BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00011743
         (1327 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010242548.1| PREDICTED: putative E3 ubiquitin-protein lig...   296   2e-77
ref|XP_007035384.1| RING/U-box superfamily protein, putative iso...   283   2e-73
ref|XP_007035383.1| RING/U-box superfamily protein, putative iso...   283   2e-73
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...   271   6e-70
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...   270   2e-69
gb|KDO74932.1| hypothetical protein CISIN_1g002621mg [Citrus sin...   270   2e-69
gb|KDO74931.1| hypothetical protein CISIN_1g002621mg [Citrus sin...   270   2e-69
gb|KDO74929.1| hypothetical protein CISIN_1g002621mg [Citrus sin...   270   2e-69
ref|XP_006489216.1| PREDICTED: putative E3 ubiquitin-protein lig...   270   2e-69
ref|XP_006489214.1| PREDICTED: putative E3 ubiquitin-protein lig...   270   2e-69
ref|XP_006419748.1| hypothetical protein CICLE_v10004269mg [Citr...   269   3e-69
ref|XP_008223058.1| PREDICTED: putative E3 ubiquitin-protein lig...   268   9e-69
ref|XP_008223057.1| PREDICTED: putative E3 ubiquitin-protein lig...   268   9e-69
ref|XP_007225337.1| hypothetical protein PRUPE_ppa001026mg [Prun...   266   3e-68
ref|XP_009352164.1| PREDICTED: putative E3 ubiquitin-protein lig...   266   3e-68
ref|XP_009352162.1| PREDICTED: putative E3 ubiquitin-protein lig...   266   3e-68
ref|XP_012482058.1| PREDICTED: putative E3 ubiquitin-protein lig...   260   2e-66
ref|XP_012482054.1| PREDICTED: putative E3 ubiquitin-protein lig...   260   2e-66
gb|KHG03767.1| E3 ubiquitin-protein ligase protein [Gossypium ar...   259   2e-66
gb|KJB38485.1| hypothetical protein B456_006G256200 [Gossypium r...   259   3e-66

>ref|XP_010242548.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Nelumbo
            nucifera] gi|720082305|ref|XP_010242549.1| PREDICTED:
            putative E3 ubiquitin-protein ligase RF298 [Nelumbo
            nucifera]
          Length = 893

 Score =  296 bits (758), Expect = 2e-77
 Identities = 190/398 (47%), Positives = 234/398 (58%), Gaps = 42/398 (10%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKV--LQQMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    DS  +    Q + P +EF   KS NS + +QQ  C   G N 
Sbjct: 29   QEKGSRNKRKFRADPPLGDSNNLPSSSQTECPTYEFSAEKSQNSLNYEQQGACDLCGLNQ 88

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            + ++    ++   G  G+                       ++E E +E QD DWSD T+
Sbjct: 89   DHIDAPKPDIRVPGIPGSSEE---------------GSTRPKEEVE-EEFQDADWSDLTE 132

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            S LEEL L+NLD IFK+AI+KI + GYSEEVA KA LR G+CYGCKDT+SNIVDNTLAFL
Sbjct: 133  SHLEELVLSNLDTIFKSAIKKIAACGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAFL 192

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            K+ G E  SS + HFFEDLQQLE+Y+LAEMVCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 193  KH-GQEADSSKE-HFFEDLQQLEKYILAEMVCVLREVRPFFSVGDAMWCLLICDMNVSHA 250

Query: 377  CAMDVGPSNSFCGEENTGSS-SVSTASQLKLEGKSSITPSTPELDIPKPSKPNHL----- 216
            CAMD  P + F  +E  G S SV+T  QLK E  SS      EL++P P KPN +     
Sbjct: 251  CAMDGDPLSGFGADEAPGGSPSVTTVPQLKTEVNSS------ELNLPNPIKPNPIFPCSH 304

Query: 215  -------TVQ-------------------RKERSSSSTDAVEEPSTVSGKCVSTISHSSV 114
                   TV                     KE S+S++D  ++PS V G+ +   S    
Sbjct: 305  GPHSDSPTVTGIPNLPNPRNPLVLEGLPPEKENSTSTSDGADKPSGVIGERLQMTS---- 360

Query: 113  FQSSAPEEKSNGSRKGRTN--KREPALRQSPTHMEKMY 6
             QSS PEEKS G RKG +N  KRE  LRQ   H+EK Y
Sbjct: 361  -QSSVPEEKSVGGRKGHSNSAKRESILRQKSLHLEKNY 397


>ref|XP_007035384.1| RING/U-box superfamily protein, putative isoform 2 [Theobroma cacao]
            gi|590660376|ref|XP_007035385.1| RING/U-box superfamily
            protein, putative isoform 2 [Theobroma cacao]
            gi|508714413|gb|EOY06310.1| RING/U-box superfamily
            protein, putative isoform 2 [Theobroma cacao]
            gi|508714414|gb|EOY06311.1| RING/U-box superfamily
            protein, putative isoform 2 [Theobroma cacao]
          Length = 737

 Score =  283 bits (724), Expect = 2e-73
 Identities = 176/384 (45%), Positives = 230/384 (59%), Gaps = 28/384 (7%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEF--GKSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    D  K++   Q ++P++EF   K   +P   Q S C   G N 
Sbjct: 21   QEKGSRNKRKFRADPPLGDPNKIIPSPQNEYPSYEFCAEKFEITPVHGQASACDLCGVNQ 80

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E EADE QD DWSD T+
Sbjct: 81   DHSDGLKLDLGLSSTVGSSE---------------VGPSQPREEIEADEYQDADWSDLTE 125

