAAEALVCLERIMVQLD 962
            AKHA AIWSSLK+AI T      SF+L+F  ES   +  QENE+AAEAL  LE++++Q  
Sbjct: 299  AKHAGAIWSSLKDAIFT---SGQSFVLSFTPESLGGLGCQENEIAAEALALLEKVVIQNS 355

Query: 961  SLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSSSSCN 782
            +L    F + IV DE+I M+  S+TG     ++  +  QKL+++G IL+VS + S +SC+
Sbjct: 356  NL----FSSMIVGDEEINMVLNSITGYQSCNEIPLQSTQKLYSVGRILYVSVKASVASCS 411

Query: 781  KVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLTVGFK 602
            ++FQ FF+ L+E +G+   + S   + ND  +  +  N G+LYLCV LL ACRDL +   
Sbjct: 412  RIFQYFFSCLMESMGLPVVNGSGTCSFNDDCMISKRPNHGSLYLCVELLGACRDLVISSG 471

Query: 601  ETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLATFPG 422
            +         + WCCLLQ FS SL+    STL             +  VKGLQ LATFPG
Sbjct: 472  DLASQCVSASETWCCLLQRFSTSLSMIFSSTLATSTDKPAHDADVYLAVKGLQILATFPG 531

Query: 421  SSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTSYKNI 242
              + +SK+ CE +L  FVSIIT               L+QIG FI  S ++EK  SY +I
Sbjct: 532  GYLLVSKSTCESILMTFVSIITVDFNKTLLWKLSVKALVQIGLFIHGSNESEKSMSYMDI 591

Query: 241  IVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASVEGNV 62
            +V +  S++S D+  +P  L+LEA++ IGT+GL YM++++  L+E I AN  +  V+GNV
Sbjct: 592  VVQKIVSMISSDNHDVPFQLQLEAISDIGTSGLKYMLKIVTQLQEVICANLAEVYVQGNV 651

Query: 61   KSVEILIYLLEYYSGQVLPW 2
            KS +++I+LLE YS ++LPW
Sbjct: 652  KSAKVIIHLLECYSNELLPW 671


>ref|XP_011011445.1| PREDICTED: uncharacterized protein LOC105116012 isoform X2 [Populus
            euphratica]
          Length = 1029

 Score =  495 bits (1274), Expect = e-137
 Identities = 270/558 (48%), Positives = 361/558 (64%), Gaps = 3/558 (0%)
 Frame = -1

Query: 1666 VTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAAI 1487
            VT +DA+ + +S+L+NLQVQSL  HDRK+CFEL+ECLLE+Y  AVA LGDDL+YGIC AI
Sbjct: 2    VTSSDAKGVAESFLQNLQVQSLGQHDRKLCFELMECLLEYYPLAVASLGDDLIYGICEAI 61

Query: 1486 DEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPK-NDDIHV 1310
            D EKDPQCL+L FHI+EVLV+VF +P   I SFA DLF ILS YFPI+FTH K  +D+ V
Sbjct: 62   DGEKDPQCLMLAFHIMEVLVQVFPEPCSPIESFASDLFGILSSYFPIHFTHAKAEEDVEV 121

Query: 1309 KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLHYGADRIAK 1130
            KRDDLSRALM AF+S+PLFEP VIP                      YCT  YGA+RIAK
Sbjct: 122  KRDDLSRALMLAFSSSPLFEPSVIPLLLEKLSSSLSSAKVDSLKYLSYCTSKYGAERIAK 181

Query: 1129 HAKAIWSSLKEAICTFSPQDTSFLLAF--ESPKDMRSQENEVAAEALVCLERIMVQLDSL 956
            HA AIWSSLK+AI T      SF+L+F  ES   +  QENE+AAEAL  LE++++Q  +L
Sbjct: 182  HAGAIWSSLKDAIFT---SGQSFVLSFTPESLGGLGCQENEIAAEALALLEKVVIQNSNL 238

