BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00009500
         (3652 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...  1437   0.0  
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...  1434   0.0  
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...  1427   0.0  
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...  1425   0.0  
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...  1344   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1344   0.0  
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub...  1341   0.0  
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub...  1325   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1268   0.0  
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...  1257   0.0  
ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1245   0.0  
gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Ambore...  1245   0.0  
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub...  1240   0.0  
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub...  1234   0.0  
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub...  1234   0.0  
gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g...  1234   0.0  
gb|KHN22373.1| DNA-directed RNA polymerase I subunit rpa1 [Glyci...  1227   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1226   0.0  
ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I sub...  1220   0.0  
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...  1219   0.0  

>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score = 1437 bits (3719), Expect = 0.0
 Identities = 751/1174 (63%), Positives = 869/1174 (74%), Gaps = 7/1174 (0%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR AIING E HPGATHYVDK A +KLP S   R+SISRKLPSSRG VT  GK+LE E+
Sbjct: 516  KLRDAIINGAEHHPGATHYVDKLATVKLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEF 575

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GEKT+RMHY NCSTYNADFDGDE
Sbjct: 576  EGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDE 635

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVHFPQDEISRAEAFNI NANKQYVVPTSG PIRGLIQDHIISAVLLTK+DTFLTR+E+
Sbjct: 636  MNVHFPQDEISRAEAFNIVNANKQYVVPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEF 695

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
              LLY+S VS TAL   +G   +KI TI+S++E+ P+LPAIWKP+P+WTGKQVIT +LNH
Sbjct: 696  SQLLYSSGVSATALGYFVGKPGQKISTINSEEELEPVLPAIWKPEPLWTGKQVITAVLNH 755

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELY 2752
            ITRGR PF+V+K G+ P++YFGK S E +LLI KNE +HGVIDKAQFG YGLVHTVQELY
Sbjct: 756  ITRGRTPFSVRKAGKTPEEYFGKTSGEYELLIHKNELVHGVIDKAQFGGYGLVHTVQELY 815

Query: 2751 GSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKF 2572
            GS+ AG+LLSV SRLFT+FLQMHGFTCG+DDLLI   YD+ER + L+ +++IGE  H +F
Sbjct: 816  GSNAAGVLLSVLSRLFTIFLQMHGFTCGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQF 875

Query: 2571 IGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTF 2392
            +G  +   +P KLQ E E+ IR  G+SA   LDR MS A+N+LTSEVN  LFP GL K F
Sbjct: 876  VGCADGDKDPIKLQVEIEKAIRRNGDSAVTRLDRRMSGAMNKLTSEVNKNLFPEGLCKPF 935

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
            P NCLSLMT TGAKGG+VN TQI SLLGQQELEGKRVPRMVSGKTLPCF PWD  +RAGG
Sbjct: 936  PKNCLSLMTATGAKGGMVNSTQICSLLGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGG 995

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCLVK LE LKVCYD+TVRD
Sbjct: 996  FISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRD 1055

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGS+VQF YGEDG+DVHKTSF+ +F+ LA N +IV E+ +  ++   L K D YI  LP
Sbjct: 1056 ADGSVVQFIYGEDGIDVHKTSFLEEFEALAANHRIVQERFNNQLDSEVLFKYD-YIKKLP 1114

Query: 1851 DALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
             ALE KAKD+I +LSKKK  +L+                  LAQPGE VGV+AAQSVGEP
Sbjct: 1115 VALEGKAKDYIDTLSKKKLKSLNLRKRKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEP 1174

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AGRGEMNVTLGIPRLQEIL RAS KI TPVMTCPLRKG+T DDA+RLAA
Sbjct: 1175 STQMTLNTFHHAGRGEMNVTLGIPRLQEILMRASEKIQTPVMTCPLRKGKTEDDAKRLAA 1234

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL+KV VAD+IESMEV VVP+ V+  QVST+               YS ITL+DC  TLK
Sbjct: 1235 KLQKVTVADVIESMEVGVVPFSVKKHQVSTVYKLKLKLYPPELYPPYSGITLKDCQATLK 1294

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXX 1132
              FV E+ED+I  HLL LSKI  I  +     H T+              K         
Sbjct: 1295 FVFVGEMEDAIQSHLLMLSKIRGITNVV----HSTQSNSGDGADEDGPTSKSQAAEENDD 1350

Query: 1131 XXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                            AQKRKRQA DEMDYED ++NE+  TEN     E S GFESEIDQ
Sbjct: 1351 AGDDDDYEAPDDLGADAQKRKRQATDEMDYEDDMENEIVNTENGRSDIEASAGFESEIDQ 1410

Query: 951  AEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPK--AHLI 778
            AE +    + GE        Q+FDAEDE                     +   +      
Sbjct: 1411 AEVEAGNIMDGE-------IQVFDAEDEASQTPSQHGTVSKSKSSGGKDEADARGMTRRT 1463

Query: 777  KKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVI---- 610
            KK +DRA  + A GL+FEVHFRF  EPHILL QIAQK A+NVYVK SG I  CSV+    
Sbjct: 1464 KKDSDRAFFMVAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKK 1523

Query: 609  -DYEGNIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAV 433
             D E  IP LQT+GV+F  FWNM+DDLD+R++ SNDIHA+LNTYGVEAARATI+ +V  V
Sbjct: 1524 ADGEPEIPELQTSGVDFPTFWNMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQV 1583

Query: 432  FGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALH 253
            F SYGI+VNIRHL+LIAD+MT  GGYR M+R G+A T  SP  KMS+ETA+RF++EAA H
Sbjct: 1584 FKSYGIAVNIRHLSLIADFMTQTGGYRPMSRFGIAET-ISPFSKMSYETASRFVIEAAYH 1642

Query: 252  GEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            GE++ LESPSAR+ LGLP+KMGTG FD++  + +
Sbjct: 1643 GEMDNLESPSARICLGLPVKMGTGCFDLMQKINI 1676


>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
            dactylifera]
          Length = 1665

 Score = 1434 bits (3713), Expect = 0.0
 Identities = 746/1178 (63%), Positives = 871/1178 (73%), Gaps = 11/1178 (0%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLRHAIING ++HPGATHY D   + KL    N R SISRKLP+SRGV+   GK  ESE+
Sbjct: 491  KLRHAIINGADIHPGATHYKDNERMYKLQLGRNMRNSISRKLPTSRGVLVQQGKGPESEF 550

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 551  EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 610

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVH PQDEISRAEA NI NANKQYVVPTSGDPIRGLIQDHI+SAVLLTK DTFLTRE+Y
Sbjct: 611  MNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQDHIVSAVLLTKLDTFLTREQY 670

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            H LLYAS +   A  S  G F + +CT+SSDDEI PLLPAIWKP P+WTGKQVIT ILNH
Sbjct: 671  HQLLYASCMPPIA-SSQPGRFGRNVCTLSSDDEIQPLLPAIWKPIPLWTGKQVITAILNH 729

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELY 2752
            ITRGRPPFTV+  GRIP++Y GKN  E KLLI  N+ IHG++DKAQFGKYGLVHT+ ELY
Sbjct: 730  ITRGRPPFTVENKGRIPKEYLGKNHNELKLLIYNNDLIHGMVDKAQFGKYGLVHTIHELY 789

Query: 2751 GSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKF 2572
            G+DTAGILLSVFSRLFT+FLQMHGFTCGVDDLL+ +  DMERKR+LE S+ + E VH +F
Sbjct: 790  GADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSEALSEDVHIRF 849

Query: 2571 IGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTF 2392
               K+   +P KLQRE E+++    ESA   LDRMMSS++N LTSEVN  LFPSGL K F
Sbjct: 850  TAFKDGDRDPMKLQREIEKVLCRNRESATTLLDRMMSSSMNVLTSEVNQTLFPSGLQKPF 909

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPRMVSGKTLPCF PWD + RAGG
Sbjct: 910  LRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDVSCRAGG 969

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFL+GL PQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLVK LECLKV YDHTVRD
Sbjct: 970  FISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRD 1029

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGS++QF YGEDGVDV KTSFI++   LA NQ +VL++LS  +EDAHL+KS+ YI +LP
Sbjct: 1030 ADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQLEDAHLSKSNGYIKELP 1089

Query: 1851 DALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
              L   A  F   LSK  + +LH                  LA+PGE VGV+AAQSVGEP
Sbjct: 1090 YLLRENATTF-ARLSKNHQGSLHQIKRKDLMKLMKLKYLSSLAEPGEPVGVIAAQSVGEP 1148

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TPVMTCPL  GRTR+DAERLA+
Sbjct: 1149 STQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVDIRTPVMTCPLHDGRTREDAERLAS 1208

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL++VC+ADI+ESMEV  VP+ +   +VSTI               +S +TLEDC+ TL+
Sbjct: 1209 KLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLKMNLYPPELYPPHSSLTLEDCMITLR 1268

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXX 1132
              F+  +ED+I +HL  + KIS I  +  K E                   +        
Sbjct: 1269 TDFIGAMEDAIAKHLDMICKISDISSVTAKEESNLAEGTDEDEHGSKSTHGEDKDNSSGF 1328

Query: 1131 XXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                            A+KRK++A+DEM+YEDG++ E     +EH G+  S GFESEIDQ
Sbjct: 1329 DGVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKESSAKADEHDGETQS-GFESEIDQ 1387

Query: 951  AEPDDDYTLGGENE-NVDDQSQIFDAE--DETXXXXXXXXXXXXXSEDNLAKQKKPKAHL 781
             E D+DYT+GG++   V+D S   + E  +                +  LA  K+ K+  
Sbjct: 1388 VEADEDYTVGGDHSMEVEDPSLEVEEEIPESPSKAEPTPTLEDGKKQQKLADSKESKSES 1447

Query: 780  -------IKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINR 622
                    KKK +R I VDA+GLNFEVH+ FK+EP ILL ++AQKAA++VYVK S  I  
Sbjct: 1448 NKTTTKPRKKKINRTIFVDAKGLNFEVHYIFKKEPRILLAEVAQKAAKSVYVKESKNIEL 1507

Query: 621  CSVIDYEGNIP-ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNE 445
            CSV + + + P +LQTAGVNF+AFW++ED LD+ K+ SNDIHAMLNTYGVEAARATI+ E
Sbjct: 1508 CSVTEPKKDEPLSLQTAGVNFQAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKE 1567

Query: 444  VKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVE 265
            VK VF +YGI VNIRHL LIAD+MT  GGYR MNRIGM + +TSP GKM+FETAT+FIV 
Sbjct: 1568 VKGVFDAYGIRVNIRHLMLIADFMTFHGGYRPMNRIGMTDFNTSPFGKMTFETATKFIVG 1627

Query: 264  AALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            +A HGEV+ L++PSA V LG P+KMGTG FD++ NLQ+
Sbjct: 1628 SAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNLQL 1665


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score = 1427 bits (3694), Expect = 0.0
 Identities = 746/1176 (63%), Positives = 870/1176 (73%), Gaps = 10/1176 (0%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+AIING ++HPGATHY DK  + KL    N R +ISRKLP+SRGV+   GK  ESE+
Sbjct: 498  KLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAISRKLPTSRGVLVQQGKGPESEF 557

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 558  EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 617

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVH PQDEISRAEA NI NANKQY+VPTSGDPIRGLIQDHI+SAVLLTK DTFLTREEY
Sbjct: 618  MNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLTKLDTFLTREEY 677

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            H LLYAS +   A  S  G F +K+C +S DDEI PLLPAIWKP P+WTGKQVIT ILNH
Sbjct: 678  HQLLYASFMPPIA-SSQPGRFGRKVCILSLDDEIQPLLPAIWKPIPLWTGKQVITAILNH 736

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELY 2752
            IT+GRPPFTV+  GRIP++Y GK+  E KLLI KN+ IHG+IDKAQFGKYGLVHTV ELY
Sbjct: 737  ITQGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIHGMIDKAQFGKYGLVHTVHELY 796

Query: 2751 GSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKF 2572
            G+DTAGILLSVFSRLFT+FLQMHGFTCGVDDLL+ +  DMERKR+LE S+ + E VH +F
Sbjct: 797  GADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSEALSEDVHIRF 856

Query: 2571 IGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTF 2392
               K+   +P KLQ E E + R + ESA   LDRMMSS++N LTSEVN  LFPSGL K F
Sbjct: 857  TAFKDGDRDPVKLQMEIEVLCRNR-ESATTLLDRMMSSSMNVLTSEVNQTLFPSGLQKPF 915

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPRMVSGKTLPCF PWD + RAGG
Sbjct: 916  LRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDISCRAGG 975

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFLSGL PQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLVK LECLKV YDHTVRD
Sbjct: 976  FISDRFLSGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRD 1035

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGS++QF YGEDGVDV KTSFI++   LA NQ +VL++LS  +EDAHL+KS+ YI +LP
Sbjct: 1036 ADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQLEDAHLSKSNGYIKELP 1095

Query: 1851 DALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
              L   A  F   LSK  + +LH                  LA+PGE VGV+AAQSVGEP
Sbjct: 1096 YLLRENATTF-ARLSKNHQGSLHQIRRRDLMKLMKLKYMSSLAEPGEPVGVIAAQSVGEP 1154

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TPVM CPL  GRTR+DAERLA+
Sbjct: 1155 STQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRTPVMKCPLHDGRTREDAERLAS 1214

