BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00009170
         (3117 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron sp...  1144   0.0  
ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron sp...  1140   0.0  
ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron sp...  1140   0.0  
ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron sp...  1140   0.0  
ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron sp...  1023   0.0  
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...  1014   0.0  
ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron sp...  1011   0.0  
ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron sp...  1008   0.0  
ref|XP_008802838.1| PREDICTED: chloroplastic group IIA intron sp...   992   0.0  
ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron sp...   986   0.0  
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   983   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   980   0.0  
ref|XP_010917579.1| PREDICTED: chloroplastic group IIA intron sp...   970   0.0  
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...   963   0.0  
ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron sp...   956   0.0  
ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron sp...   955   0.0  
gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitat...   954   0.0  
gb|KDO45877.1| hypothetical protein CISIN_1g002316mg [Citrus sin...   949   0.0  
ref|XP_009394449.1| PREDICTED: chloroplastic group IIA intron sp...   947   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   947   0.0  

>ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nelumbo nucifera]
            gi|720071686|ref|XP_010278132.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Nelumbo nucifera]
            gi|720071690|ref|XP_010278133.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Nelumbo nucifera]
          Length = 914

 Score = 1144 bits (2960), Expect = 0.0
 Identities = 605/920 (65%), Positives = 706/920 (76%), Gaps = 8/920 (0%)
 Frame = -1

Query: 2907 TCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            +CQ +PT+F+DSFQ+SLSRF G RL  LRY+ S   K+H+FS +   I S   PE+N QK
Sbjct: 6    SCQFYPTSFLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLPEKNQQK 65

Query: 2727 KSNLVAE---NRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNX 2557
             S+   +   +R+    ETPISQ+ SNG F + +W+ +W+ T  QNLP RP+ VLDYRN 
Sbjct: 66   NSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTVLDYRNG 125

Query: 2556 XXXXXXXXXXXXXXXXXXT---MDRIVEKLKRFGYVDDMIERNERVPERGSVEDIFYVEE 2386
                              +   MD+IVEKLKRFGYVDDM ER ERVPE+GSVEDIFYVEE
Sbjct: 126  GDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVPEKGSVEDIFYVEE 185

Query: 2385 GMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELT 2206
            GMLPN+RGGF AESPL +EN   GG G   FPWEKR +  E  RNS R R S+TS+AELT
Sbjct: 186  GMLPNTRGGFSAESPLGIENGL-GGSGEVRFPWEKRSMKEEEERNSFRSR-SRTSLAELT 243

Query: 2205 LPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRL 2026
            LP+SELRRLR+LAV  K + KI GAGVT+A+VDAIHEKWK SE+VRLKCEG   LNMKR+
Sbjct: 244  LPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRM 303

Query: 2025 HEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKATG 1846
            HEILERKTGGLVIWRSGTS+SLYRGV YE+ S +  +K+ Q + + +H+SF I T K   
Sbjct: 304  HEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFEIITAKINR 363

Query: 1845 DSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPL 1666
            D  E SS+  +Q    S+  T EEKK+  S+PEIKYE E+D+LLD LGPRYTDWPG+GPL
Sbjct: 364  DPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPL 423

Query: 1665 PVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLA 1486
            PVDADLLPGVV  YK PFRILPYGVR T+G KE T+LRRLAR++PPHFALGRSRQHQGLA
Sbjct: 424  PVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLA 483

Query: 1485 MAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSP 1306
            MAM KLWERSSIA IALKRGVQLTTSERMAEDIKKLTG T+++RNKDFIVFYRGKNFLSP
Sbjct: 484  MAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSP 543

Query: 1305 DVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKR 1126
            DVTEALLERERLAK LQDEEE+ARL+ASS +IS  E I + GTAGTLEETLEADARWGK+
Sbjct: 544  DVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKK 603

Query: 1125 LDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPE 946
            LDDE R KMMRAAE ARH  LVRKL+ KL LAERKLMKAE  L+KVE  L+P ER +DPE
Sbjct: 604  LDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPE 663

Query: 945  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKN 766
            SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++ A+ F QV+N
Sbjct: 664  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRN 723

Query: 765  VALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRH 586
            +ALALEAESGG+LVSVD+VSKGFAIIV+RGKDY+RP TLRPKNLLTKRKALARSIELQRH
Sbjct: 724  IALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRH 783

Query: 585  EALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLE 406
            EAL KHIS L ++V+ L+SELDQME VKD+GDEELY KL++AYP+          EAYLE
Sbjct: 784  EALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSEDEGDEAYLE 843

Query: 405  TCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHP--ETNFPYDHQNPVQGSDDDTSKFCA 232
            T  S  DN D                 +I++FH   ETNFPYD QN    +D +  +  +
Sbjct: 844  TYDS--DNND------------ADPKDAIQNFHAEIETNFPYDEQNWAGETDSEALQAYS 889

Query: 231  MGPTEPYSQRSEGVQIKETN 172
            +  T     R+   +++++N
Sbjct: 890  LLETNKSCTRTNEARMEDSN 909


>ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X4 [Nelumbo nucifera]
          Length = 880

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 601/886 (67%), Positives = 691/886 (77%), Gaps = 8/886 (0%)
 Frame = -1

Query: 2907 TCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            +CQ +PT+F+DSFQ+SLSRF G RL  LRY+ S   K+H+FS +   I S   PE+N QK
Sbjct: 6    SCQFYPTSFLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLPEKNQQK 65

Query: 2727 KSNLVAE---NRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNX 2557
             S+   +   +R+    ETPISQ+ SNG F + +W+ +W+ T  QNLP RP+ VLDYRN 
Sbjct: 66   NSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTVLDYRNG 125

Query: 2556 XXXXXXXXXXXXXXXXXXT---MDRIVEKLKRFGYVDDMIERNERVPERGSVEDIFYVEE 2386
                              +   MD+IVEKLKRFGYVDDM ER ERVPE+GSVEDIFYVEE
Sbjct: 126  GDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVPEKGSVEDIFYVEE 185

Query: 2385 GMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELT 2206
            GMLPN+RGGF AESPL +EN   GG G   FPWEKR +  E  RNS R R S+TS+AELT
Sbjct: 186  GMLPNTRGGFSAESPLGIENGL-GGSGEVRFPWEKRSMKEEEERNSFRSR-SRTSLAELT 243

Query: 2205 LPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRL 2026
            LP+SELRRLR+LAV  K + KI GAGVT+A+VDAIHEKWK SE+VRLKCEG   LNMKR+
Sbjct: 244  LPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRM 303

Query: 2025 HEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKATG 1846
            HEILERKTGGLVIWRSGTS+SLYRGV YE+ S +  +K+ Q + + +H+SF I T K   
Sbjct: 304  HEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFEIITAKINR 363

Query: 1845 DSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPL 1666
            D  E SS+  +Q    S+  T EEKK+  S+PEIKYE E+D+LLD LGPRYTDWPG+GPL
Sbjct: 364  DPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPL 423

Query: 1665 PVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLA 1486
            PVDADLLPGVV  YK PFRILPYGVR T+G KE T+LRRLAR++PPHFALGRSRQHQGLA
Sbjct: 424  PVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLA 483

Query: 1485 MAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSP 1306
            MAM KLWERSSIA IALKRGVQLTTSERMAEDIKKLTG T+++RNKDFIVFYRGKNFLSP
Sbjct: 484  MAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSP 543

Query: 1305 DVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKR 1126
            DVTEALLERERLAK LQDEEE+ARL+ASS +IS  E I + GTAGTLEETLEADARWGK+
Sbjct: 544  DVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKK 603

Query: 1125 LDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPE 946
            LDDE R KMMRAAE ARH  LVRKL+ KL LAERKLMKAE  L+KVE  L+P ER +DPE
Sbjct: 604  LDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPE 663

Query: 945  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKN 766
            SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++ A+ F QV+N
Sbjct: 664  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRN 723

Query: 765  VALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRH 586
            +ALALEAESGG+LVSVD+VSKGFAIIV+RGKDY+RP TLRPKNLLTKRKALARSIELQRH
Sbjct: 724  IALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRH 783

Query: 585  EALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLE 406
            EAL KHIS L ++V+ L+SELDQME VKD+GDEELY KL++AYP+          EAYLE
Sbjct: 784  EALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSEDEGDEAYLE 843

Query: 405  TCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHP--ETNFPYDHQN 274
            T  S  DN D                 +I++FH   ETNFPYD QN
Sbjct: 844  TYDS--DNND------------ADPKDAIQNFHAEIETNFPYDEQN 875


>ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nelumbo nucifera]
          Length = 896

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 601/886 (67%), Positives = 691/886 (77%), Gaps = 8/886 (0%)
 Frame = -1

Query: 2907 TCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            +CQ +PT+F+DSFQ+SLSRF G RL  LRY+ S   K+H+FS +   I S   PE+N QK
Sbjct: 6    SCQFYPTSFLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLPEKNQQK 65

Query: 2727 KSNLVAE---NRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNX 2557
             S+   +   +R+    ETPISQ+ SNG F + +W+ +W+ T  QNLP RP+ VLDYRN 
Sbjct: 66   NSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTVLDYRNG 125

Query: 2556 XXXXXXXXXXXXXXXXXXT---MDRIVEKLKRFGYVDDMIERNERVPERGSVEDIFYVEE 2386
                              +   MD+IVEKLKRFGYVDDM ER ERVPE+GSVEDIFYVEE
Sbjct: 126  GDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVPEKGSVEDIFYVEE 185

Query: 2385 GMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELT 2206
            GMLPN+RGGF AESPL +EN   GG G   FPWEKR +  E  RNS R R S+TS+AELT
Sbjct: 186  GMLPNTRGGFSAESPLGIENGL-GGSGEVRFPWEKRSMKEEEERNSFRSR-SRTSLAELT 243

Query: 2205 LPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRL 2026
            LP+SELRRLR+LAV  K + KI GAGVT+A+VDAIHEKWK SE+VRLKCEG   LNMKR+
Sbjct: 244  LPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRM 303

Query: 2025 HEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKATG 1846
            HEILERKTGGLVIWRSGTS+SLYRGV YE+ S +  +K+ Q + + +H+SF I T K   
Sbjct: 304  HEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFEIITAKINR 363

Query: 1845 DSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPL 1666
            D  E SS+  +Q    S+  T EEKK+  S+PEIKYE E+D+LLD LGPRYTDWPG+GPL
Sbjct: 364  DPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPL 423

Query: 1665 PVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLA 1486
            PVDADLLPGVV  YK PFRILPYGVR T+G KE T+LRRLAR++PPHFALGRSRQHQGLA
Sbjct: 424  PVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLA 483

Query: 1485 MAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSP 1306
            MAM KLWERSSIA IALKRGVQLTTSERMAEDIKKLTG T+++RNKDFIVFYRGKNFLSP
Sbjct: 484  MAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSP 543

Query: 1305 DVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKR 1126
            DVTEALLERERLAK LQDEEE+ARL+ASS +IS  E I + GTAGTLEETLEADARWGK+
Sbjct: 544  DVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKK 603