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY+EE+A KA LR G+CYGCKDT+SNIVDNTLAFL
Sbjct: 126  SQLEELVLSNLDAIFKSAIKKIVACGYTEEIATKAVLRSGLCYGCKDTVSNIVDNTLAFL 185

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G ++ SS D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 186  R-SGQDINSSRD-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 243

Query: 377  CAMDVGPSNSFCGEENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP------NHL 216
            C+MD  P + F G+E +  SS ST++ LK E KSS      +++ P P KP      +H 
Sbjct: 244  CSMDGDPLSGFVGDEASNGSS-STSNLLKTEAKSS------DMNFPNPCKPVPCIPCSHS 296

Query: 215  TVQR----------KERSSSSTDAV----EEPSTVSGKCVSTISHSSVFQSSAPEEKSNG 78
            ++ +          K ++S     +    E  S++S     T   +   QSS  EEK  G
Sbjct: 297  SLPKAPSMGVNSTTKSKNSLVLSGIVSEKEGTSSISDSADKTFCAAGTSQSSTLEEKFVG 356

Query: 77   SRKGRTNKREPALRQSPTHMEKMY 6
            SRK  + KRE  LRQ   H+EK Y
Sbjct: 357  SRKIHSTKREYILRQKSLHLEKNY 380


>ref|XP_007035383.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao]
            gi|590660380|ref|XP_007035386.1| RING/U-box superfamily
            protein, putative isoform 1 [Theobroma cacao]
            gi|590660383|ref|XP_007035387.1| RING/U-box superfamily
            protein, putative isoform 1 [Theobroma cacao]
            gi|508714412|gb|EOY06309.1| RING/U-box superfamily
            protein, putative isoform 1 [Theobroma cacao]
            gi|508714415|gb|EOY06312.1| RING/U-box superfamily
            protein, putative isoform 1 [Theobroma cacao]
            gi|508714416|gb|EOY06313.1| RING/U-box superfamily
            protein, putative isoform 1 [Theobroma cacao]
          Length = 893

 Score =  283 bits (724), Expect = 2e-73
 Identities = 176/384 (45%), Positives = 230/384 (59%), Gaps = 28/384 (7%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEF--GKSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    D  K++   Q ++P++EF   K   +P   Q S C   G N 
Sbjct: 21   QEKGSRNKRKFRADPPLGDPNKIIPSPQNEYPSYEFCAEKFEITPVHGQASACDLCGVNQ 80

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E EADE QD DWSD T+
Sbjct: 81   DHSDGLKLDLGLSSTVGSSE---------------VGPSQPREEIEADEYQDADWSDLTE 125

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY+EE+A KA LR G+CYGCKDT+SNIVDNTLAFL
Sbjct: 126  SQLEELVLSNLDAIFKSAIKKIVACGYTEEIATKAVLRSGLCYGCKDTVSNIVDNTLAFL 185

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G ++ SS D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 186  R-SGQDINSSRD-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 243

Query: 377  CAMDVGPSNSFCGEENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP------NHL 216
            C+MD  P + F G+E +  SS ST++ LK E KSS      +++ P P KP      +H 
Sbjct: 244  CSMDGDPLSGFVGDEASNGSS-STSNLLKTEAKSS------DMNFPNPCKPVPCIPCSHS 296

Query: 215  TVQR----------KERSSSSTDAV----EEPSTVSGKCVSTISHSSVFQSSAPEEKSNG 78
            ++ +          K ++S     +    E  S++S     T   +   QSS  EEK  G
Sbjct: 297  SLPKAPSMGVNSTTKSKNSLVLSGIVSEKEGTSSISDSADKTFCAAGTSQSSTLEEKFVG 356

Query: 77   SRKGRTNKREPALRQSPTHMEKMY 6
            SRK  + KRE  LRQ   H+EK Y
Sbjct: 357  SRKIHSTKREYILRQKSLHLEKNY 380


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
            gi|223543912|gb|EEF45438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 894

 Score =  271 bits (694), Expect = 6e-70
 Identities = 180/400 (45%), Positives = 230/400 (57%), Gaps = 44/400 (11%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    D GK++   Q +   +EF   K   +P+    SVC   G N 
Sbjct: 24   QEKGSRNKRKFRADTPLGDPGKIIPSPQNECSGYEFSAEKFEATPAHGPSSVCDLCGVNQ 83

Query: 917  N-----KLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDW 753
            +     KL+    +  S    GT  P                    R+E E++E  D DW
Sbjct: 84   DHSEGLKLDLGLSSALSSSEVGTSQP--------------------REELESEESHDADW 123

Query: 752  SDTTQSQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDN 573
            SD T+SQLEEL L+NLD IFK+AI+KIV+ GY+EEVA KA LR G+CYGCKDT+SNIVDN
Sbjct: 124  SDLTESQLEELVLSNLDAIFKSAIKKIVACGYTEEVATKAVLRSGLCYGCKDTVSNIVDN 183

Query: 572  TLAFLKNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDM 393
            TLAFL+ NG E+  S D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDM
Sbjct: 184  TLAFLR-NGQEIDPSRD-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDM 241

Query: 392  NVSHACAMDVGPSNSFCGEENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSK----- 228
            NVSHACAMD  P + F G + T + + ST++Q ++E KSS      EL++P P K     
Sbjct: 242  NVSHACAMDGDPLSGFAG-DGTSNGTSSTSNQPQIESKSS------ELNLPNPCKSEPSV 294

Query: 227  -------PNHLT-----------------VQRKERSSSSTDAVEEPSTVSGKCVSTISHS 120
                   PN +T                 V  K+ S+S+ D+ ++  +V+G         
Sbjct: 295  TCSQSEAPNIMTRVPNISKPKNSVAVSGLVTEKDGSNSTFDSADKSFSVAG--------- 345

