BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00011009
         (1630 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   632   e-178
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   619   e-174
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   611   e-172
ref|XP_012492333.1| PREDICTED: RNA polymerase sigma factor sigA-...   608   e-171
gb|KHG03684.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   602   e-169
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   600   e-169
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   598   e-168
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   595   e-167
gb|AKC88633.1| sigma factor [Melianthus villosus]                     594   e-167
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   593   e-166
ref|XP_012492331.1| PREDICTED: RNA polymerase sigma factor sigA-...   593   e-166
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   593   e-166
ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA ...   591   e-166
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   591   e-166
ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA ...   586   e-164
ref|XP_006878659.1| PREDICTED: RNA polymerase sigma factor sigA ...   585   e-164
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   583   e-163
gb|AKC88628.1| sigma factor [Francoa sonchifolia]                     580   e-162
ref|XP_009361126.1| PREDICTED: RNA polymerase sigma factor sigA ...   579   e-162
ref|XP_008462812.1| PREDICTED: RNA polymerase sigma factor sigA ...   577   e-162

>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  632 bits (1630), Expect = e-178
 Identities = 332/451 (73%), Positives = 371/451 (82%), Gaps = 7/451 (1%)
 Frame = -1

Query: 1630 NFGPGFPLNRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQK 1451
            NFG  FP N+H QS++A +EHVNT STPSTA+ W +S  LL++ + D + S++ L+LLQK
Sbjct: 56   NFGDSFPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQK 115

Query: 1450 SMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQTTPMIQQG-K 1280
             +LE  WNLS  QT    A G E  KKI+V               R  +     I Q  K
Sbjct: 116  FLLEKQWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSIMQPTK 175

Query: 1279 RKYLGSMLQGQLK----GYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGC 1112
            RK LGSM+  +L     GYVKGV S++LL+H+EV+ LSK+IKAGLSLE+H+ RLK RLGC
Sbjct: 176  RKQLGSMVSPELLKSHYGYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRLKERLGC 235

Query: 1111 DPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQG 932
            DPSDEQLASSLR+SRAEL  K+IECSLAREKL MSNVRLVMSIAQKYDN+GAEMADLVQG
Sbjct: 236  DPSDEQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEMADLVQG 295

Query: 931  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAK 752
            GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERLCLIRNAK
Sbjct: 296  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLCLIRNAK 355

Query: 751  IRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIA 572
            IRL EKGITPSIDRIAE LNMS+KKVRNATEAV+KVFSLDR+AFPSL+GLP ETLHSYIA
Sbjct: 356  IRLAEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSLNGLPRETLHSYIA 415

Query: 571  DNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLS 392
            DN LENNPWHGVDEW LKDEVN L+STTL ERERDI+RLYYGLDKE LTWEDIS++IGLS
Sbjct: 416  DNRLENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIRLYYGLDKECLTWEDISRRIGLS 475

Query: 391  RERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            RERVRQVGLVALEKLKHAARKK L+ ML+KH
Sbjct: 476  RERVRQVGLVALEKLKHAARKKRLDTMLVKH 506


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  619 bits (1595), Expect = e-174
 Identities = 322/452 (71%), Positives = 375/452 (82%), Gaps = 8/452 (1%)
 Frame = -1

Query: 1630 NFGPGFPLNRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQK 1451
            NF   F  NRH QS+KA +EH+NT ST ST + W ++ D L++ + D + SLE L+LLQK
Sbjct: 66   NFDHDFASNRHNQSIKALKEHLNTFST-STEDMWLQTSDHLEEGNSDLDYSLEALLLLQK 124

Query: 1450 SMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQT-TPMIQQGK 1280
            S+LE  WNLS  ++ +  A   E  KKI+V               +  + T + M+Q  +
Sbjct: 125  SLLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTTR 184

Query: 1279 RKYLGSM-----LQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLG 1115
            R++LGSM     LQ +LKGYVKGV S++LL+HSEV+ LSK+IK G+SLE+H+ RLK RLG
Sbjct: 185  RRHLGSMVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHKMRLKERLG 244

Query: 1114 CDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQ 935
            C+PSDEQLA+SLR+SRAEL +KMIECSLAREK+AMSNVRLVMSIA KYDN+GAEMADLVQ
Sbjct: 245  CEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMGAEMADLVQ 304

Query: 934  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNA 755
            GGLIGLLRGIEKFDSSKG KISTYVYWWIRQGVSRALVENSR LRLP+H+HERL LIRNA
Sbjct: 305  GGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHERLSLIRNA 364

Query: 754  KIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYI 575
            KIRLEEKGITPSIDRIAE LN+SQKKVRNATEAV+KV SLDR+AFPSL+GLPGETLHSYI
Sbjct: 365  KIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSLNGLPGETLHSYI 424

Query: 574  ADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGL 395
            ADN +ENNPWHGVDEW LKDEVN L++TTL ERERDI+RLYYGLD+E LTWEDIS++IGL
Sbjct: 425  ADNRIENNPWHGVDEWSLKDEVNNLLNTTLRERERDIIRLYYGLDEECLTWEDISRRIGL 484