Query: 1125 LDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPE 946
            LDDE R KMMRAAE ARH  LVRKL+ KL LAERKLMKAE  L+KVE  L+P ER +DPE
Sbjct: 604  LDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPE 663

Query: 945  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKN 766
            SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++ A+ F QV+N
Sbjct: 664  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRN 723

Query: 765  VALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRH 586
            +ALALEAESGG+LVSVD+VSKGFAIIV+RGKDY+RP TLRPKNLLTKRKALARSIELQRH
Sbjct: 724  IALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRH 783

Query: 585  EALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLE 406
            EAL KHIS L ++V+ L+SELDQME VKD+GDEELY KL++AYP+          EAYLE
Sbjct: 784  EALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSEDEGDEAYLE 843

Query: 405  TCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHP--ETNFPYDHQN 274
            T  S  DN D                 +I++FH   ETNFPYD QN
Sbjct: 844  TYDS--DNND------------ADPKDAIQNFHAEIETNFPYDEQN 875


>ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 919

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 601/886 (67%), Positives = 691/886 (77%), Gaps = 8/886 (0%)
 Frame = -1

Query: 2907 TCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            +CQ +PT+F+DSFQ+SLSRF G RL  LRY+ S   K+H+FS +   I S   PE+N QK
Sbjct: 6    SCQFYPTSFLDSFQSSLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLPEKNQQK 65

Query: 2727 KSNLVAE---NRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNX 2557
             S+   +   +R+    ETPISQ+ SNG F + +W+ +W+ T  QNLP RP+ VLDYRN 
Sbjct: 66   NSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTVLDYRNG 125

Query: 2556 XXXXXXXXXXXXXXXXXXT---MDRIVEKLKRFGYVDDMIERNERVPERGSVEDIFYVEE 2386
                              +   MD+IVEKLKRFGYVDDM ER ERVPE+GSVEDIFYVEE
Sbjct: 126  GDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVPEKGSVEDIFYVEE 185

Query: 2385 GMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELT 2206
            GMLPN+RGGF AESPL +EN   GG G   FPWEKR +  E  RNS R R S+TS+AELT
Sbjct: 186  GMLPNTRGGFSAESPLGIENGL-GGSGEVRFPWEKRSMKEEEERNSFRSR-SRTSLAELT 243

Query: 2205 LPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRL 2026
            LP+SELRRLR+LAV  K + KI GAGVT+A+VDAIHEKWK SE+VRLKCEG   LNMKR+
Sbjct: 244  LPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRM 303

Query: 2025 HEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKATG 1846
            HEILERKTGGLVIWRSGTS+SLYRGV YE+ S +  +K+ Q + + +H+SF I T K   
Sbjct: 304  HEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNSFEIITAKINR 363

Query: 1845 DSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPL 1666
            D  E SS+  +Q    S+  T EEKK+  S+PEIKYE E+D+LLD LGPRYTDWPG+GPL
Sbjct: 364  DPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPL 423

Query: 1665 PVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLA 1486
            PVDADLLPGVV  YK PFRILPYGVR T+G KE T+LRRLAR++PPHFALGRSRQHQGLA
Sbjct: 424  PVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLA 483

Query: 1485 MAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSP 1306
            MAM KLWERSSIA IALKRGVQLTTSERMAEDIKKLTG T+++RNKDFIVFYRGKNFLSP
Sbjct: 484  MAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSP 543

Query: 1305 DVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKR 1126
            DVTEALLERERLAK LQDEEE+ARL+ASS +IS  E I + GTAGTLEETLEADARWGK+
Sbjct: 544  DVTEALLERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKK 603

Query: 1125 LDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPE 946
            LDDE R KMMRAAE ARH  LVRKL+ KL LAERKLMKAE  L+KVE  L+P ER +DPE
Sbjct: 604  LDDEDRKKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPE 663

Query: 945  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKN 766
            SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++ A+ F QV+N
Sbjct: 664  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRN 723

Query: 765  VALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRH 586
            +ALALEAESGG+LVSVD+VSKGFAIIV+RGKDY+RP TLRPKNLLTKRKALARSIELQRH
Sbjct: 724  IALALEAESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRH 783

Query: 585  EALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLE 406
            EAL KHIS L ++V+ L+SELDQME VKD+GDEELY KL++AYP+          EAYLE
Sbjct: 784  EALYKHISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPTEDEDSEDEGDEAYLE 843

Query: 405  TCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHP--ETNFPYDHQN 274
            T  S  DN D                 +I++FH   ETNFPYD QN
Sbjct: 844  TYDS--DNND------------ADPKDAIQNFHAEIETNFPYDEQN 875


>ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 899

 Score = 1023 bits (2646), Expect = 0.0
 Identities = 546/884 (61%), Positives = 655/884 (74%), Gaps = 12/884 (1%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKS 2722
            Q++PT+  DSFQ+S S+F G  +   R   S P KKH F +   TISS   PE+NP +KS
Sbjct: 8    QLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPEQNPLRKS 67

Query: 2721 NLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXXXX 2542
            N V +N+       PISQ     +F + +W+D+W+ +   N PK P+AVLDY++      
Sbjct: 68   NFVRKNQ-------PISQYKPKKNFSSSSWIDKWNESHKHNCPKPPRAVLDYQSSESGNL 120

Query: 2541 XXXXXXXXXXXXXT------MDRIVEKLKRFGYVDDMIERN----ERVPERGSVEDIFYV 2392
                                M++IVEKLK+FGYVDD  E      +RV E+GSVEDIFYV
Sbjct: 121  SGSGYAEGDSGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDRVMEKGSVEDIFYV 180

Query: 2391 EEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAE 2212
            EEG LPNSRGGF  ESPL +EN + GGDG+  FPWEK     +    SVR R+S+TS+AE
Sbjct: 181  EEGKLPNSRGGFSEESPLGIENVF-GGDGKVRFPWEKPKEEEKQEEGSVR-RKSRTSLAE 238

Query: 2211 LTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMK 2032
            LTLP+SELRRL +L    K + +IGG GVT+A+V+ IHE+WK SE+VRLK EGPP LNMK
Sbjct: 239  LTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLKIEGPPALNMK 298

Query: 2031 RLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDS--FSIATE 1858
            R+HEILERKTGGLVIWRSGTS+SLYRGV YE+PS   VK   Q+  K +  S  F    +
Sbjct: 299  RMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPS---VKLNKQIYKKNDTSSAPFPTVAD 355

Query: 1857 KATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPG 1678
            K+ GD  E +S+  ++     LE+T++EK++   + E+KYE E+DKLLD LGPR+ DWPG
Sbjct: 356  KSVGDFAELASYSNVKTPKEKLENTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPG 415

Query: 1677 SGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQH 1498
              PLPVDAD+LPG+VPGY+ PFR+LPYGVR T+G KE TSLRRLARVLPPHFALGRSRQ 
Sbjct: 416  CDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQL 475

Query: 1497 QGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKN 1318
            QGLA+AMAKLWE+S IA IALKRGVQLTTSERMAEDIK+LTGG +++RNKDF+VFYRGKN
Sbjct: 476  QGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFYRGKN 535

Query: 1317 FLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADAR 1138
            FLSPDVTEALLERERLAK LQDEEE+ARL+AS+ +I + E  +  GT GTL ETL+ADA+
Sbjct: 536  FLSPDVTEALLERERLAKSLQDEEEQARLRASAMIIPNVEVAQHFGTTGTLGETLDADAK 595

Query: 1137 WGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERS 958
            WGKRLD E   K+MR A+  RHA LVRKL+ KL  AERKLM+AE  L+KVE  L+P+++ 
Sbjct: 596  WGKRLDKE---KVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEESLKPSKQQ 652

Query: 957  SDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFS 778
            +DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++NA+ F 
Sbjct: 653  ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKTFE 712

Query: 777  QVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIE 598
            QVKN+ALALEAESGGVLVSVDKVSK FAIIVYRGKDY RP TLRPKNLLTKRKALARSIE
Sbjct: 713  QVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIE 772

Query: 597  LQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXE 418
            LQR EAL KHIS +Q KV  L+ E++QM+SVKD+GDE LY KL+S+YP+          +
Sbjct: 773  LQRQEALLKHISAVQSKVDTLRCEIEQMDSVKDQGDEALYNKLDSSYPT--DDEDSEEGD 830

Query: 417  AYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPY 286
            AYLET +S  D ED   Y             SI + H ETNFPY
Sbjct: 831  AYLETYNSENDGEDEGNY-------------SICNPHLETNFPY 861


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 546/910 (60%), Positives = 660/910 (72%), Gaps = 12/910 (1%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKS 2722
            Q++PT+  DSFQ+S S+F G  +   R   S P KKH F +   TISS   PE+NP +KS
Sbjct: 8    QLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPEQNPLRKS 67

Query: 2721 NLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXXXX 2542
            N V +N+       PISQ     +F + +W+D+W+ +   N PK P+AVLDY++      
Sbjct: 68   NFVRKNQ-------PISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGNL 120

Query: 2541 XXXXXXXXXXXXXT------MDRIVEKLKRFGYVDDMIERN----ERVPERGSVEDIFYV 2392
                                M++IVEKLK+FGYVDD  E      + V E+GSVEDIFY+
Sbjct: 121  SGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDSVIEKGSVEDIFYI 180

Query: 2391 EEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAE 2212
            EEGMLPNSRGGF  ESPL +EN + GGDG+  FPWEK     +    SVR R+S+TS+AE
Sbjct: 181  EEGMLPNSRGGFSEESPLGIENVF-GGDGKVRFPWEKPKEEEKQEEGSVR-RKSRTSLAE 238

Query: 2211 LTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMK 2032
            LTLP+SELRRL +L    K + +IGG GVT+A+V+ IHE+WK SE+VRLK EGPP LNMK
Sbjct: 239  LTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLKIEGPPALNMK 298

Query: 2031 RLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIAT--E 1858
            R+HEILERKTGGLVIWRSGTS+SLYRGV YE+PS   VK   ++  K +  S  + T  +
Sbjct: 299  RMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPS---VKLNKRIYKKNDISSAPLPTVAD 355

Query: 1857 KATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPG 1678
            K+ GD  E +S+  ++      E+T++EK++   + E+KYE E+DKLLD LGPR+ DWPG
Sbjct: 356  KSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPG 415

Query: 1677 SGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQH 1498
              PLPVDAD+LPG+VPGY+ PFR+LPYGVR T+G KE TSLRRLARVLPPHFALGRSRQ 
Sbjct: 416  CDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQL 475

Query: 1497 QGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKN 1318
            QGLA+AMAKLWE+S IA IALKRGVQLTTSERMAEDIK+LTGG +++RNKDF+VFYRGKN
Sbjct: 476  QGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFYRGKN 535

Query: 1317 FLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADAR 1138
            FLSPDVTEALLERERLAK LQDEEE+ARL+AS+  I + E  +  GTAGTL ETL+ADA+
Sbjct: 536  FLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTLGETLDADAK 595

Query: 1137 WGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERS 958
            WGKRLD E   K+MR A+  RHA LVRKL+ KL  AERKLM+AE  L+KVE  L+P+++ 
Sbjct: 596  WGKRLDKE---KVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEESLKPSKQQ 652

