BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00013544
         (1706 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III s...   449   e-123
ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III s...   449   e-123
ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III s...   434   e-118
ref|XP_010254912.1| PREDICTED: DNA-directed RNA polymerase III s...   434   e-118
ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III s...   434   e-118
ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III s...   434   e-118
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   429   e-117
ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III s...   427   e-116
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   427   e-116
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   424   e-115
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   422   e-115
emb|CDP02819.1| unnamed protein product [Coffea canephora]            409   e-111
ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III s...   379   e-102
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   377   e-101
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   369   5e-99
ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III s...   359   3e-96
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   358   9e-96
ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...   356   4e-95
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   354   1e-94
ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III s...   352   5e-94

>ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Phoenix dactylifera]
          Length = 701

 Score =  449 bits (1155), Expect = e-123
 Identities = 253/535 (47%), Positives = 341/535 (63%), Gaps = 17/535 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVTGYAVGFLAENKLHLNPVHAVMK 1527
            +EVDL ++V   N+D  V  P+  EKQTLSSS+A F T YAVG L  N+LHLNPVHAV++
Sbjct: 173  IEVDLSLDVNSENYDRDVDEPMRIEKQTLSSSKASFATSYAVGILRGNQLHLNPVHAVVQ 232

Query: 1526 LRPSLEYLNV-LQKKNNVAGSEVVACSDTG--------------KLVEATNETVDDAQAW 1392
            LRPS+ +++  LQ + + A     +   T               K+ E +NE ++D + W
Sbjct: 233  LRPSMSHIDAGLQGRKHSAKGVQGSAKSTDEIPEPPKPSVRQGKKVSEDSNENINDYEPW 292

Query: 1391 ISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFF 1212
            ISLEYH  DSPF+ ++ Q + A+E++ IQF +  SDYVN+LCPGT ++    +GP RR  
Sbjct: 293  ISLEYHPIDSPFAERYHQKMAAEENNLIQFTMQPSDYVNTLCPGTSTDKKRTKGPPRRVL 352

Query: 1211 LTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRC 1032
            L++PLEER+KKW +EG  V+RF ALMHLAP ++E +VLKVLQ +A LV+GLWV KSSL  
Sbjct: 353  LSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLHAYLVQGLWVTKSSLLY 412

Query: 1031 ANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPED 852
                ALARD IL LFS +  I    L+ ++  +  L H L+PLAVE S    WKF+E  D
Sbjct: 413  EGFNALARDRILFLFSTNPVIHSDNLKTLR--SAPLKHILSPLAVERSVFSDWKFKEATD 470

Query: 851  NAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSDC 672
             +F+K YP+IVKEQ  AWSSR +  MD +   GK N   + +NS+      +   +    
Sbjct: 471  ISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGK-NIHMMTKNSLSPNIVKNTGALGR-- 527

Query: 671  ADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKST 492
             D  A   ++   S   TTMS+ETR+ LP+AL ++F   +V SL  I  GLRD+A+S S+
Sbjct: 528  VDPDANRSKEGTMSSAGTTMSSETRENLPRALFKIFQEKRVRSLNSIVSGLRDLAISSSS 587

Query: 491  LPKXXXXXXXXXXXALGVASQ--PELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVID 318
             P+           A   A    PELQ++ISQ+A NIHG+YVLK +GN  +DPLR+VVID
Sbjct: 588  RPRDDAKTKALANAAKNGADAPLPELQSVISQVAANIHGLYVLKSMGNPTLDPLRNVVID 647

Query: 317  LFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
            LFRGKE NAKLKK +  +A + +L R  ++SEY QV+NELCVSSK G W+L+S D
Sbjct: 648  LFRGKEPNAKLKKQEISKAAEFRLKRNITDSEYNQVVNELCVSSK-GAWVLRSDD 701


>ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Phoenix dactylifera] gi|672197655|ref|XP_008777119.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Phoenix dactylifera]
          Length = 702

 Score =  449 bits (1155), Expect = e-123
 Identities = 257/536 (47%), Positives = 345/536 (64%), Gaps = 18/536 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVTGYAVGFLAENKLHLNPVHAVMK 1527
            +EVDL ++V   N+D  V  P+  EKQTLSSS+A F T YAVG L  N+LHLNPVHAV++
Sbjct: 173  IEVDLSLDVNSENYDRDVDEPMRIEKQTLSSSKASFATSYAVGILRGNQLHLNPVHAVVQ 232

Query: 1526 LRPSLEYLNV-LQ-KKNNVAGSEVVACS-------------DTGKLV-EATNETVDDAQA 1395
            LRPS+ +++  LQ +K++  G +  A S               GK V E +NE ++D + 
Sbjct: 233  LRPSMSHIDAGLQGRKHSAKGVQGSAKSTDEIPEPPKPSVRQQGKKVSEDSNENINDYEP 292

Query: 1394 WISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRF 1215
            WISLEYH  DSPF+ ++ Q + A+E++ IQF +  SDYVN+LCPGT ++    +GP RR 
Sbjct: 293  WISLEYHPIDSPFAERYHQKMAAEENNLIQFTMQPSDYVNTLCPGTSTDKKRTKGPPRRV 352

Query: 1214 FLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLR 1035
             L++PLEER+KKW +EG  V+RF ALMHLAP ++E +VLKVLQ +A LV+GLWV KSSL 
Sbjct: 353  LLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLHAYLVQGLWVTKSSLL 412

Query: 1034 CANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPE 855
                 ALARD IL LFS +  I    L+ ++  +  L H L+PLAVE S    WKF+E  
Sbjct: 413  YEGFNALARDRILFLFSTNPVIHSDNLKTLR--SAPLKHILSPLAVERSVFSDWKFKEAT 470

Query: 854  DNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSD 675
            D +F+K YP+IVKEQ  AWSSR +  MD +   GK N   + +NS+      +   +   
Sbjct: 471  DISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGK-NIHMMTKNSLSPNIVKNTGALGR- 528

Query: 674  CADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKS 495
              D  A   ++   S   TTMS+ETR+ LP+AL ++F   +V SL  I  GLRD+A+S S
Sbjct: 529  -VDPDANRSKEGTMSSAGTTMSSETRENLPRALFKIFQEKRVRSLNSIVSGLRDLAISSS 587

Query: 494  TLPKXXXXXXXXXXXALGVASQ--PELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVI 321
            + P+           A   A    PELQ++ISQ+A NIHG+YVLK +GN  +DPLR+VVI
Sbjct: 588  SRPRDDAKTKALANAAKNGADAPLPELQSVISQVAANIHGLYVLKSMGNPTLDPLRNVVI 647

Query: 320  DLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
            DLFRGKE NAKLKK +  +A + +L R  ++SEY QV+NELCVSSK G W+L+S D
Sbjct: 648  DLFRGKEPNAKLKKQEISKAAEFRLKRNITDSEYNQVVNELCVSSK-GAWVLRSDD 702


>ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Elaeis guineensis]
          Length = 701

 Score =  434 bits (1116), Expect = e-118
 Identities = 245/535 (45%), Positives = 340/535 (63%), Gaps = 17/535 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVTGYAVGFLAENKLHLNPVHAVMK 1527
            +EVDL ++V   N+D  V  PL  EKQ LSSS+A F T YAVG L  N+LHLNPVHAV++
Sbjct: 174  IEVDLSLDVDSENYDRDVDEPLRIEKQILSSSKASFATSYAVGLLRGNQLHLNPVHAVVQ 233

