BLASTX nr result
ID: Cinnamomum24_contig00006591
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00006591
(1262 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro... 414 e-113
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 389 e-105
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 386 e-104
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 384 e-103
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 383 e-103
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 382 e-103
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 382 e-103
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 374 e-101
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 374 e-101
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 374 e-101
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 374 e-101
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 373 e-100
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal... 370 2e-99
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 366 2e-98
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec... 364 7e-98
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec... 363 1e-97
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec... 362 3e-97
ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation spec... 357 8e-96
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 353 2e-94
ref|XP_010100330.1| Cleavage and polyadenylation specificity fac... 350 1e-93
>ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo
nucifera]
Length = 599
Score = 414 bits (1064), Expect = e-113
Identities = 212/358 (59%), Positives = 250/358 (69%), Gaps = 2/358 (0%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MDPM EEQ+DY D+EYGGGQK+Q+QG GAI ALA+EE+MGEDDEYDDLYNDVNVG+GF++
Sbjct: 1 MDPMAEEQLDYGDEEYGGGQKIQYQGGGAISALAEEEMMGEDDEYDDLYNDVNVGDGFLK 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
R E VP + R SRVP+ QEV+IP V ++ K N+
Sbjct: 61 L--QRPEAIVPLGGIGNGGIQAQKTDGSR--SRVPEPGGSQEVSIPGVGLEGKGSNMVTG 116
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENIGFRGSVPAPPKIGP 605
FS EQK+ FS+ G EG G+Y DGVSQK ++M Q N+GFRGS P PPK+G
Sbjct: 117 FS--EQKKGGFSAGNGLEEGTGDYPDGVSQKGRPLEMGPNAQGGNLGFRGSAPIPPKVGA 174
Query: 604 DPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPT 431
DP Q GKF G SSLPD T G + M N N +P+ N+N +R +E+G T
Sbjct: 175 DPSQXSGKFAGESSSLPDSGTAGPXSAPQMPSNRMNMNVNMNRPMXNENMNRXAVENGTT 234
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTDA+LE +LSQYGRVKEIKF+DERASGKSKGYC VEFYD +AA ACKEG
Sbjct: 235 MLFVGELHWWTTDAELEXVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEG 294
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNY 77
M GH+FNGR CVVAFAS QT++QMG AY+NK Q Q Q Q GRR MNDGVGRGGG N+
Sbjct: 295 MXGHVFNGRACVVAFASXQTLKQMGAAYLNKTQMQSQSQPQGRRFMNDGVGRGGGMNH 352
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 389 bits (1000), Expect = e-105
Identities = 201/362 (55%), Positives = 243/362 (67%), Gaps = 4/362 (1%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQIDYE++EYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
++ P K D P +V Q +P V+++ K N G +
Sbjct: 61 F----QQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTH 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
F + + + G GNY DG VSQK +V + V N+GF+GS PP+
Sbjct: 116 FPAQNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRT 172
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 437
G DP MPG+ P+ + +P G + G L+ N G N+ +VN+N RP LE+G
Sbjct: 173 GVDPSNMPGRVANEPAPVLNPGAAGPQ-GALIPANQMGVNINVNRAMVNENQIRPPLENG 231
Query: 436 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACK 257
TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEF+D +AA ACK
Sbjct: 232 GTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACK 291
Query: 256 EGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNY 77
+GMNGH+FNGRPCVVAFASPQT++QMG +YMNKNQ Q Q Q GRRPMNDG GRGG NY
Sbjct: 292 DGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNY 351
Query: 76 QS 71
QS
Sbjct: 352 QS 353
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 386 bits (992), Expect = e-104
Identities = 200/362 (55%), Positives = 242/362 (66%), Gaps = 4/362 (1%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQIDYE++EYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
++ P K D P +V Q +P V+++ K N G +
Sbjct: 61 F----QQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTH 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
F + + + G GNY DG VSQK +V + V N+GF+GS P +
Sbjct: 116 FPAQNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRT 172
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 437