Query: 957  SDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFS 778
            +DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++NA+ F 
Sbjct: 653  ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKTFE 712

Query: 777  QVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIE 598
            QVKN+ALALEAESGGVLVSVDKVSK FAIIVYRGKDY RP TLRPKNLLTKRKALARSIE
Sbjct: 713  QVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIE 772

Query: 597  LQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXE 418
            LQR EAL KHIS +Q KV  L+SE++QM+SVKD+GDE LY KL+S+YP+          +
Sbjct: 773  LQRQEALLKHISAVQSKVDTLRSEIEQMDSVKDQGDEALYNKLDSSYPT--DDEDSEEVD 830

Query: 417  AYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQNPVQGSDDDTSKF 238
            AYLET +   + ED   Y             SI +   ETNFPY      Q   +     
Sbjct: 831  AYLETYNRENEGEDEGNY-------------SICNPQLETNFPYFENQDSQTELEVPQHH 877

Query: 237  CAMGPTEPYS 208
                PT  Y+
Sbjct: 878  LHAVPTNSYA 887


>ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Malus domestica]
          Length = 894

 Score = 1011 bits (2615), Expect = 0.0
 Identities = 541/882 (61%), Positives = 651/882 (73%), Gaps = 6/882 (0%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSH--SNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            Q++PT   DSFQ SLS+F+G  +QF RY H  S P  KH F +    ISS   P++NP +
Sbjct: 8    QLYPTNLFDSFQRSLSKFNGPHIQFFRYGHGSSTPFNKHTFYATHSIISS---PDQNPVR 64

Query: 2727 KSNLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXX 2548
            KSN V  NR        I Q     +    +W+D+W+ +  +N  K P+AVLDY++    
Sbjct: 65   KSNFVGRNRS-------IYQYKPXRNLCTSSWIDKWNESHKRNRLKPPQAVLDYQSSESG 117

Query: 2547 XXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMIE----RNERVPERGSVEDIFYVEEGM 2380
                            M +IVEKL +FGYVDD  E      ERV E+GSVEDIFYVEEGM
Sbjct: 118  NLSGSGNGGGST----MQKIVEKLTKFGYVDDSXEGKGEARERVIEKGSVEDIFYVEEGM 173

Query: 2379 LPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTLP 2200
            LPNSRGGF AESPL +EN + G DG+  FPWEK     +    SVR R+S+TSVAELTLP
Sbjct: 174  LPNSRGGFSAESPLGIENVF-GSDGKVRFPWEKPAEEEKQDZGSVR-RKSRTSVAELTLP 231

Query: 2199 DSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLHE 2020
            +SELRRLR+L    K + KIGGAGVT+A+VD IHE+WK SE+VRLK EGPP LNMKR+HE
Sbjct: 232  ESELRRLRNLTFQKKHKTKIGGAGVTQAVVDMIHERWKTSEIVRLKVEGPPALNMKRMHE 291

Query: 2019 ILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKATGDS 1840
            ILERKTGGLV+WRSGTS+SLYRGV YE+PS Q  K+  +     +  SF    +K+ GD 
Sbjct: 292  ILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRIYKKKEISSSTSFPNVADKSLGDF 351

Query: 1839 IEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPLPV 1660
            +E +S+  +       E T+ EKK+ + +PE+KYE E+DKLLD LGPR+ DWPG  PLPV
Sbjct: 352  VELASYGNVNTPQEKPESTSLEKKDTDQLPEVKYEDEVDKLLDSLGPRFKDWPGCDPLPV 411

Query: 1659 DADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLAMA 1480
            DAD+LPG+VPGY+ PFR+LPYGV  ++G +E TSLRRLARVLPPHFALGRSRQ QGLA+A
Sbjct: 412  DADMLPGLVPGYEPPFRVLPYGVXSSLGLQEATSLRRLARVLPPHFALGRSRQLQGLAVA 471

Query: 1479 MAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSPDV 1300
            MAKLWERS IA IALKRGVQLTTSERMAEDIK+LTGG L++RNKDF+VFYRGKNFLSP+V
Sbjct: 472  MAKLWERSLIAKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEV 531

Query: 1299 TEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKRLD 1120
            TEALLERERLAK LQDEEE+ARL+AS+ +I + E+ +  GTAGTL ETL+ADA+WGK +D
Sbjct: 532  TEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLAETLDADAKWGKMMD 591

Query: 1119 DEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPESI 940
            + ++ K+M+ A+  RHA+LVRKL+ KL  AERKLMKAE  L+KVE  L+P+   +DP+SI
Sbjct: 592  NHHKKKVMQEADILRHANLVRKLERKLAFAERKLMKAEQALSKVEECLKPSTLQADPDSI 651

Query: 939  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKNVA 760
            TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++NA++F QVK +A
Sbjct: 652  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQVKKIA 711

Query: 759  LALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRHEA 580
            LALEAESGGVLVSVDKVSK FAIIVYRGKDY RP TLRPKNLLTKRKALARSIE+QR EA
Sbjct: 712  LALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEIQRQEA 771

Query: 579  LCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLETC 400
            L KHIS +Q KV  L+SE++QM+ VK+ GDE LY KL+S+YP+          + YLET 
Sbjct: 772  LLKHISXVQSKVDTLRSEIEQMDVVKERGDEVLYNKLDSSYPT-DDDDDSEEEDVYLET- 829

Query: 399  HSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
            +S  DN +  G            N S    H ETNFPY  QN
Sbjct: 830  YSXEDNGEDEG------------NYSTHDPHLETNFPYHIQN 859


>ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Malus domestica]
          Length = 882

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 534/882 (60%), Positives = 653/882 (74%), Gaps = 6/882 (0%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKS 2722
            Q++PT+  DSFQ+SLS+F+   +QF RY  S P K H F +    ISS   P+ NP +KS
Sbjct: 8    QLYPTSLFDSFQSSLSKFNSAHIQFFRYGSSIPFKNHTFYTTHCIISSPLNPDPNPMRKS 67

Query: 2721 NLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXXXX 2542
            N V  NR       P+ Q     +  + +W+++W+ +   N PK P+AVLDY++      
Sbjct: 68   NFVGRNR-------PVYQCKLKRNLCSSSWINKWNESHKHNRPKPPRAVLDYQSSEGGNG 120

Query: 2541 XXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMI----ERNERVPERGSVEDIFYVEEGMLP 2374
                          M++IVEKLK+FGYVDD      E   RV E+GSVEDIFYVEEGMLP
Sbjct: 121  SGNGGGST------MEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGSVEDIFYVEEGMLP 174

Query: 2373 NSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTLPDS 2194
            NSRG F A+SPL VEN + G DG+  FPWEK     +    SVR R+S+TSVAELTLP+S
Sbjct: 175  NSRGRFSADSPLGVENVF-GSDGKVXFPWEKPAEEEKQEEGSVR-RKSRTSVAELTLPES 232

Query: 2193 ELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLHEIL 2014
            ELRRLR+L    K + +IGGAGVT+A+VD IHE+WK SE+VRLK EGPP LNMKR+HEIL
Sbjct: 233  ELRRLRNLTFQKKHKTRIGGAGVTQAVVDMIHERWKTSEIVRLKVEGPPALNMKRMHEIL 292

Query: 2013 ERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIAT--EKATGDS 1840
            ERKTGGLV+WRSGTS+SLYRGV YE+PS Q  K+   +  K +  S S+ T  +K  GD 
Sbjct: 293  ERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKR---IYKKNDSSSASLPTVADKXVGDF 349

Query: 1839 IEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPLPV 1660
            +E +S+  +      LE T  EKK+   +PE+KYE E+D+LLD LGPR+ DWPG  PLPV
Sbjct: 350  VEIASYXNVNTPQEKLESTFLEKKDTEQLPEVKYEDEVDELLDXLGPRFKDWPGCDPLPV 409

Query: 1659 DADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLAMA 1480
            DAD+LPG+VPGY+ PFR+LPYGVR ++G +E TSLRRLARVLPPHFALGRSRQ QGLA+A
Sbjct: 410  DADMLPGIVPGYEPPFRVLPYGVRSSLGLQEATSLRRLARVLPPHFALGRSRQLQGLAVA 469

Query: 1479 MAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSPDV 1300
            MAKLWERS I  IALKRGVQLTTSERMAEDIK+LTGG L++RNKDF+VFYRGKNFLSP+V
Sbjct: 470  MAKLWERSLIXKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEV 529

Query: 1299 TEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKRLD 1120
            TEALLERERLAK LQDEEE+ARL+AS+ +I + E+ +  GTAGTL ETL+ADA+WGKR+D
Sbjct: 530  TEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLGETLDADAKWGKRMD 589

Query: 1119 DEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPESI 940
            + ++ K+M+ A+  RH++L RKL+ KL  AERKLMKAE  L+KVE  L+P+   +DP+SI
Sbjct: 590  NHHKKKVMQEADILRHSNLXRKLERKLAFAERKLMKAEQALSKVEECLKPSMXQADPDSI 649

Query: 939  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKNVA 760
            TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++NA++F QVK +A
Sbjct: 650  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQVKKIA 709

Query: 759  LALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRHEA 580
            LALEAESGGVLVSVDKVSK FAIIVYRGKDY RP TLRPKNLLTKRKALARSIE+QR EA
Sbjct: 710  LALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEIQRQEA 769

Query: 579  LCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLETC 400
            L KHIS +Q KV  L+SE++QM++VK+ GDE LY+KL+S+YP+          + YLET 
Sbjct: 770  LLKHISVVQSKVDTLRSEIEQMDAVKEHGDEVLYDKLDSSYPT-DDDDDSEEEDVYLETY 828

Query: 399  HSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
             +  D ED   Y             S    H E+ FP++ QN
Sbjct: 829  SAENDGEDEGNY-------------STHDPHLESIFPFNIQN 857


>ref|XP_008802838.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Phoenix dactylifera]
          Length = 895

 Score =  992 bits (2565), Expect = 0.0
 Identities = 540/859 (62%), Positives = 634/859 (73%), Gaps = 5/859 (0%)
 Frame = -1

Query: 2916 VSSTCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSN-PHKKHHFSSNLRTISSAPFPER 2740
            ++ T Q+HP    DS  ASLSR    RL   R S S  P KK  FS+N          ++
Sbjct: 3    LAPTLQLHPAPIFDSLHASLSRLQSPRLLLFRSSSSTAPSKKLRFSAN-------SIHDQ 55

Query: 2739 NPQKKSNLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRN 2560
             P  KS+        GP   P  + P+        W+  W+ ++    PKRP+A LDYR 
Sbjct: 56   APDGKSSPYP-----GPGHRP-RRLPAGDLSSRPTWIQSWNQSRLLTSPKRPRAFLDYRE 109

Query: 2559 XXXXXXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMIERNER-VPERGSVEDIFYVEEG 2383
                                M++IVEKLK+FGY+D   ER E  +PE+GSVEDIFY E+G
Sbjct: 110  GISSDDDVVGTSRSTGSST-MEKIVEKLKKFGYIDVSDERKESPLPEKGSVEDIFYAEDG 168