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL++VC+ADI+ESMEV  VP+ +   +VSTI               +SD+TLEDC+ TL+
Sbjct: 1215 KLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPELYPQHSDLTLEDCMTTLR 1274

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXX 1132
              F+ ++ED+I +HL  + KIS I  +  K E                   +        
Sbjct: 1275 TNFIDDMEDAIAKHLDMICKISDINSVTAKGESNLAEGTDEGEHGSKSTHGEDKDNSRGF 1334

Query: 1131 XXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                            A+KRK++A+DEM+YEDG++ E     +EH G   S GFESEIDQ
Sbjct: 1335 DDVDDDDGINEDEGMDAEKRKQRASDEMEYEDGIEKESSAKADEHDGDTQS-GFESEIDQ 1393

Query: 951  AEPDDDYTLGGE-NENVDDQSQIFD--------AEDETXXXXXXXXXXXXXSEDNLAKQK 799
             E D+DYT+GG+ +  V+D S   +        AE                S+++ ++ K
Sbjct: 1394 VEADEDYTVGGDPSMEVEDPSLEVEETPESPSKAEPTPTLEDGKKKQKLADSKESKSESK 1453

Query: 798  KPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRC 619
            K K    KKK +R I VDA+GL FEVH+ FK+EP ILL ++AQK A++VYV+ S  I  C
Sbjct: 1454 KKKTKSRKKKINRTIFVDAKGLKFEVHYIFKEEPRILLAEVAQKTAKSVYVRDSKNIELC 1513

Query: 618  SVIDYEGNIP-ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEV 442
            SV + + + P +LQTAGVNF+AFW++ED LDV K+ SNDIHAMLNTYGVE ARATI+ EV
Sbjct: 1514 SVAEPKKDEPLSLQTAGVNFQAFWDLEDHLDVNKITSNDIHAMLNTYGVEVARATIIKEV 1573

Query: 441  KAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEA 262
            K VF +YGI VNIRHLTLIAD+MT  GGYR MNRIGM N +TSP GKM+FETAT+FIV +
Sbjct: 1574 KGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGS 1633

Query: 261  ALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQ 154
            A HGEV+ L++PSA V LG P+KMGTG FD++ NLQ
Sbjct: 1634 AFHGEVDALDAPSASVCLGQPVKMGTGCFDLMQNLQ 1669


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score = 1425 bits (3689), Expect = 0.0
 Identities = 743/1177 (63%), Positives = 873/1177 (74%), Gaps = 10/1177 (0%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+AIING ++HPGATHY DK  + KL    N R +ISRKLP+S+GV+   GK  ESE+
Sbjct: 501  KLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAISRKLPTSKGVLVQQGKGPESEF 560

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 561  EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 620

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVH PQDEISRAEA NI NANKQYVVPTSGDPIRGLIQDHI+SAVLLTK DTFLTREEY
Sbjct: 621  MNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQDHIVSAVLLTKLDTFLTREEY 680

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            H LLYAS +   A  S  G F +K+CT+SSD EI PLLPAIWKP P+WTGKQVIT ILNH
Sbjct: 681  HQLLYASFMPPIA-SSQPGRFGRKVCTLSSDAEIQPLLPAIWKPIPLWTGKQVITAILNH 739

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELY 2752
            ITRGRPPFTV+  GRIP++Y GK+  E KLLI KN+ IHG++DKAQFGKYGLVHTV ELY
Sbjct: 740  ITRGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIHGMVDKAQFGKYGLVHTVHELY 799

Query: 2751 GSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKF 2572
            G+DTAGILLSVFSRLFT+FLQMHGFTCGVDDLL+ +  DMERKR+LE S+ + E VH +F
Sbjct: 800  GADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSEALSEDVHIRF 859

Query: 2571 IGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTF 2392
               K+   +P KLQRE E+ +    ESA  SLDRMMSS++N LTSEVN  LFPSGL K F
Sbjct: 860  TAFKDGDRDPVKLQREIEKTLCRNRESATASLDRMMSSSMNVLTSEVNQTLFPSGLQKPF 919

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPRMVSGKTLPCF PWD + RAGG
Sbjct: 920  LRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDISCRAGG 979

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFL+GL PQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLVK LECLKV YDHTVRD
Sbjct: 980  FISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRD 1039

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGS++QF YGEDGVDV KTSFI++   LA NQ +VL++LS  +EDAHL+KS+ Y+ +LP
Sbjct: 1040 ADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQLEDAHLSKSNGYLKELP 1099

Query: 1851 DALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
              L   A  F   LSK  + +L                   LA+PGE VGV+AAQSVGEP
Sbjct: 1100 YLLRENATTF-ARLSKNHQGSLRQIRRKDLMKLMKLKYLSSLAEPGEPVGVIAAQSVGEP 1158

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TPVM CPL  GRTR+ AE+LA+
Sbjct: 1159 STQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRTPVMKCPLHDGRTREAAEQLAS 1218

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL++VC+ADI+ESMEV  VP+ +   +VSTI               +SD+TLEDC+ TL+
Sbjct: 1219 KLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPELYPPHSDLTLEDCMTTLR 1278

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXX 1132
              F+  +ED+I +HL  + KIS I  +  K E                  ++        
Sbjct: 1279 TYFIDAMEDAIAKHLDMICKISDINSVTAKGESNLEEGTDEDEHGSKSTHREDKDNSRGF 1338

Query: 1131 XXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                            A+KRK++A+DEM+YEDG++ E     +EH G+  S GFESEIDQ
Sbjct: 1339 DDVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKENSAKADEHDGETQS-GFESEIDQ 1397

Query: 951  AEPDDDYTLGGE-NENVDDQSQIFD--------AEDETXXXXXXXXXXXXXSEDNLAKQK 799
             E D+DYT+GG+ +  V+D S   +        AE                ++++ ++ K
Sbjct: 1398 VEADEDYTVGGDPSMEVEDPSLEAEETPESPSKAEPTPTLEDGKKKQKLADNKESKSESK 1457

Query: 798  KPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRC 619
            K      KKK +R I VDA+GL FEVH+ FK+EP ILL ++AQKAA++VYVK S  I  C
Sbjct: 1458 KKTTKPRKKKINRTIFVDAKGLTFEVHYIFKKEPRILLAEVAQKAAKSVYVKESKNIELC 1517

Query: 618  SVIDYEGNIP-ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEV 442
            SV + + + P +LQTAGVNF+AFW++ED LD+ K+ SNDIHAMLNTYGVEAARATI+ EV
Sbjct: 1518 SVPEPKKDEPLSLQTAGVNFQAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEV 1577

Query: 441  KAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEA 262
            K VF +YGI VNIRHLTLIAD+MT  GGYR MNRIGM N +TSP GKM+FETAT+FIV +
Sbjct: 1578 KGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGS 1637

Query: 261  ALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            A HGEV+ L++PSA V LG P+KMGTG FD++ NLQ+
Sbjct: 1638 AFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNLQL 1674


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score = 1344 bits (3479), Expect = 0.0
 Identities = 726/1214 (59%), Positives = 848/1214 (69%), Gaps = 47/1214 (3%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR AIING E+HPGATHYVDK + +KL  +   RISISRKLPSSRGVV   G+S ++E+
Sbjct: 506  KLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEF 565

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 566  EGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 625

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVHFPQDEISRAEA+NI NAN QY+VP+ GDPIRGLIQDHI+SAVLLTKKDTFLTRE+Y
Sbjct: 626  MNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQY 685

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S +S +   S IG   KK+  + S+DE+ PLLPAIWKP+P+W+GKQVIT +LNH
Sbjct: 686  NQLLYSSGLS-SGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNH 744

Query: 2931 ITRGRPPFTVKKDGRIPQDYFG-------------------------KNSRENKLLIQKN 2827
            ITRGR PFT +KDG+IP++YFG                         K   E KLLI KN
Sbjct: 745  ITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKN 804

Query: 2826 EFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIA 2647
            E + GVIDKAQF KYGLVH VQELYGS+TAGILLSV SRLFTVFLQMHGFTCGVDDLLI+
Sbjct: 805  ELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIS 864

Query: 2646 KHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRM 2467
             +YD+ RK  L+ S+ IGE VH KFIGS +  ++P KLQ E E+II + GE+A   LDRM
Sbjct: 865  PNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRM 924

Query: 2466 MSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGK 2287
            M + LN LTS+VN  L   GL+K FP NCLSLMTTTGAKG  VNF+QISS LGQQ+LEGK
Sbjct: 925  MKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGK 984

Query: 2286 RVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSR 2107
            RVPRMVSGKTLPCF PWD  ARAGGFI+DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSR
Sbjct: 985  RVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSR 1044

Query: 2106 SGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKI 1927
            SGYLQRCL+K LECLKVCYD+TVRD+DGSIVQF YG+DGVDVH+TSFIT+F+ LA N+++
Sbjct: 1045 SGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEV 1104

Query: 1926 VLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXX 1747
            V EK           K + YI  LP  L  K K FI    ++++D  +            
Sbjct: 1105 VCEKFGQD------GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVK 1158

Query: 1746 XXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASY 1567
                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGRGE+NVTLGIPRLQEIL  A+ 
Sbjct: 1159 QKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAN 1218

Query: 1566 KILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXX 1387
             I TP+MTCPL+ GR++DDAERLAAKLKKV VADI ESMEVS+VP+ VQ+ Q  +I    
Sbjct: 1219 DIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLK 1278

Query: 1386 XXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVT 1207
                       ++ I+LEDC  TL+  FVRELED+I  HLL LSKIS IK     S  + 
Sbjct: 1279 MKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMA 1338

Query: 1206 RXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLD 1027
                                                     AQKRK+QA+DEMDY D   
Sbjct: 1339 SKETDEDASGDGLAGGN-----GDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD--- 1390

Query: 1026 NEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXX 847
                 +E E    E S G   EID  E + + +    NE V     I D +DE       
Sbjct: 1391 -----SEGEPDEGEPSAGLTEEIDLVEDEVEIS---NNEEVG----ISDPKDEDSKVPSK 1438

Query: 846  XXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQK 667
                        AK+KK +   IKK  DRAILV A+G  FEVHFRF  EPHILL QIAQK
Sbjct: 1439 SKSSKNKKAKTEAKRKK-RFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQK 1497

Query: 666  AAENVYVKSSGKINRCSVID-------YEG---------------NIPALQTAGVNFEAF 553
            AA  VY++SSGKI+ C VID       Y G                +PALQTAGV+F AF
Sbjct: 1498 AANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQTAGVDFTAF 1557

Query: 552  WNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYM 373
            W M+D+LDVR V SN++HAMLNT+GVEAARATI+ EV  VF +YG+ VNIRHL+LIAD+M
Sbjct: 1558 WKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFM 1617

Query: 372  TSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIK 193
            T +GGYR MNR G    S SP  KM+FETA++FIVEAA HG  + LES SAR+ LGLP+K
Sbjct: 1618 THSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVK 1677

Query: 192  MGTGAFDVLHNLQV 151
            MGTG FD++  +++
Sbjct: 1678 MGTGCFDLMQKIEI 1691


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1344 bits (3479), Expect = 0.0
 Identities = 726/1214 (59%), Positives = 848/1214 (69%), Gaps = 47/1214 (3%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR AIING E+HPGATHYVDK + +KL  +   RISISRKLPSSRGVV   G+S ++E+
Sbjct: 484  KLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEF 543

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 544  EGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 603

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVHFPQDEISRAEA+NI NAN QY+VP+ GDPIRGLIQDHI+SAVLLTKKDTFLTRE+Y
Sbjct: 604  MNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQY 663

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S +S +   S IG   KK+  + S+DE+ PLLPAIWKP+P+W+GKQVIT +LNH
Sbjct: 664  NQLLYSSGLS-SGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNH 722

Query: 2931 ITRGRPPFTVKKDGRIPQDYFG-------------------------KNSRENKLLIQKN 2827
            ITRGR PFT +KDG+IP++YFG                         K   E KLLI KN
Sbjct: 723  ITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKN 782

Query: 2826 EFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIA 2647
            E + GVIDKAQF KYGLVH VQELYGS+TAGILLSV SRLFTVFLQMHGFTCGVDDLLI+
Sbjct: 783  ELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIS 842

Query: 2646 KHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRM 2467
             +YD+ RK  L+ S+ IGE VH KFIGS +  ++P KLQ E E+II + GE+A   LDRM
Sbjct: 843  PNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRM 902

Query: 2466 MSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGK 2287
            M + LN LTS+VN  L   GL+K FP NCLSLMTTTGAKG  VNF+QISS LGQQ+LEGK
Sbjct: 903  MKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGK 962

Query: 2286 RVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSR 2107
            RVPRMVSGKTLPCF PWD  ARAGGFI+DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSR
Sbjct: 963  RVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSR 1022

Query: 2106 SGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKI 1927
            SGYLQRCL+K LECLKVCYD+TVRD+DGSIVQF YG+DGVDVH+TSFIT+F+ LA N+++
Sbjct: 1023 SGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEV 1082

Query: 1926 VLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXX 1747
            V EK           K + YI  LP  L  K K FI    ++++D  +            
Sbjct: 1083 VCEKFGQD------GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVK 1136

Query: 1746 XXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASY 1567
                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGRGE+NVTLGIPRLQEIL  A+ 
Sbjct: 1137 QKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAN 1196