G DP MPG+ P+ + +P G + G L+ N G N+ +VN+N RP LE+G
Sbjct: 173 GVDPSNMPGRVANEPAPVLNPGAAGPQ-GALIPANQMGVNINVNRAMVNENQIRPPLENG 231
Query: 436 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACK 257
TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEF+D +AA ACK
Sbjct: 232 GTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACK 291
Query: 256 EGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNY 77
+GMNGH+FNGRPCVVAFASPQT++QMG +YMNKNQ Q Q Q GRRPMNDG GRGG NY
Sbjct: 292 DGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNY 351
Query: 76 QS 71
QS
Sbjct: 352 QS 353
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Vitis vinifera]
Length = 656
Score = 384 bits (985), Expect = e-103
Identities = 204/365 (55%), Positives = 248/365 (67%), Gaps = 4/365 (1%)
Frame = -2
Query: 1156 LQFQMDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGE 977
L+ MDPM EEQ+DYED+EYGG QK+ FQG GAI ALAD+ELMGEDDEYDDLYNDVNVGE
Sbjct: 3 LRAYMDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGE 62
Query: 976 GFMQSLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLN 797
GF+Q HR E P + D P ++ + T Q + IP V+++ K N
Sbjct: 63 GFLQM--HRSEAPAPSGVMAGGPFQAHKT--DVPPQKL-EAGTSQGLIIPGVSIEGKYSN 117
Query: 796 VGANFSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPA 623
+ +K+ + KG G ++ DG VSQK V++M QV N+GF+GS P
Sbjct: 118 -----PHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPI 172
Query: 622 PPKIGPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTG--TVANQPIVNDNSSRPI 449
P K G +P + GK + + + T G R M+ N G N+P+VN+N RP
Sbjct: 173 PQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPA 232
Query: 448 LESGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAA 269
+++G TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD SAA
Sbjct: 233 VDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAA 292
Query: 268 VACKEGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGG 89
ACKEGMNG++FNGR CVVAFASPQT++QMG +YMNK QAQ Q Q GRRPMNDGVGRGG
Sbjct: 293 AACKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQ--GRRPMNDGVGRGG 350
Query: 88 GSNYQ 74
G N Q
Sbjct: 351 GMNMQ 355
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185 isoform
X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 383 bits (983), Expect = e-103
Identities = 203/361 (56%), Positives = 246/361 (68%), Gaps = 4/361 (1%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MDPM EEQ+DYED+EYGG QK+ FQG GAI ALAD+ELMGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
HR E P + D P ++ + T Q + IP V+++ K N
Sbjct: 61 M--HRSEAPAPSGVMAGGPFQAHKT--DVPPQKL-EAGTSQGLIIPGVSIEGKYSN---- 111
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
+ +K+ + KG G ++ DG VSQK V++M QV N+GF+GS P P K
Sbjct: 112 -PHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKT 170
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTG--TVANQPIVNDNSSRPILESG 437
G +P + GK + + + T G R M+ N G N+P+VN+N RP +++G
Sbjct: 171 GAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNG 230
Query: 436 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACK 257
TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD SAA ACK
Sbjct: 231 ATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACK 290
Query: 256 EGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNY 77
EGMNG++FNGR CVVAFASPQT++QMG +YMNK QAQ Q Q GRRPMNDGVGRGGG N
Sbjct: 291 EGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQ--GRRPMNDGVGRGGGMNM 348
Query: 76 Q 74
Q
Sbjct: 349 Q 349
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 382 bits (982), Expect = e-103
Identities = 200/359 (55%), Positives = 241/359 (67%), Gaps = 4/359 (1%)
Frame = -2
Query: 1135 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 956
M EEQIDYE+DEYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQF-- 58
Query: 955 HRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGANFSN 776
++ P K D P RV Q IP V+++ K N G++F
Sbjct: 59 --QQPEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSHFPA 115
Query: 775 AEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKIGPD 602
+ + + G GNY DG VSQK +V + V N+GF+GS P + G D
Sbjct: 116 QNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVD 172
Query: 601 PGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPTM 428
P MPG+ P+ + +P G + G L+ N G AN + +VN+N RP LE+G TM
Sbjct: 173 PSNMPGRVANEPAPVLNPGAAGPQ-GALIPANQMGVNANVNRVMVNENQIRPPLENGGTM 231
Query: 427 LFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEGM 248
LFVGELHWWTTDA+LES+LSQYGR KEIKF+DERASGKSKGYC VEF+D +AA ACK+GM
Sbjct: 232 LFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGM 291
Query: 247 NGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
NGH+FNGRPCVVAFASPQT++QMG +YMNKNQ Q Q Q G RPMNDG GRGG +NYQS