Query: 394  SRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            SRERVRQVGLVALEKLKHAARKK L+AML+KH
Sbjct: 485  SRERVRQVGLVALEKLKHAARKKRLDAMLVKH 516


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  611 bits (1575), Expect = e-172
 Identities = 326/453 (71%), Positives = 373/453 (82%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+GP FP  NR+TQS+KA +EHV+T+S PSTA T  ++ + +++   D + S+E L+LLQ
Sbjct: 56   NYGPSFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQ 115

Query: 1453 KSMLENLWNLSCNQTRKLDAGG--AEKKIEVIXXXXXXXXXXXXXXRA-LIQTTPMIQQG 1283
            KSMLE  WNLS  +T   D+    ++KKI V               R  L Q+   +Q  
Sbjct: 116  KSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQAN 175

Query: 1282 KRKYLGS-----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K L S     +LQ +LKGYVKGV S++LLSH+EV+ LS+ IKAGLSLE H+SRLK RL
Sbjct: 176  VFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERL 235

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GCDPSDEQ+A+SL++SRAEL  K I CSLAREKLAMSNVRLVMSIAQ+YDN+GAEMADLV
Sbjct: 236  GCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 295

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AKIRLEEKG+TPSIDRIAESLN+SQKKVRNATEAVSKVFSLDR+AFPSL+GLPGET HSY
Sbjct: 356  AKIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSY 415

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN LENNPWHGVD+W LKDEVNKLI+ TL ERE++I+RLYYGLD ESLTWEDISK+IG
Sbjct: 416  IADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIG 475

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARKK LEAML+KH
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>ref|XP_012492333.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium raimondii] gi|763777227|gb|KJB44350.1|
            hypothetical protein B456_007G247500 [Gossypium
            raimondii]
          Length = 508

 Score =  608 bits (1567), Expect = e-171
 Identities = 316/443 (71%), Positives = 366/443 (82%), Gaps = 7/443 (1%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLWN 1427
            NRHTQS+KAF+EHV+T+S+ ST E W    + L++   D + S+E L+LLQKSMLE  W 
Sbjct: 66   NRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 1426 LSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQTTPMIQQGKRKYLGSM-- 1259
            LS  +T   ++   +   K+ V               R ++     + Q   K L S+  
Sbjct: 126  LSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQPNAKQLRSLIG 185

Query: 1258 ---LQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDEQLA 1088
               LQ +LKGYVKGV S+DLLSH+EV+ LS++IKAGLSLE+HR RLK RLGC+PSDEQLA
Sbjct: 186  PELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCEPSDEQLA 245

Query: 1087 SSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGLLRG 908
            +SL++SRAEL  + IECSLAREKLAMSNVRLVMSIAQ+YDN+GAEM+DL+QGGLIGLLRG
Sbjct: 246  TSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRG 305

Query: 907  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEEKGI 728
            IEKFDSSKG+KISTYVYWWIRQGVSRALVENSR LRLP +LHERL LIRNAK RLEEKGI
Sbjct: 306  IEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYRLEEKGI 365

Query: 727  TPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIADNNLENNP 548
            TP+IDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSL+GLPGET HSYIADN++ENNP
Sbjct: 366  TPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENNP 425

Query: 547  WHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSRERVRQVG 368
            WHGVDEW LKDEVN+LI+ TLGERER+I+RLY+GLDKESLTWEDISK+IGLSRERVRQVG
Sbjct: 426  WHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRERVRQVG 485

Query: 367  LVALEKLKHAARKKGLEAMLLKH 299
            LVALEKLKHAARKK +EAML+KH
Sbjct: 486  LVALEKLKHAARKKKMEAMLVKH 508


>gb|KHG03684.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
            gi|728838604|gb|KHG18047.1| RNA polymerase sigma factor
            rpoD [Gossypium arboreum]
          Length = 508

 Score =  602 bits (1552), Expect = e-169
 Identities = 314/443 (70%), Positives = 363/443 (81%), Gaps = 7/443 (1%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLWN 1427
            NRHTQ +KAF+ HV+T+S+ ST E W    + L++   D + S+E L+LLQKSMLE  W 
Sbjct: 66   NRHTQLIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSMLEKQWT 125

Query: 1426 LSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQTTPMIQQGKRKYLGSM-- 1259
            LS  +T  +++   +   K+ V               R ++     + Q   K L S+  
Sbjct: 126  LSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNAKQLRSLIG 185

Query: 1258 ---LQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDEQLA 1088
               LQ +LKGYVKGV S+DLLSH+EV+ LSK+IKAGLSLE+H  RLK RLGC+PSDEQLA
Sbjct: 186  PELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEPSDEQLA 245