Query: 2382 MLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLN--GEAVRNSVRMRRSKTSVAEL 2209
            +LP+SRGG   +    V            FPWEK   N  G+   +S+R RRSKTS+AEL
Sbjct: 169  ILPDSRGGLSLDLNKEVR-----------FPWEKPLQNKEGDGGGSSMRKRRSKTSLAEL 217

Query: 2208 TLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKR 2029
            TLP+ ELRRLRH+AV +KS+ KI GAGVTK IVD IHE+WK +EVVRLKCEG P LNMKR
Sbjct: 218  TLPEGELRRLRHMAVRIKSKTKIKGAGVTKDIVDLIHEQWKTTEVVRLKCEGAPALNMKR 277

Query: 2028 LHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKAT 1849
             HEILERKTGGLVIWRSGTS+SLYRGVGYE+P  Q  KK+ Q V +   D+F+  T   T
Sbjct: 278  THEILERKTGGLVIWRSGTSISLYRGVGYEIP--QPEKKQYQSVQRSAVDTFNKDTYYPT 335

Query: 1848 GDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGP 1669
            G SIE      +Q  H  L  + E+KK+     EIKYE EIDKLLDGLGPRYTDWPGSGP
Sbjct: 336  GVSIENGRGNNIQDLHEDLTASLEKKKDTEPDAEIKYEHEIDKLLDGLGPRYTDWPGSGP 395

Query: 1668 LPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGL 1489
            LPVDADLLPGV+PGYK PFRILPYGVR T+G KE T+LRRLAR+LPPHFALGRSRQHQGL
Sbjct: 396  LPVDADLLPGVIPGYKPPFRILPYGVRRTLGLKEGTALRRLARLLPPHFALGRSRQHQGL 455

Query: 1488 AMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLS 1309
            A AM KLWE+SSIA IALKRGVQLTTSERMAE+IKKLTGGT+++ NKD++VFYRGK+FL+
Sbjct: 456  AAAMVKLWEKSSIAKIALKRGVQLTTSERMAEEIKKLTGGTILSSNKDYLVFYRGKDFLA 515

Query: 1308 PDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGK 1129
            P+VTEALLERE LAK LQDEEE+ARL+ASSS++S+FE   +PGTAGTL ETLEADARWG 
Sbjct: 516  PEVTEALLERETLAKTLQDEEEQARLRASSSVVSNFEIADEPGTAGTLGETLEADARWGN 575

Query: 1128 RLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDP 949
            RLD+++  KMMRAAE ARHADLVRKL+ +L LAER+LMKAE  LAKVE  L+PAE + DP
Sbjct: 576  RLDEDHMEKMMRAAEMARHADLVRKLERRLSLAERRLMKAEKALAKVEESLKPAEHTVDP 635

Query: 948  ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVK 769
            ESIT+EERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVKVI+  + F Q K
Sbjct: 636  ESITEEERFMFRKLGLRMKAFLLLGRRGVFAGTVENMHLHWKYRELVKVIVKTKTFEQAK 695

Query: 768  NVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQR 589
             +AL+LE+ESGGVLVSVDKVSKGFAIIVYRGKDY+RP TLRPKNLLTKRKALARSIELQR
Sbjct: 696  YIALSLESESGGVLVSVDKVSKGFAIIVYRGKDYERPSTLRPKNLLTKRKALARSIELQR 755

Query: 588  HEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYL 409
            HEAL +HISNLQ++V+ L+SEL QM++VKD+GDEELY KL+SAY +          EAYL
Sbjct: 756  HEALSRHISNLQKRVEQLRSELVQMDNVKDQGDEELYTKLDSAYSTEDEDTEDDDDEAYL 815

Query: 408  ETCHSG-ADNEDHYGYISS 355
             T ++    + D YG + +
Sbjct: 816  HTFNTAVVIDGDEYGRVEN 834


>ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Malus domestica]
          Length = 864

 Score =  986 bits (2550), Expect = 0.0
 Identities = 526/882 (59%), Positives = 644/882 (73%), Gaps = 6/882 (0%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKS 2722
            Q++PT+  DSFQ+SLS+F+   +QF RY  S P K H F +    ISS   P+ NP +  
Sbjct: 8    QLYPTSLFDSFQSSLSKFNSAHIQFFRYGSSIPFKNHTFYTTHCIISSPLNPDPNPMR-- 65

Query: 2721 NLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXXXX 2542
                                   +  + +W+++W+ +   N PK P+AVLDY++      
Sbjct: 66   -----------------------NLCSSSWINKWNESHKHNRPKPPRAVLDYQSSEGGNG 102

Query: 2541 XXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMI----ERNERVPERGSVEDIFYVEEGMLP 2374
                          M++IVEKLK+FGYVDD      E   RV E+GSVEDIFYVEEGMLP
Sbjct: 103  SGNGGGST------MEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGSVEDIFYVEEGMLP 156

Query: 2373 NSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTLPDS 2194
            NSRG F A+SPL VEN + G DG+  FPWEK     +    SVR R+S+TSVAELTLP+S
Sbjct: 157  NSRGRFSADSPLGVENVF-GSDGKVXFPWEKPAEEEKQEEGSVR-RKSRTSVAELTLPES 214

Query: 2193 ELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLHEIL 2014
            ELRRLR+L    K + +IGGAGVT+A+VD IHE+WK SE+VRLK EGPP LNMKR+HEIL
Sbjct: 215  ELRRLRNLTFQKKHKTRIGGAGVTQAVVDMIHERWKTSEIVRLKVEGPPALNMKRMHEIL 274

Query: 2013 ERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIAT--EKATGDS 1840
            ERKTGGLV+WRSGTS+SLYRGV YE+PS Q  K+   +  K +  S S+ T  +K  GD 
Sbjct: 275  ERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKR---IYKKNDSSSASLPTVADKXVGDF 331

Query: 1839 IEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPLPV 1660
            +E +S+  +      LE T  EKK+   +PE+KYE E+D+LLD LGPR+ DWPG  PLPV
Sbjct: 332  VEIASYXNVNTPQEKLESTFLEKKDTEQLPEVKYEDEVDELLDXLGPRFKDWPGCDPLPV 391

Query: 1659 DADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLAMA 1480
            DAD+LPG+VPGY+ PFR+LPYGVR ++G +E TSLRRLARVLPPHFALGRSRQ QGLA+A
Sbjct: 392  DADMLPGIVPGYEPPFRVLPYGVRSSLGLQEATSLRRLARVLPPHFALGRSRQLQGLAVA 451

Query: 1479 MAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSPDV 1300
            MAKLWERS I  IALKRGVQLTTSERMAEDIK+LTGG L++RNKDF+VFYRGKNFLSP+V
Sbjct: 452  MAKLWERSLIXKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEV 511

Query: 1299 TEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKRLD 1120
            TEALLERERLAK LQDEEE+ARL+AS+ +I + E+ +  GTAGTL ETL+ADA+WGKR+D
Sbjct: 512  TEALLERERLAKSLQDEEEQARLRASAMVIPNVEQAQHFGTAGTLGETLDADAKWGKRMD 571

Query: 1119 DEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPESI 940
            + ++ K+M+ A+  RH++L RKL+ KL  AERKLMKAE  L+KVE  L+P+   +DP+SI
Sbjct: 572  NHHKKKVMQEADILRHSNLXRKLERKLAFAERKLMKAEQALSKVEECLKPSMXQADPDSI 631

Query: 939  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKNVA 760
            TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++NA++F QVK +A
Sbjct: 632  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQVKKIA 691

Query: 759  LALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRHEA 580
            LALEAESGGVLVSVDKVSK FAIIVYRGKDY RP TLRPKNLLTKRKALARSIE+QR EA
Sbjct: 692  LALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEIQRQEA 751

Query: 579  LCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLETC 400
            L KHIS +Q KV  L+SE++QM++VK+ GDE LY+KL+S+YP+          + YLET 
Sbjct: 752  LLKHISVVQSKVDTLRSEIEQMDAVKEHGDEVLYDKLDSSYPT-DDDDDSEEEDVYLETY 810

Query: 399  HSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
             +  D ED   Y             S    H E+ FP++ QN
Sbjct: 811  SAENDGEDEGNY-------------STHDPHLESIFPFNIQN 839


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  983 bits (2542), Expect = 0.0
 Identities = 541/898 (60%), Positives = 651/898 (72%), Gaps = 13/898 (1%)
 Frame = -1

Query: 2901 QIHPT--AFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            Q +PT  +F+DSF ++       RLQF RY  SN  + H       TI+S      NPQ+
Sbjct: 8    QFYPTTTSFLDSFHST-------RLQFFRYGSSNRFRTHSSYVARNTIASN---STNPQR 57

Query: 2727 KSNLVAENRKNGPLETPISQTPSNG-SFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXX 2551
            KSN+V  N       TP+SQ  S G S   GNW+D+W+G   ++ PK  + V++YRN   
Sbjct: 58   KSNIVFTN-------TPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRNSET 110

Query: 2550 XXXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMIERNERVPER----GSVEDIFYVEEG 2383
                             M++IVEKLK+FGY+DD+ E  E V ER    GS+EDIFY+EEG
Sbjct: 111  VSRSDGGSGGGST----MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEG 166

Query: 2382 MLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTL 2203
            +LPN +GGF  +SPL VEN    G+G   FPWE+  +   +VR      +S+TS+AELTL
Sbjct: 167  ILPNPQGGFSLDSPLGVENK-GDGNGEVRFPWERPKVEEGSVRI-----KSRTSLAELTL 220

Query: 2202 PDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLH 2023
            P+SELRRLR+L +  K++ KIGG GVT+A+VD I EKWK SE+V+LKCEG   LNM+R+H
Sbjct: 221  PESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIH 280

Query: 2022 EILERKTGGLVIWRSGTSVSLYRGVGYELPSA--QSVKKKSQLVPKK----NHDSFSIAT 1861
            EILERKTGGLVIWRSGTSVSLYRGV YE+P    + V KK++           +SF+I++
Sbjct: 281  EILERKTGGLVIWRSGTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISS 340

Query: 1860 EKATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWP 1681
             K +G++    S+  + A+ A+L  T  E K+  S  E+KYE EIDKLLDGLGPRYTDWP
Sbjct: 341  NKTSGNAPAVGSNQNVHASQATLNITDGENKDTES--EVKYEDEIDKLLDGLGPRYTDWP 398

Query: 1680 GSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQ 1501
            G  PLP+DADLLPG + GY+ PFRILPYGVR ++G KE T+LRRLARVLPPHFALGRSRQ
Sbjct: 399  GCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQ 458

Query: 1500 HQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGK 1321
             +GLAMAM KLWERSSIA +ALKRGVQLTTSERMAEDIKKLTGG L++RNKDF+VFYRGK
Sbjct: 459  LEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGK 518

Query: 1320 NFLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADA 1141
            NFLS DVTEALLERERLAK LQDEEE+ARL+AS+ +       +Q G+AGTL ETLEADA
Sbjct: 519  NFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADA 578