Query: 955  SGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSSSSCNKV 776
                F + IV DE+I M+  S+TG     ++  +  QKL+++G IL+VS + S +SC+++
Sbjct: 239  ----FSSMIVGDEEINMVLNSITGYQSCNEIPLQSTQKLYSVGRILYVSVKASVASCSRI 294

Query: 775  FQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLTVGFKET 596
            FQ FF+ L+E +G+   + S   + ND  +  +  N G+LYLCV LL ACRDL +   + 
Sbjct: 295  FQYFFSCLMESMGLPVVNGSGTCSFNDDCMISKRPNHGSLYLCVELLGACRDLVISSGDL 354

Query: 595  KPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLATFPGSS 416
                    + WCCLLQ FS SL+    STL             +  VKGLQ LATFPG  
Sbjct: 355  ASQCVSASETWCCLLQRFSTSLSMIFSSTLATSTDKPAHDADVYLAVKGLQILATFPGGY 414

Query: 415  MPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTSYKNIIV 236
            + +SK+ CE +L  FVSIIT               L+QIG FI  S ++EK  SY +I+V
Sbjct: 415  LLVSKSTCESILMTFVSIITVDFNKTLLWKLSVKALVQIGLFIHGSNESEKSMSYMDIVV 474

Query: 235  GETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASVEGNVKS 56
             +  S++S D+  +P  L+LEA++ IGT+GL YM++++  L+E I AN  +  V+GNVKS
Sbjct: 475  QKIVSMISSDNHDVPFQLQLEAISDIGTSGLKYMLKIVTQLQEVICANLAEVYVQGNVKS 534

Query: 55   VEILIYLLEYYSGQVLPW 2
             +++I+LLE YS ++LPW
Sbjct: 535  AKVIIHLLECYSNELLPW 552


>ref|XP_007024314.1| MMS19 nucleotide excision repair protein, putative isoform 5
            [Theobroma cacao] gi|508779680|gb|EOY26936.1| MMS19
            nucleotide excision repair protein, putative isoform 5
            [Theobroma cacao]
          Length = 1157

 Score =  491 bits (1263), Expect = e-136
 Identities = 263/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+
Sbjct: 113  LRRKSSGGIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDN 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC A+D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTH
Sbjct: 173  LIYGICEAVDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            PK +D+++KRDDL+RALM AF+STPLFEPF IP                       CT+ 
Sbjct: 233  PKGEDVNIKRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+AKH +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++
Sbjct: 293  YGVDRMAKHGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLI 350

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ  +     F++ IV DEDI MIF  ++    Y  + A+ KQ+LHA+G IL  S + S+
Sbjct: 351  VQNTNF----FLDLIVVDEDINMIFNMISSYKSYHGIPAQSKQRLHAVGCILSASVKAST 406

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            +SCN+VF+ FF+RL++ILG+  R+ S + + +DS + P+  N GALYL + LL ACRD+ 
Sbjct: 407  ASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVI 466

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LL++FS SL     S  I C S D+     + GVKGL  LA
Sbjct: 467  ASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASI-CTSEDSHDADVYFGVKGLLILA 525

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFP   + ISK + EK+L  FVSI+T               L+QIG+FIE  +++EK  S
Sbjct: 526  TFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPS 585

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y  ++V +  S  SL D  +P PL+LEAL+ IGT+G  YM+++++GLEEAI AN  +  V
Sbjct: 586  YLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYV 645

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+  LL+ YS +V+PW
Sbjct: 646  HGSSNSAEIVTQLLKCYSDKVIPW 669


>ref|XP_007024313.1| MMS19 nucleotide excision repair protein, putative isoform 4
            [Theobroma cacao] gi|508779679|gb|EOY26935.1| MMS19
            nucleotide excision repair protein, putative isoform 4
            [Theobroma cacao]
          Length = 1136

 Score =  491 bits (1263), Expect = e-136
 Identities = 263/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+
Sbjct: 113  LRRKSSGGIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDN 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC A+D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTH
Sbjct: 173  LIYGICEAVDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            PK +D+++KRDDL+RALM AF+STPLFEPF IP                       CT+ 
Sbjct: 233  PKGEDVNIKRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+AKH +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++
Sbjct: 293  YGVDRMAKHGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLI 350