Sbjct: 292 NGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQS 350
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 382 bits (980), Expect = e-103
Identities = 199/359 (55%), Positives = 241/359 (67%), Gaps = 4/359 (1%)
Frame = -2
Query: 1135 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 956
M EEQIDYE+DEYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYND+NVG+G +Q
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQF-- 58
Query: 955 HRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGANFSN 776
++ P K D P RV Q IP V+++ K N G++F
Sbjct: 59 --QQPEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSDFPA 115
Query: 775 AEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKIGPD 602
+ + + G GNY DG VSQK +V + V N+GF+GS P + G D
Sbjct: 116 QNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVD 172
Query: 601 PGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPTM 428
P MPG+ P+ + +P G + G L+ N G AN + +VN+N RP LE+G TM
Sbjct: 173 PSNMPGRAANEPAPVLNPGAAGPQ-GALIPANQMGVNANVNRVMVNENQIRPPLENGGTM 231
Query: 427 LFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEGM 248
LFVGELHWWTTDA+LES+LSQYGR KEIKF+DERASGKSKGYC VEF+D +AA ACK+GM
Sbjct: 232 LFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGM 291
Query: 247 NGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
NGH+FNGRPCVVAFASPQT++QMG +YMNKNQ Q Q Q G RPMNDG GRGG +NYQS
Sbjct: 292 NGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQS 350
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 374 bits (960), Expect = e-101
Identities = 193/360 (53%), Positives = 242/360 (67%), Gaps = 2/360 (0%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
+ P + ++ P RV + Q + IP V++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
+ E++ + G+Y G +SQK +V + QV+N+GF+G A K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 431
G DP +P K P+ + T G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD S+A CKEG
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEG 291
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
MNG+MFNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG NYQS
Sbjct: 292 MNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQS 350
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 374 bits (960), Expect = e-101
Identities = 193/360 (53%), Positives = 242/360 (67%), Gaps = 2/360 (0%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
+ P + ++ P RV + Q + IP V++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
+ E++ + G+Y G +SQK +V + QV+N+GF+G A K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 431
G DP +P K P+ + T G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD S+A CKEG
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEG 291
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
MNG+MFNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG NYQS
Sbjct: 292 MNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQS 350
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 374 bits (960), Expect = e-101
Identities = 193/360 (53%), Positives = 242/360 (67%), Gaps = 2/360 (0%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
+ P + ++ P RV + Q + IP V++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
+ E++ + G+Y G +SQK +V + QV+N+GF+G A K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 431
G DP +P K P+ + T G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD S+A CKEG
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEG 291
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
MNG+MFNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG NYQS
Sbjct: 292 MNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQS 350
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 374 bits (960), Expect = e-101
Identities = 193/360 (53%), Positives = 242/360 (67%), Gaps = 2/360 (0%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
+ P + ++ P RV + Q + IP V++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKI 611
+ E++ + G+Y G +SQK +V + QV+N+GF+G A K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 610 GPDPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 431
G DP +P K P+ + T G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD S+A CKEG
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEG 291
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
MNG+MFNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG NYQS
Sbjct: 292 MNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQS 350
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 373 bits (958), Expect = e-100