Query: 1140 RWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAER 961
            RWGKRLDD  + KM++ AE ARHA+LVRKL+ +L LAERKLMKAE+ L+KVE  L+PA R
Sbjct: 579  RWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANR 638

Query: 960  SSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNF 781
             +DPESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVK+I+ A+ F
Sbjct: 639  PADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTF 698

Query: 780  SQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSI 601
             QVK  ALALE+ESGGVLVSVDKVSKGFAI+V+RGKDYQRP TLRPKNLLTKRKALARSI
Sbjct: 699  DQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSI 758

Query: 600  ELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXX 421
            ELQR EAL  HIS LQ+ V+ L+SE++QM+ VKD GDEELY+KL+SAY +          
Sbjct: 759  ELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYATEDEHTEEEGD 818

Query: 420  EAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQNPVQGSDDDT 247
            EAYLET     D E                + SI + H ETNFPYD    +QG + +T
Sbjct: 819  EAYLETYADENDGEHE-------------SDNSIHNHHIETNFPYD----IQGEEFET 859


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  980 bits (2534), Expect = 0.0
 Identities = 538/889 (60%), Positives = 646/889 (72%), Gaps = 13/889 (1%)
 Frame = -1

Query: 2901 QIHPT--AFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQK 2728
            Q +PT  +F+DSF ++       RLQF RY  SN  + H       TI+S      NPQ+
Sbjct: 8    QFYPTTTSFLDSFHST-------RLQFFRYGSSNRFRTHSSYVTRNTIASN---STNPQR 57

Query: 2727 KSNLVAENRKNGPLETPISQTPSNG-SFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXX 2551
            KSN+V  N       TP+SQ  S G S   GNW+D+W+G   ++ PK  + V++YRN   
Sbjct: 58   KSNIVFTN-------TPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNSET 110

Query: 2550 XXXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMIERNERVPER----GSVEDIFYVEEG 2383
                             M++IVEKLK+FGY+DD+ E  E V ER    GS+EDIFY+EEG
Sbjct: 111  VSRSDGGSGGGST----MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEG 166

Query: 2382 MLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTL 2203
            +LPN +GGF  +SPL VEN    G+G   FPWE+  +   +VR      +S+TS+AELTL
Sbjct: 167  ILPNPQGGFSLDSPLGVENK-GDGNGEVRFPWERPKVEEGSVRI-----KSRTSLAELTL 220

Query: 2202 PDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLH 2023
            P+SELRRLR+L +  K++ KIGG GVT+A+VD I EKWK SE+V+LKCEG   LNM+R+H
Sbjct: 221  PESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIH 280

Query: 2022 EILERKTGGLVIWRSGTSVSLYRGVGYELPSA--QSVKKKSQLVPKK----NHDSFSIAT 1861
            EILERKTGGLVIWRSGTSVSLYRGV YE+P    + V KK++           +SF+I++
Sbjct: 281  EILERKTGGLVIWRSGTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISS 340

Query: 1860 EKATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWP 1681
             K +G++    S+  + A+ A+L  T  E K+  S  E+KYE EIDKLLDGLGPRYTDWP
Sbjct: 341  NKTSGNAPAVGSNQNVHASQATLXITDGENKDTES--EVKYEDEIDKLLDGLGPRYTDWP 398

Query: 1680 GSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQ 1501
               PLP+DADLLPG + GY+ PFRILPYGVR ++G KE T+LRRLARVLPPHFALGRSRQ
Sbjct: 399  XCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQ 458

Query: 1500 HQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGK 1321
             +GLAMAM KLWERSSIA +ALKRGVQLTTSERMAEDIKKLTGG L++RNKDF+VFYRGK
Sbjct: 459  LEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGK 518

Query: 1320 NFLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADA 1141
            NFLS DVTEALLERERLAK LQDEEE+ARL+AS+ +       +Q G+AGTL ETLEADA
Sbjct: 519  NFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADA 578

Query: 1140 RWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAER 961
            RWGKRLDD  + KM++ AE ARHA+LVRKL+ +L LAERKLMKAE+ L+KVE  L+PA R
Sbjct: 579  RWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANR 638

Query: 960  SSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNF 781
             +DPESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVK+I+ A+ F
Sbjct: 639  PADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTF 698

Query: 780  SQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSI 601
             QVK  ALALE+ESGGVLVSVDKVSKGFAI+V+RGKDYQRP TLRPKNLLTKRKALARSI
Sbjct: 699  DQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSI 758

Query: 600  ELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXX 421
            ELQR EAL  HIS LQ+ V+ L+SE++QM+ VKD GDEELY+KL+SAY +          
Sbjct: 759  ELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYATEDEHTEEEGD 818

Query: 420  EAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
            EAYLET     D E                + SI + H ETNFPYD Q+
Sbjct: 819  EAYLETYADENDGEHE-------------SDNSIHNHHIETNFPYDIQD 854


>ref|XP_010917579.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Elaeis guineensis]
          Length = 883

 Score =  970 bits (2507), Expect = 0.0
 Identities = 527/848 (62%), Positives = 620/848 (73%), Gaps = 4/848 (0%)
 Frame = -1

Query: 2916 VSSTCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSN-PHKKHHFSSNLRTISSAPFPER 2740
            ++ T Q+HP    DS  ASLSR    RL   R S S  P K   FS+N      AP  + 
Sbjct: 3    LAPTLQLHPAPLFDSLHASLSRLQSPRLLLFRCSSSTAPPKNLRFSAN-SVHHQAPAAKS 61

Query: 2739 NPQKKSNLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRN 2560
            +P   S+       + P   P     S  +     W+  W  ++F   PKRP+AVLDYR 
Sbjct: 62   SPFSGSS-------HRPRRLPAEDLSSRRT-----WIKSWHPSRFLTRPKRPRAVLDYRE 109

Query: 2559 XXXXXXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMIERNER-VPERGSVEDIFYVEEG 2383
                                M++IVEKLK+FGY+DD  ER E  +PE+GSVEDIFY E+G
Sbjct: 110  GISSDDDVVGTSRSTGSST-MEKIVEKLKKFGYIDDSDERKESPLPEKGSVEDIFYAEDG 168

Query: 2382 MLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVR--NSVRMRRSKTSVAEL 2209
            +LP+S GG   +    V            FPWEKR  N E V   +S R RRSKTS+AEL
Sbjct: 169  ILPDSSGGLSLDLNKEVR-----------FPWEKRLENKEGVGGGSSARKRRSKTSLAEL 217

Query: 2208 TLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKR 2029
            TLP+ ELRRLRH+AV +KS+ KI GAGVTK IVD IHE+WK +EVVRLKCEG P LNMKR
Sbjct: 218  TLPEGELRRLRHMAVRIKSKTKIKGAGVTKEIVDLIHEQWKTTEVVRLKCEGAPALNMKR 277

Query: 2028 LHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKAT 1849
             HEILERKTGGLVIWRSGTS+SLYRGVGYE+   +  K++ Q V +   D+F+  T   T
Sbjct: 278  THEILERKTGGLVIWRSGTSISLYRGVGYEILLPE--KRQYQNVQRSAVDTFNKGTYHPT 335

Query: 1848 GDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGP 1669
            G S        +Q        + E+KK+     EIKYE EIDKLLDGLGPRYTDWPGS P
Sbjct: 336  GVSTANGRGNNVQDLQEDSTASLEKKKDTEPDAEIKYEREIDKLLDGLGPRYTDWPGSDP 395

Query: 1668 LPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGL 1489
            LPVDADLLP +VPGYK PFRILPYGVR T+G KE T+LRRLAR+LPPHFALGRSRQHQGL
Sbjct: 396  LPVDADLLPSLVPGYKPPFRILPYGVRRTLGLKEGTALRRLARLLPPHFALGRSRQHQGL 455

Query: 1488 AMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLS 1309
            A AM KLWE+SSIA IALKRGVQLT SERMAE+IKKLTGG +++ NKD++VFYRGK+FL+
Sbjct: 456  AAAMVKLWEKSSIAKIALKRGVQLTMSERMAEEIKKLTGGMILSSNKDYLVFYRGKDFLA 515

Query: 1308 PDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGK 1129
            P+VTEALLERERLAK LQD+EE+ARL+ASSS++S+FE   +PGTAGTL ETLEADARWG 
Sbjct: 516  PEVTEALLERERLAKTLQDKEEQARLRASSSVVSNFEIADEPGTAGTLGETLEADARWGN 575

Query: 1128 RLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDP 949
            RLD ++  KMMRAAE ARHADLVRKL+ +L +AER+LMKAE  L+KVE  L+PAE ++DP
Sbjct: 576  RLDQDHMEKMMRAAEMARHADLVRKLERRLSIAERRLMKAEKALSKVEESLKPAEHAADP 635

Query: 948  ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVK 769
            ESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVKVI+  + F Q K
Sbjct: 636  ESITDEERFMFRKLGLRMKAFLLLGRRGVFAGTVENMHLHWKYRELVKVIVKTKTFEQAK 695

Query: 768  NVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQR 589
            ++AL+LE+ESGGVLVSVDKVSKGFAIIVYRGKDYQRP  LRPKNLLTKRKALARSIELQR
Sbjct: 696  HIALSLESESGGVLVSVDKVSKGFAIIVYRGKDYQRPPALRPKNLLTKRKALARSIELQR 755

Query: 588  HEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYL 409
            HEA+  HISNLQ++V+ L+SEL QM++VKD+GDE+LY KL+SAY +          EAYL
Sbjct: 756  HEAISHHISNLQKRVEQLRSELVQMDNVKDQGDEDLYAKLDSAYSTEDEDTEDEDDEAYL 815

Query: 408  ETCHSGAD 385
             T ++  D
Sbjct: 816  HTFNTAVD 823


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
            gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
            1 [Theobroma cacao]
          Length = 876

 Score =  963 bits (2490), Expect = 0.0
 Identities = 528/896 (58%), Positives = 638/896 (71%), Gaps = 18/896 (2%)
 Frame = -1

Query: 2907 TCQIHP-----TAFIDSFQASLSRFSGYRLQFLRYSHSN-PHKKHHFSSNLRTISSAPFP 2746
            T Q HP     + F+DSFQ  LS+F G  L F  Y  SN P K     +   T++S    
Sbjct: 6    TRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVTSNSLF 65

Query: 2745 ERNPQKKSNLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDY 2566
             + P+ K+       K  P + P  ++         NW+D W+ T     PK PK V +Y
Sbjct: 66   HQYPKSKT-------KAFPTKDPTFRS---------NWLDSWNKTHKGFGPKPPKTVFNY 109

Query: 2565 RNXXXXXXXXXXXXXXXXXXXT--MDRIVEKLKRFGYVDDMIERNE-------RVPERGS 2413
            R                    +  M++IVEKLK+FGY+ +  E+ E       RV ERGS
Sbjct: 110  RKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGS 169

Query: 2412 VEDIFYVEEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRR 2233
            +EDIFYVEEGMLPN+RGGF  ESPL +EN + G DG   FPWEKR  + E    + R R 
Sbjct: 170  IEDIFYVEEGMLPNNRGGFSKESPLGMENVF-GSDGEVRFPWEKRKEDEEEGGWTAR-RD 227