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ  +     F++ IV DEDI MIF  ++    Y  + A+ KQ+LHA+G IL  S + S+
Sbjct: 351  VQNTNF----FLDLIVVDEDINMIFNMISSYKSYHGIPAQSKQRLHAVGCILSASVKAST 406

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            +SCN+VF+ FF+RL++ILG+  R+ S + + +DS + P+  N GALYL + LL ACRD+ 
Sbjct: 407  ASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVI 466

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LL++FS SL     S  I C S D+     + GVKGL  LA
Sbjct: 467  ASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASI-CTSEDSHDADVYFGVKGLLILA 525

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFP   + ISK + EK+L  FVSI+T               L+QIG+FIE  +++EK  S
Sbjct: 526  TFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPS 585

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y  ++V +  S  SL D  +P PL+LEAL+ IGT+G  YM+++++GLEEAI AN  +  V
Sbjct: 586  YLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYV 645

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+  LL+ YS +V+PW
Sbjct: 646  HGSSNSAEIVTQLLKCYSDKVIPW 669


>ref|XP_007024312.1| MMS19 nucleotide excision repair protein, putative isoform 3
            [Theobroma cacao] gi|508779678|gb|EOY26934.1| MMS19
            nucleotide excision repair protein, putative isoform 3
            [Theobroma cacao]
          Length = 1062

 Score =  491 bits (1263), Expect = e-136
 Identities = 263/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+
Sbjct: 113  LRRKSSGGIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDN 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC A+D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTH
Sbjct: 173  LIYGICEAVDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            PK +D+++KRDDL+RALM AF+STPLFEPF IP                       CT+ 
Sbjct: 233  PKGEDVNIKRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+AKH +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++
Sbjct: 293  YGVDRMAKHGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLI 350

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ  +     F++ IV DEDI MIF  ++    Y  + A+ KQ+LHA+G IL  S + S+
Sbjct: 351  VQNTNF----FLDLIVVDEDINMIFNMISSYKSYHGIPAQSKQRLHAVGCILSASVKAST 406

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            +SCN+VF+ FF+RL++ILG+  R+ S + + +DS + P+  N GALYL + LL ACRD+ 
Sbjct: 407  ASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVI 466

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LL++FS SL     S  I C S D+     + GVKGL  LA
Sbjct: 467  ASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASI-CTSEDSHDADVYFGVKGLLILA 525

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFP   + ISK + EK+L  FVSI+T               L+QIG+FIE  +++EK  S
Sbjct: 526  TFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPS 585

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y  ++V +  S  SL D  +P PL+LEAL+ IGT+G  YM+++++GLEEAI AN  +  V
Sbjct: 586  YLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYV 645

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+  LL+ YS +V+PW
Sbjct: 646  HGSSNSAEIVTQLLKCYSDKVIPW 669


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao]
          Length = 1149

 Score =  491 bits (1263), Expect = e-136
 Identities = 263/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+
Sbjct: 113  LRRKSSGGIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDN 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC A+D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTH
Sbjct: 173  LIYGICEAVDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
            PK +D+++KRDDL+RALM AF+STPLFEPF IP                       CT+ 
Sbjct: 233  PKGEDVNIKRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YG DR+AKH +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++
Sbjct: 293  YGVDRMAKHGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLI 350

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ  +     F++ IV DEDI MIF  ++    Y  + A+ KQ+LHA+G IL  S + S+
Sbjct: 351  VQNTNF----FLDLIVVDEDINMIFNMISSYKSYHGIPAQSKQRLHAVGCILSASVKAST 406

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            +SCN+VF+ FF+RL++ILG+  R+ S + + +DS + P+  N GALYL + LL ACRD+ 
Sbjct: 407  ASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVI 466

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LL++FS SL     S  I C S D+     + GVKGL  LA
Sbjct: 467  ASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASI-CTSEDSHDADVYFGVKGLLILA 525

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFP   + ISK + EK+L  FVSI+T               L+QIG+FIE  +++EK  S
Sbjct: 526  TFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPS 585

