BLASTX nr result

ID: Cinnamomum24_contig00008802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00008802
         (553 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF26766.1|AC007396_15 T4O12.26 [Arabidopsis thaliana]              57   7e-06
gb|AAO22646.1| unknown protein [Arabidopsis thaliana]                  56   9e-06
ref|NP_177733.2| protein EMBRYO DEFECTIVE 1793 [Arabidopsis thal...    56   9e-06

>gb|AAF26766.1|AC007396_15 T4O12.26 [Arabidopsis thaliana]
          Length = 179

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
 Frame = -1

Query: 211 CN*KEMAMELEKWRKFAISF---SRSGAILQRYFLHDGPDTVEELLERHIXXXXXXXXXX 41
           C  + MA +L+KWR  A      +RSGA+  R FLH+GPDTVEELLERH+          
Sbjct: 19  CLREMMAAKLQKWRNLAGRLDLMNRSGAVSTRRFLHEGPDTVEELLERHLAKKEKPIIDH 78

Query: 40  XELS--RRQRLTSSR 2
            E     R+RLTS+R
Sbjct: 79  DEAEFLNRRRLTSTR 93


>gb|AAO22646.1| unknown protein [Arabidopsis thaliana]
          Length = 157

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
 Frame = -1

Query: 196 MAMELEKWRKFAISF---SRSGAILQRYFLHDGPDTVEELLERHIXXXXXXXXXXXELS- 29
           MA +L+KWR  A      +RSGA+  R FLH+GPDTVEELLERH+           E   
Sbjct: 2   MAAKLQKWRNLAGRLDLMNRSGAVSTRRFLHEGPDTVEELLERHLAKKEKPIIDHDEAEF 61

Query: 28  -RRQRLTSSR 2
             R+RLTS+R
Sbjct: 62  LNRRRLTSTR 71


>ref|NP_177733.2| protein EMBRYO DEFECTIVE 1793 [Arabidopsis thaliana]
           gi|51972146|gb|AAU15177.1| At1g76060 [Arabidopsis
           thaliana] gi|332197670|gb|AEE35791.1| LYR family of Fe/S
           cluster biogenesis protein [Arabidopsis thaliana]
          Length = 157

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
 Frame = -1

Query: 196 MAMELEKWRKFAISF---SRSGAILQRYFLHDGPDTVEELLERHIXXXXXXXXXXXELS- 29
           MA +L+KWR  A      +RSGA+  R FLH+GPDTVEELLERH+           E   
Sbjct: 2   MAAKLQKWRNLAGRLDLMNRSGAVSTRRFLHEGPDTVEELLERHLAKKEKPIIDHDEAEF 61

Query: 28  -RRQRLTSSR 2
             R+RLTS+R
Sbjct: 62  LNRRRLTSTR 71


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