Query: 1087 SSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGLLRG 908
            +SL++SRAEL  + IECSLAREKLAMSNVRLVMSIAQ+YDN+GAEM+DL+QGGLIGLLRG
Sbjct: 246  TSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRG 305

Query: 907  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEEKGI 728
            IEKFDSSKG+KISTYVYWWIRQGVSRALVENSR LRLP +LHERL LIRNAK RLEEKGI
Sbjct: 306  IEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYRLEEKGI 365

Query: 727  TPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIADNNLENNP 548
            TP+IDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSL+GLPGET HSYIADN++ENNP
Sbjct: 366  TPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENNP 425

Query: 547  WHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSRERVRQVG 368
            WHGVDEW LKDEVN+LI  TLGERER+I+RLY+GLDKESLTWEDISK+IGLSRERVRQVG
Sbjct: 426  WHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRERVRQVG 485

Query: 367  LVALEKLKHAARKKGLEAMLLKH 299
            LVALEKLKHAARKK +EAML+KH
Sbjct: 486  LVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
            gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
            [Theobroma cacao]
          Length = 508

 Score =  600 bits (1548), Expect = e-169
 Identities = 318/443 (71%), Positives = 363/443 (81%), Gaps = 7/443 (1%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLWN 1427
            NR  QS+KA +EHV+++S  STAE   +  + L+    D + S+E L+LLQKSMLE  W 
Sbjct: 66   NRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 1426 LSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQTTPMIQQGKRKYLGSM-- 1259
            LS  +T   ++   +  KKI V               R ++     I Q   K L S+  
Sbjct: 126  LSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLIS 185

Query: 1258 ---LQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDEQLA 1088
               LQ +LKGYVKGV S +LLSH+EV+ LSK+IKAGLSLE+HR RLK RLGC+PSDEQLA
Sbjct: 186  PELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSDEQLA 245

Query: 1087 SSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGLLRG 908
            +SL++SRAEL  K+IECSLAREKLAMSNVRLVMSIAQ+YDN+GAEM+DL+QGGLIGLLRG
Sbjct: 246  TSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRG 305

Query: 907  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEEKGI 728
            IEKFDSSKG+KISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRNAKIRLEEKGI
Sbjct: 306  IEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGI 365

Query: 727  TPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIADNNLENNP 548
            TP+IDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSL+GLPGET HSYIADN++EN P
Sbjct: 366  TPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENIP 425

Query: 547  WHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSRERVRQVG 368
            WHGVDEW LKDEVN+LI+ TLGERER+I+RLYYGLDKESLTWEDISK+IGLSRERVRQVG
Sbjct: 426  WHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVG 485

Query: 367  LVALEKLKHAARKKGLEAMLLKH 299
            LVALEKLKHAARKK +EAML+KH
Sbjct: 486  LVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
            polymerase sigma factor sigA [Jatropha curcas]
            gi|643732469|gb|KDP39565.1| hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  598 bits (1541), Expect = e-168
 Identities = 319/453 (70%), Positives = 369/453 (81%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+G  F   NR+ QS+KA +EHV+T+S+PSTA T   +   +++   D + S+E L+LLQ
Sbjct: 56   NYGSSFQSSNRNAQSIKALKEHVDTASSPSTAATGFETFVDIEEASSDLDYSVEALLLLQ 115

Query: 1453 KSMLENLWNLSCNQTRKLDAGG--AEKKIEVIXXXXXXXXXXXXXXRA-LIQTTPMIQQG 1283
            KSMLE  WNLS  +T   D+    ++K+I +               R  LIQ+  ++Q  
Sbjct: 116  KSMLEKQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQAS 175

Query: 1282 KRKYLGS-----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K L S     +L  +LKGYVKG+ S++LL+H+EV+ LS+ IKAGLSLE+H+SRLK RL
Sbjct: 176  GFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRL 235

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GCDPSDEQLA+SLR+S A+L  K+I CSLAREKLAMSNVRLVMSIAQ+YDN+GAEMADLV
Sbjct: 236  GCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 295

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AKIRLEEKG+TPSIDRIAESLNMSQKKVRNATEA+SKVFSLDR+AFPSL+GLPGET HSY
Sbjct: 356  AKIRLEEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSY 415

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN  ENNPWHGVDEW LKDEVNKLI  TL +RER+I+RLYYGLD E+LTWEDISK+IG
Sbjct: 416  IADNCPENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLTWEDISKRIG 475

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARKK LEAML+KH
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
            gi|641828897|gb|KDO48033.1| hypothetical protein
            CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  595 bits (1535), Expect = e-167
 Identities = 311/453 (68%), Positives = 364/453 (80%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+ P FP  NR TQ +KA +EHV+T+   STAE W   P+ +++   + + S+E L+LLQ
Sbjct: 57   NYNPSFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPPNSIEEESSELDYSVEALLLLQ 115

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALI-QTTPMIQQG 1283
            KSMLE  WNLS  +T   D+   +  KK+ V               + ++ Q   ++QQ 
Sbjct: 116  KSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQN 175