Query: 1526 LRPSLEYLNV-LQKKNNVAGSEVVACSDTG--------------KLVEATNETVDDAQAW 1392
            LRPS+++++  LQ++ + A     +   T               K+ E +NE +D  + W
Sbjct: 234  LRPSMDHIDAGLQRRKHSAKGVQDSAKSTDEISEPPKPSIRQGKKVSEDSNENIDH-EPW 292

Query: 1391 ISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFF 1212
            ISLEYH  D PF+ ++ Q + A+E + +QF +  SDYVN+LCPGT ++     GP RR  
Sbjct: 293  ISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPGTSADKKRTRGPPRRVL 352

Query: 1211 LTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRC 1032
            L++PLEER+ KW +E   V+ F ALM+LAP ++E +VLK+LQ +A LV+GLWV KSSL  
Sbjct: 353  LSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWVTKSSLLY 412

Query: 1031 ANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPED 852
                ALARD+IL LFS +  I   +L+ ++  +  L H L+ LAVE S    WKF+EP D
Sbjct: 413  EGFNALARDHILFLFSKNPVIHSDKLKTLR--SAPLKHILSTLAVERSVFSDWKFKEPTD 470

Query: 851  NAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSDC 672
             +F+K YP+IVKEQ  AWSSR +  MD +   G RN   + +NS+      +    ++  
Sbjct: 471  ISFLKRYPDIVKEQECAWSSREEQFMDNLRRFG-RNIHMMTKNSLSPNIMKNTG--AAGR 527

Query: 671  ADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKST 492
             D  A   ++   S   TTMS+ETR+ LP+AL+++F   +V S+  I  GLRD+A+S S+
Sbjct: 528  VDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLRDLAISSSS 587

Query: 491  LPKXXXXXXXXXXXALGVASQ--PELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVID 318
             P+           A   A    PELQ++ISQ+A+NIHG+YVLK +GN  +DPLR+VVID
Sbjct: 588  RPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALDPLRNVVID 647

Query: 317  LFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
            LFRGKE NAKLKK +  +A + +L R  ++SEY QV+NELCVSSK G W+L+S D
Sbjct: 648  LFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSK-GAWVLRSDD 701


>ref|XP_010254912.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nelumbo
            nucifera]
          Length = 680

 Score =  434 bits (1116), Expect = e-118
 Identities = 258/531 (48%), Positives = 337/531 (63%), Gaps = 10/531 (1%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL    G    ++  A      KQTLSS  + P  TGYAVG L  NKLHLNPVHAV+
Sbjct: 162  IEVDLRTYDGDNCNNDDAAKNRKMTKQTLSSLWKPPNTTGYAVGVLIGNKLHLNPVHAVV 221

Query: 1529 KLRPSLEYLNVLQ-KKNNVAGSEVV------ACSDTGKLVEATNE-TVDDAQAWISLEYH 1374
            +LRPS+E+L     KK+N+   E+       +    GKL+ + +E   DDA++W+SLEYH
Sbjct: 222  QLRPSMEHLKSSNLKKSNIIPDEINEEKPSGSSKKQGKLLGSLDEQNKDDAESWVSLEYH 281

Query: 1373 GTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFFLTLPLE 1194
              DS  S  ++Q +VA+ESS IQF+++S DY+NSLCPGT S+ N  +GPSRRF L+LPLE
Sbjct: 282  QIDSSISRGYQQKMVARESSPIQFSMNSYDYLNSLCPGTSSDNNRVKGPSRRFLLSLPLE 341

Query: 1193 ERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRCANVQAL 1014
            ER K + S+G  V+RF AL H APD ++ ++L VLQ YA LV+GLWV KS+L C  VQAL
Sbjct: 342  ERFKIFLSKGTQVYRFTALKHFAPDKSDEDLLAVLQGYADLVQGLWVTKSALLCEGVQAL 401

Query: 1013 ARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPEDNAFIKA 834
            ARDY+LL FS    I + +L +  +S +IL   L  LA+E  +   WKF+EP D  F K 
Sbjct: 402  ARDYVLLCFSKGPLISYEKLNETGLSRDILKRVLNSLAIERPSFKDWKFKEPTDMLFTKN 461

Query: 833  YPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSDCADLGAR 654
            +P+IV+EQ+  W  R K I D +H   K    T+ +N        ++ R SS+ AD  A+
Sbjct: 462  FPDIVREQQHRWEIREKKIKDLMHRPVK-GGPTMKQNIT------NRPRTSSN-ADQSAK 513

Query: 653  GGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKSTLPKXXX 474
               +     GT TMS ETR+ALPKAL ELF  HKVCSLQLICQGLRD+AVSK+       
Sbjct: 514  VNVNGTLGCGTVTMSDETREALPKALRELFRIHKVCSLQLICQGLRDLAVSKNNKAHARA 573

Query: 473  XXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPL-GNSNIDPLRSVVIDLFRGKER 297
                    +   A  PELQA+I Q+AIN+HGVYVLK    +  +DPLR+VVI+LF  K  
Sbjct: 574  AVAAAQGVS---APLPELQAVIDQVAINVHGVYVLKSSEEHPELDPLRNVVINLFCAKGP 630

Query: 296  NAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGDGKP 144
            NA LK+ +  EA KI L+R  + +E M+V +ELC+ S+   W LKSGDGKP
Sbjct: 631  NACLKREEIFEAAKIALERTITPNELMKVTSELCI-SRSNAWFLKSGDGKP 680


>ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Elaeis guineensis]
          Length = 695

 Score =  434 bits (1115), Expect = e-118
 Identities = 245/536 (45%), Positives = 340/536 (63%), Gaps = 18/536 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVTGYAVGFLAENKLHLNPVHAVMK 1527
            +EVDL ++V   N+D  V  PL  EKQ LSSS+A F T YAVG L  N+LHLNPVHAV++
Sbjct: 167  IEVDLSLDVDSENYDRDVDEPLRIEKQILSSSKASFATSYAVGLLRGNQLHLNPVHAVVQ 226

Query: 1526 LRPSLEYLNV-LQKKNNVAGSEVVACSDTG---------------KLVEATNETVDDAQA 1395
            LRPS+++++  LQ++ + A     +   T                K+ E +NE +D  + 
Sbjct: 227  LRPSMDHIDAGLQRRKHSAKGVQDSAKSTDEISEPPKPSIRQQGKKVSEDSNENIDH-EP 285

Query: 1394 WISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRF 1215
            WISLEYH  D PF+ ++ Q + A+E + +QF +  SDYVN+LCPGT ++     GP RR 
Sbjct: 286  WISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPGTSADKKRTRGPPRRV 345

Query: 1214 FLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLR 1035
             L++PLEER+ KW +E   V+ F ALM+LAP ++E +VLK+LQ +A LV+GLWV KSSL 
Sbjct: 346  LLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWVTKSSLL 405

Query: 1034 CANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPE 855
                 ALARD+IL LFS +  I   +L+ ++  +  L H L+ LAVE S    WKF+EP 
Sbjct: 406  YEGFNALARDHILFLFSKNPVIHSDKLKTLR--SAPLKHILSTLAVERSVFSDWKFKEPT 463