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y  ++V +  S  SL D  +P PL+LEAL+ IGT+G  YM+++++GLEEAI AN  +  V
Sbjct: 586  YLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYV 645

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+  LL+ YS +V+PW
Sbjct: 646  HGSSNSAEIVTQLLKCYSDKVIPW 669


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
            gi|557528866|gb|ESR40116.1| hypothetical protein
            CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  488 bits (1256), Expect = e-135
 Identities = 261/563 (46%), Positives = 358/563 (63%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+D
Sbjct: 113  LRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGED 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+Y IC A+D EKDP CL+LTFHIVEV   +F D L  +++FAGDLF+IL  YFPI+FTH
Sbjct: 173  LLYAICEAVDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFAGDLFEILGCYFPIHFTH 230

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K +D  VKRDDLSRALM AF+ST LFEPF IP                      +CT+ 
Sbjct: 231  SKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVK 290

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADRI KHAKA+WSS+K+AI  +S  + +   A ES   +  ++N +  E+L  L+ + 
Sbjct: 291  YGADRIEKHAKAMWSSIKDAI--YSSHEPTLSFASESLDGVGFRDNVILTESLNLLDTVF 348

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
             Q   L    F+++I+ DEDI +IF+S++    YK+++ + KQKLHA+G+IL VSA+ S 
Sbjct: 349  KQNSGL----FLSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASP 404

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            ++CN V + FF  L+  LG+S  + + D   ND  V    LN GALYLC+ L+ ACR+L 
Sbjct: 405  AACNSVMESFFPCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELM 464

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +E K       + W CLLQ++S SLA  L STL    + D+ +   + GVKGL  L 
Sbjct: 465  ASSEEFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILG 524

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TF G S+ IS +I E +L  F SII                L+ IG+FI+   ++EK  S
Sbjct: 525  TFSGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALS 584

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y ++++ +  SL S  D  MP PLKLEA++ IG TG +Y+++++QGLEEA+ AN  +  V
Sbjct: 585  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 644

Query: 73   EGNVKSVEILIYLLEYYSGQVLP 5
             GN KS E+++ LLE YS +VLP
Sbjct: 645  HGNPKSAEVVVQLLECYSNKVLP 667


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score =  487 bits (1254), Expect = e-134
 Identities = 261/563 (46%), Positives = 357/563 (63%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+D
Sbjct: 113  LRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGED 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+Y IC AID EKDP CL+LTFHIVEV   +F D L  +++FA DLF+IL  YFPI+FTH
Sbjct: 173  LLYAICEAIDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFASDLFEILGCYFPIHFTH 230

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K +D  VKRDDLSRALM AF+ST LFEPF IP                      +CT+ 
Sbjct: 231  SKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVK 290

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADRI KHAKA+WSS+K+A+  +S  + +   A ES   +  +EN +  E+L  L+ + 
Sbjct: 291  YGADRIEKHAKAMWSSIKDAV--YSSHEPTLSFASESLDGVGFRENVILTESLNLLDTVF 348

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
             Q   L    F+++I+ DEDI +IF+S++    YK+++ + KQKLHA+G+IL VSA+ S 
Sbjct: 349  KQNSGL----FLSWIIGDEDINLIFKSISSYKTYKEISLQSKQKLHAVGSILSVSAKASP 404

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            ++CN V + FF  L+  LG+S  + + D   ND  V    LN GALYLC+ L+ ACR+L 
Sbjct: 405  AACNSVMESFFPCLMHALGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELM 464

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +E K       + W CLLQ++S SLA  L STL    + D+ +   + GVKGL  L 
Sbjct: 465  ASSEEFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILG 524

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TF G S+ IS +I E +L  F SII                L+ IG+FI+   ++EK  S
Sbjct: 525  TFRGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALS 584

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y ++++ +  SL S  D  MP PLKLEA++ IG TG +Y+++++QGLEEA+ AN  +  V
Sbjct: 585  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 644