Identities = 194/358 (54%), Positives = 239/358 (66%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MD M EEQID+ D+EYGG QK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
+ P + ++ P R + Q + IP V++ K LNV A
Sbjct: 61 L----QRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLNVTAR 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENIGFRGSVPAPPKIGP 605
+ EQ S G G +SQK V++ + QV+N+GF+G A K+G
Sbjct: 116 YP--EQDGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGI 173
Query: 604 DPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVANQPIVNDNSSRPILESGPTML 425
DP +P K P+ + T G + + N G N P++++N RP +E+GPTML
Sbjct: 174 DPSGVPQKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTML 233
Query: 424 FVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEGMN 245
FVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD ++A ACKEGM+
Sbjct: 234 FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMD 293
Query: 244 GHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
G+MFNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP NDG+GRGG NYQS
Sbjct: 294 GYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQS 350
>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
protein FUS-like [Malus domestica]
Length = 658
Score = 370 bits (949), Expect = 2e-99
Identities = 197/362 (54%), Positives = 238/362 (65%), Gaps = 4/362 (1%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MDPMG+EQIDYED+EYGG QKLQ+QGSGAI ALADEE M EDDEYDDLYNDVNVGEGFMQ
Sbjct: 1 MDPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
HR E VP + P +R Q++ IP V++ K GA
Sbjct: 61 M--HRSEAPVPPGGVGNGGLQAQKTNVPEPRARAG---VSQDLKIPGVSVQGKYSGAGAQ 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENIGFRGSVPAPPKIGP 605
F EQ + + G G SQK V++M QV +GF+GS PP +G
Sbjct: 116 FP--EQNQPPVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGI 173
Query: 604 DPGQMPGKFVGGPSSLP--DPSTVGARNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 437
D + GK G +P +P T G + N AN+P+VN+N RP +E+G
Sbjct: 174 DSSDITGK--GNSEYIPSLNPGTAGPPGAAQIPTNQMSIKINANRPMVNENQIRPPIENG 231
Query: 436 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACK 257
MLFVGELHWWTTDA++ES LSQYGRVKEIKF+DERASGKSKGYC VEF+D +AA ACK
Sbjct: 232 SAMLFVGELHWWTTDAEIESXLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACK 291
Query: 256 EGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNY 77
EGM+G++FNGR CVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDGVGRG G N+
Sbjct: 292 EGMDGYVFNGRACVVAFASPQTLKQMGASYLSKSQXQAQAQQPGRRPMNDGVGRGAGVNF 351
Query: 76 QS 71
Q+
Sbjct: 352 QA 353
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Pyrus x bretschneideri]
Length = 656
Score = 366 bits (939), Expect = 2e-98
Identities = 196/364 (53%), Positives = 244/364 (67%), Gaps = 6/364 (1%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
M+P+GEEQIDYED+EYGG KLQ+QGSGAI ALADEELM EDDE+DDLYNDVNVGEGFMQ
Sbjct: 1 MEPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEELMVEDDEFDDLYNDVNVGEGFMQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
HR E +P + D P RV + Q++ IP V++ K GA
Sbjct: 61 M--HRSEAPLPTGGVGNGGLQAQKT--DVPEPRV-QSGVSQDLKIPGVSVQGKYSGAGAQ 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADGVS--QKATVVDMARGNQVENIGFRGSVPAPPKI 611
F EQ + + G G YA G S QK V+DM QV ++ F+GS PP +
Sbjct: 116 FP--EQNQPPVAKEPELGSTG--YASGASGSQKGRVMDMTHDTQVRHMAFQGSTTMPPNV 171
Query: 610 GPDPGQMPGKFVGGPSSLP--DPSTVGARNGHLMVVNPTGTV--ANQPIVNDNSSRPILE 443
G D + GK G +P +P++ G + N AN+P+VN+N RP +E
Sbjct: 172 GVDSSDITGK--GNSEFVPSLNPASAGPPGATQIPTNQMSIKINANRPMVNENQIRPPIE 229
Query: 442 SGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVA 263
+G LFVGELHWWTTDA++ES++SQYGRVKEIKF+DERASGKSKGYC VEF+D +AA A
Sbjct: 230 NGSATLFVGELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATA 289
Query: 262 CKEGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 83
CKEGM+G++FNGR CVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDG GRGGG
Sbjct: 290 CKEGMDGYVFNGRACVVAFASPQTLKQMGASYLSKSQGQAQAQQPGRRPMNDGGGRGGGV 349
Query: 82 NYQS 71
N+Q+
Sbjct: 350 NFQA 353
>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like [Jatropha curcas]
gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|643714049|gb|KDP26714.1|
hypothetical protein JCGZ_17872 [Jatropha curcas]
Length = 656
Score = 364 bits (935), Expect = 7e-98
Identities = 193/361 (53%), Positives = 238/361 (65%), Gaps = 7/361 (1%)
Frame = -2
Query: 1135 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 956
M +EQIDYED+EYGG QK+Q+QGSGAIPALA+EE MGEDDEYDDLYNDVNVGE F+Q
Sbjct: 1 MADEQIDYEDEEYGGNQKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQM-- 57
Query: 955 HRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGANFSN 776
H+ ++ P + + +T Q + IP VA++ K + G +F
