BLASTX nr result

ID: Cinnamomum24_contig00013729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00013729
         (632 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010261412.1| PREDICTED: golgin candidate 4 [Nelumbo nucif...    77   6e-12
ref|XP_002320829.1| intracellular protein transport protein USO1...    62   3e-07
ref|XP_006375354.1| hypothetical protein POPTR_0014s08700g [Popu...    62   3e-07
ref|XP_011037180.1| PREDICTED: golgin candidate 4 isoform X1 [Po...    60   1e-06

>ref|XP_010261412.1| PREDICTED: golgin candidate 4 [Nelumbo nucifera]
          Length = 802

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -2

Query: 172 MMWNTIATFKENLSQIALDVQDAVEELEVYGPVPKDDASISNHLISHRFAQSKSP 8
           MMW+TIA +KENL+QI LDV+DA +ELE+Y P   +D+S+S+   SHRFAQSKSP
Sbjct: 1   MMWSTIANYKENLNQIVLDVKDAAQELEIYRPSTGEDSSVSDRRTSHRFAQSKSP 55


>ref|XP_002320829.1| intracellular protein transport protein USO1 [Populus trichocarpa]
           gi|222861602|gb|EEE99144.1| intracellular protein
           transport protein USO1 [Populus trichocarpa]
          Length = 729

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 172 MMWNTIATFKENLSQIALDVQDAVEELEVYGPVPKDDASISNHLISHRFAQSKSPSP 2
           MMW++IA  K+NL +IALDV D  E+LE++      D+S+S+   SHRFA SKS SP
Sbjct: 1   MMWSSIANLKQNLEKIALDVHDDDEDLEIHASTNGYDSSVSDRRNSHRFAHSKSVSP 57


>ref|XP_006375354.1| hypothetical protein POPTR_0014s08700g [Populus trichocarpa]
           gi|550323788|gb|ERP53151.1| hypothetical protein
           POPTR_0014s08700g [Populus trichocarpa]
          Length = 774

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 172 MMWNTIATFKENLSQIALDVQDAVEELEVYGPVPKDDASISNHLISHRFAQSKSPSP 2
           MMW++IA  K+NL +IALDV D  E+LE++      D+S+S+   SHRFA SKS SP
Sbjct: 1   MMWSSIANLKQNLEKIALDVHDDDEDLEIHASTNGYDSSVSDRRNSHRFAHSKSVSP 57


>ref|XP_011037180.1| PREDICTED: golgin candidate 4 isoform X1 [Populus euphratica]
          Length = 761

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -2

Query: 172 MMWNTIATFKENLSQIALDVQDAVEELEVYGPVPKDDASISNHLISHRFAQSKSPSP 2
           MMW++I   K+NL +IALDV D  E+LE++      D+S+S+   SHRFA SKS SP
Sbjct: 1   MMWSSIENLKQNLEKIALDVHDDDEDLEIHASTNGYDSSVSDRRNSHRFAHSKSVSP 57


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