Query: 1282 KRKYLGSML-----QGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K L SM+     Q +LKGYVKGV S++LL+H+EV+ LSK+IK GLSL+ H+ RLK RL
Sbjct: 176  GSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PS EQLA+SLR+SR EL   ++ECSLAREKL MSNVRLVMSIAQ+YDN+GA+MADLV
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLV 295

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AK+RLEEKG+TPS+DRIAE LNMSQKKVRNATEA+ KVFSLDR+AFPSL+GLPGET HSY
Sbjct: 356  AKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN +ENNPWHGVD+W LKDEVNKLI  TLGERER+I+RLYYGLDKE LTWEDISK+IG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARKK +EAML+KH
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>gb|AKC88633.1| sigma factor [Melianthus villosus]
          Length = 506

 Score =  594 bits (1532), Expect = e-167
 Identities = 312/453 (68%), Positives = 368/453 (81%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N  P FP  NR TQS+KA +EHV+  S PSTAE+W +  + +D+ + D E S+E L+LLQ
Sbjct: 54   NCSPRFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQ 113

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALI-QTTPMIQQG 1283
            KSMLE  WNLS ++T   D    +  K+I V               R ++ + + M+Q  
Sbjct: 114  KSMLEKQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSMMQTS 173

Query: 1282 K----RKYLG-SMLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
            +    R  +G  ++Q + KGYVKGV S++LLSH+EV+HLSK+IK GLSLE+H+ RLK RL
Sbjct: 174  RCNRLRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRL 233

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PSDEQLA+SLR+SRAEL  K IE  LAREKLAMSNVRLVMSIAQ+YDN+GAEM+DLV
Sbjct: 234  GCEPSDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLV 293

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR LRLP HLHERL LIRN
Sbjct: 294  QGGLIGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRN 353

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AKIRLEEKGITPSI+R+AE LNMS+KK+RNATEA+SKVFSLDR+AFPSL+GLPGET HSY
Sbjct: 354  AKIRLEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSY 413

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN L+NNPWHGVDEW LKDEV KLI  TLGERER+I+RLY+GLD E LTWEDISK+IG
Sbjct: 414  IADNCLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIG 473

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVA+EKLKHAAR+K +EAML+KH
Sbjct: 474  LSRERVRQVGLVAMEKLKHAARRKHMEAMLVKH 506


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  593 bits (1530), Expect = e-166
 Identities = 309/453 (68%), Positives = 363/453 (80%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+ P FP  NR TQ +KA +EHV+T+   STAE W   P+ +++   + + S+E L+LLQ
Sbjct: 57   NYNPSFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPPNSIEEESSELDYSVEALLLLQ 115

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALI-QTTPMIQQG 1283
            KSMLE  WNLS  +T   D+   +  KK+ V               + ++ Q   ++QQ 
Sbjct: 116  KSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQN 175

Query: 1282 KRKYLGSML-----QGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K L SM+     Q  LKGYVKGV S++LL+H+EV+ LSK+IK GLSL+ H+ RLK RL
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PS EQLA+SLR+SR EL   ++ECSLAREKL MSNVRLVMSIAQ+YDN+GA+MADL+
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLI 295

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AK+RLEEKG+TP++DRIAE LNMSQKKVRNATEA+ KVFSLDR+AFPSL+GLPGET HSY
Sbjct: 356  AKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN +ENNPWHGVD+W LKDEVNKLI  TLGERER+I+RLYYGLDKE LTWEDISK+IG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARKK +EAML+KH
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_012492331.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
            [Gossypium raimondii] gi|823194413|ref|XP_012492332.1|
            PREDICTED: RNA polymerase sigma factor sigA-like isoform
            X1 [Gossypium raimondii] gi|763777231|gb|KJB44354.1|
            hypothetical protein B456_007G247500 [Gossypium
            raimondii]
          Length = 535

 Score =  593 bits (1529), Expect = e-166
 Identities = 316/470 (67%), Positives = 366/470 (77%), Gaps = 34/470 (7%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLWN 1427
            NRHTQS+KAF+EHV+T+S+ ST E W    + L++   D + S+E L+LLQKSMLE  W 
Sbjct: 66   NRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 1426 LSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQTTPMIQQGKRKYLGSM-- 1259
            LS  +T   ++   +   K+ V               R ++     + Q   K L S+  
Sbjct: 126  LSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQPNAKQLRSLIG 185

Query: 1258 ---LQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDEQLA 1088
               LQ +LKGYVKGV S+DLLSH+EV+ LS++IKAGLSLE+HR RLK RLGC+PSDEQLA
Sbjct: 186  PELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCEPSDEQLA 245

Query: 1087 SSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGLLRG 908
            +SL++SRAEL  + IECSLAREKLAMSNVRLVMSIAQ+YDN+GAEM+DL+QGGLIGLLRG
Sbjct: 246  TSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRG 305

