BLASTX nr result

ID: Cinnamomum24_contig00010584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00010584
         (1510 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009400392.1| PREDICTED: zinc finger protein 385A-like iso...    65   1e-07
ref|XP_002309354.2| hypothetical protein POPTR_0006s19660g [Popu...    60   5e-06

>ref|XP_009400392.1| PREDICTED: zinc finger protein 385A-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 376

 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 16/168 (9%)
 Frame = -2

Query: 870 NIISGTKRKAACVEDLLQLPSPKKVHKSWSCALCEVSTTSEKGLXXXXXXXXXXXXXXXX 691
           ++IS  KRK A   +     +P+   K W CALC V+ T E  L                
Sbjct: 180 DMISEKKRKVAA--NATPNKAPRLATKDWGCALCRVTATGEMALNEHLQGKRHKAKVAAL 237

Query: 690 XXXAVEIGKKAKFTFK------------CEHCRIKCNSEPMMVAHLKGRKHAARVQELLS 547
               V+ G K K   K            CEHC +KCNS  MM  HL G+KH A ++ L  
Sbjct: 238 QA--VKTGAKMKVDGKMHQVLQKGTFLWCEHCNVKCNSHIMMTTHLSGKKHRALMKLLAK 295

Query: 546 GDE----AVPEIKKDVKSEETTADAENVEQGNMVAAETKEVVIGEGTE 415
                   +    +++K E    D   +E+ ++V  E ++  +   TE
Sbjct: 296 ASSLAGATIQTCDREIKEEAAKKDNVEIEKESIVKKEKEDDQLPNITE 343


>ref|XP_002309354.2| hypothetical protein POPTR_0006s19660g [Populus trichocarpa]
           gi|550336668|gb|EEE92877.2| hypothetical protein
           POPTR_0006s19660g [Populus trichocarpa]
          Length = 269

 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 38/93 (40%), Positives = 47/93 (50%)
 Frame = -2

Query: 675 EIGKKAKFTFKCEHCRIKCNSEPMMVAHLKGRKHAARVQELLSGDEAVPEIKKDVKSEET 496
           EI  K KF F CE C+I   SE +M AH KG+KH AR+Q+     EAV   KK   SE  
Sbjct: 144 EIKMKKKFKFWCEMCQIGAYSEMVMEAHKKGKKHLARLQKSSQNGEAVQADKKAKDSEVA 203

Query: 495 TADAENVEQGNMVAAETKEVVIGEGTEATEAPV 397
             + E+ E     A ++     G  TE TE  V
Sbjct: 204 VKETEDSEFVAERATDSGLAARGADTERTETTV 236


Top