Query: 73   EGNVKSVEILIYLLEYYSGQVLP 5
             GN KS E+++ LLE YS +VLP
Sbjct: 645  HGNPKSAEVVVQLLECYSNKVLP 667


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Citrus sinensis]
          Length = 1155

 Score =  487 bits (1254), Expect = e-134
 Identities = 261/563 (46%), Positives = 357/563 (63%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+D
Sbjct: 113  LRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGED 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+Y IC AID EKDP CL+LTFHIVEV   +F D L  +++FA DLF+IL  YFPI+FTH
Sbjct: 173  LLYAICEAIDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFASDLFEILGCYFPIHFTH 230

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K +D  VKRDDLSRALM AF+ST LFEPF IP                      +CT+ 
Sbjct: 231  SKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVK 290

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADRI KHAKA+WSS+K+A+  +S  + +   A ES   +  +EN +  E+L  L+ + 
Sbjct: 291  YGADRIEKHAKAMWSSIKDAV--YSSHEPTLSFASESLDGVGFRENVILTESLNLLDTVF 348

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
             Q   L    F+++I+ DEDI +IF+S++    YK+++ + KQKLHA+G+IL VSA+ S 
Sbjct: 349  KQNSGL----FLSWIIGDEDINLIFKSISSYKTYKEISLQSKQKLHAVGSILSVSAKASP 404

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            ++CN V + FF  L+  LG+S  + + D   ND  V    LN GALYLC+ L+ ACR+L 
Sbjct: 405  AACNSVMESFFPCLMHALGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELM 464

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +E K       + W CLLQ++S SLA  L STL    + D+ +   + GVKGL  L 
Sbjct: 465  ASSEEFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILG 524

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TF G S+ IS +I E +L  F SII                L+ IG+FI+   ++EK  S
Sbjct: 525  TFRGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALS 584

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y ++++ +  SL S  D  MP PLKLEA++ IG TG +Y+++++QGLEEA+ AN  +  V
Sbjct: 585  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 644

Query: 73   EGNVKSVEILIYLLEYYSGQVLP 5
             GN KS E+++ LLE YS +VLP
Sbjct: 645  HGNPKSAEVVVQLLECYSNKVLP 667


>gb|KDO51790.1| hypothetical protein CISIN_1g001284mg [Citrus sinensis]
          Length = 1107

 Score =  486 bits (1251), Expect = e-134
 Identities = 261/563 (46%), Positives = 357/563 (63%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+D
Sbjct: 65   LRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGED 124

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+Y IC AID EKDP CL+LTFHIVEV   +F D L  +++FA DLF+IL  YFPI+FTH
Sbjct: 125  LLYAICEAIDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFASDLFEILGCYFPIHFTH 182

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K +D  VKRDDLSRALM AF+ST LFEPF IP                      +CT+ 
Sbjct: 183  SKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVK 242

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADRI KHAKA+WSS+K+AI  +S  + +   A ES   +  ++N +  E+L  L+ + 
Sbjct: 243  YGADRIEKHAKAMWSSIKDAI--YSSHEPTLSFASESLDGVGFRDNVILTESLNLLDTVF 300

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
             Q   L    F+++I+ DEDI +IF+S++    YK+++ + KQKLHA+G+IL VSA+ S 
Sbjct: 301  KQNSGL----FLSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASP 356

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            ++CN V + FF  L+  LG+S  + + D   ND  V    LN GALYLC+ L+ ACR+L 
Sbjct: 357  AACNSVMESFFPCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELM 416

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +E K       + W CLLQ++S SLA  L STL    + D+ +   + GVKGL  L 
Sbjct: 417  ASSEEFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILG 476

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TF G S+ IS +I E +L  F SII                L+ IG+FI+   ++EK  S
Sbjct: 477  TFSGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALS 536

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y ++++ +  SL S  D  MP PLKLEA++ IG TG +Y+++++QGLEEA+ AN  +  V
Sbjct: 537  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 596

Query: 73   EGNVKSVEILIYLLEYYSGQVLP 5
             GN KS E+++ LLE YS +VLP
Sbjct: 597  HGNPKSAEVVVQLLECYSNKVLP 619


>gb|KDO51789.1| hypothetical protein CISIN_1g001284mg [Citrus sinensis]
          Length = 1103