Query: 854  DNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSD 675
            D +F+K YP+IVKEQ  AWSSR +  MD +   G RN   + +NS+      +    ++ 
Sbjct: 464  DISFLKRYPDIVKEQECAWSSREEQFMDNLRRFG-RNIHMMTKNSLSPNIMKNTG--AAG 520

Query: 674  CADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKS 495
              D  A   ++   S   TTMS+ETR+ LP+AL+++F   +V S+  I  GLRD+A+S S
Sbjct: 521  RVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLRDLAISSS 580

Query: 494  TLPKXXXXXXXXXXXALGVASQ--PELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVI 321
            + P+           A   A    PELQ++ISQ+A+NIHG+YVLK +GN  +DPLR+VVI
Sbjct: 581  SRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALDPLRNVVI 640

Query: 320  DLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
            DLFRGKE NAKLKK +  +A + +L R  ++SEY QV+NELCVSSK G W+L+S D
Sbjct: 641  DLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSK-GAWVLRSDD 695


>ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Elaeis guineensis]
          Length = 702

 Score =  434 bits (1115), Expect = e-118
 Identities = 245/536 (45%), Positives = 340/536 (63%), Gaps = 18/536 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVTGYAVGFLAENKLHLNPVHAVMK 1527
            +EVDL ++V   N+D  V  PL  EKQ LSSS+A F T YAVG L  N+LHLNPVHAV++
Sbjct: 174  IEVDLSLDVDSENYDRDVDEPLRIEKQILSSSKASFATSYAVGLLRGNQLHLNPVHAVVQ 233

Query: 1526 LRPSLEYLNV-LQKKNNVAGSEVVACSDTG---------------KLVEATNETVDDAQA 1395
            LRPS+++++  LQ++ + A     +   T                K+ E +NE +D  + 
Sbjct: 234  LRPSMDHIDAGLQRRKHSAKGVQDSAKSTDEISEPPKPSIRQQGKKVSEDSNENIDH-EP 292

Query: 1394 WISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRF 1215
            WISLEYH  D PF+ ++ Q + A+E + +QF +  SDYVN+LCPGT ++     GP RR 
Sbjct: 293  WISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPGTSADKKRTRGPPRRV 352

Query: 1214 FLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLR 1035
             L++PLEER+ KW +E   V+ F ALM+LAP ++E +VLK+LQ +A LV+GLWV KSSL 
Sbjct: 353  LLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWVTKSSLL 412

Query: 1034 CANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPE 855
                 ALARD+IL LFS +  I   +L+ ++  +  L H L+ LAVE S    WKF+EP 
Sbjct: 413  YEGFNALARDHILFLFSKNPVIHSDKLKTLR--SAPLKHILSTLAVERSVFSDWKFKEPT 470

Query: 854  DNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSD 675
            D +F+K YP+IVKEQ  AWSSR +  MD +   G RN   + +NS+      +    ++ 
Sbjct: 471  DISFLKRYPDIVKEQECAWSSREEQFMDNLRRFG-RNIHMMTKNSLSPNIMKNTG--AAG 527

Query: 674  CADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKS 495
              D  A   ++   S   TTMS+ETR+ LP+AL+++F   +V S+  I  GLRD+A+S S
Sbjct: 528  RVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLRDLAISSS 587

Query: 494  TLPKXXXXXXXXXXXALGVASQ--PELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVI 321
            + P+           A   A    PELQ++ISQ+A+NIHG+YVLK +GN  +DPLR+VVI
Sbjct: 588  SRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALDPLRNVVI 647

Query: 320  DLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
            DLFRGKE NAKLKK +  +A + +L R  ++SEY QV+NELCVSSK G W+L+S D
Sbjct: 648  DLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSK-GAWVLRSDD 702


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
            [Vitis vinifera]
          Length = 672

 Score =  429 bits (1102), Expect = e-117
 Identities = 256/533 (48%), Positives = 332/533 (62%), Gaps = 11/533 (2%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL I+V   N+D         +KQTLS+S + P  TGY VG L  NKLHLNP+HAV+
Sbjct: 153  VEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVV 212

Query: 1529 KLRPSLEYLNV--LQKKNNVAGSEVVACSDTGKLVEATNETVD----DAQAWISLEYHGT 1368
            +LRPS+EYL+    ++KNNV G      +++   +E +NE         Q+W+ L+YH +
Sbjct: 213  QLRPSMEYLSSGGAKRKNNVTGD-----TNSAVKLEVSNEEESVGSLKKQSWVPLKYHSS 267

Query: 1367 DSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCP-GTPSNINGAEGPSRRFFLTLPLEE 1191
            +S FS ++ Q +VA+++S IQF +S  +YVNSLCP G  ++ N ++G SRRF L++PLEE
Sbjct: 268  ESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEE 327

Query: 1190 RIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRCANVQA-- 1017
            R K    EGPPVHRF AL H APD++  +VL VL ++A LV+GLWV KSSL     Q   
Sbjct: 328  RFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVA 387

Query: 1016 -LARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPEDNAFI 840
             LARDYILLLFS    I + Q+      N+ L   L+ LAVE  +   WKF+EP D +F+
Sbjct: 388  PLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFM 447

Query: 839  KAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSDCADLG 660
            K +P+IV+EQR  W S  K I D +HG G+R   T       I ++       SD A   
Sbjct: 448  KLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTG-TSTKSDGATRA 506

Query: 659  ARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKSTLPKX 480
              G       V  T MSAETR+ALPKAL E+F  HKVCS QLICQ LRD+AVSKST PK 
Sbjct: 507  TNG-----TPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKV 561

Query: 479  XXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVIDLFRGKE 300
                          A Q EL AIIS+ A  +HGVYV K   +S  +PLR VV+DLF GKE
Sbjct: 562  DPRTFVAAAYGAD-APQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKE 620

Query: 299  RNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGDGKPR 141
             NAKLK+AD +EA KI L +E +  EY +V++ELC  S+G  W+LKSGDGKP+
Sbjct: 621  PNAKLKRADIMEAAKIALKKEITTHEYNKVVSELC-ESRGSLWVLKSGDGKPK 672


>ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa
            acuminata subsp. malaccensis]
          Length = 672

 Score =  427 bits (1099), Expect = e-116
 Identities = 240/525 (45%), Positives = 336/525 (64%), Gaps = 7/525 (1%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVTGYAVGFLAENKLHLNPVHAVMK 1527
            +EVD  I+    N+D+  A PL  +KQTLSSS AP VT YAVG L  ++LHLNP+HAV++
Sbjct: 160  IEVDFSIDANSENYDQDAAEPLRLQKQTLSSSIAPLVTSYAVGILRGDQLHLNPIHAVVQ 219

Query: 1526 LRPSLEYLN--VLQKKNNVAGSEVVACSDT--GKLVEA-TNETVDDAQAWISLEYHGTDS 1362
            LRPS+ +L+  + +KK+N   +E+   +D   GKL    ++E ++D + WISLEYH  DS
Sbjct: 220  LRPSMAHLDTGLQKKKHNAQSAELSTSNDNSMGKLASVGSDEKIEDDEPWISLEYHAVDS 279

Query: 1361 PFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFFLTLPLEERIK 1182
             F+ ++ + +VA+  + I F +  SDYV+SLCPG  S+    +GPSRR  LTLPLEER+K
Sbjct: 280  HFTERYHRKMVAEAKNQIPFMMKPSDYVSSLCPGASSDNKRTKGPSRRLLLTLPLEERLK 339

