BLASTX nr result

ID: Cinnamomum24_contig00008477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00008477
         (260 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856145.2| PREDICTED: protein TIC 62, chloroplastic [Am...    61   3e-07
ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic [Vi...    60   4e-07
emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]    60   4e-07
ref|XP_010254987.1| PREDICTED: protein TIC 62, chloroplastic iso...    58   2e-06
ref|XP_010254986.1| PREDICTED: protein TIC 62, chloroplastic iso...    58   2e-06
ref|XP_009412301.1| PREDICTED: protein TIC 62, chloroplastic [Mu...    57   5e-06

>ref|XP_006856145.2| PREDICTED: protein TIC 62, chloroplastic [Amborella trichopoda]
          Length = 469

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/86 (41%), Positives = 43/86 (50%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSP++ YEDLK               PKE HV        S P     +I+VP+ S I 
Sbjct: 375 PLSPFTVYEDLKPPTSPTPTPSSGSTWPKEAHVKTAAPPEPSMPAQVGTTITVPS-SIIE 433

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
            E+ +    K RPLSPY VY DLKPP
Sbjct: 434 NEVIEAPRQKSRPLSPYTVYEDLKPP 459


>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic [Vitis vinifera]
           gi|297741413|emb|CBI32544.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 36/86 (41%), Positives = 42/86 (48%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSPY  YEDLK                +   V+   AE  S P     S+  P ++ +A
Sbjct: 374 PLSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIP-----SVLEPLSTVLA 428

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
           KE  Q E  K RPLSPY VY DLKPP
Sbjct: 429 KEAIQEEAKKTRPLSPYIVYDDLKPP 454


>emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]
          Length = 535

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 36/86 (41%), Positives = 42/86 (48%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSPY  YEDLK                +   V+   AE  S P     S+  P ++ +A
Sbjct: 395 PLSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIP-----SVLEPXSTVLA 449

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
           KE  Q E  K RPLSPY VY DLKPP
Sbjct: 450 KEAIQEEAKKTRPLSPYIVYDDLKPP 475


>ref|XP_010254987.1| PREDICTED: protein TIC 62, chloroplastic isoform X2 [Nelumbo
           nucifera]
          Length = 601

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSPY  YEDLK                +     + + E  S     Q ++S  T++   
Sbjct: 375 PLSPYIVYEDLKPPTSPTPTPSNVPGTSQARDTGSVEEELKSIVSDIQTNLSESTSTVAE 434

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
           KE  QTE+ K RPLSPY VY DL+PP
Sbjct: 435 KESIQTEMKKARPLSPYIVYDDLRPP 460



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/86 (38%), Positives = 43/86 (50%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSPY  Y+DL+                 ++H+N  +AES  +     ISI  P T+   
Sbjct: 447 PLSPYIVYDDLRPPTSPTPTPSGGP----KVHINVKQAESKPDAADVGISIPRPITADAD 502

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
            +L + EV K   LSPY VY DLKPP
Sbjct: 503 TDLAKDEVQKAGHLSPYVVYDDLKPP 528


>ref|XP_010254986.1| PREDICTED: protein TIC 62, chloroplastic isoform X1 [Nelumbo
           nucifera]
          Length = 670

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSPY  YEDLK                +     + + E  S     Q ++S  T++   
Sbjct: 375 PLSPYIVYEDLKPPTSPTPTPSNVPGTSQARDTGSVEEELKSIVSDIQTNLSESTSTVAE 434

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
           KE  QTE+ K RPLSPY VY DL+PP
Sbjct: 435 KESIQTEMKKARPLSPYIVYDDLRPP 460


>ref|XP_009412301.1| PREDICTED: protein TIC 62, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 514

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/86 (39%), Positives = 38/86 (44%)
 Frame = -3

Query: 258 PLSPYSTYEDLKXXXXXXXXXXXXXXXPKEIHVNATKAESTSNPQMTQISISVPTTSSIA 79
           PLSPY  Y DLK                KE  V   +A+S   P  T +S S  +     
Sbjct: 372 PLSPYYMYADLKPPSSPTPIPSATPGSSKEKQVEFVQAKSEPEPTSTSLSASKLSEDVAK 431

Query: 78  KELTQTEVPKPRPLSPYFVYGDLKPP 1
           KE  Q    K RPLSPY  Y DLKPP
Sbjct: 432 KEAGQVLAQKTRPLSPYTAYEDLKPP 457


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