 Score =  486 bits (1251), Expect = e-134
 Identities = 261/563 (46%), Positives = 357/563 (63%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            LRR ++ G +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+D
Sbjct: 65   LRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGED 124

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+Y IC AID EKDP CL+LTFHIVEV   +F D L  +++FA DLF+IL  YFPI+FTH
Sbjct: 125  LLYAICEAIDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFASDLFEILGCYFPIHFTH 182

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K +D  VKRDDLSRALM AF+ST LFEPF IP                      +CT+ 
Sbjct: 183  SKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVK 242

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADRI KHAKA+WSS+K+AI  +S  + +   A ES   +  ++N +  E+L  L+ + 
Sbjct: 243  YGADRIEKHAKAMWSSIKDAI--YSSHEPTLSFASESLDGVGFRDNVILTESLNLLDTVF 300

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
             Q   L    F+++I+ DEDI +IF+S++    YK+++ + KQKLHA+G+IL VSA+ S 
Sbjct: 301  KQNSGL----FLSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASP 356

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
            ++CN V + FF  L+  LG+S  + + D   ND  V    LN GALYLC+ L+ ACR+L 
Sbjct: 357  AACNSVMESFFPCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELM 416

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +E K       + W CLLQ++S SLA  L STL    + D+ +   + GVKGL  L 
Sbjct: 417  ASSEEFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILG 476

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TF G S+ IS +I E +L  F SII                L+ IG+FI+   ++EK  S
Sbjct: 477  TFSGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALS 536

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y ++++ +  SL S  D  MP PLKLEA++ IG TG +Y+++++QGLEEA+ AN  +  V
Sbjct: 537  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 596

Query: 73   EGNVKSVEILIYLLEYYSGQVLP 5
             GN KS E+++ LLE YS +VLP
Sbjct: 597  HGNPKSAEVVVQLLECYSNKVLP 619


>ref|XP_012451237.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X3 [Gossypium raimondii]
          Length = 1040

 Score =  483 bits (1244), Expect = e-133
 Identities = 262/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            +RR ++ G V+ +DA+ + +SYL+NLQVQSL   +RK+ FEL+ECLLE Y +AVA LGD 
Sbjct: 1    MRRKSSGGMVSGSDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDT 60

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC ++D EKDP CL+LTFHI+EVL R+F DP  +++ FA +LF+IL  YFPI+FTH
Sbjct: 61   LIYGICESVDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTH 120

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K++D+ +KRDDL+RALM AF+STPLFEP+ IP                       CT+ 
Sbjct: 121  QKDEDMTIKRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMK 180

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADR+AKH +AIWSSLKEAI  F   D+  L   ES +     +NE+AAEAL  L++++
Sbjct: 181  YGADRMAKHIEAIWSSLKEAI--FISLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLI 238

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ   L    F++ IV DEDI MIF +++    Y ++  E KQ+L+A+G ILF +A+ S 
Sbjct: 239  VQNTKL----FLDLIVGDEDISMIFNTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQ 294

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
             SCN+VF+ FF+RL++ILG+S+R+ S     ++S +  +  N GALYL + +L ACRD+ 
Sbjct: 295  VSCNRVFECFFSRLMDILGLSARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMI 354

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LLQ+FS +L     S  I C S  T     + GVKGL  LA
Sbjct: 355  ASSETILAATSHTEETWKYLLQSFSPALTMGFCSAFI-CSSEGTHDAATYIGVKGLLILA 413

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFPG    ISK + EK+L MFVSII                L +IG+FIE  +++EK  S
Sbjct: 414  TFPGGYSLISKTVFEKILVMFVSIINEEYSKRLSWKLALKALGEIGSFIERYHESEKEPS 473

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y +I+V +  SL  + D G+P PL+LEAL+ IGT+G  YM++++QGLEEAI AN  +  V
Sbjct: 474  YMDIVVEKILSLAFVGDFGIPFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYV 533