Query: 1566 KILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXX 1387
             I TP+MTCPL+ GR++DDAERLAAKLKKV VADI ESMEVS+VP+ VQ+ Q  +I    
Sbjct: 1197 DIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLK 1256

Query: 1386 XXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVT 1207
                       ++ I+LEDC  TL+  FVRELED+I  HLL LSKIS IK     S  + 
Sbjct: 1257 MKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMA 1316

Query: 1206 RXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLD 1027
                                                     AQKRK+QA+DEMDY D   
Sbjct: 1317 SKETDEDASGDGLAGGN-----GDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD--- 1368

Query: 1026 NEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXX 847
                 +E E    E S G   EID  E + + +    NE V     I D +DE       
Sbjct: 1369 -----SEGEPDEGEPSAGLTEEIDLVEDEVEIS---NNEEVG----ISDPKDEDSKVPSK 1416

Query: 846  XXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQK 667
                        AK+KK +   IKK  DRAILV A+G  FEVHFRF  EPHILL QIAQK
Sbjct: 1417 SKSSKNKKAKTEAKRKK-RFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQK 1475

Query: 666  AAENVYVKSSGKINRCSVID-------YEG---------------NIPALQTAGVNFEAF 553
            AA  VY++SSGKI+ C VID       Y G                +PALQTAGV+F AF
Sbjct: 1476 AANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQTAGVDFTAF 1535

Query: 552  WNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYM 373
            W M+D+LDVR V SN++HAMLNT+GVEAARATI+ EV  VF +YG+ VNIRHL+LIAD+M
Sbjct: 1536 WKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFM 1595

Query: 372  TSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIK 193
            T +GGYR MNR G    S SP  KM+FETA++FIVEAA HG  + LES SAR+ LGLP+K
Sbjct: 1596 THSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVK 1655

Query: 192  MGTGAFDVLHNLQV 151
            MGTG FD++  +++
Sbjct: 1656 MGTGCFDLMQKIEI 1669


>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1640

 Score = 1341 bits (3471), Expect = 0.0
 Identities = 701/1175 (59%), Positives = 843/1175 (71%), Gaps = 8/1175 (0%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR AIING  +HPGATHY DK  + KL  S   R +ISRKLP+SRG+    G   ESE+
Sbjct: 479  KLRCAIINGANIHPGATHYKDKERMYKLQASQTMRSAISRKLPTSRGMTAQLGMGPESEF 538

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 539  EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 598

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVH PQDEISRAEA NI NANKQY+VPTSG PIRGLIQDHI+SAVLLTK DTFLTREEY
Sbjct: 599  MNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQDHIVSAVLLTKMDTFLTREEY 658

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            H LLYAS V  T+     G F +K+    SD EI PL PAIWKP P+WTGKQVIT ILN 
Sbjct: 659  HQLLYASCVPPTSYSQRNG-FGQKVSVSWSDYEIQPLPPAIWKPTPLWTGKQVITAILNF 717

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELY 2752
            +TRG  P T++K GRI ++Y G++     L I  N+ +HG+IDKAQFG YGLVH V ELY
Sbjct: 718  VTRGHLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNDLVHGMIDKAQFGTYGLVHAVHELY 777

Query: 2751 GSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKF 2572
            G D AG+LLSVFSRLFT FLQMHGFTCGVDDLL+++  DMERK++LE S+   E VH +F
Sbjct: 778  GPDVAGMLLSVFSRLFTSFLQMHGFTCGVDDLLLSQKSDMERKKILEKSETQAEEVHMRF 837

Query: 2571 IGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTF 2392
              +K+   +P +LQRE E+++R  G+SA   LDRMMS++LN LTSE+N  LFP+GL K F
Sbjct: 838  TRTKDGDGDPMELQREIEKVLRGNGDSATALLDRMMSNSLNSLTSEINQTLFPNGLSKPF 897

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPRMVSGKTLPCF PWD ++R+GG
Sbjct: 898  LKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDISSRSGG 957

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFL+GL PQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCL+K LECLKV YDHTVRD
Sbjct: 958  FISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLECLKVSYDHTVRD 1017

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGS+VQF YGEDGVDV KTS+I++FKML+ N+ +VL+K S  + D  LAKS++YI +LP
Sbjct: 1018 ADGSVVQFIYGEDGVDVLKTSYISEFKMLSDNRNVVLQKFSDQIVDTSLAKSNAYIRELP 1077

Query: 1851 DALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
             +L   A DF+    KK++ + H                  LA+PGEAVGV+AAQSVGEP
Sbjct: 1078 CSLRDNATDFV---LKKQKSSPHQINKKDFMKLMKLKYLSSLAEPGEAVGVVAAQSVGEP 1134

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AG+G+MNVTLGIPRLQEIL  AS  I TP+M CPL   +T+DDAERLAA
Sbjct: 1135 STQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMNCPLHAWKTKDDAERLAA 1194

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL++V VAD++E MEV  VP+ +   Q+STI               +S++TLEDC   L+
Sbjct: 1195 KLRRVSVADVVERMEVCTVPFSIHRNQISTIYKLKMTLYPSELYPSFSELTLEDCREVLE 1254

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXX 1132
            + FV  +ED+I +H+ T+SKIS IK+++ K E+                 +         
Sbjct: 1255 MTFVEAMEDAIAKHVDTISKISDIKVVSGKEEN------DFEEGVDEDESRNKSSMEENA 1308

Query: 1131 XXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                             ++RK+QA DE++Y+DG++ E FV   EH  +E   GFESEID 
Sbjct: 1309 DGGDEDDESGDDQGIDYKRRKQQANDEVEYDDGIEKESFVAAGEH-DEETQSGFESEIDH 1367

Query: 951  AEPDDDYTLGGENENVD------DQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPK 790
             E D+DY +GG +  VD      +     D+   +              ++  +K KKPK
Sbjct: 1368 LEADEDYLMGGGSPGVDMDLATPESPSKADSTPISEDDKKKSKSVEKGKKETKSKAKKPK 1427

Query: 789  AHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVI 610
                KKK  R I V A GL FEVH+ F+ EP ILL +IAQ+ A+ VYVK    I RCS+ 
Sbjct: 1428 RS--KKKIRRTIYVMAEGLKFEVHYIFRSEPRILLAEIAQRTAKRVYVKEYKNIERCSLK 1485

Query: 609  DYEGNIP--ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKA 436
            + + +     LQ AGVNF+  W++E+ LD+  + SNDIHAMLNTYGVEAARATI+ EV  
Sbjct: 1486 ENKKSTDPFMLQIAGVNFKTLWDLEEYLDINHIYSNDIHAMLNTYGVEAARATIIQEVTD 1545

Query: 435  VFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAAL 256
            VFG YGI VNIRHL+LIAD+MT  GGYR MNR+GM + +TSP GKM+FETAT+FIVE+A 
Sbjct: 1546 VFGLYGIQVNIRHLSLIADFMTFHGGYRPMNRVGMGDFNTSPFGKMTFETATKFIVESAF 1605

Query: 255  HGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            HGEV+ LESPSA V+LG P+KMGTG FD++ NLQ+
Sbjct: 1606 HGEVDTLESPSASVSLGQPVKMGTGCFDLMQNLQL 1640


>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1641

 Score = 1325 bits (3430), Expect = 0.0
 Identities = 697/1181 (59%), Positives = 837/1181 (70%), Gaps = 14/1181 (1%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR AIING ++HPGATHY DK  + KL  S N R +ISRKLP+SRG+    G   ESE+
Sbjct: 475  KLRCAIINGADIHPGATHYKDKERMYKLQASQNMRSAISRKLPTSRGMTAQLGTGPESEF 534

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 535  EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 594

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVH PQDEISRAEA NI NANKQY+VPTSG PIRGLIQDHI+SAVLLTK DTFLTREEY
Sbjct: 595  MNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQDHIVSAVLLTKMDTFLTREEY 654

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            H LLYAS V  T+  S    F +K+    SD EI PL PAIWKP P+WTGKQVIT ILN 
Sbjct: 655  HQLLYASSVPPTSY-SQRNRFGQKVSVSWSDYEIQPLPPAIWKPTPLWTGKQVITAILNF 713

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELY 2752
            +TRGR P T++K GRI ++Y G++     L I  NE +HG+IDKAQFG YGLVH V ELY
Sbjct: 714  VTRGRLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNELVHGMIDKAQFGTYGLVHAVHELY 773

Query: 2751 GSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKF 2572
            G D AG LLSVFSRLFT FLQ+HGFTCGVDDLL+++  D+ER+R+L+ S+     VH +F
Sbjct: 774  GPDVAGTLLSVFSRLFTSFLQIHGFTCGVDDLLLSQKSDIERERILKKSEIQSGEVHMRF 833

Query: 2571 IGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTF 2392
              +K+   +P KLQRE E+++R  G+SA   LDRMMS++LN LTSE+N  LFP+GLLK F
Sbjct: 834  TRTKDGDGDPMKLQREIEKVLRGNGDSATALLDRMMSNSLNSLTSEINQTLFPNGLLKPF 893

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPRMVSGKTLPCF PWD ++RAGG
Sbjct: 894  LKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDISSRAGG 953

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFL+GL PQEYYFHCMAGRDGLVDTAIKTSRSGYLQRC++K LECLKV YDHTVRD
Sbjct: 954  FISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCIIKNLECLKVSYDHTVRD 1013

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGS++QF YGEDG+DV K S I++FKML  NQK+VL+K S  + D  LAKS++YI +LP
Sbjct: 1014 ADGSVIQFIYGEDGIDVLKASHISEFKMLLDNQKVVLQKFSDQISDTSLAKSNAYIRELP 1073

Query: 1851 DALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
             +L  KA DFI    K ++   H                  LA+PGEAVGV+AAQSVGEP
Sbjct: 1074 CSLRDKATDFI---LKNQKSFPHQINQKDFMKLMKLKYLSSLAEPGEAVGVVAAQSVGEP 1130

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AG+G+MNVTLGIPRLQEIL  AS  I TP+M CPL   +T+DDAERLAA
Sbjct: 1131 STQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMNCPLHVWKTKDDAERLAA 1190

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL++V +AD++E MEV  VP+ +   Q+STI               +S++TLEDC   L+
Sbjct: 1191 KLRRVSLADVVERMEVCTVPFSIHGNQISTIYKLKMTLYPSELYPAFSELTLEDCKEVLE 1250

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXX 1132
              FV  +ED+I +HL  + +IS IK+ + K ++                  +        
Sbjct: 1251 TTFVEAMEDAIAKHLDMIFRISDIKVASGKEDN-----DFEEGVDEDESRNKSNTVEENV 1305

Query: 1131 XXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                            +++RK+QA DE++Y+DG++ E FV   EH  +E   GFESEID 
Sbjct: 1306 DGGDEDYESLDDQGTDSRRRKQQANDEVEYDDGIEKESFVAAGEH-DEEMQSGFESEIDH 1364

Query: 951  AEPDDDYTLGGENENVD------------DQSQIFDAEDETXXXXXXXXXXXXXSEDNLA 808
             E D+DY +GG +   D            D + +  +ED                     
Sbjct: 1365 VEADEDYLMGGGSPGFDMDIATPESPSKADSTPV--SEDGKKKSKLTEKGKKETKSKADK 1422

Query: 807  KQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKI 628
            K KKPK+   KKK  R I + A GL FEVH+ F+ EP ILL +IAQ+ A+ VYVK    I
Sbjct: 1423 KAKKPKSS--KKKIRRTIYMMAEGLKFEVHYIFRSEPRILLAEIAQRTAKRVYVKEYKNI 1480

Query: 627  NRCSVIDYEGNIP--ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATI 454
             RCS+ + + +     LQ AGVNF   W++E+ LD+  + SNDIHAMLNTYGVEAARATI
Sbjct: 1481 ERCSLKENKKSTDPFMLQIAGVNFSTLWDLEEFLDIIHIYSNDIHAMLNTYGVEAARATI 1540

Query: 453  LNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRF 274
            + EV  VFG YGI VNIRHL+LIAD+MT  GGYR MNR+GM + +TSP GKM+FETAT+F
Sbjct: 1541 IKEVTDVFGLYGIQVNIRHLSLIADFMTFHGGYRPMNRVGMGDFNTSPFGKMTFETATKF 1600

Query: 273  IVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            I+E+A HGEV+ LESPSA V+LG P+KMGTG FD++ NLQ+
Sbjct: 1601 IIESAFHGEVDTLESPSASVSLGQPVKMGTGCFDLMQNLQL 1641


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1268 bits (3281), Expect = 0.0
 Identities = 691/1226 (56%), Positives = 831/1226 (67%), Gaps = 59/1226 (4%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+A+ING+E HPGATHYVDK ++ KLP +  +RISISRKLPSSRG VT  GK  E E+
Sbjct: 483  KLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQAGKGSECEF 542

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCS-TYNADFDGD 3295
            EGK+VYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCS TYNADFDGD
Sbjct: 543  EGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSITYNADFDGD 602

Query: 3294 EMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREE 3115
            EMNVHFPQDE+SRAEA+NI NAN Q+V P++G+P+RGLIQDHI+SAVLLTKKDTFL+++E
Sbjct: 603  EMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLLTKKDTFLSQDE 662

Query: 3114 YHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILN 2935
            ++ LLY+S VS     S  G   +K+    S+DEI  L PAIWKPKP+WTGKQVIT ILN
Sbjct: 663  FNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPKPLWTGKQVITAILN 722

Query: 2934 HITRGRPPFTVKKDGRIPQDYFGKNSRENK---------------------LLIQKNEFI 2818
            HIT   PPFTV+KD +IP ++F   + E+K                     +L+ KNE +
Sbjct: 723  HITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKEPDEEKMLVYKNELV 782

Query: 2817 HGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHY 2638
             GVIDK QFG+YGLVHTV EL GS TAGILLSV SRLFT +LQMHGFTCGVDDLLI  + 
Sbjct: 783  RGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHGFTCGVDDLLILTNK 842

Query: 2637 DMERKRMLESSDKIGEHVHAKFIGSKNDHV--EPGKLQRETERIIRTKGESAAMSLDRMM 2464
            D ERK+ LE  +K GE VH  FIG K++ +  +P  +Q   E+ IR+ G+SA   LDR M
Sbjct: 843  DEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDGDSALAYLDRQM 902

Query: 2463 SSALNRLTSE-VNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGK 2287
            S+ LN  TS  V + L   GLLK    NC+SLMTT+GAKG  VNF QISS LGQQELEGK
Sbjct: 903  SNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGK 962

Query: 2286 RVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSR 2107
            RVPRMVSGKTLPCFHPWD  AR+GG+I DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSR
Sbjct: 963  RVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSR 1022

Query: 2106 SGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKI 1927
            SGYLQRCL+K LECLK+ YDHTVRDADGS+VQF YGEDGVDVH+TSFI +FK LA NQ +
Sbjct: 1023 SGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDM 1082

Query: 1926 VLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXX 1747
            + ++  G      L   +SYI++LP+AL+ KA  F+   S   R   +            
Sbjct: 1083 IYKRSGG-----QLGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKREDLYNLMK 1137

Query: 1746 XXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASY 1567
                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS 
Sbjct: 1138 QKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASI 1197

Query: 1566 KILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXX 1387
             I TP+MTCPL++GRT +DA+ LA KL+KV VADI+ESMEVSVVP+ +Q+  V  I    
Sbjct: 1198 DIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLK 1257

Query: 1386 XXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVT 1207
                       Y++I++ED   TL+V F+RELED+I  H+  LS+IS IK    +S    
Sbjct: 1258 MKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRA 1317

Query: 1206 RXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLD 1027
                           ++                        AQKRK QA DEMDY+DG +
Sbjct: 1318 SGEADEDVAGDMSHREE-----RDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFE 1372

Query: 1026 NEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAE-DET----- 865
             E+   E E    E   GFESEIDQ          G+NE       + D E  ET     
Sbjct: 1373 EEL--NEGESTASEEESGFESEIDQ----------GDNETEISNDVMLDNEASETLPLRK 1420

Query: 864  ---XXXXXXXXXXXXXSEDNLAKQKKPKA---HLIKKKTDRAILVDARGLNFEVHFRFKQ 703
                             E +  K+KKPKA     I K  DRAI V+AR ++FEVHF+F  
Sbjct: 1421 PSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTN 1480

Query: 702  EPHILLTQIAQKAAENVYVKSSGKINRCSVID-------YEG---------------NIP 589
            EPHILL +IAQK A+ VY+++ GKI +C V D       Y G                +P
Sbjct: 1481 EPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLKPDVKEKVP 1540

Query: 588  ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISV 409
            AL   GV+F  FW M+D LDVR + SN+IHAML TYGVEAAR TI+ E+  VF SYGI+V
Sbjct: 1541 ALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAV 1600

Query: 408  NIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLES 229
            + RHL+LIAD+MT  GGYR M+R+G    S SP  KMSFETA++FIVEAALHGE++ LE+
Sbjct: 1601 SNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLET 1660

Query: 228  PSARVALGLPIKMGTGAFDVLHNLQV 151
            PSAR+ LGLP+KMGTG+FD++  L++
Sbjct: 1661 PSARICLGLPVKMGTGSFDLMQKLEI 1686


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score = 1257 bits (3252), Expect = 0.0
 Identities = 686/1225 (56%), Positives = 831/1225 (67%), Gaps = 58/1225 (4%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR AIING+E+HPGATHYVDK +  +LP +  +RISISRKLPSSR  +T  GK+ + E+
Sbjct: 490  KLREAIINGSELHPGATHYVDKLSTQRLPPNRKARISISRKLPSSRAAITQPGKNFDYEF 549

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GEKT+RMHY NCSTYNADFDGDE
Sbjct: 550  EGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDE 609

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            +NVHFPQDEISRAEA+NI NAN QYV P++G+P+R LIQDHI+SAVLLTK+DTFL+R+E+
Sbjct: 610  INVHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALIQDHIVSAVLLTKRDTFLSRDEF 669

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S VS  A    +G   +K+   SS++ + P+LPAI KPKP+WTGKQVIT +LNH
Sbjct: 670  NQLLYSSGVSGLAQHHRLGKSGQKVLISSSEEGMLPILPAILKPKPLWTGKQVITAVLNH 729

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSREN-----------------------KLLIQKNEF 2821
            ITRGRPPFTV+K G+ P+D+F   S EN                       K+LI KN+ 
Sbjct: 730  ITRGRPPFTVEKTGKTPRDFFKNRSNENKPKSVGQEGKDAEENSNKEPDEEKILIYKNDL 789

Query: 2820 IHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKH 2641
            + GVIDKAQF  YGLVHTVQELYGS+TAG LLSVFSRLFTVFLQMHGFTCGVDDLLI   
Sbjct: 790  VRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFSRLFTVFLQMHGFTCGVDDLLIMND 849

Query: 2640 YDMERKRMLESSDKIGEHVHAKFIGSKND-HVEPGKLQRETERIIRTKGESAAMSLDRMM 2464
             D+ERK+ LE  +K     H +F   K D  + P +LQ + E+ IR  GE+A  +LDR M
Sbjct: 850  KDIERKKQLEECEKKVTEAHYEFCAVKVDTEIAPIELQLKIEKTIRRDGEAALTALDRTM 909

Query: 2463 SSALNRLTSE-VNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGK 2287
             S LN+ +S+ V  +L   GL+K    NC+SLMTTTGAKG  VNF QISS LGQQELEGK
Sbjct: 910  ISVLNKNSSQGVLTELLSEGLVKPMGRNCISLMTTTGAKGSKVNFQQISSFLGQQELEGK 969

Query: 2286 RVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSR 2107
            RVPRMVSGKTLPCFHPWD  ARAGGFI+DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSR
Sbjct: 970  RVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSR 1029

Query: 2106 SGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKI 1927
            SGYLQRCL+K LECLK+ YDHTVRDADGSIVQF YGEDG+DVH+TSF+T+F+ LA N  +
Sbjct: 1030 SGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYGEDGIDVHQTSFVTKFEALALNCDV 1089

Query: 1926 VLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXX 1747
            + EKLS  + + +    DS    LPD L  KA  FI    ++K  T +            
Sbjct: 1090 MSEKLSSMLGEPY----DSG-KILPDDLRDKAVQFIKDNRQQKIKTKN------FLKLLK 1138

Query: 1746 XXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASY 1567
                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS 
Sbjct: 1139 LKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASI 1198

Query: 1566 KILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXX 1387
             I TPVMTCPL KG+T++DA RLA K+KK+ VA+I+ESM VSV P+ + N  + +I    
Sbjct: 1199 DIKTPVMTCPLHKGKTKEDALRLADKMKKITVAEILESMGVSVTPFAIHNGDICSIYKLK 1258

Query: 1386 XXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVT 1207
                        SDIT+ DC   L+V F+RELED+I  HL+ LS+IS IK     S    
Sbjct: 1259 MRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNHLVLLSRISGIKNFMPDSR--- 1315

Query: 1206 RXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLD 1027
                            +                        AQK+K+QA DEMDYEDG  
Sbjct: 1316 ----PNASSETDEDVPESRSHETENDDDTDDEGRAEDLGLDAQKQKQQATDEMDYEDG-- 1369

Query: 1026 NEMFVTENEHGGKEHSLGFESEIDQAEPD----DDYTLGGENE---------NVDDQSQI 886
                 +E E        G ESE D +E +    ++  +G +NE         N +D S++
Sbjct: 1370 -----SEEEQNEGASLAGLESENDMSEDENGTIENNVIGSDNEKDDIFHGSPNAEDGSKL 1424

Query: 885  FDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFK 706
               E  T                   K+KK +   I+K+TDRAI    +GL FEVHF+F 
Sbjct: 1425 KSREGNTRAE---------------PKRKKMRGKFIRKETDRAIFSATKGLVFEVHFKFV 1469

Query: 705  QEPHILLTQIAQKAAENVYVKSSGKINRCSVID-------YEG-------------NIPA 586
             EPHILL QIA+K A+ VY++S GKI++C V D       Y G             NIPA
Sbjct: 1470 NEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSGKANIPA 1529

Query: 585  LQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVN 406
            L TAGV+F AFW ME  LDVR + SN+IHAMLNTYGVEAAR TI++E+  VF SYGI VN
Sbjct: 1530 LHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNVFTSYGIGVN 1589

Query: 405  IRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESP 226
            IRHLTLIAD+MT +G YR M+R+G      SP  KMSFETA++FIV+AA HG V+ LE+P
Sbjct: 1590 IRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKHGLVDNLETP 1649

Query: 225  SARVALGLPIKMGTGAFDVLHNLQV 151
            S+R+ LGLP+KMGTG+F ++ N+++
Sbjct: 1650 SSRICLGLPVKMGTGSFGLMQNVEI 1674


>ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            rpa1 [Amborella trichopoda]
          Length = 1605

 Score = 1245 bits (3222), Expect = 0.0
 Identities = 682/1198 (56%), Positives = 838/1198 (69%), Gaps = 31/1198 (2%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNS--------RISISRKLPSSRGVVTHH 3496
            +LR A++NG E+HPGAT Y D+     L  ++N         R SI++KL S+ G V+  
Sbjct: 416  RLRQAVLNGPEIHPGATLYHDEQGNTNLADNLNDSKYKNENRRNSIAKKLLSTPGAVSTD 475

Query: 3495 --GKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCS 3322
              GK   S +EGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHV R+L GEKTLRMHY NCS
Sbjct: 476  VSGKGFNSNFEGKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVARILKGEKTLRMHYANCS 535

Query: 3321 TYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTK 3142
            +YNADFDGDEMNVHFPQDEI+RAEA+NI NAN+QY+VPTSG+PIRGLIQDHI+SAVLLTK
Sbjct: 536  SYNADFDGDEMNVHFPQDEIARAEAYNIVNANEQYIVPTSGEPIRGLIQDHIVSAVLLTK 595

Query: 3141 KDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTG 2962
            KDTFLT+EEYHHLLY++ VS  A     GN +KKI  + SD+EI PLLPAIWKPKP+WTG
Sbjct: 596  KDTFLTQEEYHHLLYSACVSTVAPDFKHGNLSKKISLVKSDEEIRPLLPAIWKPKPLWTG 655

Query: 2961 KQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKY 2782
            KQVI+TIL+H+TRG+PPFTVK+ GRIP  YFGK + E K+L+ KNE +HGVIDKAQFGK+
Sbjct: 656  KQVISTILDHVTRGQPPFTVKRAGRIPAGYFGKKNGEYKVLVHKNELVHGVIDKAQFGKF 715

Query: 2781 GLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSD 2602
            GLVH V ELYG+  AG L SVF+RLFT +LQMHGFTCGVDDLL+ +  +M+R+R L+ S+
Sbjct: 716  GLVHAVHELYGASAAGRLFSVFTRLFTAYLQMHGFTCGVDDLLVRQCAEMDRRRKLDESE 775

Query: 2601 KIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNK 2422
             IG+HVH+ FIG+K+  ++P ++Q   E+++R KGESA   LDRMMSSALNRLTSEVNN 
Sbjct: 776  TIGDHVHSWFIGAKDAEMDPIRMQAAIEKLVRGKGESAIARLDRMMSSALNRLTSEVNNS 835

Query: 2421 LFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFH 2242
            LFP GL K+FPSNCLSLMT++GAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCF 
Sbjct: 836  LFPEGLSKSFPSNCLSLMTSSGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFL 895

Query: 2241 PWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECL 2062
            PWDS ARAGGFI+DRFL+GL PQEYYFHCMAGR+GLVDTAIKT+RSGYLQR L+K LECL
Sbjct: 896  PWDSAARAGGFISDRFLNGLRPQEYYFHCMAGREGLVDTAIKTARSGYLQRRLMKNLECL 955

Query: 2061 KVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGH-VEDAHL 1885
            +V YDHTVRD+DGSI++F YGEDGVDV KTS++T+FK LA N+K +  +L  H +EDA  
Sbjct: 956  RVNYDHTVRDSDGSIIEFIYGEDGVDVVKTSWLTEFKFLAANKKTLSARLGVHQLEDALP 1015

Query: 1884 AKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAV 1705
            ++ DSYI DLPDALE K   FI  LSKKKRD+LH                  LAQPGEAV
Sbjct: 1016 SEYDSYIKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQPGEAV 1075

