BLASTX nr result

ID: Cinnamomum24_contig00007465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00007465
         (253 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008791847.1| PREDICTED: protein NRDE2 homolog isoform X3 ...    59   2e-06
ref|XP_008791846.1| PREDICTED: protein NRDE2 homolog isoform X2 ...    59   2e-06
ref|XP_008791845.1| PREDICTED: protein NRDE2 homolog isoform X1 ...    59   2e-06
ref|XP_006647981.1| PREDICTED: protein NRDE2 homolog isoform X1 ...    57   6e-06
ref|XP_002452899.1| hypothetical protein SORBIDRAFT_04g034590 [S...    56   8e-06

>ref|XP_008791847.1| PREDICTED: protein NRDE2 homolog isoform X3 [Phoenix dactylifera]
          Length = 1057

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
 Frame = -3

Query: 251 FPLFPLSDSSSHIKTASND-TQWLSNSSFTFDISSIQ----TPTPSSLHIDEPDE----- 102
           FPLFPLS + S    +S+  +QWLSN SFTFDISS+         +SL  D   E     
Sbjct: 32  FPLFPLSSNPSPPPPSSSTASQWLSNPSFTFDISSLPGSGGAGPVASLPQDSDSEDEAAA 91

Query: 101 ---APPSKPPTFDFLDSSPS 51
              APP++PPT+D + SSPS
Sbjct: 92  AEAAPPARPPTYDLVASSPS 111


>ref|XP_008791846.1| PREDICTED: protein NRDE2 homolog isoform X2 [Phoenix dactylifera]
          Length = 1127

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
 Frame = -3

Query: 251 FPLFPLSDSSSHIKTASND-TQWLSNSSFTFDISSIQ----TPTPSSLHIDEPDE----- 102
           FPLFPLS + S    +S+  +QWLSN SFTFDISS+         +SL  D   E     
Sbjct: 32  FPLFPLSSNPSPPPPSSSTASQWLSNPSFTFDISSLPGSGGAGPVASLPQDSDSEDEAAA 91

Query: 101 ---APPSKPPTFDFLDSSPS 51
              APP++PPT+D + SSPS
Sbjct: 92  AEAAPPARPPTYDLVASSPS 111


>ref|XP_008791845.1| PREDICTED: protein NRDE2 homolog isoform X1 [Phoenix dactylifera]
          Length = 1178

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
 Frame = -3

Query: 251 FPLFPLSDSSSHIKTASND-TQWLSNSSFTFDISSIQ----TPTPSSLHIDEPDE----- 102
           FPLFPLS + S    +S+  +QWLSN SFTFDISS+         +SL  D   E     
Sbjct: 32  FPLFPLSSNPSPPPPSSSTASQWLSNPSFTFDISSLPGSGGAGPVASLPQDSDSEDEAAA 91

Query: 101 ---APPSKPPTFDFLDSSPS 51
              APP++PPT+D + SSPS
Sbjct: 92  AEAAPPARPPTYDLVASSPS 111


>ref|XP_006647981.1| PREDICTED: protein NRDE2 homolog isoform X1 [Oryza brachyantha]
           gi|573920769|ref|XP_006647982.1| PREDICTED: protein
           NRDE2 homolog isoform X2 [Oryza brachyantha]
          Length = 1169

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
 Frame = -3

Query: 251 FPLFPLS--DSSSHIKTASNDTQWLSNSSFTFDISSIQTPTPSSLHIDEP-------DEA 99
           FPLFPLS  D+SS   T S   QWLSN SF+FD SS+  P  +S  +  P       +EA
Sbjct: 38  FPLFPLSAPDASSVPGTGS---QWLSNPSFSFDASSLNIPATTSSSVPPPLSASSDEEEA 94

Query: 98  PPSKPPTFDFLDSSPS 51
           P   P  +D L SSPS
Sbjct: 95  PRPAPAKYDLLPSSPS 110


>ref|XP_002452899.1| hypothetical protein SORBIDRAFT_04g034590 [Sorghum bicolor]
           gi|241932730|gb|EES05875.1| hypothetical protein
           SORBIDRAFT_04g034590 [Sorghum bicolor]
          Length = 1149

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
 Frame = -3

Query: 251 FPLFPLSDSSSHIKTASNDTQWLSNSSFTFDISSIQTPTPSSLHIDEP-----DEAPPSK 87
           FPLFPLS SSS   TA  ++QWLSN SF+FD SS+  P  +S  +  P     DE  P +
Sbjct: 35  FPLFPLSASSSSAPTA--ESQWLSNPSFSFDASSLNVPATTSSSLPPPLSPSSDEDTPLQ 92

Query: 86  --PPTFDFLDSSPS 51
             P  ++ + SSPS
Sbjct: 93  RAPAKYELVPSSPS 106


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