BLASTX nr result

ID: Cinnamomum24_contig00015284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00015284
         (886 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]       175   2e-71
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]       108   2e-35
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]   155   3e-35
gb|ERN11849.1| hypothetical protein AMTR_s00020p00100020 [Ambore...   143   5e-33
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   111   6e-22
emb|CBI40707.3| unnamed protein product [Vitis vinifera]               98   5e-19
gb|ERM93694.1| hypothetical protein AMTR_s00004p00209040 [Ambore...    79   6e-17
gb|KCW59989.1| hypothetical protein EUGRSUZ_H02721 [Eucalyptus g...    90   2e-15
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               80   2e-12
gb|KEH16786.1| ribosomal protein S10 [Medicago truncatula]             78   7e-12
gb|KJB09760.1| hypothetical protein B456_001G162600 [Gossypium r...    73   2e-10
ref|XP_002535058.1| conserved hypothetical protein [Ricinus comm...    73   3e-10
ref|XP_002535059.1| conserved hypothetical protein [Ricinus comm...    60   2e-06

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
          Length = 1152

 Score =  175 bits (443), Expect(3) = 2e-71
 Identities = 98/150 (65%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
 Frame = -2

Query: 861  QKDCRLDAPTPPCLALYL--KKGGYEAWETMQEVYDTTGNLKEWRQNS*LINASELCLDA 688
            QKDCR +APTPPCLALYL  +  GY AWE ++EV DTTGNLKEWRQ+             
Sbjct: 910  QKDCRQNAPTPPCLALYLTLRIRGYAAWERIKEVSDTTGNLKEWRQS------------- 956

Query: 687  S*NRTASTRGADG*VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQ 511
                            FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+Q
Sbjct: 957  ----------------FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQ 1000

Query: 510  GKPNGMETKKREGT--ALGRRRSKKRRLTL 427
            GKPNG   +KREGT   LGRRRSKKRRLTL
Sbjct: 1001 GKPNG--NQKREGTTLTLGRRRSKKRRLTL 1028



 Score =  108 bits (269), Expect(3) = 2e-71
 Identities = 55/60 (91%), Positives = 56/60 (93%)
 Frame = -3

Query: 326  LASKPARPRGINRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 147
            LASKPARPRGI RSLPVLTWISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLPSAK+
Sbjct: 1031 LASKPARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090



 Score = 36.2 bits (82), Expect(3) = 2e-71
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 55   RIFGAQYEILFSCKTRSE 2
            R+FGAQYEILF CKTRS+
Sbjct: 1117 RLFGAQYEILFYCKTRSD 1134


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
          Length = 159

 Score =  108 bits (269), Expect(3) = 2e-35
 Identities = 55/60 (91%), Positives = 56/60 (93%)
 Frame = -3

Query: 326 LASKPARPRGINRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 147
           LASKPARPRGI RSLPVLTWISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLPSAK+
Sbjct: 38  LASKPARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97



 Score = 53.9 bits (128), Expect(3) = 2e-35
 Identities = 29/37 (78%), Positives = 31/37 (83%), Gaps = 2/37 (5%)
 Frame = -2

Query: 531 MGSTCEQGKPNGMETKKREGT--ALGRRRSKKRRLTL 427
           MGSTC+QGKPNG   +KREGT   LGRRRSKKRRLTL
Sbjct: 1   MGSTCKQGKPNG--NQKREGTTLTLGRRRSKKRRLTL 35



 Score = 36.2 bits (82), Expect(3) = 2e-35
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 55  RIFGAQYEILFSCKTRSE 2
           R+FGAQYEILF CKTRS+
Sbjct: 124 RLFGAQYEILFYCKTRSD 141


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score =  155 bits (393), Expect = 3e-35
 Identities = 100/156 (64%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
 Frame = +1

Query: 205 RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYARPAAYPIG 384
           RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYAR AAYPIG
Sbjct: 38  RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYARAAAYPIG 97

Query: 385 LEASYLSPIS-PGTLKGEPSLFGSSSAQCGTLPFFGFHPIGFTLFTG*PHGSKKRRSCAI 561
           LEASYLSPIS P     +P      +A+ G L  +        LF   P  ++K  SC  
Sbjct: 98  LEASYLSPISRPFNFLVDP-----MAARKGDLVLY-----SGDLF---PTEARKLPSC-- 142

Query: 562 LR*SLAYRGTQTPIVSQITFRESKGEAYSSISSSRR 669
                          +QITFRESKGEAYSSISSSRR
Sbjct: 143 ---------------TQITFRESKGEAYSSISSSRR 163



 Score =  106 bits (264), Expect = 2e-20
 Identities = 55/76 (72%), Positives = 59/76 (77%)
 Frame = +2

Query: 521 VDPMAARKGDLVLYSGDLLPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAVRFYEASKH 700
           VDPMAARKGDLVLYSGDL PTEARKLPSC +      KG+     +    +VRFYEASKH
Sbjct: 114 VDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGEAYSSISSSRRSVRFYEASKH 173

Query: 701 SSLALINQEFCRHSLR 748
           SSLALINQEFCRHSLR
Sbjct: 174 SSLALINQEFCRHSLR 189


>gb|ERN11849.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  143 bits (361), Expect(2) = 5e-33
 Identities = 70/76 (92%), Positives = 71/76 (93%)
 Frame = +2

Query: 497 PLGLPCSQVDPMAARKGDLVLYSGDLLPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAV 676
           PLGLPCSQVDP A RKGDLVLYS DLLPTEA KLPSCP+SHSVNRKGKPTHPSAPLVDAV
Sbjct: 10  PLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTHPSAPLVDAV 69