Query: 1181 KWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRCANVQALARDY 1002
            KW SEG  ++RF ALMHLAPD ++ +VL  L  YAVLV+GLWV+KS+L      AL RD+
Sbjct: 340  KWLSEGCQINRFDALMHLAPDSSKEDVLNALPLYAVLVQGLWVSKSTLLYEGKVALVRDF 399

Query: 1001 ILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPEDNAFIKAYPEI 822
            IL LFS +  I   +L+ +K     L   ++ LAVE      WKF+E  D +FIK YP+I
Sbjct: 400  ILCLFSRNPIIHLDKLKMIKFDG--LKSLMSSLAVERRAFSDWKFKEATDFSFIKKYPDI 457

Query: 821  VKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSDCADLGARGGQD 642
            VK Q   WS   K +       G   +  ++++S+   +     R++S   D  A   +D
Sbjct: 458  VKNQECVWSDIEKTLP------GFCKSMPMSKSSL---NPSSSKRVTSVKVDADAHVVKD 508

Query: 641  VVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKSTLPKXXXXXXX 462
               S   T+MS+ET++ LPKAL+++F   ++ SL  +  GLR++A+SKS  P+       
Sbjct: 509  RAVSTAVTSMSSETQEHLPKALLKIFQEKRIRSLNSVVHGLRELAISKSFRPRDDSKIKA 568

Query: 461  XXXXALGVASQP--ELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVIDLFRGKERNAK 288
                A   AS P  ELQ+I+SQIA+N+HGVYVLK  GN  +DPLR+VVIDLFRGKE NAK
Sbjct: 569  LISAAKSGASAPASELQSIVSQIAMNVHGVYVLKSTGNPALDPLRNVVIDLFRGKEPNAK 628

Query: 287  LKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
            + K +   A + +L ++ S+SEY QV++ELCVSS+ G W+LKSGD
Sbjct: 629  INKQEIRIAAQTRLKKDISDSEYNQVVHELCVSSR-GSWILKSGD 672


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
            protein product [Vitis vinifera]
          Length = 688

 Score =  427 bits (1098), Expect = e-116
 Identities = 257/544 (47%), Positives = 333/544 (61%), Gaps = 22/544 (4%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL I+V   N+D         +KQTLS+S + P  TGY VG L  NKLHLNP+HAV+
Sbjct: 153  VEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVV 212

Query: 1529 KLRPSLEYLNV--LQKKNNVAGS--------------EVVACSDTGKLVEATNE-TVDDA 1401
            +LRPS+EYL+    ++KNNV G                V +     K++   +E   D A
Sbjct: 213  QLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAA 272

Query: 1400 QAWISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCP-GTPSNINGAEGPS 1224
            ++W+ L+YH ++S FS ++ Q +VA+++S IQF +S  +YVNSLCP G  ++ N ++G S
Sbjct: 273  ESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 332

Query: 1223 RRFFLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKS 1044
            RRF L++PLEER K    EGPPVHRF AL H APD++  +VL VL ++A LV+GLWV KS
Sbjct: 333  RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 392

Query: 1043 SLRCANVQA---LARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHW 873
            SL     Q    LARDYILLLFS    I + Q+      N+ L   L+ LAVE  +   W
Sbjct: 393  SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 452

Query: 872  KFEEPEDNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQ 693
            KF+EP D +F+K +P+IV+EQR  W S  K I D +HG G+R   T       I ++   
Sbjct: 453  KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTG- 511

Query: 692  VRISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRD 513
                SD A     G       V  T MSAETR+ALPKAL E+F  HKVCS QLICQ LRD
Sbjct: 512  TSTKSDGATRATNG-----TPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRD 566

Query: 512  MAVSKSTLPKXXXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPLGNSNIDPLR 333
            +AVSKST PK               A Q EL AIIS+ A  +HGVYV K   +S  +PLR
Sbjct: 567  LAVSKSTSPKVDPRTFVAAAYGAD-APQEELHAIISKYATTVHGVYVWKTSEHSEHNPLR 625

Query: 332  SVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGD 153
             VV+DLF GKE NAKLK+AD +EA KI L +E +  EY +V++ELC  S+G  W+LKSGD
Sbjct: 626  KVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELC-ESRGSLWVLKSGD 684

Query: 152  GKPR 141
            GKP+
Sbjct: 685  GKPK 688


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Vitis vinifera]
          Length = 677

 Score =  424 bits (1089), Expect = e-115
 Identities = 256/538 (47%), Positives = 334/538 (62%), Gaps = 16/538 (2%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL I+V   N+D         +KQTLS+S + P  TGY VG L  NKLHLNP+HAV+
Sbjct: 153  VEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVV 212

Query: 1529 KLRPSLEYLNV--LQKKNNVAGSEVVACSDTGKLVEATNETVD----DAQAWISLEYHGT 1368
            +LRPS+EYL+    ++KNNV G      +++   +E +NE         Q+W+ L+YH +
Sbjct: 213  QLRPSMEYLSSGGAKRKNNVTGD-----TNSAVKLEVSNEEESVGSLKKQSWVPLKYHSS 267

Query: 1367 DSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCP-GTPSNINGAEGPSRRFFLTLPLEE 1191
            +S FS ++ Q +VA+++S IQF +S  +YVNSLCP G  ++ N ++G SRRF L++PLEE
Sbjct: 268  ESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEE 327

Query: 1190 RIK-----KWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRCAN 1026
            R K     K+  +GPPVHRF AL H APD++  +VL VL ++A LV+GLWV KSSL    
Sbjct: 328  RFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPG 387

Query: 1025 VQA---LARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPE 855
             Q    LARDYILLLFS    I + Q+      N+ L   L+ LAVE  +   WKF+EP 
Sbjct: 388  GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPT 447

Query: 854  DNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSD 675
            D +F+K +P+IV+EQR  W S  K I D +HG G+R   T       I ++       SD
Sbjct: 448  DVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTG-TSTKSD 506

Query: 674  CADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKS 495
             A     G       V  T MSAETR+ALPKAL E+F  HKVCS QLICQ LRD+AVSKS
Sbjct: 507  GATRATNG-----TPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKS 561

Query: 494  TLPKXXXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVVIDL 315
            T PK               A Q EL AIIS+ A  +HGVYV K   +S  +PLR VV+DL
Sbjct: 562  TSPKVDPRTFVAAAYGAD-APQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDL 620

Query: 314  FRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGDGKPR 141
            F GKE NAKLK+AD +EA KI L +E +  EY +V++ELC  S+G  W+LKSGDGKP+
Sbjct: 621  FCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELC-ESRGSLWVLKSGDGKPK 677


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Vitis vinifera]
          Length = 693

 Score =  422 bits (1085), Expect = e-115
 Identities = 257/549 (46%), Positives = 335/549 (61%), Gaps = 27/549 (4%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL I+V   N+D         +KQTLS+S + P  TGY VG L  NKLHLNP+HAV+
Sbjct: 153  VEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVV 212

Query: 1529 KLRPSLEYLNV--LQKKNNVAGS--------------EVVACSDTGKLVEATNE-TVDDA 1401
            +LRPS+EYL+    ++KNNV G                V +     K++   +E   D A
Sbjct: 213  QLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAA 272