Query: 119  SVFQSSAPEEKSNGSRKGRTN--KREPALRQSPTHMEKMY 6
               QS   EEK   SRK  +N  KRE  LRQ   H+EK Y
Sbjct: 346  -TSQSPVVEEKLIVSRKVHSNSTKREYILRQKSLHLEKGY 384


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Vitis
            vinifera] gi|731389002|ref|XP_010649830.1| PREDICTED:
            putative E3 ubiquitin-protein ligase RF298 [Vitis
            vinifera]
          Length = 893

 Score =  270 bits (690), Expect = 2e-69
 Identities = 178/394 (45%), Positives = 216/394 (54%), Gaps = 37/394 (9%)
 Frame = -3

Query: 1076 AQDKGSRNKRKFGTEDSGKVLQQMDHPNFEFGKSYNSPSIKQQSVCTSRGFNYNKLETFT 897
            AQ+KGSRNKRKF  +        +  PN           +  Q  C S  F+  K E  T
Sbjct: 22   AQEKGSRNKRKFRADPP------LGDPN---------KIVSSQDQCLSYEFSAEKFEV-T 65

Query: 896  ENLNSLGSGGTCNP--------EXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTT 741
             +    G+ G CN         +                   RDE EAD+ QD DWSD T
Sbjct: 66   SSHGQPGACGMCNLNQDHSDGLKLDLGLSSAAGSSEVGPSQPRDELEADDFQDADWSDLT 125

Query: 740  QSQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAF 561
            +SQLEEL L+NLD IFK+AI+KIV+ GYSEEVA KA LR G+CYGCKDT+SNIVDNTLAF
Sbjct: 126  ESQLEELVLSNLDTIFKSAIKKIVACGYSEEVATKAVLRSGLCYGCKDTVSNIVDNTLAF 185

Query: 560  LKNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSH 381
            L+ NG E+  S + H+F+DLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSH
Sbjct: 186  LR-NGQEIDPSRE-HYFDDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSH 243

Query: 380  ACAMDVGPSNSFCGEE--NTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKPNHLTVQ 207
            ACAMD    +S    +  + GSSS S   Q K E KSS      EL++P P  P H ++ 
Sbjct: 244  ACAMDGDSFSSIVSGDGASNGSSSTSGQPQSKTEAKSS------ELNLPNPCNPVH-SIP 296

Query: 206  RKERSSSST-------------------------DAVEEPSTVSGKCVSTISHSSVFQSS 102
                S S T                         D +   S  + K  S    S   QS+
Sbjct: 297  CAHSSQSETPIASGVPNLAKPKNSLVLNGLVSEKDGLNNTSDTTDKSFSVTGTS---QSA 353

Query: 101  APEEKSNGSRKGRT--NKREPALRQSPTHMEKMY 6
            APEEK   SRK  +   KRE  LRQ   H+EK Y
Sbjct: 354  APEEKFGLSRKVHSGGTKRESMLRQKSLHLEKNY 387


>gb|KDO74932.1| hypothetical protein CISIN_1g002621mg [Citrus sinensis]
          Length = 726

 Score =  270 bits (689), Expect = 2e-69
 Identities = 170/387 (43%), Positives = 222/387 (57%), Gaps = 31/387 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    +  K++   Q + P +EF   K   +P   Q   C   G N 
Sbjct: 22   QEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQ 81

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E E +E QD DWSD T+
Sbjct: 82   DHSDGLKLDLGLSSAVGSSE---------------VGPSRPREELEVEEFQDADWSDLTE 126

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY EEVA KA LR G+CYG KDT+SNIVDNTLAFL
Sbjct: 127  SQLEELVLSNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFL 186

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+ SS + H+F+DL QLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 187  R-SGQEINSSRE-HYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 244

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P +SF G+  + G+S ++T  Q K E K S      EL++P PSKP        
Sbjct: 245  CAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCS------ELNLPNPSKPVPSIPCSH 298

Query: 224  ------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSN 81
                         ++T  +     S     +  +++S     T S +   QS A EEK  
Sbjct: 299  SSQPEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFV 358

Query: 80   GSRK--GRTNKREPALRQSPTHMEKMY 6
            GSRK    ++KRE  LRQ   H+EK Y
Sbjct: 359  GSRKVHSGSSKREYMLRQKSLHLEKHY 385


>gb|KDO74931.1| hypothetical protein CISIN_1g002621mg [Citrus sinensis]
          Length = 753

 Score =  270 bits (689), Expect = 2e-69
 Identities = 170/387 (43%), Positives = 222/387 (57%), Gaps = 31/387 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    +  K++   Q + P +EF   K   +P   Q   C   G N 
Sbjct: 22   QEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQ 81

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E E +E QD DWSD T+
Sbjct: 82   DHSDGLKLDLGLSSAVGSSE---------------VGPSRPREELEVEEFQDADWSDLTE 126

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY EEVA KA LR G+CYG KDT+SNIVDNTLAFL
Sbjct: 127  SQLEELVLSNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFL 186

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+ SS + H+F+DL QLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 187  R-SGQEINSSRE-HYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 244

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P +SF G+  + G+S ++T  Q K E K S      EL++P PSKP        
Sbjct: 245  CAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCS------ELNLPNPSKPVPSIPCSH 298

Query: 224  ------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSN 81
                         ++T  +     S     +  +++S     T S +   QS A EEK  
Sbjct: 299  SSQPEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFV 358