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+ ++L+ YS +V+PW
Sbjct: 534  HGSTSSAEIVTHILKCYSDKVIPW 557


>gb|KJB68183.1| hypothetical protein B456_010G230600 [Gossypium raimondii]
          Length = 1063

 Score =  483 bits (1244), Expect = e-133
 Identities = 262/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            +RR ++ G V+ +DA+ + +SYL+NLQVQSL   +RK+ FEL+ECLLE Y +AVA LGD 
Sbjct: 24   MRRKSSGGMVSGSDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDT 83

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC ++D EKDP CL+LTFHI+EVL R+F DP  +++ FA +LF+IL  YFPI+FTH
Sbjct: 84   LIYGICESVDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTH 143

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K++D+ +KRDDL+RALM AF+STPLFEP+ IP                       CT+ 
Sbjct: 144  QKDEDMTIKRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMK 203

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADR+AKH +AIWSSLKEAI  F   D+  L   ES +     +NE+AAEAL  L++++
Sbjct: 204  YGADRMAKHIEAIWSSLKEAI--FISLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLI 261

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ   L    F++ IV DEDI MIF +++    Y ++  E KQ+L+A+G ILF +A+ S 
Sbjct: 262  VQNTKL----FLDLIVGDEDISMIFNTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQ 317

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
             SCN+VF+ FF+RL++ILG+S+R+ S     ++S +  +  N GALYL + +L ACRD+ 
Sbjct: 318  VSCNRVFECFFSRLMDILGLSARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMI 377

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LLQ+FS +L     S  I C S  T     + GVKGL  LA
Sbjct: 378  ASSETILAATSHTEETWKYLLQSFSPALTMGFCSAFI-CSSEGTHDAATYIGVKGLLILA 436

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFPG    ISK + EK+L MFVSII                L +IG+FIE  +++EK  S
Sbjct: 437  TFPGGYSLISKTVFEKILVMFVSIINEEYSKRLSWKLALKALGEIGSFIERYHESEKEPS 496

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y +I+V +  SL  + D G+P PL+LEAL+ IGT+G  YM++++QGLEEAI AN  +  V
Sbjct: 497  YMDIVVEKILSLAFVGDFGIPFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYV 556

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+ ++L+ YS +V+PW
Sbjct: 557  HGSTSSAEIVTHILKCYSDKVIPW 580


>ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Gossypium raimondii] gi|763801227|gb|KJB68182.1|
            hypothetical protein B456_010G230600 [Gossypium
            raimondii]
          Length = 1152

 Score =  483 bits (1244), Expect = e-133
 Identities = 262/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            +RR ++ G V+ +DA+ + +SYL+NLQVQSL   +RK+ FEL+ECLLE Y +AVA LGD 
Sbjct: 113  MRRKSSGGMVSGSDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDT 172

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC ++D EKDP CL+LTFHI+EVL R+F DP  +++ FA +LF+IL  YFPI+FTH
Sbjct: 173  LIYGICESVDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTH 232

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K++D+ +KRDDL+RALM AF+STPLFEP+ IP                       CT+ 
Sbjct: 233  QKDEDMTIKRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMK 292

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADR+AKH +AIWSSLKEAI  F   D+  L   ES +     +NE+AAEAL  L++++
Sbjct: 293  YGADRMAKHIEAIWSSLKEAI--FISLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLI 350

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ   L    F++ IV DEDI MIF +++    Y ++  E KQ+L+A+G ILF +A+ S 
Sbjct: 351  VQNTKL----FLDLIVGDEDISMIFNTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQ 406

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
             SCN+VF+ FF+RL++ILG+S+R+ S     ++S +  +  N GALYL + +L ACRD+ 
Sbjct: 407  VSCNRVFECFFSRLMDILGLSARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMI 466

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LLQ+FS +L     S  I C S  T     + GVKGL  LA
Sbjct: 467  ASSETILAATSHTEETWKYLLQSFSPALTMGFCSAFI-CSSEGTHDAATYIGVKGLLILA 525