Query: 1400 QAWISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCP-GTPSNINGAEGPS 1224
            ++W+ L+YH ++S FS ++ Q +VA+++S IQF +S  +YVNSLCP G  ++ N ++G S
Sbjct: 273  ESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 332

Query: 1223 RRFFLTLPLEERIK-----KWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGL 1059
            RRF L++PLEER K     K+  +GPPVHRF AL H APD++  +VL VL ++A LV+GL
Sbjct: 333  RRFLLSMPLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGL 392

Query: 1058 WVAKSSLRCANVQA---LARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEIS 888
            WV KSSL     Q    LARDYILLLFS    I + Q+      N+ L   L+ LAVE  
Sbjct: 393  WVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERP 452

Query: 887  TLGHWKFEEPEDNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIG 708
            +   WKF+EP D +F+K +P+IV+EQR  W S  K I D +HG G+R   T       I 
Sbjct: 453  SFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIA 512

Query: 707  DQDDQVRISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLIC 528
            ++       SD A     G       V  T MSAETR+ALPKAL E+F  HKVCS QLIC
Sbjct: 513  NKTG-TSTKSDGATRATNG-----TPVRRTAMSAETREALPKALEEVFRLHKVCSFQLIC 566

Query: 527  QGLRDMAVSKSTLPKXXXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPLGNSN 348
            Q LRD+AVSKST PK               A Q EL AIIS+ A  +HGVYV K   +S 
Sbjct: 567  QALRDLAVSKSTSPKVDPRTFVAAAYGAD-APQEELHAIISKYATTVHGVYVWKTSEHSE 625

Query: 347  IDPLRSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWM 168
             +PLR VV+DLF GKE NAKLK+AD +EA KI L +E +  EY +V++ELC  S+G  W+
Sbjct: 626  HNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELC-ESRGSLWV 684

Query: 167  LKSGDGKPR 141
            LKSGDGKP+
Sbjct: 685  LKSGDGKPK 693


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score =  409 bits (1052), Expect = e-111
 Identities = 247/545 (45%), Positives = 326/545 (59%), Gaps = 23/545 (4%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPFVT-GYAVGFLAENKLHLNPVHAVM 1530
            +EVDL ++V   N+D      +   KQTL+SS  P VT GYAVG L  NKLHLNP+HAV+
Sbjct: 157  VEVDLAVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVV 216

Query: 1529 KLRPSLEYLNVLQKK----------NNVAGSEVVACS------DTGKLVEATNETVDDAQ 1398
            +LRPS+++      K          +N  G EV   S       +G ++E   +T +D  
Sbjct: 217  QLRPSMQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKSSGPVIEQNKDTRED-- 274

Query: 1397 AWISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRR 1218
             WI L YHG  S  S  + + +V  +SSHIQF+++  DYVN+LCPGT +  NG+ GPSRR
Sbjct: 275  -WIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMNRHDYVNTLCPGTSNENNGSNGPSRR 333

Query: 1217 FFLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSL 1038
              L+LPLEER + W  +GPP+HRF AL HLAPD +  ++L VL Q+A LV+GLW+ KSSL
Sbjct: 334  VLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSL 393

Query: 1037 ---RCANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKF 867
               +   + ALARDY+LLLFS +  I   QL + +  N  +   L  +A E ++L  WKF
Sbjct: 394  LYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLNTVAFERASLNDWKF 453

Query: 866  EEPEDNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVR 687
            +EP D  FIK   +IV+EQ   W    K I +++ G   R      +NS R    ++   
Sbjct: 454  KEPPDMTFIKLNSKIVREQEQTWERLEKLITEKIFGDKNR---PATKNSSRPLTTNNPAT 510

Query: 686  ISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMA 507
              S    L       +   V    MS ETR+ALPKAL +LF +HKVCS Q ICQ LR+MA
Sbjct: 511  SKS----LSKHASNSLNAGVPRRPMSEETREALPKALQKLFQSHKVCSFQQICQRLREMA 566

Query: 506  VSKSTLPKXXXXXXXXXXXALGVASQP-ELQAIISQIAINIHGVYVLK--PLGNSNIDPL 336
            VS+S+ PK             GV + P ELQAIISQ+AINIHGVYVLK  P+ +   D  
Sbjct: 567  VSESSRPKGFAREAIAAAH--GVEAPPEELQAIISQVAINIHGVYVLKSSPV-HPEHDEF 623

Query: 335  RSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSG 156
            R VVIDLF  +  NAKLKKA  IEA K++L R+ ++ EY +V+ ELCV S+G  W+LKSG
Sbjct: 624  RKVVIDLFIAEGPNAKLKKASMIEAAKLQLKRDINSLEYQKVVQELCV-SQGSAWVLKSG 682

Query: 155  DGKPR 141
            DG P+
Sbjct: 683  DGNPK 687


>ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis melo]
          Length = 702

 Score =  379 bits (973), Expect = e-102
 Identities = 234/553 (42%), Positives = 322/553 (58%), Gaps = 31/553 (5%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +E+DL +++   N+D         +KQTL+SS + P  T YAVG L  NKLHLNPVHAV+
Sbjct: 170  VEIDLNVDIESNNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVV 229

Query: 1529 KLRPSLEYLNV--LQKKNNVAGS---------EVVACSDTGKLVEATNETVD----DAQA 1395
            +LRPS E+LN    ++KNN+            +V +   + K  + T  + +    D + 
Sbjct: 230  QLRPSFEHLNSGGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEEC 289

Query: 1394 WISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRF 1215
            WI L+Y+G +S  S +H Q++V++  S +QF++S  DY++SLCPGT ++ N  +GPS+++
Sbjct: 290  WIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKY 349

Query: 1214 FLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKS--- 1044
             L+L LEERIKK  +EGPPV RF AL H APD+   E L+ LQQYA LV+GLWV KS   
Sbjct: 350  LLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFL 409

Query: 1043 -----SLRCANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLG 879
                 S RC      ARD++L LFS +  +   Q+   K   + + H L    VE     
Sbjct: 410  IPQDGSGRC------ARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFK 463

Query: 878  HWKFEEPEDNAFIKAYPEIVKEQRLAWSSRGKGI-MDRVHGCGKRNTSTVARNSVRIGDQ 702
             WKF+E  D++F+  + +IV++Q   W++  K +   R    G   T+T  +  V    +
Sbjct: 464  DWKFKEKTDHSFLSNHVKIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPE 523

Query: 701  D----DQVRISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQL 534
                 D+    S  A L  +G            MS ETR+ALPKAL +LF NHKVCS QL
Sbjct: 524  KQVSCDKTTTKSSNAPLNRKG-----------AMSDETREALPKALQKLFQNHKVCSFQL 572

Query: 533  ICQGLRDMAVSKSTLPKXXXXXXXXXXXALGVASQP-ELQAIISQIAINIHGVYVL-KPL 360
            ICQGLRD+AVS+STLPK           A GV + P EL+ IISQ+A  IHG+YVL    
Sbjct: 573  ICQGLRDLAVSQSTLPK--ADARMAVAAAYGVDAPPEELKKIISQVATEIHGLYVLTSSP 630