Query: 907  IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEEKGI 728
            IEKFDSSKG+KISTYVYWWIRQGVSRALVENSR LRLP +LHERL LIRNAK RLEEKGI
Sbjct: 306  IEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYRLEEKGI 365

Query: 727  TPSID---------------------------RIAESLNMSQKKVRNATEAVSKVFSLDR 629
            TP+ID                           RIAESLNMSQKKVRNATEAVSKVFSLDR
Sbjct: 366  TPTIDSLLYASSQVSYSLNEPSFKYLILLYFQRIAESLNMSQKKVRNATEAVSKVFSLDR 425

Query: 628  DAFPSLSGLPGETLHSYIADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYY 449
            DAFPSL+GLPGET HSYIADN++ENNPWHGVDEW LKDEVN+LI+ TLGERER+I+RLY+
Sbjct: 426  DAFPSLNGLPGETHHSYIADNHVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYH 485

Query: 448  GLDKESLTWEDISKQIGLSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            GLDKESLTWEDISK+IGLSRERVRQVGLVALEKLKHAARKK +EAML+KH
Sbjct: 486  GLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 535


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  593 bits (1529), Expect = e-166
 Identities = 311/453 (68%), Positives = 362/453 (79%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+ P FP  NR TQ +KA +EHV+T+   STAE W   P+ +++   + + S+E L+LLQ
Sbjct: 57   NYNPSFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPPNSIEEESSELDYSVEALLLLQ 115

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALI-QTTPMIQQG 1283
            KSMLE  WNLS  +T   D+   +  KK+ V               + ++ Q   + QQ 
Sbjct: 116  KSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQN 175

Query: 1282 KRKYLGSML-----QGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K L SM+     Q  LKGYVKGV S++LL+H+EV+ LSK+IK GLSL+ H+ RLK RL
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PS EQLA+SLR+SR EL   ++ECSLAREKL MSNVRLVMSIAQ+YDN+GA+MADLV
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLV 295

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AK+RLEEKG+TPS+DRIAE LNMSQKKVRNATEA+ KVFSLDR+AFPSL+GLPGET HSY
Sbjct: 356  AKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN +ENNPWHGVD+W LKDEVNKLI  TLGERER+I+RLYYGLDKE LTWEDISK+IG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARKK +EAML+KH
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            gi|743936142|ref|XP_011012458.1| PREDICTED: RNA
            polymerase sigma factor sigA [Populus euphratica]
          Length = 509

 Score =  591 bits (1524), Expect = e-166
 Identities = 311/453 (68%), Positives = 363/453 (80%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+GP FP  NR++ S+KA +EHV+T+S  S   TW ++ D  ++     + S+E L+LLQ
Sbjct: 57   NYGPNFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQ 116

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRA-LIQTTPMIQQG 1283
            KSMLE  WNLS  +T   D+   +  KKI V               R    Q+  M Q  
Sbjct: 117  KSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSS 176

Query: 1282 KRKYLGS-----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K+L S     +LQ +LKGYVKGV S ++L H+EV+ LS+ I+AGLS E H+SRLK RL
Sbjct: 177  DFKFLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERL 236

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PSDEQ+A SLR+SRA+L  K+I+CSLAREKLAMSNVRLVMSIAQKYDN+GAEMADLV
Sbjct: 237  GCEPSDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLV 296

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSR LRLP HLHERL LIRN
Sbjct: 297  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRN 356

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AKIRLEEKG+TPSIDRIAESLNMSQ+KVRNATEA+SKVFSLDR+AFPSL+GLPGET HSY
Sbjct: 357  AKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSY 416

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN  ENNPWHGVDEW LK+EVNKLI +TL ERE++I+RLY+GLD+E LTWEDISK++G
Sbjct: 417  IADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMG 476

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARK+  EAML+KH
Sbjct: 477  LSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  591 bits (1523), Expect = e-166
 Identities = 311/453 (68%), Positives = 363/453 (80%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+GP FP  NR++ S+KA +EHV+T+S  S   TW ++ D  ++     + S+E L+LLQ
Sbjct: 57   NYGPSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQ 116

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRA-LIQTTPMIQQG 1283
            KSMLE  WNLS  +T   D+   +  KKI V               R    Q+  M Q  
Sbjct: 117  KSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSS 176

Query: 1282 KRKYLGS-----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K+L S     +LQ +LKGYVKGV S ++L H+EV+ LS+ I+AGLS E H+SRLK RL
Sbjct: 177  DFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERL 236

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PSDEQ+A SLR+SRA+L  K+I+CSLAREKLAMSNVRLVMSIAQKYDN+GAEMADLV
Sbjct: 237  GCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLV 296

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSR LRLP HLHERL LIRN
Sbjct: 297  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRN 356

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AKIRLEEKG+TPSIDRIAESLNMSQ+KVRNATEA+SKVFSLDR+AFPSL+GLPGET HSY
Sbjct: 357  AKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSY 416