Query: 1704 GVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKG 1525
            GV+AAQS+GEPSTQMTLNTFHFAG+GEMNVTLGIPRLQEIL  A+  I TPVMTCPL K 
Sbjct: 1076 GVIAAQSIGEPSTQMTLNTFHFAGQGEMNVTLGIPRLQEIL-GAAKDIRTPVMTCPLLKQ 1134

Query: 1524 RTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSD 1345
            RTRDDAERLAAKL ++  AD+IESM+V VVP+ V+N +  T+               +SD
Sbjct: 1135 RTRDDAERLAAKLSRIKFADVIESMQVHVVPFSVKNGEACTVYKLRVSLYPPELFPEHSD 1194

Query: 1344 ITLEDCVGTLKVPFVRELEDSIHRHLLTLSK-ISTIKIIADKSEHVTRXXXXXXXXXXXX 1168
            IT  DCV   +  F+ +L   I ++L   SK       IA   ++               
Sbjct: 1195 ITRADCVKAFRSQFLPKLSKVIEKYLKNKSKGQPNFLDIAKVDQNTGPEDAVATPKDTDD 1254

Query: 1167 XXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHG-- 994
                                        A+K K Q  DE+DYED +  E  V++ + G  
Sbjct: 1255 GETPTDDETPIHNDDHEEVADDEQDGADARKWKNQENDEVDYEDDV-METEVSDVDDGVS 1313

Query: 993  --GKEHSLGFESEID--QAEPDDDYTLGG--ENENVDDQSQIFDAED--ETXXXXXXXXX 838
               ++ S  +E E D   +E  ++  LG   E E ++  S++   E   ++         
Sbjct: 1314 SDDEDKSNMYEGEDDGNHSEKSENVGLGSITEEEAMESLSEMEGGEPFRKSGKILSKSKQ 1373

Query: 837  XXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAE 658
                 +  L K KK +    K K  RA  +D  G + E  F F +    LL+Q A+K A 
Sbjct: 1374 QDHVKQSVLEKSKKDRG---KTKKQRADTLDT-GEDLEAPFIFPKGCPYLLSQAAEKVAN 1429

Query: 657  NVYVKSSGKINRCSVIDYE------GNIP---ALQTAGVNFEAFWNMEDDLDVRKVVSND 505
            + YV+S   I++CSV+DY+      G  P   A+QTAG NF   W  E D+D++ +VSND
Sbjct: 1430 DTYVRSVLGIDQCSVVDYQPVEDYKGEPPSSVAIQTAGTNFLLMWTRE-DVDIKHLVSND 1488

Query: 504  IHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMAN 325
            IHAML TYGVEAARATI  E+++VFGSYGI+VN RHL LI+D+MT+ GG R   R G+ +
Sbjct: 1489 IHAMLKTYGVEAARATIKREIRSVFGSYGIAVNSRHLDLISDFMTAGGGLRPFTRKGI-D 1547

Query: 324  TSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
             +TSP  K+++ETATRF+V++A+HG  + LESPSAR+ LG   KMGTG   VL NL V
Sbjct: 1548 YNTSPFLKITYETATRFVVDSAIHGLEDALESPSARIVLGQVPKMGTGCISVLQNLVV 1605


>gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
          Length = 1600

 Score = 1245 bits (3222), Expect = 0.0
 Identities = 682/1198 (56%), Positives = 838/1198 (69%), Gaps = 31/1198 (2%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNS--------RISISRKLPSSRGVVTHH 3496
            +LR A++NG E+HPGAT Y D+     L  ++N         R SI++KL S+ G V+  
Sbjct: 411  RLRQAVLNGPEIHPGATLYHDEQGNTNLADNLNDSKYKNENRRNSIAKKLLSTPGAVSTD 470

Query: 3495 --GKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCS 3322
              GK   S +EGKVVYRH+QDGDIVLVNRQPTLHKPSMMAHV R+L GEKTLRMHY NCS
Sbjct: 471  VSGKGFNSNFEGKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVARILKGEKTLRMHYANCS 530

Query: 3321 TYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTK 3142
            +YNADFDGDEMNVHFPQDEI+RAEA+NI NAN+QY+VPTSG+PIRGLIQDHI+SAVLLTK
Sbjct: 531  SYNADFDGDEMNVHFPQDEIARAEAYNIVNANEQYIVPTSGEPIRGLIQDHIVSAVLLTK 590

Query: 3141 KDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTG 2962
            KDTFLT+EEYHHLLY++ VS  A     GN +KKI  + SD+EI PLLPAIWKPKP+WTG
Sbjct: 591  KDTFLTQEEYHHLLYSACVSTVAPDFKHGNLSKKISLVKSDEEIRPLLPAIWKPKPLWTG 650

Query: 2961 KQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIHGVIDKAQFGKY 2782
            KQVI+TIL+H+TRG+PPFTVK+ GRIP  YFGK + E K+L+ KNE +HGVIDKAQFGK+
Sbjct: 651  KQVISTILDHVTRGQPPFTVKRAGRIPAGYFGKKNGEYKVLVHKNELVHGVIDKAQFGKF 710

Query: 2781 GLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSD 2602
            GLVH V ELYG+  AG L SVF+RLFT +LQMHGFTCGVDDLL+ +  +M+R+R L+ S+
Sbjct: 711  GLVHAVHELYGASAAGRLFSVFTRLFTAYLQMHGFTCGVDDLLVRQCAEMDRRRKLDESE 770

Query: 2601 KIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNK 2422
             IG+HVH+ FIG+K+  ++P ++Q   E+++R KGESA   LDRMMSSALNRLTSEVNN 
Sbjct: 771  TIGDHVHSWFIGAKDAEMDPIRMQAAIEKLVRGKGESAIARLDRMMSSALNRLTSEVNNS 830

Query: 2421 LFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFH 2242
            LFP GL K+FPSNCLSLMT++GAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCF 
Sbjct: 831  LFPEGLSKSFPSNCLSLMTSSGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFL 890

Query: 2241 PWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECL 2062
            PWDS ARAGGFI+DRFL+GL PQEYYFHCMAGR+GLVDTAIKT+RSGYLQR L+K LECL
Sbjct: 891  PWDSAARAGGFISDRFLNGLRPQEYYFHCMAGREGLVDTAIKTARSGYLQRRLMKNLECL 950

Query: 2061 KVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGH-VEDAHL 1885
            +V YDHTVRD+DGSI++F YGEDGVDV KTS++T+FK LA N+K +  +L  H +EDA  
Sbjct: 951  RVNYDHTVRDSDGSIIEFIYGEDGVDVVKTSWLTEFKFLAANKKTLSARLGVHQLEDALP 1010

Query: 1884 AKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXXLAQPGEAV 1705
            ++ DSYI DLPDALE K   FI  LSKKKRD+LH                  LAQPGEAV
Sbjct: 1011 SEYDSYIKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQPGEAV 1070

Query: 1704 GVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKG 1525
            GV+AAQS+GEPSTQMTLNTFHFAG+GEMNVTLGIPRLQEIL  A+  I TPVMTCPL K 
Sbjct: 1071 GVIAAQSIGEPSTQMTLNTFHFAGQGEMNVTLGIPRLQEIL-GAAKDIRTPVMTCPLLKQ 1129

Query: 1524 RTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXXXXXXXYSD 1345
            RTRDDAERLAAKL ++  AD+IESM+V VVP+ V+N +  T+               +SD
Sbjct: 1130 RTRDDAERLAAKLSRIKFADVIESMQVHVVPFSVKNGEACTVYKLRVSLYPPELFPEHSD 1189

Query: 1344 ITLEDCVGTLKVPFVRELEDSIHRHLLTLSK-ISTIKIIADKSEHVTRXXXXXXXXXXXX 1168
            IT  DCV   +  F+ +L   I ++L   SK       IA   ++               
Sbjct: 1190 ITRADCVKAFRSQFLPKLSKVIEKYLKNKSKGQPNFLDIAKVDQNTGPEDAVATPKDTDD 1249

Query: 1167 XXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMFVTENEHG-- 994
                                        A+K K Q  DE+DYED +  E  V++ + G  
Sbjct: 1250 GETPTDDETPIHNDDHEEVADDEQDGADARKWKNQENDEVDYEDDV-METEVSDVDDGVS 1308

Query: 993  --GKEHSLGFESEID--QAEPDDDYTLGG--ENENVDDQSQIFDAED--ETXXXXXXXXX 838
               ++ S  +E E D   +E  ++  LG   E E ++  S++   E   ++         
Sbjct: 1309 SDDEDKSNMYEGEDDGNHSEKSENVGLGSITEEEAMESLSEMEGGEPFRKSGKILSKSKQ 1368

Query: 837  XXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAE 658
                 +  L K KK +    K K  RA  +D  G + E  F F +    LL+Q A+K A 
Sbjct: 1369 QDHVKQSVLEKSKKDRG---KTKKQRADTLDT-GEDLEAPFIFPKGCPYLLSQAAEKVAN 1424

Query: 657  NVYVKSSGKINRCSVIDYE------GNIP---ALQTAGVNFEAFWNMEDDLDVRKVVSND 505
            + YV+S   I++CSV+DY+      G  P   A+QTAG NF   W  E D+D++ +VSND
Sbjct: 1425 DTYVRSVLGIDQCSVVDYQPVEDYKGEPPSSVAIQTAGTNFLLMWTRE-DVDIKHLVSND 1483

Query: 504  IHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMAN 325
            IHAML TYGVEAARATI  E+++VFGSYGI+VN RHL LI+D+MT+ GG R   R G+ +
Sbjct: 1484 IHAMLKTYGVEAARATIKREIRSVFGSYGIAVNSRHLDLISDFMTAGGGLRPFTRKGI-D 1542

Query: 324  TSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
             +TSP  K+++ETATRF+V++A+HG  + LESPSAR+ LG   KMGTG   VL NL V
Sbjct: 1543 YNTSPFLKITYETATRFVVDSAIHGLEDALESPSARIVLGQVPKMGTGCISVLQNLVV 1600


>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score = 1240 bits (3208), Expect = 0.0
 Identities = 675/1247 (54%), Positives = 833/1247 (66%), Gaps = 80/1247 (6%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+A+ING E HPGATHYVDK +  KLP +   R+S++RKL          G+S + EY
Sbjct: 477  KLRNAVINGPESHPGATHYVDKLSTTKLPPNRKMRVSVARKLS---------GRSFDYEY 527

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCSTYNADFDGDE
Sbjct: 528  EGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDE 587

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVHFPQDE+SRAE +NI NAN QYV P++G+PIR LIQDHIISAVLLTKKDTFLT +E 
Sbjct: 588  MNVHFPQDEVSRAEGYNIVNANNQYVRPSNGEPIRSLIQDHIISAVLLTKKDTFLTEDEV 647

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S VS     S  G   +K+  +S +DEI  L PAI KP  +W+GKQ+IT +LNH
Sbjct: 648  YQLLYSSGVSNARPTSFSGRAGRKVIFLSYEDEIETLDPAIRKPIYLWSGKQLITAVLNH 707

Query: 2931 ITRGRPPFTVKKDGRIPQDYF------GKNS--------------------------REN 2848
            ITRG PPFTV+K G++  D+F      GK+S                           ++
Sbjct: 708  ITRGHPPFTVEKGGKLSYDFFKSKIKNGKSSNGEKVGVSKPMKEKESGKVNPKEKQLEDD 767

Query: 2847 KLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCG 2668
            K++I +N  + GVIDKAQFG+YGLVHTVQEL+G+  AG LLSVFSRLFT +LQMHGFTCG
Sbjct: 768  KMIIFRNVLVQGVIDKAQFGEYGLVHTVQELFGAKAAGTLLSVFSRLFTAYLQMHGFTCG 827

Query: 2667 VDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDH--VEPGKLQRETERIIRTKGE 2494
            VDDLLI K  D ERK+ LE+ +K GE +H KFIG K+++  ++P +LQ   E+ IR+ GE
Sbjct: 828  VDDLLITKIKDDERKKQLENCEKCGEQIHRKFIGIKDENIKIDPLELQSNIEKTIRSDGE 887

Query: 2493 SAAMSLDRMMSSALNRLTSE-VNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISS 2317
            SA   LDR M++ LN  TS  V N+L   GLLK    NC+SLMTT+GAKG  VNF QISS
Sbjct: 888  SALTYLDRQMTNELNSKTSSGVINELLSEGLLKPSGKNCISLMTTSGAKGSKVNFQQISS 947

Query: 2316 LLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDG 2137
             LGQQELEGKRVPRMVSGKTLPCFHPWD  ARAGG+I DRFL+GL PQEYYFHCMAGR+G
Sbjct: 948  FLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRPQEYYFHCMAGREG 1007

Query: 2136 LVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQ 1957
            LVDTA+KTSRSGYLQRCL+K LECL++ YDHTVRDADGSIVQF YGEDGVDVH+T FI +
Sbjct: 1008 LVDTAVKTSRSGYLQRCLIKNLECLRIGYDHTVRDADGSIVQFYYGEDGVDVHQTGFIAK 1067

Query: 1956 FKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKK------- 1798
            F+ LA N++I+ EK         L   ++YI++LP+AL+ KA+ F+ +++K++       
Sbjct: 1068 FEALAANREIIYEK------SDELGTFNAYISELPEALKEKAEIFLRNIAKEQSSLHDYT 1121