Query: 80   GSRK--GRTNKREPALRQSPTHMEKMY 6
            GSRK    ++KRE  LRQ   H+EK Y
Sbjct: 359  GSRKVHSGSSKREYMLRQKSLHLEKHY 385


>gb|KDO74929.1| hypothetical protein CISIN_1g002621mg [Citrus sinensis]
            gi|641856150|gb|KDO74930.1| hypothetical protein
            CISIN_1g002621mg [Citrus sinensis]
          Length = 899

 Score =  270 bits (689), Expect = 2e-69
 Identities = 170/387 (43%), Positives = 222/387 (57%), Gaps = 31/387 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    +  K++   Q + P +EF   K   +P   Q   C   G N 
Sbjct: 22   QEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQ 81

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E E +E QD DWSD T+
Sbjct: 82   DHSDGLKLDLGLSSAVGSSE---------------VGPSRPREELEVEEFQDADWSDLTE 126

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY EEVA KA LR G+CYG KDT+SNIVDNTLAFL
Sbjct: 127  SQLEELVLSNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFL 186

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+ SS + H+F+DL QLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 187  R-SGQEINSSRE-HYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 244

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P +SF G+  + G+S ++T  Q K E K S      EL++P PSKP        
Sbjct: 245  CAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCS------ELNLPNPSKPVPSIPCSH 298

Query: 224  ------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSN 81
                         ++T  +     S     +  +++S     T S +   QS A EEK  
Sbjct: 299  SSQPEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFV 358

Query: 80   GSRK--GRTNKREPALRQSPTHMEKMY 6
            GSRK    ++KRE  LRQ   H+EK Y
Sbjct: 359  GSRKVHSGSSKREYMLRQKSLHLEKHY 385


>ref|XP_006489216.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like isoform X3
            [Citrus sinensis]
          Length = 719

 Score =  270 bits (689), Expect = 2e-69
 Identities = 170/387 (43%), Positives = 222/387 (57%), Gaps = 31/387 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    +  K++   Q + P +EF   K   +P   Q   C   G N 
Sbjct: 22   QEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQ 81

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E E +E QD DWSD T+
Sbjct: 82   DHSDGLKLDLGLSSAVGSSE---------------VGPSRPREELEVEEFQDADWSDLTE 126

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY EEVA KA LR G+CYG KDT+SNIVDNTLAFL
Sbjct: 127  SQLEELVLSNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFL 186

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+ SS + H+F+DL QLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 187  R-SGQEINSSRE-HYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 244

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P +SF G+  + G+S ++T  Q K E K S      EL++P PSKP        
Sbjct: 245  CAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCS------ELNLPNPSKPVPSIPCSH 298

Query: 224  ------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSN 81
                         ++T  +     S     +  +++S     T S +   QS A EEK  
Sbjct: 299  SSQPEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFV 358

Query: 80   GSRK--GRTNKREPALRQSPTHMEKMY 6
            GSRK    ++KRE  LRQ   H+EK Y
Sbjct: 359  GSRKVHSGSSKREYMLRQKSLHLEKHY 385


>ref|XP_006489214.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like isoform X1
            [Citrus sinensis] gi|568872108|ref|XP_006489215.1|
            PREDICTED: putative E3 ubiquitin-protein ligase
            RF298-like isoform X2 [Citrus sinensis]
          Length = 899

 Score =  270 bits (689), Expect = 2e-69
 Identities = 170/387 (43%), Positives = 222/387 (57%), Gaps = 31/387 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    +  K++   Q + P +EF   K   +P   Q   C   G N 
Sbjct: 22   QEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQ 81

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E E +E QD DWSD T+
Sbjct: 82   DHSDGLKLDLGLSSAVGSSE---------------VGPSRPREELEVEEFQDADWSDLTE 126

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY EEVA KA LR G+CYG KDT+SNIVDNTLAFL
Sbjct: 127  SQLEELVLSNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFL 186

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+ SS + H+F+DL QLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 187  R-SGQEINSSRE-HYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 244

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P +SF G+  + G+S ++T  Q K E K S      EL++P PSKP        
Sbjct: 245  CAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCS------ELNLPNPSKPVPSIPCSH 298

Query: 224  ------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSN 81
                         ++T  +     S     +  +++S     T S +   QS A EEK  
Sbjct: 299  SSQPEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFV 358

Query: 80   GSRK--GRTNKREPALRQSPTHMEKMY 6
            GSRK    ++KRE  LRQ   H+EK Y
Sbjct: 359  GSRKVHSGSSKREYMLRQKSLHLEKHY 385


>ref|XP_006419748.1| hypothetical protein CICLE_v10004269mg [Citrus clementina]
            gi|567853171|ref|XP_006419749.1| hypothetical protein
            CICLE_v10004269mg [Citrus clementina]
            gi|567853173|ref|XP_006419750.1| hypothetical protein
            CICLE_v10004269mg [Citrus clementina]
            gi|557521621|gb|ESR32988.1| hypothetical protein
            CICLE_v10004269mg [Citrus clementina]
            gi|557521622|gb|ESR32989.1| hypothetical protein
            CICLE_v10004269mg [Citrus clementina]
            gi|557521623|gb|ESR32990.1| hypothetical protein
            CICLE_v10004269mg [Citrus clementina]
          Length = 900

 Score =  269 bits (688), Expect = 3e-69
 Identities = 169/387 (43%), Positives = 223/387 (57%), Gaps = 31/387 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQ--QMDHPNFEFG--KSYNSPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    +  K++   Q + P +EF   K   +P   Q   C   G N 
Sbjct: 23   QEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQ 82