Query: 2232 SKTSVAELTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEG 2053
            SKTS+AELTLP+SELRRLR+L    KS+++I GAGVT+ +VD IHEKWK  E+VRLK EG
Sbjct: 228  SKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEG 287

Query: 2052 PPTLNMKRLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSF 1873
             P LNMKR+HEILERKTGGLVIWRSGTSVSLYRGV YE+PS    K+    + K+N ++F
Sbjct: 288  APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKR----IYKRN-ETF 342

Query: 1872 SIATEKA---TGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLG 1702
            + A       T D     SH  + +  A+ E  AE  K+  S+PEI+YE E+DKLL+GLG
Sbjct: 343  TYALPSVSDKTKDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLG 402

Query: 1701 PRYTDWPGSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHF 1522
            PRYTDWPG  PLPVDADLLPG+V GY+ PFR+LPYGVR ++G KE TSLRRLARVLPPHF
Sbjct: 403  PRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHF 462

Query: 1521 ALGRSRQHQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDF 1342
            A+GRSRQ QGLA+AM KLWE+SSIA IALKRGVQLTTSERMAEDIKKLTGG L++RNKDF
Sbjct: 463  AIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDF 522

Query: 1341 IVFYRGKNFLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLE 1162
            +VFYRGKNFLS DV EAL+ERERLAK LQDEEE+ARL+AS+ L+   E  +Q G AGTL 
Sbjct: 523  LVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLG 582

Query: 1161 ETLEADARWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEA 982
            ETL+ADARWGKRLD+ ++ K+M+ AE  RHA+LVRKLD  L  A+RKL+KAE  L KVE 
Sbjct: 583  ETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVED 642

Query: 981  LLQPAERSSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKV 802
             L+PA+R +DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+
Sbjct: 643  YLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI 702

Query: 801  IINARNFSQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKR 622
            I+ A+ F QVK VALALEAESGGVLVSVD++SKG+AIIVYRGKDYQRP T+RPKNLLTKR
Sbjct: 703  IMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKR 762

Query: 621  KALARSIELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXX 442
            +ALARSIELQR EAL KH+S LQ KV  ++SE+DQM S++++GDEE Y++L+S+YP+   
Sbjct: 763  RALARSIELQRREALVKHVSALQAKVDKIRSEIDQMHSMEEQGDEEFYDRLDSSYPTDDD 822

Query: 441  XXXXXXXEAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
                   EAYLET  S  D E+              ++  I + H ET FP+  Q+
Sbjct: 823  DTEEEGDEAYLETYESENDAEEE-------------NDELIHNLHLETKFPFHDQH 865


>ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Gossypium raimondii]
            gi|763754573|gb|KJB21904.1| hypothetical protein
            B456_004G020400 [Gossypium raimondii]
          Length = 853

 Score =  956 bits (2471), Expect = 0.0
 Identities = 523/897 (58%), Positives = 630/897 (70%), Gaps = 12/897 (1%)
 Frame = -1

Query: 2928 LMSPVSSTCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSN-PHKKHHFSSNLRTISSAP 2752
            L  P ++T     T F+DSFQ SLSRF G  L F RYS S+ P K  +F ++   I+S  
Sbjct: 3    LFHPTTTT----KTTFLDSFQTSLSRFHGLPLPFFRYSSSHFPLKTLNFCASKHAITSNA 58

Query: 2751 FPERNPQKKSNLVAENRKNGPLETPISQTPSNGSFP--NGNWMDEWSGTQFQNLPKRPKA 2578
                NP+ K+                       +FP  + NW+D W+ T  +N PK PK 
Sbjct: 59   QIHPNPESKTK----------------------AFPTFSSNWLDNWNKTHKRNGPKPPKT 96

Query: 2577 VLDYRNXXXXXXXXXXXXXXXXXXXT--MDRIVEKLKRFGYVDDMIERNERVP----ERG 2416
            V +YR                    +  M++IVEKLK+FGY+ +  E+ E  P    ERG
Sbjct: 97   VFNYRKDGNLWSLSYSKSDNNGSGSSSTMEKIVEKLKKFGYIGEENEQKEEQPRKVIERG 156

Query: 2415 SVEDIFYVEEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMR 2236
            S+ED+FYVEEGMLPN+RGGF  ESPL +E  + G DG  +FPWEKR    E  + + R  
Sbjct: 157  SIEDMFYVEEGMLPNTRGGFSKESPLGMETEF-GSDGEIMFPWEKRKEEQEEGKWTAR-G 214

Query: 2235 RSKTSVAELTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCE 2056
             +K S+AELTLP+SELRRLR+L    KS+M+I GAGVT+ +VD IHEKWK  E+VRLK E
Sbjct: 215  DNKASLAELTLPESELRRLRNLTFRTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVE 274

Query: 2055 GPPTLNMKRLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDS 1876
            G P LNMKR+HEILERKTGGLVIWRSGTS+SLYRGV YE+PS   V    Q+  +    +
Sbjct: 275  GAPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVPS---VHLNKQIYKRNEMST 331

Query: 1875 FS--IATEKATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLG 1702
            +S  + ++K T D      H  +    ++ E   EE K    +PEIKYE E+DKLL+GLG
Sbjct: 332  YSSPLVSDK-TEDPSGLVPHKDVAPPQSNSETATEEHKNTEPLPEIKYEDEVDKLLEGLG 390

Query: 1701 PRYTDWPGSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHF 1522
            PRY DWPG  PLPVDADLLPG+VPGY+ PFR+LPYGVR ++G KE TSLRRLARVLPPHF
Sbjct: 391  PRYADWPGCDPLPVDADLLPGIVPGYQPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHF 450

Query: 1521 ALGRSRQHQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDF 1342
            A+GRSRQ QGLA+AM KLWE+SSIA IALKRGVQLTTSERMAED+KKLTGG L++RNKDF
Sbjct: 451  AIGRSRQLQGLAVAMTKLWEKSSIAKIALKRGVQLTTSERMAEDLKKLTGGILLSRNKDF 510

Query: 1341 IVFYRGKNFLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLE 1162
            +VFYRGKNFLS DV EALLERERLAK LQD EE+ARL+AS+      E  +Q G AGTL 
Sbjct: 511  LVFYRGKNFLSADVAEALLERERLAKSLQDVEEQARLRASALFAQSTEVAEQSGAAGTLG 570

Query: 1161 ETLEADARWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEA 982
            ETL+ADARWGKRLDD ++ K+++ AE  RHA+LVRKL+  L  AERKL+KAE  L+KVE 
Sbjct: 571  ETLDADARWGKRLDDHHKEKVLKEAEILRHANLVRKLEKNLAFAERKLLKAERALSKVED 630

Query: 981  LLQPAERSSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKV 802
             L+PA+R +DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+
Sbjct: 631  YLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI 690

Query: 801  IINARNFSQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKR 622
            I+ A+NF QVK VA+ALEAESGGVLVSVDK+SKG+AIIVYRGKDY+RP T+RPKNLLTKR
Sbjct: 691  IMKAKNFDQVKKVAIALEAESGGVLVSVDKISKGYAIIVYRGKDYERPSTIRPKNLLTKR 750

Query: 621  KALARSIELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPS-AX 445
            +ALARSIELQR EAL KHIS LQ KV+ L+SE+DQM S+   GDEE Y++L+S+YPS   
Sbjct: 751  RALARSIELQRREALVKHISALQAKVEKLRSEIDQMHSMDARGDEEFYDRLDSSYPSDDD 810

Query: 444  XXXXXXXXEAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
                    EAYL T     D E+                      H ETNFP+ +Q+
Sbjct: 811  DDTEEEGDEAYLGTYDGENDGEEEND-----------------DLHLETNFPFHNQH 850


>ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 886

 Score =  955 bits (2468), Expect = 0.0
 Identities = 521/894 (58%), Positives = 633/894 (70%), Gaps = 14/894 (1%)
 Frame = -1

Query: 2916 VSSTCQIHP--TAFIDSFQASLSRFS-GYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFP 2746
            V  + Q +P  +  +D+FQ+S+S+F     LQF RYS S P K   F     T S    P
Sbjct: 3    VMPSYQFYPKNSFLMDTFQSSVSKFHVRTTLQFFRYSSSLPVKNRFFCVIDETSSRNSVP 62

Query: 2745 ERNPQKKSNLVAENRKNGPL---ETPISQTP-SNGSFPNGNWMDEWSGTQFQNLPKRPKA 2578
            + NP K+ NL+  N+K G     E PISQ+  S       +W+  W  T   N  +RP+A
Sbjct: 63   QENPHKRFNLLPRNKKGGSSFSGEEPISQSSNSRVILSRSSWLANWDVTSKPNGGRRPQA 122

Query: 2577 VLDYRNXXXXXXXXXXXXXXXXXXXT-MDRIVEKLKRFGYVDDMIERNER---VPERGSV 2410
            V++YRN                   + M RIVEKLK+FGY+DD   +NE    V E+GS+
Sbjct: 123  VVNYRNRGDVSSSDSEEGTSTSSGGSTMQRIVEKLKKFGYIDDDSNKNENMGGVIEKGSI 182

Query: 2409 EDIFYVEEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRS 2230
            EDIFYVEEG+LPN+RGGF  E P   EN    G+G   FPWEK  L  +  + S+  RRS
Sbjct: 183  EDIFYVEEGLLPNTRGGFSEEFPFGDENGVARGNGEVRFPWEKDALGEQ--KRSLDSRRS 240

Query: 2229 KTSVAELTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGP 2050
            + S+AELTLP+ ELRRL +LA+ +K++ +IGGAGVT+ +V+ I EKWK SEVVRLK EGP
Sbjct: 241  R-SLAELTLPEPELRRLTNLALRIKNKTRIGGAGVTQQVVETIREKWKTSEVVRLKIEGP 299

Query: 2049 PTLNMKRLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKK---SQLVPKKNHD 1879
            P LNM+R+HEILERKTGGLVIWRSGTS++LYRGV YE  SA  +KK+      +P K+H 
Sbjct: 300  PALNMRRMHEILERKTGGLVIWRSGTSLALYRGVTYE-DSATKLKKRIFRRNELPHKSHS 358

Query: 1878 SFSIATEKATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGP 1699
                AT+K   DS E       +           + ++P +  E++YE E+DKLLD LGP
Sbjct: 359  ----ATDKTGQDSSESGVLPDREVPSPESVSLNPDDRDPETSSEVRYEDEVDKLLDSLGP 414

Query: 1698 RYTDWPGSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFA 1519
            RYTDWPG  PLPVDADLLPG VPGY+ PFR+LPYGVR T+G KE T+LRRLARVLPPHFA
Sbjct: 415  RYTDWPGDDPLPVDADLLPGTVPGYRPPFRLLPYGVRSTLGMKEATALRRLARVLPPHFA 474

Query: 1518 LGRSRQHQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFI 1339
            LGRSRQHQGLA AM KLWERSSIA IALKRGVQLTTSERMAED+K+LTGG L++RNKDF+
Sbjct: 475  LGRSRQHQGLAAAMIKLWERSSIAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFL 534