Query: 1797 RDTLHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMN 1618
            +D                     LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGRGEMN
Sbjct: 1122 KDRSSNLVEHDFYKLLKQKFFLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMN 1181

Query: 1617 VTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSV 1438
            VTLGIPRLQEIL  AS  I TP+MTCPL++GRT++DAERL+ KLKKV VADIIESMEVSV
Sbjct: 1182 VTLGIPRLQEILMTASADIKTPIMTCPLQEGRTKEDAERLSDKLKKVTVADIIESMEVSV 1241

Query: 1437 VPYFVQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTL 1258
            +P+ VQN  +  I               ++DI++E+   TL+V FVRELED+I  HL+ L
Sbjct: 1242 MPFAVQNDGICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNHLVLL 1301

Query: 1257 SKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQ 1078
            SKIS IK    +S   T                +                         Q
Sbjct: 1302 SKISGIKNFLKESHSGTPIEAEEDVSGNISHEGE------NDDDSDDEGEEADDLGLDVQ 1355

Query: 1077 KRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDD 898
            KRK+Q  DEMDY+DG +  +   E +  G +   G ES+ + A+ + + +  G    VD+
Sbjct: 1356 KRKQQVTDEMDYDDGSEGLLNEDEGDLSGSQAPSGSESDTEPADKESEISNTG---MVDN 1412

Query: 897  QSQIFD----------------AEDETXXXXXXXXXXXXXSEDNLAKQKKPKAHLIKKKT 766
             S+ F+                  + +              +   AK KK ++ L+KK  
Sbjct: 1413 DSEYFEKPSHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDF 1472

Query: 765  DRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYEGN--- 595
            DR+I V+A+GL+FE+H +F  EPHILL +IAQK A+ V +++ GK+ RC V D + N   
Sbjct: 1473 DRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVTDCKENQVI 1532

Query: 594  -------------------IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVE 472
                               IPAL T GV+F  FW M+D LDVR + SN IH ML  YGVE
Sbjct: 1533 YYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVE 1592

Query: 471  AARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSF 292
            AAR TI+ E+K VF SYGISVN RHL+LIADYMT  G YR M+RIG  + S SP+ KMSF
Sbjct: 1593 AARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSF 1652

Query: 291  ETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            ETA++FIVEA LH EV+ LE+PSARV LGLP+KMGTG+FD++  L++
Sbjct: 1653 ETASKFIVEATLHREVDNLEAPSARVCLGLPVKMGTGSFDLMQKLEI 1699


>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score = 1234 bits (3192), Expect = 0.0
 Identities = 676/1215 (55%), Positives = 817/1215 (67%), Gaps = 49/1215 (4%)
 Frame = -2

Query: 3648 LRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEYE 3469
            LR AIING + HPGATHY+DK + +KLP +   RISISR+LPSSRGVVT  G+S ++E E
Sbjct: 496  LRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISISRRLPSSRGVVTQAGRSSDNEVE 555

Query: 3468 GKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDEM 3289
            GK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCSTYNADFDGDEM
Sbjct: 556  GKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 615

Query: 3288 NVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEYH 3109
            NVHFPQD+ISRAEA+NI NAN QYV PT+G PIR LIQDHI+SA +LTKKDTFL  +E++
Sbjct: 616  NVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQDHIVSAAILTKKDTFLNYDEFN 675

Query: 3108 HLLYASHVSVTALRSSIGNFTK--KICTISSDDEITPLLPAIWKPKPMWTGKQVITTILN 2935
            HLLY+S VS     +  G+F K  K   I+ +D +   +PAIWKP+P+WTGKQ+I  +L+
Sbjct: 676  HLLYSSGVSA----AGSGSFRKLGKKVAINFEDNLLSPVPAIWKPEPLWTGKQLIGAVLD 731

Query: 2934 HITRGRPPFTVKKDGRIPQDYFGKNSR----------------------ENKLLIQKNEF 2821
            H+TRG PPFTV+K G+IP D+F +  +                      E+ +LI KN  
Sbjct: 732  HLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTNKDKERERNEEPGEDTVLIFKNYL 791

Query: 2820 IHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKH 2641
            I GVIDKAQFG YGLVHT QELYGS+ AGILLS FSRLFT FLQ+HGFTCGVDDLL++K 
Sbjct: 792  ICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSRLFTAFLQLHGFTCGVDDLLLSKD 851

Query: 2640 YDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMS 2461
             D +R++ LE  +  GE VH + +G  ND ++P +LQ + E +IR+ G+SA  +LDR M 
Sbjct: 852  IDEKRQQQLEECENCGEEVHCEVVG-VNDFIDPAELQLKIEEVIRSNGDSALTNLDRRMI 910

Query: 2460 SALNRLTS-EVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKR 2284
            S LN L+S ++   L   GL K    NC+SLMTT+GAKGG  NF QISS LGQQELEG+R
Sbjct: 911  SRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGAKGGTANFQQISSHLGQQELEGRR 970

Query: 2283 VPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRS 2104
            VPRMVSGKTLPCF PWD  +RAGGFI DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSRS
Sbjct: 971  VPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 1030

Query: 2103 GYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIV 1924
            GYLQRCLVK LECLKV YDHTVRDADGSIVQF YGEDG+DVHKTSF+ +F  L  N  I+
Sbjct: 1031 GYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGEDGIDVHKTSFVAKFDALLANHDIM 1090

Query: 1923 LEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFI--GSLSKKKRDTLHXXXXXXXXXXX 1750
              K S       L KS+SYI DLP+AL+ KA  FI   +LS  +                
Sbjct: 1091 KAKYS-----TELRKSNSYITDLPEALKDKANKFICDRNLSVPRLARNEILKPEDFVKSV 1145

Query: 1749 XXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRAS 1570
                   LAQPGE VG++AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS
Sbjct: 1146 EQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTAS 1205

Query: 1569 YKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXX 1390
              I TP+MTCPL +GR++ DA  LA KLKK+ VA++IESMEV+VVP+ V N QV +I   
Sbjct: 1206 TDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMIESMEVAVVPFAVNNHQVCSIYKL 1265

Query: 1389 XXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHV 1210
                            +++ C   L+V ++RELED+I  HLL LSKIS IK       + 
Sbjct: 1266 KMKLKRPKV------FSVKHCEEILEVVYLRELEDAIQNHLLLLSKISGIK-------NF 1312

Query: 1209 TRXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGL 1030
            T                +                         QKRKRQA DEM+YEDG 
Sbjct: 1313 TSSETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLGFDGQKRKRQATDEMEYEDGY 1372

Query: 1029 DNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXX 850
                   E E    E S G ES+ DQA   +D  +G + +     +    +  +T     
Sbjct: 1373 -------EEERNEPELSAGLESDGDQA---NDVDIGEDGDGPPGIAPEIVSPSKT----- 1417

Query: 849  XXXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQ 670
                    S+D   K+ + K   + K+ DRAI V A GL+FEVHFRF  EPH+LL QIAQ
Sbjct: 1418 KKSKKNAKSDDEGKKRVRTK---VIKEFDRAIFVAANGLDFEVHFRFTNEPHVLLGQIAQ 1474

Query: 669  KAAENVYVKSSGKINRCSVIDYEGN----------------------IPALQTAGVNFEA 556
            K A+ VY++SSGKI  C VI  + N                      IPA+ T G +F A
Sbjct: 1475 KVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQKIEAKDKEAIPAINTNGADFCA 1534

Query: 555  FWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADY 376
             W M+D LD+R + SNDIHAML TYGVEAAR TI+ EV+ VFGSYGISV++RHLTLIAD+
Sbjct: 1535 LWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFGSYGISVDMRHLTLIADF 1594

Query: 375  MTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPI 196
            MT AGGYR MNR+G    S SP  KMSFETA++FIV+AA HG V+ LE+PSAR+ LGLP+
Sbjct: 1595 MTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDAAYHGVVDNLETPSARICLGLPM 1654

Query: 195  KMGTGAFDVLHNLQV 151
            KMGTG+FD+L  +++
Sbjct: 1655 KMGTGSFDLLQKIEL 1669


>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score = 1234 bits (3192), Expect = 0.0
 Identities = 676/1215 (55%), Positives = 817/1215 (67%), Gaps = 49/1215 (4%)
 Frame = -2

Query: 3648 LRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEYE 3469
            LR AIING + HPGATHY+DK + +KLP +   RISISR+LPSSRGVVT  G+S ++E E
Sbjct: 496  LRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISISRRLPSSRGVVTQAGRSSDNEVE 555

Query: 3468 GKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDEM 3289
            GK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCSTYNADFDGDEM
Sbjct: 556  GKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 615

Query: 3288 NVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEYH 3109
            NVHFPQD+ISRAEA+NI NAN QYV PT+G PIR LIQDHI+SA +LTKKDTFL  +E++
Sbjct: 616  NVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQDHIVSAAILTKKDTFLNYDEFN 675

Query: 3108 HLLYASHVSVTALRSSIGNFTK--KICTISSDDEITPLLPAIWKPKPMWTGKQVITTILN 2935
            HLLY+S VS     +  G+F K  K   I+ +D +   +PAIWKP+P+WTGKQ+I  +L+
Sbjct: 676  HLLYSSGVSA----AGSGSFRKLGKKVAINFEDNLLSPVPAIWKPEPLWTGKQLIGAVLD 731

Query: 2934 HITRGRPPFTVKKDGRIPQDYFGKNSR----------------------ENKLLIQKNEF 2821
            H+TRG PPFTV+K G+IP D+F +  +                      E+ +LI KN  
Sbjct: 732  HLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTNKDKERERNEEPGEDTVLIFKNYL 791

Query: 2820 IHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKH 2641
            I GVIDKAQFG YGLVHT QELYGS+ AGILLS FSRLFT FLQ+HGFTCGVDDLL++K 
Sbjct: 792  ICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSRLFTAFLQLHGFTCGVDDLLLSKD 851

Query: 2640 YDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMS 2461
             D +R++ LE  +  GE VH + +G  ND ++P +LQ + E +IR+ G+SA  +LDR M 
Sbjct: 852  IDEKRQQQLEECENCGEEVHCEVVG-VNDFIDPAELQLKIEEVIRSNGDSALTNLDRRMI 910

Query: 2460 SALNRLTS-EVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKR 2284
            S LN L+S ++   L   GL K    NC+SLMTT+GAKGG  NF QISS LGQQELEG+R
Sbjct: 911  SRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGAKGGTANFQQISSHLGQQELEGRR 970

Query: 2283 VPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRS 2104
            VPRMVSGKTLPCF PWD  +RAGGFI DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSRS
Sbjct: 971  VPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 1030

Query: 2103 GYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIV 1924
            GYLQRCLVK LECLKV YDHTVRDADGSIVQF YGEDG+DVHKTSF+ +F  L  N  I+
Sbjct: 1031 GYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGEDGIDVHKTSFVAKFDALLANHDIM 1090

Query: 1923 LEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFI--GSLSKKKRDTLHXXXXXXXXXXX 1750
              K S       L KS+SYI DLP+AL+ KA  FI   +LS  +                
Sbjct: 1091 KAKYS-----TELRKSNSYITDLPEALKDKANKFICDRNLSVPRLARNEILKPEDFVKSV 1145

Query: 1749 XXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRAS 1570
                   LAQPGE VG++AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS
Sbjct: 1146 EQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTAS 1205

Query: 1569 YKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXX 1390
              I TP+MTCPL +GR++ DA  LA KLKK+ VA++IESMEV+VVP+ V N QV +I   
Sbjct: 1206 TDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMIESMEVAVVPFAVNNHQVCSIYKL 1265

Query: 1389 XXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHV 1210
                            +++ C   L+V ++RELED+I  HLL LSKIS IK       + 
Sbjct: 1266 KMKLKRPKV------FSVKHCEEILEVVYLRELEDAIQNHLLLLSKISGIK-------NF 1312

Query: 1209 TRXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGL 1030
            T                +                         QKRKRQA DEM+YEDG 
Sbjct: 1313 TSSETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLGFDGQKRKRQATDEMEYEDGY 1372

Query: 1029 DNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXX 850
                   E E    E S G ES+ DQA   +D  +G + +     +    +  +T     
Sbjct: 1373 -------EEERNEPELSAGLESDGDQA---NDVDIGEDGDGPPGIAPEIVSPSKT----- 1417

Query: 849  XXXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQ 670
                    S+D   K+ + K   + K+ DRAI V A GL+FEVHFRF  EPH+LL QIAQ
Sbjct: 1418 KKSKKNAKSDDEGKKRVRTK---VIKEFDRAIFVAANGLDFEVHFRFTNEPHVLLGQIAQ 1474

Query: 669  KAAENVYVKSSGKINRCSVIDYEGN----------------------IPALQTAGVNFEA 556
            K A+ VY++SSGKI  C VI  + N                      IPA+ T G +F A
Sbjct: 1475 KVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQKIEAKDKEAIPAINTNGADFCA 1534

Query: 555  FWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADY 376
             W M+D LD+R + SNDIHAML TYGVEAAR TI+ EV+ VFGSYGISV++RHLTLIAD+
Sbjct: 1535 LWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFGSYGISVDMRHLTLIADF 1594

Query: 375  MTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPI 196
            MT AGGYR MNR+G    S SP  KMSFETA++FIV+AA HG V+ LE+PSAR+ LGLP+
Sbjct: 1595 MTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDAAYHGVVDNLETPSARICLGLPM 1654