Query: 677 RFYEASKHSSLALINQ 724
            FYEASKHSSLALINQ
Sbjct: 70  WFYEASKHSSLALINQ 85



 Score = 26.2 bits (56), Expect(2) = 5e-33
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 465 MRYPPVFWFP 494
           MR PPVFWFP
Sbjct: 1   MRCPPVFWFP 10


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score =  111 bits (278), Expect = 6e-22
 Identities = 58/61 (95%), Positives = 58/61 (95%)
 Frame = +1

Query: 148 SFALGKRFAVAKLTASLSARAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEAS 327
           SFALGKRFAVAKLTASLS RAKLRPRLLV SGRL PSPEIQVSTGKDLLIPRGRAGLEAS
Sbjct: 19  SFALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEAS 78

Query: 328 Y 330
           Y
Sbjct: 79  Y 79



 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 40/48 (83%), Positives = 41/48 (85%)
 Frame = +2

Query: 539 RKGDLVLYSGDLLPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAVRF 682
           +KGDLVLYSG   PTEARK PSCPRSHSVNRKGKPTHPSAPLVD   F
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGF 136


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 98.2 bits (243), Expect(2) = 5e-19
 Identities = 46/50 (92%), Positives = 46/50 (92%)
 Frame = -2

Query: 645 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNG 496
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNG
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNG 564



 Score = 24.3 bits (51), Expect(2) = 5e-19
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 496 DGNQKTGGYRI 464
           +GNQKTGGY I
Sbjct: 563 NGNQKTGGYHI 573


>gb|ERM93694.1| hypothetical protein AMTR_s00004p00209040 [Amborella trichopoda]
          Length = 172

 Score = 79.0 bits (193), Expect(2) = 6e-17
 Identities = 49/71 (69%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
 Frame = -2

Query: 495 METKKREGTALGRRRSKKRRLT-LQSSG*DRRQVACFQADRIGGGPGVEASRQKL--SVA 325
           M TKK EGTALGRRRSKKRRLT L   G   R+   FQADR+G  PG+E SRQKL   VA
Sbjct: 1   MGTKKWEGTALGRRRSKKRRLTHLGEIG--NREPYFFQADRLG--PGIEVSRQKLLPQVA 56

Query: 324 CFQAGPAARNQ 292
           CFQAGPAARN+
Sbjct: 57  CFQAGPAARNE 67



 Score = 36.6 bits (83), Expect(2) = 6e-17
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -3

Query: 284 LPVLTWISGDGIRRPEA 234
           +PVLTWISGDGIRRP A
Sbjct: 70  VPVLTWISGDGIRRPSA 86


>gb|KCW59989.1| hypothetical protein EUGRSUZ_H02721 [Eucalyptus grandis]
          Length = 76

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = -2

Query: 621 ECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGMETKKREGTALGRRRSKK 442
           ECDLGHDGSL ASVGKRSPEYSTR PFLAAMGSTCEQGKPNG   +K  G  +G++   K
Sbjct: 2   ECDLGHDGSLHASVGKRSPEYSTRLPFLAAMGSTCEQGKPNG--NQKMGGYCIGQKTIHK 59

Query: 441 RR 436
            +
Sbjct: 60  AK 61


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 49/113 (43%), Positives = 57/113 (50%)
 Frame = -2

Query: 774  QEVYDTTGNLKEWRQNS*LINASELCLDAS*NRTASTRGADG*VGFPFRFTECDLGHDGS 595
            ++VYDTTGNLKEWR                                              
Sbjct: 1761 RQVYDTTGNLKEWR---------------------------------------------- 1774

Query: 594  LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGMETKKREGTALGRRRSKKRR 436
            LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNG   +K  G  +G++  +K +
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNG--NQKMGGYRIGQKTIQKAK 1825


>gb|KEH16786.1| ribosomal protein S10 [Medicago truncatula]
          Length = 81

 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 43/56 (76%), Positives = 47/56 (83%), Gaps = 3/56 (5%)
 Frame = -2

Query: 585 SVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGMETKKREGTA--LGRRRSKKRRLTL 427
           + GKRSPEYSTRSP FLA MGSTC+QGKPNG   +KREGT   LGRRRSKK+RLTL
Sbjct: 15  TTGKRSPEYSTRSPCFLAVMGSTCKQGKPNG--NQKREGTTLILGRRRSKKQRLTL 68


>gb|KJB09760.1| hypothetical protein B456_001G162600 [Gossypium raimondii]
          Length = 118

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 299 GINRSLPVLTWISGDGIRRPEATSSRGRSLALADRLA 189
           GI RSLPVLTWISGDGIRRPEATSSRGRSLALADRLA
Sbjct: 46  GIKRSLPVLTWISGDGIRRPEATSSRGRSLALADRLA 82


>ref|XP_002535058.1| conserved hypothetical protein [Ricinus communis]
           gi|223524110|gb|EEF27319.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 65

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 245 RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT 132
           RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT
Sbjct: 28  RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT 65


>ref|XP_002535059.1| conserved hypothetical protein [Ricinus communis]
           gi|223524111|gb|EEF27320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 75

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   FPNGSCKKIGFHIELQIYAIGMGWLLQAL 87
           +PNGSCKKIGFHIELQIYAIG+GWLL AL
Sbjct: 45  YPNGSCKKIGFHIELQIYAIGIGWLLLAL 73


Top