Query: 1338 VFYRGKNFLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEE 1159
            V+YRGK+FLSPDV EALLE+ERLAK LQDEEE+ARL+A + +    E   + GTAGTL+E
Sbjct: 535  VYYRGKDFLSPDVAEALLEKERLAKALQDEEEQARLRALALIAPAVEETDESGTAGTLKE 594

Query: 1158 TLEADARWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEAL 979
            TL+AD RWGKRLDD ++ K+MR AE  RHA+LVRKL+ KL  AERKL KAE  L+KVE  
Sbjct: 595  TLDADTRWGKRLDDVHKEKVMREAEVLRHANLVRKLENKLAFAERKLSKAERALSKVEES 654

Query: 978  LQPAERSSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVI 799
            L PA+R+ DPES+TDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVK+I
Sbjct: 655  LYPADRAQDPESLTDEERFMFRKLGLRMKAFLLLGRRGVFGGTVENMHLHWKYRELVKII 714

Query: 798  INARNFSQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRK 619
            + A+N  +VKN+ALALEAESGGVLVSVDKVSKG+AIIV+RG+DY+RP  LRPKNLLTKRK
Sbjct: 715  VKAQNIEEVKNIALALEAESGGVLVSVDKVSKGYAIIVFRGRDYKRPSLLRPKNLLTKRK 774

Query: 618  ALARSIELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXX 439
            ALARSIELQR EAL  H+S LQ +V  L+SE++QM +VK++GDEELY KL+SAY +    
Sbjct: 775  ALARSIELQRREALLNHMSTLQTRVNQLRSEIEQMAAVKEQGDEELYNKLDSAYLTED-- 832

Query: 438  XXXXXXEAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQ 277
                      E      D E + G   S       +N S+ + +  TNFPYD Q
Sbjct: 833  ----------EDSEEEGDEEAYLGTYDSDNDMVDENNDSVHNTYLGTNFPYDFQ 876


>gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium arboreum]
          Length = 853

 Score =  954 bits (2465), Expect = 0.0
 Identities = 522/897 (58%), Positives = 627/897 (69%), Gaps = 12/897 (1%)
 Frame = -1

Query: 2928 LMSPVSSTCQIHPTAFIDSFQASLSRFSGYRLQFLRYSHSN-PHKKHHFSSNLRTISSAP 2752
            L  P ++T     T F+DSFQ SLSRF G    F RYS  + P K  +F +N  TI+S  
Sbjct: 3    LFHPTTTT----KTTFLDSFQTSLSRFHGLPHPFFRYSSFHFPLKTLNFCANNHTITSNS 58

Query: 2751 FPERNPQKKSNLVAENRKNGPLETPISQTPSNGSFP--NGNWMDEWSGTQFQNLPKRPKA 2578
                NP+ K+                        FP  + NW+D W+ T  +N PK PK 
Sbjct: 59   QIHPNPESKTK----------------------GFPTFSSNWLDNWNKTHKRNGPKPPKT 96

Query: 2577 VLDYRNXXXXXXXXXXXXXXXXXXXT--MDRIVEKLKRFGYVDDMIERNERVP----ERG 2416
            V +YR                    +  M++IVEKLK+FGY+ +  E+ E  P    ERG
Sbjct: 97   VFNYRKDGNLWSLSYSKSDNNGSGSSSTMEKIVEKLKKFGYIGEENEQKEEQPRKVIERG 156

Query: 2415 SVEDIFYVEEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMR 2236
            S+ED+FYVEEGMLPN+RGGF  ESPL +E  + G DG  +FPWEKR    E  + + R  
Sbjct: 157  SIEDMFYVEEGMLPNTRGGFSKESPLGMETEF-GSDGEIMFPWEKRKEEQEEGKWTAR-G 214

Query: 2235 RSKTSVAELTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCE 2056
             +K S+AELTLP+SELRRLR+L    KS+M+I GAGVT+ +VD IHEKWK  E+VRLK E
Sbjct: 215  DNKASLAELTLPESELRRLRNLTFRTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVE 274

Query: 2055 GPPTLNMKRLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDS 1876
            G P LNMKR+HEILERKTGGLVIWRSGTS+SLYRGV YE+PS   V    Q+  +    +
Sbjct: 275  GAPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVPS---VHLNKQIYKRNEMST 331

Query: 1875 FS--IATEKATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLG 1702
            +S  + ++K T D  +   H  +     + E   EE K    +PEIKYE E+DKLL+GLG
Sbjct: 332  YSSPLVSDK-TEDPSDLVPHKDVAPPQTNSETATEEHKNTEPLPEIKYEDEVDKLLEGLG 390

Query: 1701 PRYTDWPGSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHF 1522
            PRY DWPG  PLPVDADLLPG+VPGY+ PFR+LPYGVR ++G KE TSLRRLARVLPPHF
Sbjct: 391  PRYADWPGCDPLPVDADLLPGIVPGYQPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHF 450

Query: 1521 ALGRSRQHQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDF 1342
            ALGRSRQ QGLA+AM KLWE+SSIA IALKRGVQLTTSERMAED+KKLTGG L++RNKDF
Sbjct: 451  ALGRSRQLQGLAVAMTKLWEKSSIAKIALKRGVQLTTSERMAEDLKKLTGGILLSRNKDF 510

Query: 1341 IVFYRGKNFLSPDVTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLE 1162
            +VFYRGKNFLS DV EALLERERLAK LQD EE+ARL+AS+      E  +Q G AGTL 
Sbjct: 511  LVFYRGKNFLSADVAEALLERERLAKSLQDVEEQARLRASALFAQSTEVAEQSGAAGTLG 570

Query: 1161 ETLEADARWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEA 982
            ETL+ADARWGKRLDD ++ K+++ AE  RHA+LVRKL+  L  AERKL+KAE  L+KVE 
Sbjct: 571  ETLDADARWGKRLDDHHKEKVLKEAEILRHANLVRKLEKNLAFAERKLLKAEQALSKVED 630

Query: 981  LLQPAERSSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKV 802
             L+PA+R +DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+
Sbjct: 631  YLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI 690

Query: 801  IINARNFSQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKR 622
            I+ A+NF QVK VA+ALEAESGGVLVSVDK+SKG+AIIVYRG DY+RP T+RPKNLLTKR
Sbjct: 691  IMKAKNFDQVKKVAIALEAESGGVLVSVDKISKGYAIIVYRGNDYERPSTIRPKNLLTKR 750

Query: 621  KALARSIELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPS-AX 445
            +ALARSIELQR EAL KHIS LQ KV+ ++SE+DQM S+   GDEE Y++L+S+YPS   
Sbjct: 751  RALARSIELQRREALVKHISALQAKVEKIRSEIDQMHSMDARGDEEFYDRLDSSYPSDDD 810

Query: 444  XXXXXXXXEAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFHPETNFPYDHQN 274
                    EAYL T     D E+                      H ETNFP+ +Q+
Sbjct: 811  DDTEEEGDEAYLGTYDGENDGEEEND-----------------DLHLETNFPFHNQH 850


>gb|KDO45877.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 936

 Score =  949 bits (2453), Expect = 0.0
 Identities = 520/911 (57%), Positives = 630/911 (69%), Gaps = 39/911 (4%)
 Frame = -1

Query: 2889 TAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKSNLVA 2710
            TA  DSFQ+S S+F G    F R  HS P K   F  N    SS    E+NP +K+   +
Sbjct: 13   TAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQN---FSSNSAHEKNPPRKTCSFS 69

Query: 2709 ENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYR---------NX 2557
             N       +   +  +     + +W+ +W+     N  K P+A ++YR           
Sbjct: 70   TNN----FFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGF 125

Query: 2556 XXXXXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDD------------MIERNERVPERGS 2413
                              TM +IVEKLK+FGYV D              +  ERV E+GS
Sbjct: 126  ARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGS 185

Query: 2412 VEDIFYVEEGMLPNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRR 2233
            +EDIFYVEEG+LPN+RGGF  ESPL +     G DG   FPWEKR       R  V+ R 
Sbjct: 186  IEDIFYVEEGLLPNARGGFSKESPLGLGEEV-GSDGEVKFPWEKRKEEVAEGRWLVKRRS 244

Query: 2232 SKTSVAELTLPDSELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEG 2053
            S+TS+AELTLP+SELRRLR+L    KS+ +I GAG+T+A+VD IHEKWK SE+VRLK EG
Sbjct: 245  SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304

Query: 2052 PPTLNMKRLHEILERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKK-----------KS 1906
             P LNMKR+HEILERKTGGLVIWRSGT+VSLYRGV YE+PS Q  K+            S
Sbjct: 305  APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVS 364

Query: 1905 QLVPKKNH-------DSFSIATEKATGDSIEKSSHVYMQATHASLEDTAEEKKEPNSMPE 1747
            Q   K+ H       +S S A +K   D     S+  + AT  +LE TA E++E + + E
Sbjct: 365  QATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLE-TASEEQETDFVRE 423

Query: 1746 IKYETEIDKLLDGLGPRYTDWPGSGPLPVDADLLPGVVPGYKSPFRILPYGVRPTIGGKE 1567
            +KYE E++KLLDGLGPRYTDWPG  PLPVDAD+LPG+VPGY+ PFR+LPYGVR T+  KE
Sbjct: 424  VKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKE 483

Query: 1566 MTSLRRLARVLPPHFALGRSRQHQGLAMAMAKLWERSSIAIIALKRGVQLTTSERMAEDI 1387
             T+L+RLARVLPPHFALGRSRQ QGLA+AM KLWE+SSIA IALKRGVQLTTSERM EDI
Sbjct: 484  ATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI 543

Query: 1386 KKLTGGTLITRNKDFIVFYRGKNFLSPDVTEALLERERLAKDLQDEEERARLQASSSLIS 1207
            KKLTGGTL++RNKDF+VFYRGKNFLSPDVTEAL ERERLAK LQDEEE+ARL+AS+ ++ 
Sbjct: 544  KKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLP 603

Query: 1206 DFERIKQPGTAGTLEETLEADARWGKRLDDEYRNKMMRAAEAARHADLVRKLDLKLHLAE 1027
              E I++ GTAGTL+ETL+A++RWGKRLDD ++  ++R AE  RHA LV+KL+ KL  AE
Sbjct: 604  SIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAE 663

Query: 1026 RKLMKAESVLAKVEALLQPAERSSDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 847
            RKL++AE  L+KVE  L+PAER +DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV
Sbjct: 664  RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 723

Query: 846  ENMHLHWKYRELVKVIINARNFSQVKNVALALEAESGGVLVSVDKVSKGFAIIVYRGKDY 667
            ENMHLHWKYRELVK+I+  + F Q K +ALALEAESGGVLVSVDK+SKG+A++VYRGKDY
Sbjct: 724  ENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 783

Query: 666  QRPRTLRPKNLLTKRKALARSIELQRHEALCKHISNLQQKVKNLKSELDQMESVKDEGDE 487
            QRP TLRPKNLLTKRKALARSIELQR EAL KH++ L+     L+SE++QM SVK  GDE
Sbjct: 784  QRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDE 843