Query: 359  GNSNIDPLRSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKG 180
             +   DPLR VVI L RG+   A LKKAD +EA+K +L R  +++EY +V+NE+CV S G
Sbjct: 631  EHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKRELGRAINSNEYSKVMNEICV-SHG 689

Query: 179  GGWMLKSGDGKPR 141
              W LKSGDG  R
Sbjct: 690  SSWTLKSGDGNSR 702


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis sativus] gi|700198105|gb|KGN53263.1|
            hypothetical protein Csa_4G038800 [Cucumis sativus]
          Length = 702

 Score =  377 bits (968), Expect = e-101
 Identities = 233/553 (42%), Positives = 315/553 (56%), Gaps = 31/553 (5%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL +++   N+D    G    +KQTL+SS + P  T YAVG L  NKLHLNPVHAV+
Sbjct: 170  VEVDLNVDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVV 229

Query: 1529 KLRPSLEYLNV--LQKKNNVAGS---------EVVACSDTGKLVEATNETVD----DAQA 1395
            +LRPS E+LN    ++KNNV            +V +   + K  + T  + +    D + 
Sbjct: 230  QLRPSFEHLNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEEC 289

Query: 1394 WISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRF 1215
            WI L+Y+G +S  S +H Q++V++  S +QF++S  DY++SLCPGT ++ N  +GPS+++
Sbjct: 290  WIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKY 349

Query: 1214 FLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKS--- 1044
             L+L LEERIKK  +EGPPV RF AL H APD+   E ++ LQQYA LV+GLWV KS   
Sbjct: 350  LLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFL 409

Query: 1043 -----SLRCANVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLG 879
                 S RC      ARD++L LFS +  +   Q+   K   + + H L    VE     
Sbjct: 410  IPQDGSGRC------ARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFK 463

Query: 878  HWKFEEPEDNAFIKAYPEIVKEQRLAWSSRGKGI-----MDRVHGCGKRNTSTVARNSVR 714
             WKF+E  D  F+  +  I ++Q   W++  KG      +  VH              + 
Sbjct: 464  DWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLE 523

Query: 713  IGDQDDQVRISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQL 534
                 DQ    S  A L  +G            MS ETR+ALPKAL +LF NHKVCS QL
Sbjct: 524  KQVSSDQTTTKSSNAPLNRKG-----------AMSDETREALPKALQKLFQNHKVCSFQL 572

Query: 533  ICQGLRDMAVSKSTLPKXXXXXXXXXXXALGVASQP-ELQAIISQIAINIHGVYVL-KPL 360
            ICQGLRD+AVS+STLPK           A GV + P EL+ IISQ+A  IHG+YVL    
Sbjct: 573  ICQGLRDLAVSQSTLPK--ADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSP 630

Query: 359  GNSNIDPLRSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKG 180
             +   DPLR VVI L RG+   A LKKAD +EA+K +L R  +++EY +V+NE+C+ S G
Sbjct: 631  EHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICI-SHG 689

Query: 179  GGWMLKSGDGKPR 141
              W LKSGDG  R
Sbjct: 690  SSWTLKSGDGNSR 702


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  369 bits (946), Expect = 5e-99
 Identities = 229/544 (42%), Positives = 321/544 (59%), Gaps = 23/544 (4%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +E+DL ++V   N+D   A  L   KQTLSSS   P  TGYAVG L  +KLHLNP+HAV+
Sbjct: 171  VEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVV 230

Query: 1529 KLRPSLEYL--NVLQKKNNVAGSEVV---------------ACSDTGKLVEATNETVDDA 1401
            +LRPS+ +L  +V ++KN  A    V               +     ++  +T +  DD 
Sbjct: 231  QLRPSMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDK 290

Query: 1400 QAWISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSR 1221
            + W+ L+YH + + FS ++ Q ++A+ES  IQF +S  DYV+SLCPG  SN N A+GPSR
Sbjct: 291  ECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSR 349

Query: 1220 RFFLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSS 1041
            R  L++PLEER+KK  SEGPP HRF AL H APD +  ++ +VLQ++A+LV+GLWV KSS
Sbjct: 350  RLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSS 409

Query: 1040 LRCAN--VQALARDYILLLFSASKYIQFGQLRKVKISNEILVHA-LTPLAVEISTLGHWK 870
            L       ++LARDY+LLLFS +  I   Q+  +  S +  V   L  LA+E  +   WK
Sbjct: 410  LLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWK 469

Query: 869  FEEPEDNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQV 690
             +E  D  F K YP+IVK Q   W +    +++ +    K   S     +V   ++    
Sbjct: 470  LKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEK---- 525

Query: 689  RISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDM 510
               +  +D G R     VQ+    TMS ETR+A+PKAL ++F  HKVCSLQLI +GLRD+
Sbjct: 526  ---AMNSDKGVRRVAPAVQA--GRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDL 580

Query: 509  AVSKSTLPKXXXXXXXXXXXALGVASQPELQAIISQIAINIH-GVYVLKPL-GNSNIDPL 336
            A+S+STLPK               A + ELQ ++S++A+ +H G++VL+    +   DPL
Sbjct: 581  ALSQSTLPKADARMVVKAAYGAD-APEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPL 639

Query: 335  RSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSG 156
            R VVI+L R K    KLKKAD   A  + L RE SN+EY +V+++ C   K   W+LKSG
Sbjct: 640  REVVINLLRVK---GKLKKADVSAAALLSLKREISNNEYNKVMSDFC-EYKSSWWVLKSG 695

Query: 155  DGKP 144
            DGKP
Sbjct: 696  DGKP 699


>ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|802640898|ref|XP_012079065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|643721913|gb|KDP31792.1| hypothetical protein
            JCGZ_12253 [Jatropha curcas]
          Length = 720

 Score =  359 bits (922), Expect = 3e-96
 Identities = 231/548 (42%), Positives = 321/548 (58%), Gaps = 27/548 (4%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSSRAPF-VTGYAVGFLAENKLHLNPVHAVM 1530
            ++VDL I+    N+D A A  L  +KQTLSSS  P   TGYAVG L  NKLHLNP+HAV+
Sbjct: 184  VQVDLSIDETT-NWDPAQASKLNLKKQTLSSSFMPSCTTGYAVGVLIGNKLHLNPIHAVV 242

Query: 1529 KLRPSLEYLNVLQ-KKNNVAGSEV-----VACSDTGKLV----------EATNETVDDAQ 1398
            +LRPSLE++N    K+ N+A   +     +  S  GK +          E  N+ + DA+
Sbjct: 243  QLRPSLEHVNSNDLKRRNIASFNIDPTVKIGDSSEGKPIGPSKKQIKRTEVANDQISDAE 302

Query: 1397 -AWISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSR 1221
             +WISL+YHG+ S FS+ + Q ++A+E S ++F +S  DY++SLCP   +N   ++GPSR
Sbjct: 303  KSWISLKYHGSKSDFSSSYLQKMMAEEGSPMEFTMSPYDYMSSLCPVASNNAK-SKGPSR 361

Query: 1220 RFFLTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSS 1041
            RF L+LPLEER+KK   EGPPV RF  L H AP+ T  +VL V+Q++  LV+GLW  +++
Sbjct: 362  RFLLSLPLEERMKKLLIEGPPVQRFSVLKHFAPEDTVEDVLTVVQKHGQLVQGLWAPRTA 421