Query: 195  KMGTGAFDVLHNLQV 151
            KMGTG+FD+L  +++
Sbjct: 1655 KMGTGSFDLLQKIEL 1669


>gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
          Length = 1606

 Score = 1234 bits (3192), Expect = 0.0
 Identities = 676/1215 (55%), Positives = 817/1215 (67%), Gaps = 49/1215 (4%)
 Frame = -2

Query: 3648 LRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEYE 3469
            LR AIING + HPGATHY+DK + +KLP +   RISISR+LPSSRGVVT  G+S ++E E
Sbjct: 433  LRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISISRRLPSSRGVVTQAGRSSDNEVE 492

Query: 3468 GKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDEM 3289
            GK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHY NCSTYNADFDGDEM
Sbjct: 493  GKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEM 552

Query: 3288 NVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEYH 3109
            NVHFPQD+ISRAEA+NI NAN QYV PT+G PIR LIQDHI+SA +LTKKDTFL  +E++
Sbjct: 553  NVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQDHIVSAAILTKKDTFLNYDEFN 612

Query: 3108 HLLYASHVSVTALRSSIGNFTK--KICTISSDDEITPLLPAIWKPKPMWTGKQVITTILN 2935
            HLLY+S VS     +  G+F K  K   I+ +D +   +PAIWKP+P+WTGKQ+I  +L+
Sbjct: 613  HLLYSSGVSA----AGSGSFRKLGKKVAINFEDNLLSPVPAIWKPEPLWTGKQLIGAVLD 668

Query: 2934 HITRGRPPFTVKKDGRIPQDYFGKNSR----------------------ENKLLIQKNEF 2821
            H+TRG PPFTV+K G+IP D+F +  +                      E+ +LI KN  
Sbjct: 669  HLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTNKDKERERNEEPGEDTVLIFKNYL 728

Query: 2820 IHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKH 2641
            I GVIDKAQFG YGLVHT QELYGS+ AGILLS FSRLFT FLQ+HGFTCGVDDLL++K 
Sbjct: 729  ICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSRLFTAFLQLHGFTCGVDDLLLSKD 788

Query: 2640 YDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMS 2461
             D +R++ LE  +  GE VH + +G  ND ++P +LQ + E +IR+ G+SA  +LDR M 
Sbjct: 789  IDEKRQQQLEECENCGEEVHCEVVG-VNDFIDPAELQLKIEEVIRSNGDSALTNLDRRMI 847

Query: 2460 SALNRLTS-EVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKR 2284
            S LN L+S ++   L   GL K    NC+SLMTT+GAKGG  NF QISS LGQQELEG+R
Sbjct: 848  SRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGAKGGTANFQQISSHLGQQELEGRR 907

Query: 2283 VPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRS 2104
            VPRMVSGKTLPCF PWD  +RAGGFI DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSRS
Sbjct: 908  VPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 967

Query: 2103 GYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIV 1924
            GYLQRCLVK LECLKV YDHTVRDADGSIVQF YGEDG+DVHKTSF+ +F  L  N  I+
Sbjct: 968  GYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGEDGIDVHKTSFVAKFDALLANHDIM 1027

Query: 1923 LEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFI--GSLSKKKRDTLHXXXXXXXXXXX 1750
              K S       L KS+SYI DLP+AL+ KA  FI   +LS  +                
Sbjct: 1028 KAKYS-----TELRKSNSYITDLPEALKDKANKFICDRNLSVPRLARNEILKPEDFVKSV 1082

Query: 1749 XXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRAS 1570
                   LAQPGE VG++AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS
Sbjct: 1083 EQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTAS 1142

Query: 1569 YKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXX 1390
              I TP+MTCPL +GR++ DA  LA KLKK+ VA++IESMEV+VVP+ V N QV +I   
Sbjct: 1143 TDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMIESMEVAVVPFAVNNHQVCSIYKL 1202

Query: 1389 XXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHV 1210
                            +++ C   L+V ++RELED+I  HLL LSKIS IK       + 
Sbjct: 1203 KMKLKRPKV------FSVKHCEEILEVVYLRELEDAIQNHLLLLSKISGIK-------NF 1249

Query: 1209 TRXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGL 1030
            T                +                         QKRKRQA DEM+YEDG 
Sbjct: 1250 TSSETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLGFDGQKRKRQATDEMEYEDGY 1309

Query: 1029 DNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXX 850
                   E E    E S G ES+ DQA   +D  +G + +     +    +  +T     
Sbjct: 1310 -------EEERNEPELSAGLESDGDQA---NDVDIGEDGDGPPGIAPEIVSPSKT----- 1354

Query: 849  XXXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQ 670
                    S+D   K+ + K   + K+ DRAI V A GL+FEVHFRF  EPH+LL QIAQ
Sbjct: 1355 KKSKKNAKSDDEGKKRVRTK---VIKEFDRAIFVAANGLDFEVHFRFTNEPHVLLGQIAQ 1411

Query: 669  KAAENVYVKSSGKINRCSVIDYEGN----------------------IPALQTAGVNFEA 556
            K A+ VY++SSGKI  C VI  + N                      IPA+ T G +F A
Sbjct: 1412 KVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQKIEAKDKEAIPAINTNGADFCA 1471

Query: 555  FWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADY 376
             W M+D LD+R + SNDIHAML TYGVEAAR TI+ EV+ VFGSYGISV++RHLTLIAD+
Sbjct: 1472 LWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFGSYGISVDMRHLTLIADF 1531

Query: 375  MTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPI 196
            MT AGGYR MNR+G    S SP  KMSFETA++FIV+AA HG V+ LE+PSAR+ LGLP+
Sbjct: 1532 MTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDAAYHGVVDNLETPSARICLGLPM 1591

Query: 195  KMGTGAFDVLHNLQV 151
            KMGTG+FD+L  +++
Sbjct: 1592 KMGTGSFDLLQKIEL 1606


>gb|KHN22373.1| DNA-directed RNA polymerase I subunit rpa1 [Glycine soja]
          Length = 1293

 Score = 1227 bits (3175), Expect = 0.0
 Identities = 673/1210 (55%), Positives = 811/1210 (67%), Gaps = 43/1210 (3%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+AI+NG E HPGATHY DK +++KLP         SRKLP+SRGV+ H GK  + E+
Sbjct: 115  KLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEF 174

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHL+DGD+VLVNRQPTLHKPS+MAH+VRVL GEKT+RMHY NCSTYNADFDGDE
Sbjct: 175  EGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDE 234

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            +NVHFPQDEISRAEA+NI NAN QYV PTSGDPIR LIQDHI+SA LLTKKDTFL+ EE+
Sbjct: 235  INVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEF 294

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S VS+  L S  G   +K+   +S+ E+    PAIWKP+P+WTGKQVI+ +L +
Sbjct: 295  NQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGKQVISALLYY 354

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSR-----------------ENKLLIQKNEFIHGVID 2803
            ITRG PPFT +K+ +IP ++F    R                 E+KLLI KN+ + GV+D
Sbjct: 355  ITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYKNDLVRGVVD 414

Query: 2802 KAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERK 2623
            KAQFG YG++HTVQELYGS+ AG LLS  SRLFT FLQMHGFTCGVDDL++ +  D+ER 
Sbjct: 415  KAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERM 474

Query: 2622 RMLESSDKIGEHVHAKFIGSKN-DHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALN- 2449
              L+S + IG+ VH +FIG KN D+++P  LQ   E+ IR+ GE AA++LDR M+S LN 
Sbjct: 475  NQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGE-AALTLDRKMTSNLNS 533

Query: 2448 RLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMV 2269
            R +S +  KL   G+LK    NC+SLMTT+GAKG +VNF QISS LGQQELEGKRVPRMV
Sbjct: 534  RTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMV 593

Query: 2268 SGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQR 2089
            SGKTLPCF PWD + RAGGFI DRFL+ L PQEYYFHCMAGR+GLVDTA+KTSRSGYLQR
Sbjct: 594  SGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 653

Query: 2088 CLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLS 1909
            CL+K LECLKVCYDHTVRDADGSI+QF YGEDGVDVH+TSFIT+F  L+TN+++V     
Sbjct: 654  CLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYC 713

Query: 1908 GHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXX 1729
                   L +S  YIN LP+ALE KA+ F       K+  L                   
Sbjct: 714  -----RQLDRSSPYINKLPEALEGKAEKF------SKQRNLGSMEQADFLRLMEHKYVSC 762

Query: 1728 LAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPV 1549
            LAQPGE VGVLA+QSVGEP+TQMTLNTFH AGRGEMNVTLGIPRLQEIL  A+  I TP 
Sbjct: 763  LAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPF 822

Query: 1548 MTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXX 1369
            MTCPLR  ++  DA  LA KLKK+ VADII+SM+VSVVP  V   QV +I          
Sbjct: 823  MTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKS 882

Query: 1368 XXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIA--DKSEHVTRXXX 1195
                 Y+DITL+D   TL+V FVRELED+I  H+  LSKIS IK      +S +      
Sbjct: 883  KQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSED 942

Query: 1194 XXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMF 1015
                        Q                        AQKRK Q  DE+DYEDG +    
Sbjct: 943  AHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPE---- 998

Query: 1014 VTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXXXXXX 835
              E  H G+        EI+  E   D        NV D +     E  +          
Sbjct: 999  --EETHDGE-----LSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPS-------KSK 1044

Query: 834  XXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAEN 655
                + NL ++KK K+    KK DRAI V+A+G +FE+HFRF  EPHILLTQIAQ+ A+ 
Sbjct: 1045 TIDEKQNLKREKK-KSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKK 1103

Query: 654  VYVKSSGKINRCSVID-------YEG---------------NIPALQTAGVNFEAFWNME 541
            V +++ GK+  C  I        Y G                IPALQT+GV+F+ FW +E
Sbjct: 1104 VCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPALQTSGVHFKTFWELE 1163

Query: 540  DDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAG 361
            DDLDVR + SN++HAMLN YGVEAAR TI+ EV+ VF SYGISVNIRHLTLIAD+MT  G
Sbjct: 1164 DDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTG 1223

Query: 360  GYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTG 181
             YR MNR G    STSP  KM FETA +FIVEAA HG+V+ LE+PSAR+ LGLP+KMGTG
Sbjct: 1224 SYRPMNRTGSIADSTSPFIKMCFETAGKFIVEAAYHGQVDNLETPSARICLGLPVKMGTG 1283

Query: 180  AFDVLHNLQV 151
              D++  L++
Sbjct: 1284 CHDLIQKLEI 1293


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1226 bits (3173), Expect = 0.0
 Identities = 673/1210 (55%), Positives = 810/1210 (66%), Gaps = 43/1210 (3%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+AI+NG E HPGATHY DK +++KLP         SRKLP+SRGV+ H GK  + E+
Sbjct: 473  KLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEF 532

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            EGKVVYRHL+DGD+VLVNRQPTLHKPS+MAH+VRVL GEKT+RMHY NCSTYNADFDGDE
Sbjct: 533  EGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDE 592

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            +NVHFPQDEISRAEA+NI NAN QYV PTSGDPIR LIQDHI+SA LLTKKDTFL+ EE+
Sbjct: 593  INVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEF 652

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S VS+  L S  G   +K+   +S+ E+    PAIWKP+P+WTGKQVI+ +L +
Sbjct: 653  NQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGKQVISALLYY 712

Query: 2931 ITRGRPPFTVKKDGRIPQDYFGKNSR-----------------ENKLLIQKNEFIHGVID 2803
            ITRG PPFT +K+ +IP ++F    R                 E+KLLI KN+ + GV+D
Sbjct: 713  ITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYKNDLVRGVVD 772

Query: 2802 KAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERK 2623
            KAQFG YG++HTVQELYGS+ AG LLS  SRLFT FLQMHGFTCGVDDL++ +  D+ER 
Sbjct: 773  KAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERM 832

Query: 2622 RMLESSDKIGEHVHAKFIGSKN-DHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALN- 2449
              L+S + IG+ VH +FIG KN D+++P  LQ   E+ IR+ GE AA++LDR M+S LN 
Sbjct: 833  NQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGE-AALTLDRKMTSNLNS 891

Query: 2448 RLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMV 2269
            R +S +  KL   G+LK    NC+SLMTT+GAKG +VNF QISS LGQQELEGKRVPRMV
Sbjct: 892  RTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMV 951

Query: 2268 SGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQR 2089
            SGKTLPCF PWD + RAGGFI DRFL+ L PQEYYFHCMAGR+GLVDTA+KTSRSGYLQR
Sbjct: 952  SGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 1011

Query: 2088 CLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLS 1909
            CL+K LECLKVCYDHTVRDADGSI+QF YGEDGVDVH+TSFIT+F  L+TN+++V     
Sbjct: 1012 CLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYC 1071

Query: 1908 GHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTLHXXXXXXXXXXXXXXXXXX 1729
                   L +S  YIN LP+ALE KA+ F       K+  L                   
Sbjct: 1072 -----RQLDRSSPYINKLPEALEGKAEKF------SKQRNLGSMEQADFLRLMEHKYVSC 1120

Query: 1728 LAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPV 1549
            LAQPGE VGVLA+QSVGEP+TQMTLNTFH AGRGEMNVTLGIPRLQEIL  A+  I TP 
Sbjct: 1121 LAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPF 1180