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN  ENNPWHGVDEW LK+EVNKLI +TL ERE++I+RLY+GLD+E LTWEDISK++G
Sbjct: 417  IADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMG 476

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARK+  EAML+KH
Sbjct: 477  LSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA [Prunus mume]
          Length = 512

 Score =  586 bits (1511), Expect = e-164
 Identities = 309/446 (69%), Positives = 363/446 (81%), Gaps = 10/446 (2%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPSTA-ETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLW 1430
            NR  QS++A +EHV+T+S PS+A + W +  + L++   D E S+E L+LLQKSMLE  W
Sbjct: 67   NRPQQSIRALKEHVHTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKSMLEKQW 126

Query: 1429 NLSCNQTRKLDAGG--AEKKIEVIXXXXXXXXXXXXXXR--ALIQTTPMIQQGKRKYLGS 1262
            NLS  +    D+     +KKI V               +   L ++T ++     K L +
Sbjct: 127  NLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTLNKSTCVMHPSTNKPLRA 186

Query: 1261 -----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDE 1097
                 +LQ ++KGYVKGV S+DLL+H+EV+ LSK+IK GLS+E+H+SRLK RLGC+PSDE
Sbjct: 187  IVSPELLQNRVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDE 246

Query: 1096 QLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGL 917
            QLA+SLR+SRA+L  K+IEC LAREKLAMSNVRLVMSIAQ+YDN+GAEMADL+QGGLIGL
Sbjct: 247  QLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGL 306

Query: 916  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEE 737
            LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRNAKIRLEE
Sbjct: 307  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEE 366

Query: 736  KGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIADNNLE 557
            KGITPSIDRIAESLNMS+KKVRNATEA+SKVFSLDRDAFPSL+GLPGET HSYIADN LE
Sbjct: 367  KGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRLE 426

Query: 556  NNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSRERVR 377
            N PWHGVD W LK+EV+KLI+  LGERER+I++LYYGL+ E LTWEDISK+IGLSRERVR
Sbjct: 427  NIPWHGVDAWALKEEVSKLINMMLGEREREIIQLYYGLENECLTWEDISKRIGLSRERVR 486

Query: 376  QVGLVALEKLKHAARKKGLEAMLLKH 299
            QVGLVALEKLKHAARK+ +EAMLLKH
Sbjct: 487  QVGLVALEKLKHAARKREMEAMLLKH 512


>ref|XP_006878659.1| PREDICTED: RNA polymerase sigma factor sigA [Amborella trichopoda]
            gi|548832002|gb|ERM94804.1| hypothetical protein
            AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  585 bits (1507), Expect = e-164
 Identities = 309/450 (68%), Positives = 359/450 (79%), Gaps = 7/450 (1%)
 Frame = -1

Query: 1627 FGPGFPLNRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQKS 1448
            FGP  P NR TQ + A +EHVN  S+ S++ T   +PD        FESSLE LILLQKS
Sbjct: 56   FGPNSPSNRQTQYINAIKEHVNAPSSSSSSSTTEANPD--------FESSLEALILLQKS 107

Query: 1447 MLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALIQTTPMIQQGKRK 1274
            MLE  WNLS +Q         E  KK+ VI              R L Q    +   ++K
Sbjct: 108  MLEKQWNLSFDQAGTSTDLCEESCKKLGVISSGASARQRRNSLRRPLNQRAGTVLVRRKK 167

Query: 1273 YLG-----SMLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCD 1109
                     +LQG  +GYVKG+++  LLSH+EV+HLS +I+AGLSLE+H+SRLK +LG D
Sbjct: 168  QATPIVSPELLQGHFRGYVKGISNDSLLSHAEVVHLSWKIRAGLSLEEHKSRLKEKLGFD 227

Query: 1108 PSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGG 929
            PSDE LASSL++SR+ELH K+IECSLA+EKLAMSN+RLVMSIAQKYDN+G EMADL+QGG
Sbjct: 228  PSDELLASSLKISRSELHSKLIECSLAKEKLAMSNIRLVMSIAQKYDNMGIEMADLIQGG 287

Query: 928  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKI 749
            LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRA+VENSR LRLP HLHERL LIRNAKI
Sbjct: 288  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAMVENSRTLRLPTHLHERLSLIRNAKI 347

Query: 748  RLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIAD 569
            RL+E+G+TPSI RIA+SLNMS+KKV+NATEA++KVFSLDR+AFP+L+GLPGETLHSYIAD
Sbjct: 348  RLKEQGLTPSIHRIAKSLNMSKKKVKNATEAMTKVFSLDREAFPTLNGLPGETLHSYIAD 407

Query: 568  NNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSR 389
            NNL NNPWHGVDEWLLK EVNKLIS+TL ERE+DI+RLYYGLDKE  TWEDIS++IGLSR
Sbjct: 408  NNLMNNPWHGVDEWLLKAEVNKLISSTLAEREQDIIRLYYGLDKECHTWEDISRKIGLSR 467