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +  +    +L    + G+                       R+E E +E QD DWSD T+
Sbjct: 83   DHSDGLKLDLGLSSAVGSSE---------------VGPSQPREELEVEEFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            SQLEEL L+NLD IFK+AI+KIV+ GY+EEVA KA LR G+CYG KDT+SNIVDNTLAFL
Sbjct: 128  SQLEELVLSNLDAIFKSAIKKIVACGYTEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+ SS + H+F+DL QLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQEINSSRE-HYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P +SF G+  + G+S ++T  Q K E K S      EL++P PSKP        
Sbjct: 246  CAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCS------ELNLPNPSKPVPSIPCSH 299

Query: 224  ------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSN 81
                         ++T  +     S     +  +++S     T + +   QS A EEK  
Sbjct: 300  SSQPEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFTVAGTSQSPALEEKFV 359

Query: 80   GSRK--GRTNKREPALRQSPTHMEKMY 6
            GSRK    ++KRE  LRQ   H+EK Y
Sbjct: 360  GSRKVHSGSSKREYMLRQKSLHLEKHY 386


>ref|XP_008223058.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
            [Prunus mume]
          Length = 785

 Score =  268 bits (684), Expect = 9e-69
 Identities = 176/383 (45%), Positives = 214/383 (55%), Gaps = 27/383 (7%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTEDSGKVLQQMDHPNFEFGKSYNSPSIKQQSVCTSRGFNYNKLETFTE 894
            Q+KGSRNKRKF          + D P  +  K    P    Q+ CTS  F+  K E  T+
Sbjct: 23   QEKGSRNKRKF----------RADPPLGDPNKIIPLP----QTECTSYEFSAEKFE-ITQ 67

Query: 893  NLNSLGSGGTCNP--------EXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
                +G    C          +                   R+E EADE QD DWSD T+
Sbjct: 68   GHGQIGVCDLCTVNKDHSDGLKLDLGLSSTVGSSEVGPSRPREELEADEFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLD IFK+AI+KIV+ GY+EEVA KA LR G+CYGCKDT+SNIVDNTL FL
Sbjct: 128  TQLEELVLSNLDTIFKSAIKKIVACGYAEEVATKAVLRSGLCYGCKDTVSNIVDNTLNFL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+  S + H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQEIDPSRE-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKS----SITPSTPELDIPKPSK----- 228
            CAMD  P NSF  +  + GSSSV    Q K+E KS     ++PS P   IP         
Sbjct: 246  CAMDGDPLNSFMSDGASNGSSSVPNQPQSKIEAKSVELNLLSPSKPVPSIPGSHSSQYET 305

Query: 227  -------PNHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSNGSRK 69
                   PN    +     S S    E  ++ S     +   S   QSSA EEK   SRK
Sbjct: 306  PAIAGGVPNIAKPKNSLVQSGSFSEKEVTNSTSHNGDKSFGVSGTSQSSAVEEKLLSSRK 365

Query: 68   --GRTNKREPALRQSPTHMEKMY 6
                + KRE  LRQ P H+EK Y
Sbjct: 366  VHSVSTKREYMLRQKPLHLEKNY 388


>ref|XP_008223057.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
            [Prunus mume]
          Length = 930

 Score =  268 bits (684), Expect = 9e-69
 Identities = 176/383 (45%), Positives = 214/383 (55%), Gaps = 27/383 (7%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTEDSGKVLQQMDHPNFEFGKSYNSPSIKQQSVCTSRGFNYNKLETFTE 894
            Q+KGSRNKRKF          + D P  +  K    P    Q+ CTS  F+  K E  T+
Sbjct: 23   QEKGSRNKRKF----------RADPPLGDPNKIIPLP----QTECTSYEFSAEKFE-ITQ 67

Query: 893  NLNSLGSGGTCNP--------EXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
                +G    C          +                   R+E EADE QD DWSD T+
Sbjct: 68   GHGQIGVCDLCTVNKDHSDGLKLDLGLSSTVGSSEVGPSRPREELEADEFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLD IFK+AI+KIV+ GY+EEVA KA LR G+CYGCKDT+SNIVDNTL FL
Sbjct: 128  TQLEELVLSNLDTIFKSAIKKIVACGYAEEVATKAVLRSGLCYGCKDTVSNIVDNTLNFL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+  S + H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQEIDPSRE-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKS----SITPSTPELDIPKPSK----- 228
            CAMD  P NSF  +  + GSSSV    Q K+E KS     ++PS P   IP         
Sbjct: 246  CAMDGDPLNSFMSDGASNGSSSVPNQPQSKIEAKSVELNLLSPSKPVPSIPGSHSSQYET 305

Query: 227  -------PNHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKSNGSRK 69
                   PN    +     S S    E  ++ S     +   S   QSSA EEK   SRK
Sbjct: 306  PAIAGGVPNIAKPKNSLVQSGSFSEKEVTNSTSHNGDKSFGVSGTSQSSAVEEKLLSSRK 365

Query: 68   --GRTNKREPALRQSPTHMEKMY 6
                + KRE  LRQ P H+EK Y
Sbjct: 366  VHSVSTKREYMLRQKPLHLEKNY 388


>ref|XP_007225337.1| hypothetical protein PRUPE_ppa001026mg [Prunus persica]
            gi|462422273|gb|EMJ26536.1| hypothetical protein
            PRUPE_ppa001026mg [Prunus persica]
          Length = 930