Query: 1040 LRCANVQAL----ARDYILLLFSASKYIQFGQLRKVKISNEILVHA-LTPLAVEISTLGH 876
            L   + + +    ARDYILLLFS S  I   Q+  +    +  V A L   AVE  +   
Sbjct: 422  LLFPDSKEVYKPPARDYILLLFSKSLVISTSQITSLPARLKEPVRAFLNLFAVERPSFRD 481

Query: 875  WKFEEPEDNAFIKAYPEIVKEQRLAWSSRGK---GIMDRVHGCGKRNTSTVARNSVRIGD 705
            WKF+E  D AF+K +PE+VK+Q + W    K   G +      GK+N       +  +  
Sbjct: 482  WKFKESPDAAFMKLHPEVVKKQVVIWEGVEKKLTGFLSSSSKGGKQNDKRQPTLAHNLTK 541

Query: 704  QDDQVRISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQ 525
            + D  +I+   A         V +    TT+++E+R+AL K L ++   HKVCS +LI Q
Sbjct: 542  ELDPHKIAPKSA--------SVNRVPIRTTITSESREALLKVLPKVLQTHKVCSFELIRQ 593

Query: 524  GLRDMAVSKSTLPKXXXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPL-GNSN 348
            GLRD+AVS+STLPK               A   ELQ IIS++A NIHG YVLK    +  
Sbjct: 594  GLRDLAVSQSTLPKADPRIAKLAADGAD-APLEELQEIISEVATNIHGSYVLKSSPDHPQ 652

Query: 347  IDPLRSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWM 168
             D LR VVIDL   +  NAKLKK++  EA K+ L R+ + +EY +V+ + C  SK   W+
Sbjct: 653  YDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKVMTDFC-ESKASAWV 711

Query: 167  LKSGDGKP 144
            LKSGDGKP
Sbjct: 712  LKSGDGKP 719


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  358 bits (918), Expect = 9e-96
 Identities = 227/512 (44%), Positives = 308/512 (60%), Gaps = 16/512 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +EVDL I+    N+D A A    F+KQTLS+S   P VTGYAVG L  NKLHLNP+HAV+
Sbjct: 167  VEVDLTID-DSSNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVV 225

Query: 1529 KLRPSLEYLNV--LQKKNNVAGSEVVACSDT--GKLVEATNETVDDAQAWISLEYHGTDS 1362
            +LRPSLE++N    ++KN+   +  V   D+  GK + ++ +     Q WISL+YHG+ S
Sbjct: 226  QLRPSLEHVNSNDSKRKNSATLNPEVKLEDSNEGKPIGSSKK-----QCWISLKYHGSKS 280

Query: 1361 PFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFFLTLPLEERIK 1182
             FS+++ + ++A+ESS ++F ++  DY++SLCP   +    ++GP RRF L+LPL ER+K
Sbjct: 281  DFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLK 340

Query: 1181 KWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRC--ANVQALAR 1008
            K   EGPPV RF  L H APD +  +VLKVLQ+Y  LV+GLW  KSSL    AN +   R
Sbjct: 341  KLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIR 400

Query: 1007 DYILLLFSASKYIQFGQLR-KVKISNEILVHALTPLAVEISTLGHWKFEEPEDNAFIKAY 831
            DY+LLLFS +  I   Q+   VKI  EI    L   AVE  +   WKF+E  D  FIK Y
Sbjct: 401  DYVLLLFSKNLVINSSQVNFPVKIKEEI-KSFLNLFAVERPSFKDWKFKEHTDTTFIKLY 459

Query: 830  PEIVKEQRLAWSSRGK---GIMDRVHGCGKRNT---STVARNSVRIGDQDDQV-RISSDC 672
            P+IVK+Q  AW +  K    + DR      +N      +  N+V+  D +  + +I+S  
Sbjct: 460  PDIVKKQEEAWDNTEKRLSKVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASG- 518

Query: 671  ADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKST 492
                       ++ +  TT++ ETR+AL KAL ++F +HKVCS QLICQGLRD+AVS+ST
Sbjct: 519  -----------MRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQST 567

Query: 491  LPKXXXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPL-GNSNIDPLRSVVIDL 315
            LPK               A   ELQ IISQ+A NIHG YVLK    +   D LR V+IDL
Sbjct: 568  LPKADPRIAVAAASGAD-APPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDL 626

Query: 314  FRGKERNAKLKKADFIEATKIKLDREFSNSEY 219
               +  NAKLKKA+  EA ++   R+ +N EY
Sbjct: 627  LLARGPNAKLKKAEVFEAARLAFKRDVTNIEY 658


>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
            indicum]
          Length = 683

 Score =  356 bits (913), Expect = 4e-95
 Identities = 223/536 (41%), Positives = 301/536 (56%), Gaps = 15/536 (2%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            LEVDL ++V   N+D      +  +KQ L+SS + P  +GYAVG L  NKLHLNPVHAV+
Sbjct: 157  LEVDLAVDVDSKNYDSGADPRVQMKKQILTSSWKPPHASGYAVGILTGNKLHLNPVHAVV 216

Query: 1529 KLRPSLEYLNVLQKKNNVAG----------SEVVACSDTGKLVEATNETVDDAQAWISLE 1380
            +LRPS+++L+    K                E      + KL +   +  D  + WI L+
Sbjct: 217  QLRPSMQHLDAKDSKRKTINVEDRVKLEEPQEGKPSGSSKKLSKVPEQNNDSGEGWIPLK 276

Query: 1379 YHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFFLTLP 1200
            YH   S  +  + + ++++  S I F++SS DY+NSLCPGT S+   ++GP RR  LTLP
Sbjct: 277  YHSAKSDVAAGYLRKMMSRGGSQIYFSMSSCDYLNSLCPGTSSDSFSSKGPPRRVLLTLP 336

Query: 1199 LEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSL---RCA 1029
            L+ER + W  EGP VHRF AL +LAPD +  E+L V+Q++A LV+GLWV KSSL      
Sbjct: 337  LKERFRTWLLEGPRVHRFDALKYLAPDESVEEILGVIQEHARLVQGLWVPKSSLVYGTDQ 396

Query: 1028 NVQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEPEDN 849
             V+ LARDY+LLLFS +  I   QL +    ++ +   L  LAVE      WK +E  D 
Sbjct: 397  GVEVLARDYVLLLFSKNIIINNSQLPQRPQLSKAMKEVLNVLAVERPAFSDWKLKELPDI 456

Query: 848  AFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISSDCA 669
            +FIK  P IV++Q   W    K I D +   G RN   V  +S      +     SS+  
Sbjct: 457  SFIKRNPSIVQKQEEEWECLEKKINDLLF--GGRNGPGVKTSSKSNTTNNPAAPKSSNRV 514

Query: 668  DLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSKSTL 489
               A  G     +   T M  E R+A+ KAL +LF + KVCS Q I Q LRDMAVS+S  
Sbjct: 515  ATRAPNG-----APSKTAMPEEVREAVTKALQKLFKSIKVCSFQQISQRLRDMAVSESKR 569

Query: 488  PKXXXXXXXXXXXALGVASQPELQAIISQIAINIHGVYVLKPL-GNSNIDPLRSVVIDLF 312
                         ++  A   ELQAIISQ+A+NIHG+ V K    N   DP R +VIDLF
Sbjct: 570  STGFAREAVAAANSID-AFPDELQAIISQVAVNIHGICVPKSSPDNPQYDPFRKIVIDLF 628