Query: 388  ERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            ERVRQVGLVALEKLK+AAR K LEAML+KH
Sbjct: 468  ERVRQVGLVALEKLKNAARNKRLEAMLVKH 497


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  583 bits (1502), Expect = e-163
 Identities = 307/446 (68%), Positives = 360/446 (80%), Gaps = 10/446 (2%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPSTA-ETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLW 1430
            NR  QS++A +EHV T+S PS+A + W +  + L++   D E S+E L+LLQKSMLE  W
Sbjct: 67   NRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKSMLEKQW 126

Query: 1429 NLSCNQ--TRKLDAGGAEKKIEVI--XXXXXXXXXXXXXXRALIQTTPMIQQGKRKYLGS 1262
            NLS  +   R   +   +KKI V                 +   ++T ++     K L +
Sbjct: 127  NLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTNKPLRA 186

Query: 1261 -----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDE 1097
                 +LQ  +KGYVKGV S+DLL+H+EV+ LSK+IK GLS+E+H+SRLK RLGC+PSDE
Sbjct: 187  IVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDE 246

Query: 1096 QLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGL 917
            QLA+SLR+SRA+L  K+IEC LAREKLAMSNVRLVMSIAQ+YDN+GAEMADL+QGGLIGL
Sbjct: 247  QLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGL 306

Query: 916  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEE 737
            LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIRNAKIRLEE
Sbjct: 307  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEE 366

Query: 736  KGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIADNNLE 557
            KGITPSIDRIAESLNMS+KKVRNATEA+SKVFSLDRDAFPSL+GLPGET HSYIADN LE
Sbjct: 367  KGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRLE 426

Query: 556  NNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSRERVR 377
            N PWHGVD W LK+EV+KLI+  LGERE++I++LYYGL+ E LTWEDISK+IGLSRERVR
Sbjct: 427  NIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGLSRERVR 486

Query: 376  QVGLVALEKLKHAARKKGLEAMLLKH 299
            QVGLVALEKLKHAARK+ +EAMLLKH
Sbjct: 487  QVGLVALEKLKHAARKREMEAMLLKH 512


>gb|AKC88628.1| sigma factor [Francoa sonchifolia]
          Length = 508

 Score =  580 bits (1495), Expect = e-162
 Identities = 305/453 (67%), Positives = 359/453 (79%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQSVKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILLQ 1454
            N+ P FP  NR TQ +KA +EH+ T+S PS AE W +  + L+K + D E S++  +LLQ
Sbjct: 56   NYSPTFPSSNRQTQPIKALKEHLETASAPSNAEPWFQISNELEKQNSDLEYSVDAFLLLQ 115

Query: 1453 KSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRALI-QTTPMIQQG 1283
            KSMLE   +LS  Q    D+   +  KK+ V               R ++ +   M+Q  
Sbjct: 116  KSMLEKQLSLSFEQEVLTDSVKEKHSKKMSVTCSELSARQRRISGRRKILSENNGMLQAS 175

Query: 1282 KRKYLGS-----MLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRL 1118
              K L +     +LQ   KGYVKGV S ++L+H+EV+ LSK+IK+GLS+E+H+ RLK +L
Sbjct: 176  TSKQLRAIISPVLLQNHFKGYVKGVISNEVLAHAEVVRLSKKIKSGLSMEEHKLRLKGKL 235

Query: 1117 GCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLV 938
            GC+PSDEQLA+SLR+S AEL  K IE  LAREKLAMSNVRLVMSIAQ+Y+N+GAEM DLV
Sbjct: 236  GCEPSDEQLATSLRISLAELRSKWIESGLAREKLAMSNVRLVMSIAQRYNNMGAEMPDLV 295

Query: 937  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRN 758
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQG+SRA+VENSR LRLP HLHERL LIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGISRAVVENSRTLRLPTHLHERLGLIRN 355

Query: 757  AKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSY 578
            AKIRLEEKGITPS++R+AE LN+S+KKVRNATEA+SKVFSLDRDAFPSL+GLPGET HSY
Sbjct: 356  AKIRLEEKGITPSVERLAEYLNISKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSY 415

Query: 577  IADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIG 398
            IADN L+NNPWHGVDEW LKDEVNKLI  TLGERER+I+RLYYGLD E LTWEDISK+IG
Sbjct: 416  IADNCLDNNPWHGVDEWALKDEVNKLIKMTLGEREREIIRLYYGLDGECLTWEDISKRIG 475

Query: 397  LSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            LSRERVRQVGLVALEKLKHAARKK +EAML+KH
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKNMEAMLVKH 508


>ref|XP_009361126.1| PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Pyrus x
            bretschneideri]
          Length = 514

 Score =  579 bits (1493), Expect = e-162
 Identities = 310/446 (69%), Positives = 352/446 (78%), Gaps = 10/446 (2%)
 Frame = -1