 Score =  266 bits (680), Expect = 3e-68
 Identities = 178/388 (45%), Positives = 219/388 (56%), Gaps = 32/388 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTEDSGKVLQQMDHPNFEFGKSYNSPSIKQQSVCTSRGFNYNKLETFTE 894
            Q+KGSRNKRKF          + D P  +  K    P    Q+ CTS  F+  K E  T+
Sbjct: 23   QEKGSRNKRKF----------RADPPLGDPNKIIPLP----QTECTSYEFSAEKFE-ITQ 67

Query: 893  NLNSLGSGGTCNP--------EXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
                +G    C          +                   R+E EADE QD DWSD T+
Sbjct: 68   GHGQIGVCDLCTVNKDHSDGLKLDLGLSSTVGSSEVGPSRPREELEADEFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLD IFK+AI+KIV+ GY+EEVA KA LR G+CYGCKDT+SNIVDNTL FL
Sbjct: 128  TQLEELVLSNLDTIFKSAIKKIVACGYAEEVATKAVLRSGLCYGCKDTVSNIVDNTLNFL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+  S + H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQEIDPSRE-HCFEDLQQLEKYILAELVCVLREVRPFFSMGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKS----SITPS---------------T 258
            CAMD  P NSF  +  + GSSS     Q K+E KS     ++PS               T
Sbjct: 246  CAMDGDPLNSFMSDGASNGSSSTPNQPQSKIEAKSVELNLLSPSKPVPLIPGSHSSQYET 305

Query: 257  PEL--DIPKPSKPNHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEKS 84
            P +   +P  +KP +  VQ     S S    E  ++ S     +   S   QSSA EEK 
Sbjct: 306  PAIAGGVPNIAKPKNSLVQ-----SGSFSEKEITNSTSHNGDKSFGVSGTSQSSAVEEKL 360

Query: 83   NGSRK--GRTNKREPALRQSPTHMEKMY 6
             GSRK    + KRE  LRQ P H+EK Y
Sbjct: 361  LGSRKVHSVSAKREYMLRQKPLHLEKNY 388


>ref|XP_009352164.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4 isoform X2 [Pyrus
            x bretschneideri]
          Length = 767

 Score =  266 bits (679), Expect = 3e-68
 Identities = 175/389 (44%), Positives = 213/389 (54%), Gaps = 33/389 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTEDSGKVLQQMDHPNFEFGKSYNSPSIKQQSVCTSRGFNYNKLETFTE 894
            Q+KGSRNKRKF  +        +  PN     S        Q+ CTS  F+  K E   +
Sbjct: 40   QEKGSRNKRKFRAD------PPLGDPNKIIPLS--------QTECTSYEFSAEKFE-IRQ 84

Query: 893  NLNSLGSGGTCNP--------EXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +   +G G  C+         +                   R+E EADE QD DWSD T+
Sbjct: 85   SHGQIGVGDLCSVNQDHSDGLKFDLGLSSAVVPSEGSPSRPREELEADEFQDADWSDLTE 144

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLDMIFK+AI+KIV+ GY+EEVA KA LR G+CYGCKDT+SNIVDNTL +L
Sbjct: 145  TQLEELVLSNLDMIFKSAIKKIVACGYTEEVAAKAVLRSGLCYGCKDTVSNIVDNTLVYL 204

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+  S D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 205  R-SGQEIDPSRD-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 262

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P NSF  +  + GSSSV    Q K E KSS      EL++  PSKP        
Sbjct: 263  CAMDGDPLNSFISDGASNGSSSVPNQPQSKTETKSS------ELNLLNPSKPVPSVPGSH 316

Query: 224  --------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEK 87
                          N   ++     S S    E   + S     +   S  FQS   EEK
Sbjct: 317  SSQSETPTIAGGVSNIAKLKNSLVRSVSLSEKEGAQSTSENGDKSFGASGTFQSPVVEEK 376

Query: 86   SNGSRK--GRTNKREPALRQSPTHMEKMY 6
               SRK    T KRE  LR    H+EK Y
Sbjct: 377  LLSSRKLHSVTTKREYMLRHKSLHLEKSY 405


>ref|XP_009352162.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4 isoform X1 [Pyrus
            x bretschneideri]
          Length = 929

 Score =  266 bits (679), Expect = 3e-68
 Identities = 175/389 (44%), Positives = 213/389 (54%), Gaps = 33/389 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTEDSGKVLQQMDHPNFEFGKSYNSPSIKQQSVCTSRGFNYNKLETFTE 894
            Q+KGSRNKRKF  +        +  PN     S        Q+ CTS  F+  K E   +
Sbjct: 23   QEKGSRNKRKFRAD------PPLGDPNKIIPLS--------QTECTSYEFSAEKFE-IRQ 67

Query: 893  NLNSLGSGGTCNP--------EXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +   +G G  C+         +                   R+E EADE QD DWSD T+
Sbjct: 68   SHGQIGVGDLCSVNQDHSDGLKFDLGLSSAVVPSEGSPSRPREELEADEFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLDMIFK+AI+KIV+ GY+EEVA KA LR G+CYGCKDT+SNIVDNTL +L
Sbjct: 128  TQLEELVLSNLDMIFKSAIKKIVACGYTEEVAAKAVLRSGLCYGCKDTVSNIVDNTLVYL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G E+  S D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQEIDPSRD-HCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP-------- 225
            CAMD  P NSF  +  + GSSSV    Q K E KSS      EL++  PSKP        
Sbjct: 246  CAMDGDPLNSFISDGASNGSSSVPNQPQSKTETKSS------ELNLLNPSKPVPSVPGSH 299

Query: 224  --------------NHLTVQRKERSSSSTDAVEEPSTVSGKCVSTISHSSVFQSSAPEEK 87
                          N   ++     S S    E   + S     +   S  FQS   EEK
Sbjct: 300  SSQSETPTIAGGVSNIAKLKNSLVRSVSLSEKEGAQSTSENGDKSFGASGTFQSPVVEEK 359