Query: 311  RGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLKSGDGKP 144
              +  NAKLKKA  +EA K++L R+ S  EY +VL ELC+ S+G  W+L+S DG P
Sbjct: 629  LAEGPNAKLKKAPILEAAKMELKRDISPIEYQKVLQELCL-SQGSAWVLRSADGNP 683


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  354 bits (909), Expect = 1e-94
 Identities = 214/534 (40%), Positives = 302/534 (56%), Gaps = 19/534 (3%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +E+DL I+V   N+D   A  L   KQTLS++   P  TGYA+G L  NKLHLNP+HAV+
Sbjct: 163  VEMDLSIDVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVV 222

Query: 1529 KLRPSLEYLNV--LQKKNNVAGSEVVACSDTG------------KLVEATNETVDDAQAW 1392
            +LR S+ +L     ++KNNVA    V   D+             K + +  +  ++ + W
Sbjct: 223  QLRTSMGFLKSGGSKRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECW 282

Query: 1391 ISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRRFF 1212
            + L+YHG+ S FS ++ Q ++ +E+S I F ++  DYV+SLCPG  SN   ++GPSRRF 
Sbjct: 283  VPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFL 342

Query: 1211 LTLPLEERIKKWFSEGPPVHRFYALMHLAPDHTEGEVLKVLQQYAVLVRGLWVAKSSLRC 1032
            L++PLEER KK   EG PV RF  LMH AP+ T  +V+ VL +  +LV+GLW  +S L  
Sbjct: 343  LSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLF 402

Query: 1031 AN--VQALARDYILLLFSASKYIQFGQLRKVKISNEILVHALTPLAVEISTLGHWKFEEP 858
             N  ++ LARDY+LL FS +  ++F  L       + +   L   AVE      WKF + 
Sbjct: 403  NNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQ 462

Query: 857  EDNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSVRIGDQDDQVRISS 678
             D +FIK +P IV +Q   W++  K I D ++  GK  + +  RN     D      ++ 
Sbjct: 463  TDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGK--SGSTLRN-----DAGKSAMVNK 515

Query: 677  DCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQGLRDMAVSK 498
                + +  G     + G   +S E+R+ALPKAL +LF  HKVCSL LI QGLRD+A+S+
Sbjct: 516  HLKAINSSNGPSGALT-GNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQ 574

Query: 497  STLPKXXXXXXXXXXXAL--GVASQPELQAIISQIAINIHGVYVLKPLGNSNIDPLRSVV 324
            STLPK            +        E   +ISQ+A NIHG YV K   +    PLR VV
Sbjct: 575  STLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLRKVV 634

Query: 323  IDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWMLK 162
             DL      +AKLKKAD +EA +  L RE SN+EY +V++++C  SKG  W+LK
Sbjct: 635  TDLLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDIC-ESKGSAWILK 687


>ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Gossypium raimondii] gi|763776418|gb|KJB43541.1|
            hypothetical protein B456_007G205200 [Gossypium
            raimondii] gi|763776419|gb|KJB43542.1| hypothetical
            protein B456_007G205200 [Gossypium raimondii]
          Length = 703

 Score =  352 bits (903), Expect = 5e-94
 Identities = 222/548 (40%), Positives = 320/548 (58%), Gaps = 27/548 (4%)
 Frame = -1

Query: 1706 LEVDLEINVGKGNFDEAVAGPLGFEKQTLSSS-RAPFVTGYAVGFLAENKLHLNPVHAVM 1530
            +E+D+ ++V   N+D   A  L   KQTLSSS   P  +GYAVG L  +KLHLNP+HAV+
Sbjct: 174  VEIDMSVDVDSNNYDSESANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVV 233

Query: 1529 KLRPSLEYLN--VLQKKNNVAGSEVV--------------ACSDTGKLVEATNETVDDAQ 1398
            +LRPSL +L   V ++K+ VA    V              +     K+  +T +  +D +
Sbjct: 234  QLRPSLAHLKSGVSKRKDTVAAEAEVTVKVEPNDGKAAGPSAKQNQKVQSSTEQKAEDKE 293

Query: 1397 AWISLEYHGTDSPFSNKHRQNLVAKESSHIQFALSSSDYVNSLCPGTPSNINGAEGPSRR 1218
             W+ L+YH + S FS ++ Q ++A++SS I+F L+  DYV+SLCP  PSN N A+  SRR
Sbjct: 294  CWVPLKYHSSKSDFSAQYLQKMMAEQSSPIEFTLNPYDYVDSLCP-LPSNNNKAQRLSRR 352

Query: 1217 FFLTLPLEERIKKWFSEGPPVHRFYALM-HLAPDHTEGEVLKVLQQYAVLVRGLWVAKSS 1041
               ++PLE+R+KK  +EG P H F  L  H APD    EV +VLQ++A+LV+GLWV KSS
Sbjct: 353  LLCSIPLEDRLKKLLTEGRPFHHFNTLKRHYAPDDPIEEVFEVLQKHALLVQGLWVPKSS 412

Query: 1040 LRCAN--VQALARDYILLLFSASKYIQFGQLRKVKISNEILVHA-LTPLAVEISTLGHWK 870
            L       ++LARDY+LLLFS + +I + ++  +  S +  V   L  LA+E   L  WK
Sbjct: 413  LLFPGDPSKSLARDYVLLLFSKNPFISYDKVNNLSTSRKEEVKGFLKILAIESPPLKGWK 472

Query: 869  FEEPEDNAFIKAYPEIVKEQRLAWSSRGKGIMDRVHGCGKRNTSTVARNSV----RIGDQ 702
             +E  D  F K YP+IVK+Q   W +    + + +    K   S     +V    + G+ 
Sbjct: 473  LKENTDENFKKEYPDIVKKQEQIWKAGEDNVTNHIWRGAKGGPSRTKPGTVIKSEKAGNS 532

Query: 701  DDQVRISSDCADLGARGGQDVVQSVGTTTMSAETRDALPKALVELFNNHKVCSLQLICQG 522
            D   R  +     GA  G+         TMS ETR+A+PKAL ++F  +KVCSLQLI +G
Sbjct: 533  DKVARKVAP----GAHAGR---------TMSDETREAIPKALKKVFQTYKVCSLQLIRKG 579

Query: 521  LRDMAVSKSTLPKXXXXXXXXXXXALGVASQPELQAIISQIAINIH-GVYVLK-PLGNSN 348
            LRD+A+S+STLPK               A + ELQ ++SQ+A+ +H G++V+K    N  
Sbjct: 580  LRDLALSQSTLPKADARLVVKAAYGAD-APEHELQDVVSQVAVELHGGLFVMKSSQENPE 638

Query: 347  IDPLRSVVIDLFRGKERNAKLKKADFIEATKIKLDREFSNSEYMQVLNELCVSSKGGGWM 168
             DPLR VVI+L R K+   KLKKA+   A ++ L R+ +N+EY +V+++ C   KG  W+
Sbjct: 639  CDPLREVVINLLRVKD---KLKKAEVTAAAQVSLKRDITNNEYNKVMSDFC-EYKGNWWV 694

Query: 167  LKSGDGKP 144
            LKSGDGKP
Sbjct: 695  LKSGDGKP 702