BLASTX nr result

ID: Cinnamomum24_contig00013697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00013697
         (1292 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256854.1| PREDICTED: pumilio homolog 2-like [Nelumbo n...    50   4e-08
ref|XP_010262560.1| PREDICTED: pumilio homolog 2-like [Nelumbo n...    47   2e-07
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]    45   2e-06
ref|XP_011032252.1| PREDICTED: pumilio homolog 2-like isoform X1...    41   4e-06
ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Popu...    41   4e-06
emb|CDP09091.1| unnamed protein product [Coffea canephora]             43   8e-06

>ref|XP_010256854.1| PREDICTED: pumilio homolog 2-like [Nelumbo nucifera]
           gi|720003023|ref|XP_010256855.1| PREDICTED: pumilio
           homolog 2-like [Nelumbo nucifera]
           gi|720003026|ref|XP_010256857.1| PREDICTED: pumilio
           homolog 2-like [Nelumbo nucifera]
           gi|720003029|ref|XP_010256858.1| PREDICTED: pumilio
           homolog 2-like [Nelumbo nucifera]
          Length = 1058

 Score = 49.7 bits (117), Expect(2) = 4e-08
 Identities = 27/53 (50%), Positives = 30/53 (56%)
 Frame = -2

Query: 223 MLSNMGVSPMLESNEVSYGXXXXXXXXXXXXXXXXXXESDRERELNIYRSGSA 65
           MLS MG+ PML SNE SYG                   +DRERELN+YRSGSA
Sbjct: 1   MLSEMGMRPMLGSNEGSYGEELGKELGMLLREQRRQEANDRERELNLYRSGSA 53



 Score = 37.0 bits (84), Expect(2) = 4e-08
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -1

Query: 62  PTVEGSLTAVGGLFGHGG 9
           PTVEGSLTA GGLFG+GG
Sbjct: 55  PTVEGSLTAFGGLFGNGG 72


>ref|XP_010262560.1| PREDICTED: pumilio homolog 2-like [Nelumbo nucifera]
          Length = 1050

 Score = 47.4 bits (111), Expect(2) = 2e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = -2

Query: 229 LEMLSNMGVSPMLESNEVSYGXXXXXXXXXXXXXXXXXXESDRERELNIYRSGSA 65
           ++MLS+MG+ P++ SN+ SYG                   +DRERELN+YRSGSA
Sbjct: 1   MKMLSDMGMRPIVGSNDGSYGEDLGKELGMLLLEQRRQDANDRERELNLYRSGSA 55



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -1

Query: 62  PTVEGSLTAVGGLFGHGGH 6
           PTVEGSLTAVGGLFG+G +
Sbjct: 57  PTVEGSLTAVGGLFGNGSN 75


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 24/53 (45%), Positives = 27/53 (50%)
 Frame = -2

Query: 223 MLSNMGVSPMLESNEVSYGXXXXXXXXXXXXXXXXXXESDRERELNIYRSGSA 65
           MLS +G  PML  NE S+G                    DRERELN+YRSGSA
Sbjct: 1   MLSELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQEVDDRERELNLYRSGSA 53



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -1

Query: 62  PTVEGSLTAVGGLFGHGG 9
           PTVEGSL+AVGGLFG GG
Sbjct: 55  PTVEGSLSAVGGLFGGGG 72


>ref|XP_011032252.1| PREDICTED: pumilio homolog 2-like isoform X1 [Populus euphratica]
           gi|743865710|ref|XP_011032253.1| PREDICTED: pumilio
           homolog 2-like isoform X1 [Populus euphratica]
          Length = 1067

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = -2

Query: 223 MLSNMGVSPMLESNEVSYGXXXXXXXXXXXXXXXXXXESDRERELNIYRSGSA 65
           MLS +G  PM+ +N+ S+G                    DRE+ELN+YRSGSA
Sbjct: 1   MLSELGRRPMIGANDGSFGDDLEKELGLLLREQRRQEADDREKELNLYRSGSA 53



 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -1

Query: 62  PTVEGSLTAVGGLFGHGGH 6
           PTVEGSL AVGGLFG GGH
Sbjct: 55  PTVEGSLNAVGGLFGGGGH 73


>ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Populus trichocarpa]
           gi|550330981|gb|EEE88119.2| hypothetical protein
           POPTR_0009s03980g [Populus trichocarpa]
          Length = 1009

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = -2

Query: 223 MLSNMGVSPMLESNEVSYGXXXXXXXXXXXXXXXXXXESDRERELNIYRSGSA 65
           MLS +G  PM+ +N+ S+G                    DRE+ELN+YRSGSA
Sbjct: 1   MLSELGRRPMIGANDGSFGDDLEKELGLLLREQRRQEADDREKELNLYRSGSA 53



 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -1

Query: 62  PTVEGSLTAVGGLFGHGGH 6
           PTVEGSL AVGGLFG GGH
Sbjct: 55  PTVEGSLNAVGGLFGGGGH 73


>emb|CDP09091.1| unnamed protein product [Coffea canephora]
          Length = 1030

 Score = 43.1 bits (100), Expect(2) = 8e-06
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = -2

Query: 223 MLSNMGVSPMLESNEVSYGXXXXXXXXXXXXXXXXXXESDRERELNIYRSGSA 65
           M+S +G  PML SNE S+G                    DRE+ELN+YRSGSA
Sbjct: 1   MISELGRRPMLGSNENSFGDELEKEIGLLLREQRREDADDREKELNLYRSGSA 53



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 62  PTVEGSLTAVGGLFGHG 12
           PTVEGSL+AVGGLF HG
Sbjct: 55  PTVEGSLSAVGGLFNHG 71


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