Query: 86   SNGSRK--GRTNKREPALRQSPTHMEKMY 6
               SRK    T KRE  LR    H+EK Y
Sbjct: 360  LLSSRKLHSVTTKREYMLRHKSLHLEKSY 388


>ref|XP_012482058.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
            [Gossypium raimondii]
          Length = 745

 Score =  260 bits (664), Expect = 2e-66
 Identities = 167/388 (43%), Positives = 219/388 (56%), Gaps = 32/388 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQQMDH--PNFEF-GKSYNSPSIKQQS----VCTSRG 927
            Q+KGSRNKRKF  +    D  K++    +  P++EF  + +    +  Q+    +C+   
Sbjct: 22   QEKGSRNKRKFRADLPLGDQNKIITSPQNGCPSYEFCAEKFEITPVHGQASAYDLCSVSQ 81

Query: 926  FNYNKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSD 747
             +   L+      ++LGS                          ++E EADE QD DWSD
Sbjct: 82   DHSGGLKLDLRLSSTLGSSEV------------------GPSRAKEELEADEFQDADWSD 123

Query: 746  TTQSQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTL 567
             T+SQLEEL L+NLD IFK+AI+KIV+YGY+EE+  KA LR G+CYGCKDT+SNIVDNTL
Sbjct: 124  LTESQLEELVLSNLDTIFKSAIKKIVAYGYTEEIVTKAVLRSGLCYGCKDTVSNIVDNTL 183

Query: 566  AFLKNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNV 387
            A+L+ +G +   S D H+FEDLQQ+E+Y+L E+VCVLREV+PFFS GDAMWCLL+CDMNV
Sbjct: 184  AYLR-SGQDYNPSRD-HYFEDLQQMEKYILTELVCVLREVRPFFSTGDAMWCLLICDMNV 241

Query: 386  SHACAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP----- 225
            SHACAMD  P + F G+  + G S  S   QLK E K+S      EL++P P +P     
Sbjct: 242  SHACAMDGDPLSGFAGDGGSNGISFSSNQPQLKPEAKTS------ELNLPNPCRPVPSFP 295

Query: 224  -NHLTVQRKERSSSSTDAVEEPSTVSGKCVS--------------TISHSSVFQSSAPEE 90
             +H +      +  S     + S V    VS              T S     Q S  EE
Sbjct: 296  CSHSSPPEVPSTGISNTTKSKNSVVLSGIVSEKEGTNSTADSADKTFSAGGTSQFSTMEE 355

Query: 89   KSNGSRKGRTNKREPALRQSPTHMEKMY 6
            K  GSRK  + KRE  LRQ   H+EK Y
Sbjct: 356  KFVGSRKTHSTKRE-FLRQKSLHLEKNY 382


>ref|XP_012482054.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
            [Gossypium raimondii] gi|823164216|ref|XP_012482055.1|
            PREDICTED: putative E3 ubiquitin-protein ligase RF298
            isoform X1 [Gossypium raimondii]
            gi|823164218|ref|XP_012482056.1| PREDICTED: putative E3
            ubiquitin-protein ligase RF298 isoform X1 [Gossypium
            raimondii] gi|763761312|gb|KJB28566.1| hypothetical
            protein B456_005G056100 [Gossypium raimondii]
            gi|763761313|gb|KJB28567.1| hypothetical protein
            B456_005G056100 [Gossypium raimondii]
            gi|763761314|gb|KJB28568.1| hypothetical protein
            B456_005G056100 [Gossypium raimondii]
          Length = 889

 Score =  260 bits (664), Expect = 2e-66
 Identities = 167/388 (43%), Positives = 219/388 (56%), Gaps = 32/388 (8%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQQMDH--PNFEF-GKSYNSPSIKQQS----VCTSRG 927
            Q+KGSRNKRKF  +    D  K++    +  P++EF  + +    +  Q+    +C+   
Sbjct: 22   QEKGSRNKRKFRADLPLGDQNKIITSPQNGCPSYEFCAEKFEITPVHGQASAYDLCSVSQ 81

Query: 926  FNYNKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSD 747
             +   L+      ++LGS                          ++E EADE QD DWSD
Sbjct: 82   DHSGGLKLDLRLSSTLGSSEV------------------GPSRAKEELEADEFQDADWSD 123

Query: 746  TTQSQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTL 567
             T+SQLEEL L+NLD IFK+AI+KIV+YGY+EE+  KA LR G+CYGCKDT+SNIVDNTL
Sbjct: 124  LTESQLEELVLSNLDTIFKSAIKKIVAYGYTEEIVTKAVLRSGLCYGCKDTVSNIVDNTL 183

Query: 566  AFLKNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNV 387
            A+L+ +G +   S D H+FEDLQQ+E+Y+L E+VCVLREV+PFFS GDAMWCLL+CDMNV
Sbjct: 184  AYLR-SGQDYNPSRD-HYFEDLQQMEKYILTELVCVLREVRPFFSTGDAMWCLLICDMNV 241

Query: 386  SHACAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSSITPSTPELDIPKPSKP----- 225
            SHACAMD  P + F G+  + G S  S   QLK E K+S      EL++P P +P     
Sbjct: 242  SHACAMDGDPLSGFAGDGGSNGISFSSNQPQLKPEAKTS------ELNLPNPCRPVPSFP 295

Query: 224  -NHLTVQRKERSSSSTDAVEEPSTVSGKCVS--------------TISHSSVFQSSAPEE 90
             +H +      +  S     + S V    VS              T S     Q S  EE
Sbjct: 296  CSHSSPPEVPSTGISNTTKSKNSVVLSGIVSEKEGTNSTADSADKTFSAGGTSQFSTMEE 355

