BLASTX nr result
ID: Cinnamomum24_contig00013397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00013397
(399 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ... 50 4e-12
ref|XP_003605618.1| Photosystem II reaction center protein M [Me... 75 2e-11
ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago ... 50 2e-06
ref|YP_001312188.1| hypothetical protein CYtaCp021 [Cycas taitun... 50 2e-06
ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago ... 50 2e-06
ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia olerac... 58 3e-06
gb|AFK48586.1| unknown [Medicago truncatula] 57 6e-06
ref|XP_009402747.1| PREDICTED: uncharacterized protein LOC103986... 57 6e-06
ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arab... 57 6e-06
ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arab... 57 6e-06
>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
gi|355518112|gb|AES99735.1| hypothetical protein
MTR_5g084150 [Medicago truncatula]
Length = 187
Score = 50.4 bits (119), Expect(2) = 4e-12
Identities = 24/35 (68%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1
Query: 273 HL*RTNWLYHPHG-SANCWAELDLNQRRHIANEFT 172
H T W+ HG S N WAELDLNQRRHIANEFT
Sbjct: 4 HFKNTKWVISLHGGSVNFWAELDLNQRRHIANEFT 38
Score = 47.0 bits (110), Expect(2) = 4e-12
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2
Query: 83 TPRGSRIPAASLKERCPEPLDD 18
TPRGSRIP ASLKERCP+PLDD
Sbjct: 41 TPRGSRIPVASLKERCPKPLDD 62
>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
Length = 164
Score = 74.7 bits (182), Expect = 2e-11
Identities = 44/77 (57%), Positives = 46/77 (59%)
Frame = +1
Query: 1 RAGMPLSSSGSGHLSFKEAAGIRLPLGVRRKGVDHGLSISLELILPGSMPERLMGTDCKF 180
RA MP SSSG GHLSFKEA GIRLPLG RLMGTDCKF
Sbjct: 44 RASMPPSSSGLGHLSFKEATGIRLPLG------------------------RLMGTDCKF 79
Query: 181 VGDMSTLVQIQLGPTIR 231
VG+MSTLVQIQL +R
Sbjct: 80 VGNMSTLVQIQLVQLVR 96
>ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago truncatula]
Length = 142
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 83 TPRGSRIPAASLKERCPEPLDDRGIPA 3
TPRGSRIP ASLKERCP+PLDD GI A
Sbjct: 107 TPRGSRIPVASLKERCPKPLDDGGILA 133
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 238 WIGELLGRAGFEPA*TYR 185
WI + LGRAGFEP T R
Sbjct: 92 WISKFLGRAGFEPYPTPR 109
>ref|YP_001312188.1| hypothetical protein CYtaCp021 [Cycas taitungensis]
gi|452848985|ref|YP_007474664.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
gi|149941505|dbj|BAF64929.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|372863140|gb|AEX99213.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 62
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +1
Query: 7 GMPLSSSGSGHLSFKEAAGIRLPLGV 84
G PLSSSG GHLSFKEAAGIRLPLGV
Sbjct: 4 GRPLSSSGPGHLSFKEAAGIRLPLGV 29
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 126 IDSSWVDARAVNGDGL 173
I SWVDAR VN DGL
Sbjct: 47 IHCSWVDARVVNEDGL 62
>ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago truncatula]
Length = 96
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 83 TPRGSRIPAASLKERCPEPLDDRGIPA 3
TPRGSRIP ASLKERCP+PLDD GI A
Sbjct: 61 TPRGSRIPVASLKERCPKPLDDGGILA 87
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 238 WIGELLGRAGFEPA*TYR 185
WI + LGRAGFEP T R
Sbjct: 46 WISKFLGRAGFEPYPTPR 63
>ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia oleracea]
gi|7636100|emb|CAB88720.1| hypothetical protein
(chloroplast) [Spinacia oleracea]
Length = 83
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 145 MPERLMGTDCKFVGDMSTLVQIQLGPTIRRSM 240
MPERLMGTDCKFVG+MSTLVQIQLGP I S+
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPIISSSI 32
>gb|AFK48586.1| unknown [Medicago truncatula]
Length = 29
Score = 56.6 bits (135), Expect = 6e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 145 MPERLMGTDCKFVGDMSTLVQIQLGPTI 228
MPERLMGTDCKFVG+MSTLVQIQLGP I
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPKI 28
>ref|XP_009402747.1| PREDICTED: uncharacterized protein LOC103986449 [Musa acuminata
subsp. malaccensis]
Length = 55
Score = 56.6 bits (135), Expect = 6e-06
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 5 RVCPYRLVVQDISLSRRQRGFDFPWG*DERGLIMDYQ 115
++CPY LVVQDISLSRRQ GFDFPW ER + DYQ
Sbjct: 19 QICPYPLVVQDISLSRRQGGFDFPWEFYERKWLTDYQ 55
>ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp.
lyrata] gi|297334207|gb|EFH64625.1| hypothetical protein
ARALYDRAFT_894017 [Arabidopsis lyrata subsp. lyrata]
Length = 57
Score = 56.6 bits (135), Expect = 6e-06
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 5 RVCPYRLVVQDISLSRRQRGFDFPWG 82
+VCP+RLVVQDISLSRRQRGFDFPWG
Sbjct: 32 QVCPHRLVVQDISLSRRQRGFDFPWG 57
>ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arabidopsis lyrata subsp.
lyrata] gi|297332703|gb|EFH63121.1| hypothetical protein
ARALYDRAFT_893969 [Arabidopsis lyrata subsp. lyrata]
Length = 63
Score = 56.6 bits (135), Expect = 6e-06
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 5 RVCPYRLVVQDISLSRRQRGFDFPWG 82
+VCP+RLVVQDISLSRRQRGFDFPWG
Sbjct: 38 QVCPHRLVVQDISLSRRQRGFDFPWG 63