Query: 486  ELYEKLESAYPSAXXXXXXXXXEAYLETCHSGADNEDHYGYISSAXXXXXXDNTSIRSFH 307
            +LY+KL+SAY +          EAYLE    G DNED               + S  +  
Sbjct: 844  QLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDE-------------IDNSTHNLE 890

Query: 306  PETNFPYDHQN 274
             E++FPY  Q+
Sbjct: 891  MESDFPYHAQD 901


>ref|XP_009394449.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 918

 Score =  947 bits (2447), Expect = 0.0
 Identities = 515/820 (62%), Positives = 602/820 (73%), Gaps = 5/820 (0%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKS 2722
            Q+H T   DS  AS SR    RL         P ++       R  SSA FP RNP    
Sbjct: 5    QLHSTTLFDSLHASFSRLHFPRLLL-------PLRRCRCC---RFSSSATFPSRNPY--- 51

Query: 2721 NLVAENRKNGPLETPISQT-PS-NGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXX 2548
                      P   P  +T PS      +  W+  W+  +F++LPK+P+A LDYR     
Sbjct: 52   ----------PNRDPCDKTLPSLKSDHQSAPWIKNWTEPRFRSLPKKPRAALDYRQSVSS 101

Query: 2547 XXXXXXXXXXXXXXXTMDRIVEKLKRFGYVDDMIERNER-VPERGSVEDIFYVEEGMLPN 2371
                            M +IVEKL++FGY+DD  E  ER +PE+GSVEDIFY E+G+LP+
Sbjct: 102  DDDEYGTSRSTGSSA-MAKIVEKLRKFGYIDDSEEVKERPLPEKGSVEDIFYAEDGILPD 160

Query: 2370 SRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTLPDSE 2191
            SRGG   +            + +  FPWEK     E  + S R  RSKTS+AELTLP+ E
Sbjct: 161  SRGGLSWDV-----------NEKARFPWEKPREEEEEKQASARKTRSKTSLAELTLPEGE 209

Query: 2190 LRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLHEILE 2011
            LRRLRHLA+  KS+ KIGGAGVTK IVD IHEKWK  EVVRLKCEGPP LNMKR+HEILE
Sbjct: 210  LRRLRHLAIRTKSKTKIGGAGVTKEIVDLIHEKWKTEEVVRLKCEGPPALNMKRMHEILE 269

Query: 2010 RKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIATEKATGDSIE- 1834
            RKTGGLVIWRSGTS+SLYRGV YE+P  Q VK+  Q   + + DSF           +E 
Sbjct: 270  RKTGGLVIWRSGTSISLYRGVTYEIP--QLVKRPYQSNQRASLDSFKQPLGYRAEAFVEN 327

Query: 1833 -KSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPLPVD 1657
             + SHV     H +++   EE+K+  S P+I+YE+EIDKLLD LGPRYTDWPGSGP PVD
Sbjct: 328  GRGSHVAGPIEHLTVK--VEEEKDVESPPKIEYESEIDKLLDDLGPRYTDWPGSGPPPVD 385

Query: 1656 ADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLAMAM 1477
            ADLLP VVPGYK PFRILPYGVRP++G KE T+LRRLAR LPPHFALGRSRQHQGLA AM
Sbjct: 386  ADLLPSVVPGYKPPFRILPYGVRPSLGLKEGTALRRLARALPPHFALGRSRQHQGLAAAM 445

Query: 1476 AKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSPDVT 1297
             KLWE+SSIA I+LKRGVQLT+SERMAEDIKKLTGG +++RNKD+IVFYRGK+FLSP+VT
Sbjct: 446  VKLWEKSSIAKISLKRGVQLTSSERMAEDIKKLTGGAILSRNKDYIVFYRGKDFLSPEVT 505

Query: 1296 EALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKRLDD 1117
            EALLERERLAK LQDEEE+ARL+ASSS+ SD +   + GTAGTL ETLEA ARWG  + D
Sbjct: 506  EALLERERLAKALQDEEEQARLRASSSVASDVDSFDESGTAGTLNETLEAAARWGNNIGD 565

Query: 1116 EYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPESIT 937
            ++ +KMMRAAE ARHA LV+KL+ KL +AERKL KA   LAKVE  L+P E   DPE+IT
Sbjct: 566  DHMDKMMRAAEMARHAGLVKKLERKLFIAERKLTKAGKALAKVEESLKPTEHVKDPEAIT 625

Query: 936  DEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKNVAL 757
            DEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+I+ A+ F+QV+NVAL
Sbjct: 626  DEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKAKTFAQVQNVAL 685

Query: 756  ALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRHEAL 577
            ALEAESGGVLVSVDK+SKGFAIIVYRGKDY RP TLRPKNLLTKRKALARSIELQR EAL
Sbjct: 686  ALEAESGGVLVSVDKISKGFAIIVYRGKDYHRPPTLRPKNLLTKRKALARSIELQRREAL 745

Query: 576  CKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAY 457
             +HISN+Q+KV+ L+SEL  +++VKD GDEELY  L+SAY
Sbjct: 746  NRHISNVQKKVEQLRSELVHLDNVKDHGDEELYANLDSAY 785


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  947 bits (2447), Expect = 0.0
 Identities = 505/849 (59%), Positives = 626/849 (73%), Gaps = 7/849 (0%)
 Frame = -1

Query: 2901 QIHPTAFIDSFQASLSRFSGYRLQFLRYSHSNPHKKHHFSSNLRTISSAPFPERNPQKKS 2722
            Q++PT+ ++S   SLS+F G      RYS S P KK  F +    I+S+  PE+NP +K 
Sbjct: 8    QLYPTSLLES---SLSKFHGTHFHLFRYS-SIPFKKQSFHATQYFITSSLTPEQNPPRKL 63

Query: 2721 NLVAENRKNGPLETPISQTPSNGSFPNGNWMDEWSGTQFQNLPKRPKAVLDYRNXXXXXX 2542
            NL+            I Q     +  + +W+D W+ ++ Q+ P+RP+AVLDY++      
Sbjct: 64   NLL------------ICQYKPTKNLSSCSWIDRWNDSRKQHGPRRPRAVLDYQSNESGNL 111

Query: 2541 XXXXXXXXXXXXXTMDRIVEKLKRFGYV-----DDMIERNERVPERGSVEDIFYVEEGML 2377
                          MD+IVEKLK+FGY+     +   E  ERV E+GSVEDIFYVEEGML
Sbjct: 112  SSDGNDGGST----MDKIVEKLKKFGYIAEDKNEGRGEVRERVIEKGSVEDIFYVEEGML 167

Query: 2376 PNSRGGFPAESPLVVENSYNGGDGRPLFPWEKRPLNGEAVRNSVRMRRSKTSVAELTLPD 2197
            PNSRGGF   SPL  E+ +  G G   FPWEK     +    S+R RRS+TS+AELTLP+
Sbjct: 168  PNSRGGFSGVSPLGTEDVFGDGGGEVRFPWEKPREREKEEGGSIR-RRSRTSLAELTLPE 226

Query: 2196 SELRRLRHLAVAMKSRMKIGGAGVTKAIVDAIHEKWKLSEVVRLKCEGPPTLNMKRLHEI 2017
            SELRRLR+L    K + KIGGAGVT+A+V+ IHE+WK +E+VRLK EGPP LNMKR+HEI
Sbjct: 227  SELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLKIEGPPALNMKRMHEI 286

Query: 2016 LERKTGGLVIWRSGTSVSLYRGVGYELPSAQSVKKKSQLVPKKNHDSFSIAT--EKATGD 1843
            LERKTGGLV+WRSGTS+SLYRGV YE+PS Q  K   Q+  +    S S+ T  +K+  +
Sbjct: 287  LERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNK---QIFKRNEISSTSLPTVADKSVAE 343

Query: 1842 SIEKSSHVYMQATHASLEDTAEEKKEPNSMPEIKYETEIDKLLDGLGPRYTDWPGSGPLP 1663
                +++  ++      E+ ++E ++   +PE+KYE E+D+LLD +GPR+ DWPG  PLP
Sbjct: 344  PYVCATYSNVKTPLEMSENASQETEDTEQLPEVKYEDEVDELLDSIGPRFKDWPGCDPLP 403

Query: 1662 VDADLLPGVVPGYKSPFRILPYGVRPTIGGKEMTSLRRLARVLPPHFALGRSRQHQGLAM 1483
            VDAD+LPG+VPG++ PFRILPYGVR T+G KE TSLRRLARVLPPHFALGR+RQ QGLA+
Sbjct: 404  VDADMLPGIVPGFQPPFRILPYGVRSTLGLKEATSLRRLARVLPPHFALGRNRQLQGLAV 463

Query: 1482 AMAKLWERSSIAIIALKRGVQLTTSERMAEDIKKLTGGTLITRNKDFIVFYRGKNFLSPD 1303
            AM+KLWERS IA IALKRGVQLTTSERMAEDIKKLTGG L++RNKDF+VFYRGKNFLS +
Sbjct: 464  AMSKLWERSLIAKIALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSAE 523

Query: 1302 VTEALLERERLAKDLQDEEERARLQASSSLISDFERIKQPGTAGTLEETLEADARWGKRL 1123
            VTEAL+ERERLAK LQDEEE+ARL+AS+ ++   E  +  GTAGTL ETL+ADA+WGKRL
Sbjct: 524  VTEALVERERLAKSLQDEEEQARLRASAMVMPSIEPAQHFGTAGTLGETLDADAKWGKRL 583

Query: 1122 DDEYRNKMMRAAEAARHADLVRKLDLKLHLAERKLMKAESVLAKVEALLQPAERSSDPES 943
            D  ++ K+ + A   RHA LVRKL+ KL  AERKLM AE  L+KVE  L+P+++ +DPES
Sbjct: 584  DVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLMGAEQALSKVEESLKPSKQQADPES 643

Query: 942  ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIINARNFSQVKNV 763
            ITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++NA+NF QVK +
Sbjct: 644  ITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKNFDQVKKI 703

Query: 762  ALALEAESGGVLVSVDKVSKGFAIIVYRGKDYQRPRTLRPKNLLTKRKALARSIELQRHE 583
            ALALEAESGGVLVSVDKVSK +AIIVYRG DYQRP  LRPKNLLTKRKALARSIELQR E
Sbjct: 704  ALALEAESGGVLVSVDKVSKKYAIIVYRGNDYQRPSMLRPKNLLTKRKALARSIELQRQE 763

Query: 582  ALCKHISNLQQKVKNLKSELDQMESVKDEGDEELYEKLESAYPSAXXXXXXXXXEAYLET 403
            AL KHI+ +Q +V  L+SE++QM++VK  GDE LY KL+S YP+          +AYLET
Sbjct: 764  ALLKHIAAVQSRVDRLRSEIEQMDTVKHHGDEALYNKLDSCYPT-DYEDTEEEGDAYLET 822

Query: 402  CHSGADNED 376
              S  D E+
Sbjct: 823  YSSKNDGEE 831