Query: 89   KSNGSRKGRTNKREPALRQSPTHMEKMY 6
            K  GSRK  + KRE  LRQ   H+EK Y
Sbjct: 356  KFVGSRKTHSTKRE-FLRQKSLHLEKNY 382


>gb|KHG03767.1| E3 ubiquitin-protein ligase protein [Gossypium arboreum]
          Length = 879

 Score =  259 bits (663), Expect = 2e-66
 Identities = 169/379 (44%), Positives = 220/379 (58%), Gaps = 23/379 (6%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQQMDH--PNFEF-GKSYN-SPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    D  K++    +  P++EF  + ++ +P   Q S C   G N 
Sbjct: 23   QEKGSRNKRKFRADPPLGDPNKIITSPQNGCPSYEFCAERFDVNPVHGQASACDLCGVNQ 82

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +       +L    + G+                       R+E EAD  QD DWSD T+
Sbjct: 83   DHSNGLKLDLGLSSTLGSSEA---------------WPSQPREEIEADGFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLD IFK+AI+KIV+ GY+EE+A KA LR G+CYGCKDT+SNIVDNTLA+L
Sbjct: 128  AQLEELVLSNLDAIFKSAIKKIVACGYAEEMAIKAVLRSGLCYGCKDTVSNIVDNTLAYL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G + + S D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQDCIPSRD-HCFEDLQQLEKYILAELVCVLREVRPFFSIGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGE-ENTGSSSVSTASQLKLEGKSS---------ITPSTPELDIPKPSK 228
            CAMD  P+N F G+  + G+S       LK E K+S           PS P    P P  
Sbjct: 246  CAMDGDPTNGFAGDGGSNGTSFTFNQPALKTEAKTSELNLPSPCKPVPSIPCSHSPLPDV 305

Query: 227  PN---HLTVQRKERSSSSTDAVEEPST--VSGKCVSTISHSSVFQSSAPEEKSNGSRKGR 63
            P+   + T + K     S  A E+  T  +S     T + +   QSS  EEK  G RK  
Sbjct: 306  PSIGINNTTKSKNSLVLSGIASEKDGTNSISDSADKTFTAAGTSQSSTLEEKFVG-RKIH 364

Query: 62   TNKREPALRQSPTHMEKMY 6
            ++KRE  LRQ   H +K Y
Sbjct: 365  SSKREHILRQKSLHPDKNY 383


>gb|KJB38485.1| hypothetical protein B456_006G256200 [Gossypium raimondii]
          Length = 753

 Score =  259 bits (662), Expect = 3e-66
 Identities = 166/379 (43%), Positives = 218/379 (57%), Gaps = 23/379 (6%)
 Frame = -3

Query: 1073 QDKGSRNKRKFGTE----DSGKVLQQMDH--PNFEF-GKSYN-SPSIKQQSVCTSRGFNY 918
            Q+KGSRNKRKF  +    D  K++    +  P++EF  + ++ +P   Q S C   G N 
Sbjct: 23   QEKGSRNKRKFRADPPLGDPNKIITSPQNGCPSYEFCAERFDVNPVHGQASACDLCGVNQ 82

Query: 917  NKLETFTENLNSLGSGGTCNPEXXXXXXXXXXXXXXXXXXYRDESEADEIQDTDWSDTTQ 738
            +       +L    + G+                       R+E EAD  QD DWSD T+
Sbjct: 83   DHSNGLKLDLGLSSTLGSSEA---------------WPSQPREEIEADGFQDADWSDLTE 127

Query: 737  SQLEELSLTNLDMIFKNAIQKIVSYGYSEEVARKATLRLGVCYGCKDTISNIVDNTLAFL 558
            +QLEEL L+NLD IFK+AI+KIV+ GY+EE+A KA LR G+CYGCKDT+SNIVDNTLA+L
Sbjct: 128  AQLEELVLSNLDAIFKSAIKKIVACGYTEEMAIKAVLRSGLCYGCKDTVSNIVDNTLAYL 187

Query: 557  KNNGPEVVSSGDFHFFEDLQQLERYMLAEMVCVLREVKPFFSAGDAMWCLLMCDMNVSHA 378
            + +G + + S D H FEDLQQLE+Y+LAE+VCVLREV+PFFS GDAMWCLL+CDMNVSHA
Sbjct: 188  R-SGQDCIPSKD-HCFEDLQQLEKYILAELVCVLREVRPFFSIGDAMWCLLICDMNVSHA 245

Query: 377  CAMDVGPSNSFCGEENTGSSSV----------STASQLKLEGKSSITPSTPELDIPKPSK 228
            CAMD  P+N F G+  +  +S           +  S+L L       PS P    P P  
Sbjct: 246  CAMDGDPTNGFAGDGGSNGTSFTFNQPVLKTEAKTSELNLPSPCKPVPSIPCSHSPVPDV 305

Query: 227  PN---HLTVQRKERSSSSTDAVEEPST--VSGKCVSTISHSSVFQSSAPEEKSNGSRKGR 63
            P+   + T + K     S  A E+  T  +S     T + +   QSS  EEK  G RK  
Sbjct: 306  PSIGINNTTKSKNSLVLSGIASEKDGTNSISDSADKTFTAAGTSQSSTLEEKFVG-RKIH 364

Query: 62   TNKREPALRQSPTHMEKMY 6
            ++KRE  LRQ   H +K Y
Sbjct: 365  SSKREHILRQKSLHPDKNY 383