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFPG    ISK + EK+L MFVSII                L +IG+FIE  +++EK  S
Sbjct: 526  TFPGGYSLISKTVFEKILVMFVSIINEEYSKRLSWKLALKALGEIGSFIERYHESEKEPS 585

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y +I+V +  SL  + D G+P PL+LEAL+ IGT+G  YM++++QGLEEAI AN  +  V
Sbjct: 586  YMDIVVEKILSLAFVGDFGIPFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYV 645

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+ ++L+ YS +V+PW
Sbjct: 646  HGSTSSAEIVTHILKCYSDKVIPW 669


>ref|XP_012451236.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Gossypium raimondii] gi|763801226|gb|KJB68181.1|
            hypothetical protein B456_010G230600 [Gossypium
            raimondii]
          Length = 1104

 Score =  483 bits (1244), Expect = e-133
 Identities = 262/564 (46%), Positives = 364/564 (64%)
 Frame = -1

Query: 1693 LRRSTNVGTVTVTDARILMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDD 1514
            +RR ++ G V+ +DA+ + +SYL+NLQVQSL   +RK+ FEL+ECLLE Y +AVA LGD 
Sbjct: 65   MRRKSSGGMVSGSDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDT 124

Query: 1513 LVYGICAAIDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTH 1334
            L+YGIC ++D EKDP CL+LTFHI+EVL R+F DP  +++ FA +LF+IL  YFPI+FTH
Sbjct: 125  LIYGICESVDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTH 184

Query: 1333 PKNDDIHVKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXYCTLH 1154
             K++D+ +KRDDL+RALM AF+STPLFEP+ IP                       CT+ 
Sbjct: 185  QKDEDMTIKRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMK 244

Query: 1153 YGADRIAKHAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIM 974
            YGADR+AKH +AIWSSLKEAI  F   D+  L   ES +     +NE+AAEAL  L++++
Sbjct: 245  YGADRMAKHIEAIWSSLKEAI--FISLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLI 302

Query: 973  VQLDSLSGYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGKQKLHALGNILFVSARVSS 794
            VQ   L    F++ IV DEDI MIF +++    Y ++  E KQ+L+A+G ILF +A+ S 
Sbjct: 303  VQNTKL----FLDLIVGDEDISMIFNTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQ 358

Query: 793  SSCNKVFQGFFTRLIEILGISSRSFSVDSNLNDSYVFPEGLNFGALYLCVNLLVACRDLT 614
             SCN+VF+ FF+RL++ILG+S+R+ S     ++S +  +  N GALYL + +L ACRD+ 
Sbjct: 359  VSCNRVFECFFSRLMDILGLSARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMI 418

Query: 613  VGFKETKPYYPQVEDFWCCLLQNFSGSLADFLGSTLIACGSHDTEKDYFFSGVKGLQTLA 434
               +         E+ W  LLQ+FS +L     S  I C S  T     + GVKGL  LA
Sbjct: 419  ASSETILAATSHTEETWKYLLQSFSPALTMGFCSAFI-CSSEGTHDAATYIGVKGLLILA 477

Query: 433  TFPGSSMPISKAICEKVLTMFVSIITGRCXXXXXXXXXXXXLIQIGTFIESSYDTEKRTS 254
            TFPG    ISK + EK+L MFVSII                L +IG+FIE  +++EK  S
Sbjct: 478  TFPGGYSLISKTVFEKILVMFVSIINEEYSKRLSWKLALKALGEIGSFIERYHESEKEPS 537

Query: 253  YKNIIVGETFSLLSLDDSGMPLPLKLEALNGIGTTGLDYMMRLIQGLEEAISANFVKASV 74
            Y +I+V +  SL  + D G+P PL+LEAL+ IGT+G  YM++++QGLEEAI AN  +  V
Sbjct: 538  YMDIVVEKILSLAFVGDFGIPFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYV 597

Query: 73   EGNVKSVEILIYLLEYYSGQVLPW 2
             G+  S EI+ ++L+ YS +V+PW
Sbjct: 598  HGSTSSAEIVTHILKCYSDKVIPW 621