Query: 1606 NRHTQSVKAFREHVNTSSTPS-TAETWHRSPDLLDKNDDDFESSLEVLILLQKSMLENLW 1430
            NR   S KA ++ VN +S PS TA+ W    + L+    D E S++ L+LLQKSMLE  W
Sbjct: 69   NRADHSSKALKDQVNAASAPSSTAQQWFHDFNDLEGESSDLEYSVDALLLLQKSMLEKQW 128

Query: 1429 NLSCNQTRKLDA---GGAEKKIEVIXXXXXXXXXXXXXXRALIQ-----TTPMIQQGKRK 1274
            NLS  +    D+       K+I V               R         T P   +  R 
Sbjct: 129  NLSFEKKIFTDSTIKTATNKRIPVTCSGVSARHRRMSNRRNAFSLNRCLTQPSTNKSLRP 188

Query: 1273 YLG-SMLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVRLGCDPSDE 1097
             +   +LQ +LKGYVKGV S+DLL+H+EV+ LSK+IK GLS+E+H+SRLK RLGC+PSDE
Sbjct: 189  VISPELLQSRLKGYVKGVLSEDLLTHTEVVRLSKKIKIGLSVEEHKSRLKERLGCEPSDE 248

Query: 1096 QLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLVQGGLIGL 917
            QLA+SLR+SRAEL  K+IECSLAREKLAMSNVRLVMSIAQKYDN+GAEMADL+QGGLIGL
Sbjct: 249  QLATSLRISRAELKSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLIQGGLIGL 308

Query: 916  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIRNAKIRLEE 737
            LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENS+ LRLP HLHERL LIRNAKIRLEE
Sbjct: 309  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSKTLRLPTHLHERLGLIRNAKIRLEE 368

Query: 736  KGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHSYIADNNLE 557
            KGITPSIDRIAESLNMS+KKVRNATEA+SKVFSLDRDAFPSL+GLPGET HSYIADN LE
Sbjct: 369  KGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRLE 428

Query: 556  NNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQIGLSRERVR 377
            N PW+GVD W LKDEVNKLI+  LGERER+I+RLYYGLD E LTWEDISK+IGLSRERVR
Sbjct: 429  NIPWNGVDAWALKDEVNKLINMMLGEREREIIRLYYGLDNECLTWEDISKRIGLSRERVR 488

Query: 376  QVGLVALEKLKHAARKKGLEAMLLKH 299
            QVGLVALEKLKHAARK  +EA+L+KH
Sbjct: 489  QVGLVALEKLKHAARKTEMEALLVKH 514


>ref|XP_008462812.1| PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo]
          Length = 509

 Score =  577 bits (1488), Expect = e-162
 Identities = 303/454 (66%), Positives = 363/454 (79%), Gaps = 10/454 (2%)
 Frame = -1

Query: 1630 NFGPGFPL-NRHTQS-VKAFREHVNTSSTPSTAETWHRSPDLLDKNDDDFESSLEVLILL 1457
            NF P +PL NRH+Q  +KA +EHV T S+P TAE W  +  + +  + D + ++E L+LL
Sbjct: 57   NFSPSYPLSNRHSQQCIKAVKEHVETPSSP-TAEPWLPNTTIWEDEETDLKCTVEALLLL 115

Query: 1456 QKSMLENLWNLSCNQTRKLDAGGAE--KKIEVIXXXXXXXXXXXXXXRAL-----IQTTP 1298
            QKSMLE  WNLS  QT   D    +  KK+ V               R +         P
Sbjct: 116  QKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP 175

Query: 1297 MIQQGKRKYLG-SMLQGQLKGYVKGVTSKDLLSHSEVIHLSKRIKAGLSLEKHRSRLKVR 1121
             I +  R  +   +LQ +LKGYVKG+ S++LLSH+EV+ LSK+IK GL+LE+H++RLK R
Sbjct: 176  KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKER 235

Query: 1120 LGCDPSDEQLASSLRMSRAELHLKMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADL 941
            LGC+PS++QLA SL++SRAEL  +M+ECSLAREKLAMSNVRLVMSIAQ+YDN+GAEMADL
Sbjct: 236  LGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 295

Query: 940  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPAHLHERLCLIR 761
            VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP HLHERL LIR
Sbjct: 296  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 355

Query: 760  NAKIRLEEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLSGLPGETLHS 581
            NAK++L+EKGITPS+DRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSL+GLPGET HS
Sbjct: 356  NAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS 415

Query: 580  YIADNNLENNPWHGVDEWLLKDEVNKLISTTLGERERDIVRLYYGLDKESLTWEDISKQI 401
            YIADN LENNPWHG D W+LK EVNKLI+ TLG+RER+I+RLY+GLD E LTWE+ISK+I
Sbjct: 416  YIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI 475

Query: 400  GLSRERVRQVGLVALEKLKHAARKKGLEAMLLKH 299
            GLSRERVRQVGLVALEKLK AA+ + +EAML+KH
Sbjct: 476  GLSRERVRQVGLVALEKLKKAAKTRKMEAMLIKH 509