BLASTX nr result

ID: Cinnamomum24_contig00012314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00012314
         (710 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010909437.1| PREDICTED: zinc finger CCCH domain-containin...    68   6e-09
ref|XP_009408178.1| PREDICTED: zinc finger CCCH domain-containin...    60   9e-07

>ref|XP_010909437.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Elaeis guineensis]
          Length = 706

 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 41/92 (44%), Positives = 54/92 (58%)
 Frame = -3

Query: 552 GPVTTDHNELVHDDPTSAEKADALETDDGLVVDTMGDQELEASVQRDGESDYETVEGGDF 373
           G + T+  EL +D  TSA K +  E  DG+ VD MGDQE+E   QRDG+SDYE VEGG+F
Sbjct: 620 GMIPTEE-ELPNDGQTSA-KGNTHEVQDGITVDAMGDQEMENYGQRDGDSDYEAVEGGEF 677

Query: 372 KPXXXXXXXXXXXXXXXXXXXDFSRRIGAMFS 277
           +P                   DF++++GAMFS
Sbjct: 678 QP---EDDENAYQEDEEDDEDDFAKKVGAMFS 706


>ref|XP_009408178.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like [Musa
           acuminata subsp. malaccensis]
           gi|695041155|ref|XP_009408179.1| PREDICTED: zinc finger
           CCCH domain-containing protein 32-like [Musa acuminata
           subsp. malaccensis] gi|695041157|ref|XP_009408180.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           32-like [Musa acuminata subsp. malaccensis]
          Length = 739

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = -3

Query: 552 GPVTTDHNELVHDDPTSAEKADALETDDGLVVDTMGDQELEASVQRDGESDYETVEGGDF 373
           G +TT+  EL +DD  S+ KADA+ET+DG+ ++ + ++ELE   QRDG  DYE+   GDF
Sbjct: 652 GVITTEDGELTYDDIQSSTKADAVETEDGMGLENVEEEELENYCQRDGGFDYES---GDF 708

Query: 372 K 370
           K
Sbjct: 709 K 709


Top