Query: 1548 MTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQNQQVSTIXXXXXXXXXX 1369
            MTCPLR  ++  DA  LA KLKK+ VADII+SM+VSVVP  V   QV +I          
Sbjct: 1181 MTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKS 1240

Query: 1368 XXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIA--DKSEHVTRXXX 1195
                 Y+DITL+D   TL+V FVRELED+I  H+  LSKIS IK      +S +      
Sbjct: 1241 KQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSED 1300

Query: 1194 XXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKRQAADEMDYEDGLDNEMF 1015
                        Q                        AQKRK Q  DE+DYEDG +    
Sbjct: 1301 AHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPE---- 1356

Query: 1014 VTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXXXXXX 835
              E  H G+        EI+  E   D        NV D +     E  +          
Sbjct: 1357 --EETHDGE-----LSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPS-------KSK 1402

Query: 834  XXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAEN 655
                + NL ++KK K+    KK DRAI V+A+G +FE+HFRF  EPHILLTQIAQ+ A+ 
Sbjct: 1403 TIDEKQNLKREKK-KSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKK 1461

Query: 654  VYVKSSGKINRCSVID-------YEG---------------NIPALQTAGVNFEAFWNME 541
            V +++ GK+  C  I        Y G                IPALQT+GV+F+ FW +E
Sbjct: 1462 VCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPALQTSGVHFKTFWELE 1521

Query: 540  DDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAG 361
            DDLDVR + SN++HAMLN YGVEAAR TI+ EV+ VF SYGISVNIRHLTLIAD+MT  G
Sbjct: 1522 DDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTG 1581

Query: 360  GYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTG 181
             YR MNR G    STSP  KM FETA  FIVEAA HG+V+ LE+PSAR+ LGLP+KMGTG
Sbjct: 1582 SYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTG 1641

Query: 180  AFDVLHNLQV 151
              D++  L++
Sbjct: 1642 CHDLIQKLEI 1651


>ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Prunus mume]
          Length = 1637

 Score = 1220 bits (3157), Expect = 0.0
 Identities = 666/1230 (54%), Positives = 822/1230 (66%), Gaps = 63/1230 (5%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+AI+NG+E+HPGAT YVDKS    L  +   RISISRKLPSS+G V  HGK  +++ 
Sbjct: 419  KLRNAIVNGSEIHPGATQYVDKSGPKILRQNRRERISISRKLPSSKGAVMQHGKGSDNDI 478

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            E K+V+RHL+DGDIVLVNRQPTLHKPS+MAHVVRVL GEKT+RMHY NCSTYNADFDGDE
Sbjct: 479  ESKIVHRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDE 538

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVHFPQDEISR+EA+NI NAN QYV PTSGDPIR LIQDH+ISAVLLTKKDTFL  +++
Sbjct: 539  MNVHFPQDEISRSEAYNIVNANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWDQF 598

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S VS     +  G   KK+   +S+  + PLLPAIWKP+P+WTGKQVIT +LNH
Sbjct: 599  NQLLYSSCVSARVSDAFSGKPDKKVFMFNSEGTMQPLLPAIWKPEPLWTGKQVITALLNH 658

Query: 2931 ITRGRPPFTVKKDGRIPQDYF-----------GKNSR----------------------- 2854
            ITRG PP TV++D +IP+ +F           GK+ +                       
Sbjct: 659  ITRGSPPVTVERDAKIPRGFFNCKNVEGEDKSGKDGQQKKRKPSKEQATDKDSSKEKEEP 718

Query: 2853 -ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGF 2677
             EN LLI +N  + GVIDKAQFG YGLVHTVQE YGSDTAG LLSV S LFTV+LQMHGF
Sbjct: 719  DENHLLIYRNNLVRGVIDKAQFGDYGLVHTVQEFYGSDTAGKLLSVLSHLFTVYLQMHGF 778

Query: 2676 TCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKN-DHVEPGKLQRETERIIRTK 2500
            TCG+DDLL+ +  D + K  LES + +GE+V+  FI  K+    +P +LQ   E  IR+ 
Sbjct: 779  TCGIDDLLLLESKDAKMKDQLESCEDVGENVYRDFIEVKDVKRKDPVELQLNIENFIRSN 838

Query: 2499 GESAAMSLDRMMSSALNRLT--SEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQ 2326
            GESA  SLDR M S LN  T  S+V  +L   GL K    NC+ LMTT+GAKG + N  Q
Sbjct: 839  GESALASLDRRMISQLNNKTSNSDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQ 898

Query: 2325 ISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAG 2146
            I+S LGQQELEGKRVP+M+SGKTLPCF PWD ++RAGGFI DRFL+GL PQEYYFHCMAG
Sbjct: 899  ITSYLGQQELEGKRVPQMISGKTLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAG 958

Query: 2145 RDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSF 1966
            R+GLVDTA+KTSRSGYLQRC++K LECLKV YD+TVRDADGSI+QF YGEDG+DVH TSF
Sbjct: 959  REGLVDTAVKTSRSGYLQRCIIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSF 1018

Query: 1965 ITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTL 1786
            I +F+ L  N+++  +K    ++     K + YI DLP AL+ KA+ F+ +L+ K++D  
Sbjct: 1019 IQKFESLIANKEMFHKKGRRQMD-----KLNPYIKDLPLALKEKAEKFVHNLALKEKD-- 1071

Query: 1785 HXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLG 1606
                               LAQPGE VGVLA QSVGEPSTQMTLNTFH AGRGEMNVTLG
Sbjct: 1072 -HNFQEDFLKLMEHKYLCSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLG 1130

Query: 1605 IPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYF 1426
            IPRLQEIL  A+  I TPVMTCPL+KGR++++A+ LA KLKK+ VADIIESM+V+ VP+F
Sbjct: 1131 IPRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFF 1190

Query: 1425 VQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKIS 1246
            +Q+ Q   I                 + + ED    L++ FVRELED+I  H+L LSKIS
Sbjct: 1191 IQDGQTCRIYKLEMTLHIPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKIS 1250

Query: 1245 TIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKR 1066
             IK     S+                  ++                        A KRK 
Sbjct: 1251 GIKNFTPDSQ-PKASNETDENLSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKL 1309

Query: 1065 QAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVD--DQS 892
            QA DEMDYEDG D+E+   +   G        ESEID+ E + +    GE   +D  D+ 
Sbjct: 1310 QATDEMDYEDGCDDEVREADLSDGD-------ESEIDEEENEVEIGKDGEIGVIDASDEM 1362

Query: 891  QIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFR 712
                 E+               S   + K++K +A ++KK+TDRAI V A+G +FEVHFR
Sbjct: 1363 PGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFR 1422

Query: 711  F-KQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYEGN-------------------- 595
            F   EPHILL+QIAQK A+ VY++ SGK+  C  I  + N                    
Sbjct: 1423 FTDNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDPENKQSFSSKEK 1482

Query: 594  --IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSY 421
              +PALQT G++F  FW ++D LDVR + SN+IHAMLNTYGVEAAR TI+ E+  VF SY
Sbjct: 1483 KEMPALQTTGIDFGTFWQLQDILDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSY 1542

Query: 420  GISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVE 241
            GISVNIRHLTLIAD+MT AGGYR +NR G    S SP  KM+FETA++FIVEAA HG+V+
Sbjct: 1543 GISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVD 1602

Query: 240  RLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            RLE+PSAR+ LGLP+ +GTG FD++H ++V
Sbjct: 1603 RLETPSARICLGLPVNVGTGCFDLMHKMEV 1632


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score = 1219 bits (3153), Expect = 0.0
 Identities = 664/1230 (53%), Positives = 819/1230 (66%), Gaps = 63/1230 (5%)
 Frame = -2

Query: 3651 KLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGVVTHHGKSLESEY 3472
            KLR+AI+NG+E+HPGAT YVDKS    L  +   RISISRKLPSS+G V  HGK  +++ 
Sbjct: 394  KLRNAIVNGSEIHPGATQYVDKSGPKILRQNRRERISISRKLPSSKGAVMQHGKGSDNDI 453

Query: 3471 EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDE 3292
            E K+V+RHL+DGDIVLVNRQPTLHKPS+MAHVVRVL GEKT+RMHY NCSTYNADFDGDE
Sbjct: 454  ESKIVHRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDE 513

Query: 3291 MNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEY 3112
            MNVHFPQDEISR+EA+NI NAN QYV PTSGDPIR LIQDH+ISAVLLTKKDTFL  +++
Sbjct: 514  MNVHFPQDEISRSEAYNIVNANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWDQF 573

Query: 3111 HHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMWTGKQVITTILNH 2932
            + LLY+S VS     +  G   KK+   +S+  + PLLPAIWKP+P+WTGKQVIT +LNH
Sbjct: 574  NQLLYSSCVSARVSDAFSGKPDKKVFMFNSEGTMQPLLPAIWKPEPLWTGKQVITALLNH 633

Query: 2931 ITRGRPPFTVKKDGRIPQDYFG-----------------------------------KNS 2857
            ITRG PP TV++D +IP+ +F                                    +  
Sbjct: 634  ITRGSPPVTVERDAKIPRGFFNCKNVEGEDKSGNDGQQKKRKPSKEQATDKDSSKEKEEP 693

Query: 2856 RENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGF 2677
             EN LLI +N  + GVIDKAQFG YGLVHTVQE YGSDTAG LLSV S LFTV+LQMHGF
Sbjct: 694  DENHLLIYRNNLVRGVIDKAQFGDYGLVHTVQEFYGSDTAGKLLSVLSHLFTVYLQMHGF 753

Query: 2676 TCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKN-DHVEPGKLQRETERIIRTK 2500
            TCG+DDLL+ +  D + K  LES + +GE+V+  FI  K+    +P +LQ   E  IR+ 
Sbjct: 754  TCGIDDLLLLESKDAKMKDQLESCEDVGENVYRDFIEVKDVKRKDPVELQLNIENFIRSN 813

Query: 2499 GESAAMSLDRMMSSALNRLTS--EVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQ 2326
            GESA  SLDR M S LN  TS  +V  +L   GL K    NC+ LMTT+GAKG + N  Q
Sbjct: 814  GESALASLDRRMISQLNNKTSNSDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQ 873

Query: 2325 ISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAG 2146
            I+S LGQQELEGKRVP+M+SGKTLPCF PWD ++RAGGFI DRFL+GL PQEYYFHCMAG
Sbjct: 874  ITSYLGQQELEGKRVPQMISGKTLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAG 933

Query: 2145 RDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSF 1966
            R+GLVDTA+KTSRSGYLQRC++K LECLKV YD+TVRDADGSI+QF YGEDG+DVH TSF
Sbjct: 934  REGLVDTAVKTSRSGYLQRCIIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSF 993

Query: 1965 ITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDTL 1786
            I +F+ L  N+++  +K    ++     K + YI DLP AL+ KA+ F+ +L+ K++D  
Sbjct: 994  IQKFESLIANKEMFHKKGRRQMD-----KLNPYIKDLPLALKEKAEKFVHNLALKEKD-- 1046

Query: 1785 HXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLG 1606
                               LAQPGE VGVLA QSVGEPSTQMTLNTFH AGRGEMNVTLG
Sbjct: 1047 -HNFQEDFLKLMEHKYLCSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLG 1105

Query: 1605 IPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYF 1426
            IPRLQEIL  A+  I TPVMTCPL+KGR++++A+ LA KLKK+ VADIIESM+V+ VP+F
Sbjct: 1106 IPRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFF 1165

Query: 1425 VQNQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKIS 1246
            +Q+ Q   I                 + + ED    L++ FVRELED+I  H+L LSKIS
Sbjct: 1166 IQDGQTCRIYKLEMTLHVPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKIS 1225

Query: 1245 TIKIIADKSEHVTRXXXXXXXXXXXXXXKQXXXXXXXXXXXXXXXXXXXXXXXXAQKRKR 1066
             IK     S+                  ++                        A KRK 
Sbjct: 1226 GIKNFTPDSQ-PKASNETDENLPEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKL 1284

Query: 1065 QAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVD--DQS 892
            QA DEMDYEDG D+E+   +   G        ESEID+ E + +    GE   +D  D+ 
Sbjct: 1285 QATDEMDYEDGCDDEVREADLSDGD-------ESEIDEEENEVEIGKDGEIGVIDANDEM 1337

Query: 891  QIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKAHLIKKKTDRAILVDARGLNFEVHFR 712
                 E+               S   + K++K +A ++KK+TDRAI V A+G +FEVHFR
Sbjct: 1338 PGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFR 1397

Query: 711  F-KQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYEGN-------------------- 595
            F   EPHILL+QIAQK A+ VY++ SGK+  C  I  + N                    
Sbjct: 1398 FADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDPENKQSFSSKEK 1457

Query: 594  --IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSY 421
              +PALQT G++F  FW ++D LDVR + SN+IHAMLNTYGVEAAR TI+ E+  VF SY
Sbjct: 1458 KEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSY 1517

Query: 420  GISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVE 241
            GISVNIRHLTLIAD+MT AGGYR +NR G    S SP  KM+FETA++FIVEAA HG+V+
Sbjct: 1518 GISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVD 1577

Query: 240  RLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            RLE+PSAR+ LGLP+ +GTG FD++H ++V
Sbjct: 1578 RLETPSARICLGLPVNVGTGCFDLMHKMEV 1607