BLASTX nr result

ID: Cinnamomum24_contig00012078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00012078
         (399 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]    59   2e-06
ref|XP_002266667.2| PREDICTED: ribonuclease II, chloroplastic/mi...    58   2e-06
gb|KDO51155.1| hypothetical protein CISIN_1g0077981mg, partial [...    58   3e-06
ref|XP_006480835.1| PREDICTED: ribonuclease II, chloroplastic/mi...    58   3e-06
ref|XP_006429096.1| hypothetical protein CICLE_v10011102mg [Citr...    58   3e-06

>emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
          Length = 754

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
 Frame = -1

Query: 249 MAVRVVNSCPIFRCACSPPPLSPSRCVSFHFRPFKPHKNPSNLWCH--SLRTRSQFFSF- 79
           MAVR VN+C IFR + S PPL P RC   HF  F+    P NL  H    RT   F S  
Sbjct: 351 MAVRAVNTCSIFR-STSSPPLYPFRCRLHHFGAFQCKSYP-NLGLHFPICRTDRXFLSHG 408

Query: 78  GARSRFFNSLVESVLEELKATSNRRR 1
           G +S    SLVESV+EEL A+  R+R
Sbjct: 409 GVQSCSVYSLVESVMEELHASRKRKR 434


>ref|XP_002266667.2| PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X1
           [Vitis vinifera]
          Length = 794

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
 Frame = -1

Query: 249 MAVRVVNSCPIFRCACSPPPLSPSRCVSFHFRPFKPHKNPSNLWCH--SLRTRSQFFSF- 79
           MAVR VN+C IFR + S PPL P RC   HF  F+    P NL  H    RT   F S  
Sbjct: 3   MAVRAVNTCSIFR-STSSPPLYPFRCRLHHFGAFQCKSYP-NLGLHFPICRTDRVFLSHG 60

Query: 78  GARSRFFNSLVESVLEELKATSNRRR 1
           G +S    SLVESV+EEL A+  R+R
Sbjct: 61  GVQSCSVYSLVESVMEELHASRKRKR 86


>gb|KDO51155.1| hypothetical protein CISIN_1g0077981mg, partial [Citrus sinensis]
           gi|641832115|gb|KDO51156.1| hypothetical protein
           CISIN_1g0077981mg, partial [Citrus sinensis]
          Length = 182

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = -1

Query: 249 MAVRVVNSCPIFRCACSPPPLS-PSRCVSFHFRPFKPHKNPSNLWCH--SLRTRSQFFS- 82
           MAVR VNSC +FR A  PP +S   +C  +HFR  +  +N SNL     + R+  QF + 
Sbjct: 2   MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSERQFLNR 61

Query: 81  FGARSRFFNSLVESVLEELKATSNRRR 1
            G++S   +SLV+SV++EL A   R R
Sbjct: 62  SGSQSCSVHSLVDSVMQELVAIRKRLR 88


>ref|XP_006480835.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial-like
           isoform X2 [Citrus sinensis]
          Length = 719

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = -1

Query: 249 MAVRVVNSCPIFRCACSPPPLS-PSRCVSFHFRPFKPHKNPSNLWCH--SLRTRSQFFS- 82
           MAVR VNSC +FR A  PP +S   +C  +HFR  +  +N SNL     + R+  QF + 
Sbjct: 2   MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSERQFLNR 61

Query: 81  FGARSRFFNSLVESVLEELKATSNRRR 1
            G++S   +SLV+SV++EL A   R R
Sbjct: 62  SGSQSCSVHSLVDSVMQELVAIRKRLR 88


>ref|XP_006429096.1| hypothetical protein CICLE_v10011102mg [Citrus clementina]
           gi|567873015|ref|XP_006429097.1| hypothetical protein
           CICLE_v10011102mg [Citrus clementina]
           gi|568854440|ref|XP_006480834.1| PREDICTED: ribonuclease
           II, chloroplastic/mitochondrial-like isoform X1 [Citrus
           sinensis] gi|557531153|gb|ESR42336.1| hypothetical
           protein CICLE_v10011102mg [Citrus clementina]
           gi|557531154|gb|ESR42337.1| hypothetical protein
           CICLE_v10011102mg [Citrus clementina]
          Length = 794

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = -1

Query: 249 MAVRVVNSCPIFRCACSPPPLS-PSRCVSFHFRPFKPHKNPSNLWCH--SLRTRSQFFS- 82
           MAVR VNSC +FR A  PP +S   +C  +HFR  +  +N SNL     + R+  QF + 
Sbjct: 2   MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSERQFLNR 61

Query: 81  FGARSRFFNSLVESVLEELKATSNRRR 1
            G++S   +SLV+SV++EL A   R R
Sbjct: 62  SGSQSCSVHSLVDSVMQELVAIRKRLR 88


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