BLASTX nr result

ID: Cinnamomum24_contig00007008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00007008
         (352 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006370858.1| hypothetical protein POPTR_0019s01010g [Popu...    59   1e-06
ref|XP_002325701.2| hypothetical protein POPTR_0019s01050g, part...    58   3e-06

>ref|XP_006370858.1| hypothetical protein POPTR_0019s01010g [Populus trichocarpa]
            gi|550316428|gb|ERP48655.1| hypothetical protein
            POPTR_0019s01010g [Populus trichocarpa]
          Length = 1650

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/117 (32%), Positives = 58/117 (49%)
 Frame = -2

Query: 351  LPDIKELTIFNIPELLVLCKGIPSPDALKSLQSLSVWGCXXXXXXXXXXXXXXXXXLKMI 172
            LP ++ L +FN+PEL  +C    + D   SLQ + VW C                  K I
Sbjct: 931  LPKLRSLALFNLPELKSICSAKLTCD---SLQQIEVWNCNSMEILVPSSWISLVNLEK-I 986

Query: 171  EVAHCGQMKEIVGEEEEMGITREDDNNAMLIHSQLQSLSIFNLPELKGVYSRVLICN 1
             V  C +M+EI+G       + E+ ++      +L+SL++FNLPELK + S  L C+
Sbjct: 987  TVRGCEKMEEIIGGRR----SDEESSSTEFKLPKLRSLALFNLPELKSICSAKLTCD 1039



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/117 (32%), Positives = 58/117 (49%)
 Frame = -2

Query: 351  LPDIKELTIFNIPELLVLCKGIPSPDALKSLQSLSVWGCXXXXXXXXXXXXXXXXXLKMI 172
            LP ++ L +FN+PEL  +C    + D   SLQ + VW C                  K I
Sbjct: 1014 LPKLRSLALFNLPELKSICSAKLTCD---SLQQIEVWNCNSMEILVPSSWISLVNLEK-I 1069

Query: 171  EVAHCGQMKEIVGEEEEMGITREDDNNAMLIHSQLQSLSIFNLPELKGVYSRVLICN 1
             V  C +M+EI+G       + E+ ++      +L+SL++FNLPELK + S  L C+
Sbjct: 1070 TVRGCEKMEEIIGGRR----SDEESSSTEFKLPKLRSLALFNLPELKSICSAKLTCD 1122



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 38/117 (32%), Positives = 58/117 (49%)
 Frame = -2

Query: 351  LPDIKELTIFNIPELLVLCKGIPSPDALKSLQSLSVWGCXXXXXXXXXXXXXXXXXLKMI 172
            LP ++ L +FN+PEL  +C    + D   SLQ + VW C                  K I
Sbjct: 848  LPKLRSLALFNLPELKNICSAKLTCD---SLQKIEVWNCNSMEILVPSSWISLVNLEK-I 903

Query: 171  EVAHCGQMKEIVGEEEEMGITREDDNNAMLIHSQLQSLSIFNLPELKGVYSRVLICN 1
             V  C +M+EI+G       + E+ ++      +L+SL++FNLPELK + S  L C+
Sbjct: 904  TVRGCEKMEEIIGGRR----SDEESSSTEFKLPKLRSLALFNLPELKSICSAKLTCD 956


>ref|XP_002325701.2| hypothetical protein POPTR_0019s01050g, partial [Populus trichocarpa]
            gi|550316431|gb|EEF00083.2| hypothetical protein
            POPTR_0019s01050g, partial [Populus trichocarpa]
          Length = 1099

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
 Frame = -2

Query: 351  LPDIKELTIFNIPELLVLCKGIPSPDALKSLQSLSVWGCXXXXXXXXXXXXXXXXXLKMI 172
            LP ++ L +FN+PEL  +C    + D   SLQ + VW C                  K I
Sbjct: 972  LPKLRSLALFNLPELKSICSAKLTCD---SLQQIEVWNCNSMEILVPSSWISLVNLEK-I 1027

Query: 171  EVAHCGQMKEIVGEEEEMGITREDD----NNAMLIHSQLQSLSIFNLPELKGVYSRVLIC 4
             V+ C +MKEI+G       TR D+    NN      +L+SL++  LPELK + S  LIC
Sbjct: 1028 TVSACKKMKEIIGG------TRSDEESSSNNTEFKLPKLRSLALSWLPELKRICSAKLIC 1081

Query: 3    N 1
            +
Sbjct: 1082 D 1082


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