Sbjct: 58 HQSQVPPPPTSVGSGGFQTQNVNESKV-----ETGGSQGLKIPEVAVEGKYSDPGTHFP- 111
Query: 775 AEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKIGPD 602
+ + KG G Y+DG ++QK V++M Q NIGF GS P IG D
Sbjct: 112 --EPKDVPMGVKGPEMGSVAYSDGSSIAQKGRVMEMTHDAQARNIGFHGSSSVPSNIGVD 169
Query: 601 PGQMPGKFVGGPSSLPDPSTVGARN-----GHLMVVNPTGTVANQPIVNDNSSRPILESG 437
P M K P+ +P+ + G R G+ + +N N+P VN+N RP +E+G
Sbjct: 170 PSDMSRKTANEPAPVPNTAATGPRGMPQLPGNQISINMD---VNRPTVNENQIRPPVENG 226
Query: 436 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACK 257
T+LFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKG+C VEFYD +AA ACK
Sbjct: 227 STVLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGFCQVEFYDAAAAAACK 286
Query: 256 EGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNY 77
EGMNGH+FNGRPCVVAFASPQT++QMG +YMNK Q Q Q Q GRRPMNDG GRG NY
Sbjct: 287 EGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQSQTQNQGRRPMNDGAGRGDNMNY 346
Query: 76 Q 74
Q
Sbjct: 347 Q 347
>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas] gi|802723858|ref|XP_012085541.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like [Jatropha curcas]
gi|643714040|gb|KDP26705.1| hypothetical protein
JCGZ_17863 [Jatropha curcas]
Length = 651
Score = 363 bits (933), Expect = 1e-97
Identities = 197/360 (54%), Positives = 239/360 (66%), Gaps = 6/360 (1%)
Frame = -2
Query: 1135 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 956
M +EQIDYED+EYGG QK+Q+QGSGAIPALA+EE MGEDDEYDDLYNDVNVGE F+Q
Sbjct: 1 MADEQIDYEDEEYGGAQKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQM-- 57
Query: 955 HRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGANFSN 776
H+ E+ P + R G T Q + IP ++ K NV +F
Sbjct: 58 HQSEVPPPTTSISSGGFQAQNVNEPRVG-----TGGSQGLNIPGGVVEGKYSNVETHFP- 111
Query: 775 AEQKRSSFSSAKGFGEGGGNYADG-VSQKATVVDMARGNQVENIGFRGSVPAPPKIGPDP 599
EQK AKG G Y DG V+QK V+++ +Q NIGF+GS P + DP
Sbjct: 112 -EQKEVPMG-AKGAEMGSVGYPDGSVTQKGRVMEVTHDSQARNIGFQGSSSVPSNVVVDP 169
Query: 598 GQMPGKFVGGPSSLPDPSTVGARN-----GHLMVVNPTGTVANQPIVNDNSSRPILESGP 434
M K P+ +P+ S G R G+ + +N N+P +N+N RP +E+G
Sbjct: 170 SDMSRKIPNEPAPVPNTSISGPRGIQQLPGNQISINID---VNRPGMNENQIRPPVENGS 226
Query: 433 TMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKE 254
T+LFVGELHWWTTDA+LES+LSQYG+VKEIKF+DERASGKSKG+C VEFYD +AA ACKE
Sbjct: 227 TVLFVGELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKE 286
Query: 253 GMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQ 74
GMNGH+FNGRPCVVAFASPQT++QMG +YMNK Q Q Q Q RRPMNDGVGRGG NYQ
Sbjct: 287 GMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQPQTQNQARRPMNDGVGRGGNMNYQ 346
>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Prunus mume]
Length = 647
Score = 362 bits (930), Expect = 3e-97
Identities = 195/360 (54%), Positives = 236/360 (65%), Gaps = 2/360 (0%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MDPM EEQIDYED+EYGG QKLQ+QGSGAI ALADEE M EDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
HR E +P + D +RV QE IP V++ K + A
Sbjct: 61 M--HRSEAPLPPGGVGNGGLQAQKT--DVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQ 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENIGFRGSVPAPPKIGP 605
F +Q + + G G SQK ++M+ QV ++GF+GS PP IG
Sbjct: 116 FPE-QQDQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGG 174
Query: 604 DPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTV--ANQPIVNDNSSRPILESGPT 431
D + GK + T G M N AN+P+ N+N RP +E+G T
Sbjct: 175 DSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQVRPTVENGST 234
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTD++LES+LSQYGRVKEIKF+DERASGKSKGYC VEF+D +AA ACKEG
Sbjct: 235 MLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEG 294
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
M+G++FNGR CVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDGVGRGGG NYQ+
Sbjct: 295 MDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNDGVGRGGGVNYQT 354
>ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 656
Score = 357 bits (917), Expect = 8e-96
Identities = 192/364 (52%), Positives = 240/364 (65%), Gaps = 6/364 (1%)
Frame = -2
Query: 1144 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 965
MDP+GEEQIDYED+EYGG KLQ+QGSGAI ALADEE M EDDE+DDLYNDVNVGEGFMQ
Sbjct: 1 MDPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEEPMVEDDEFDDLYNDVNVGEGFMQ 60
Query: 964 SLNHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGAN 785
HR E S+P + D P RV Q++ IP V++ K GA
Sbjct: 61 M--HRSEASLPTGGVGNGGLQAQKT--DVPEPRV-QAGVSQDLKIPGVSVQGKYSGAGAQ 115
Query: 784 FSNAEQKRSSFSSAKGFGEGGGNYADGVS--QKATVVDMARGNQVENIGFRGSVPAPPKI 611
F Q AK G +Y G S QK V++M QV ++ F+GS PP +
Sbjct: 116 FPEQNQP----PVAKEPELGSTDYVSGASGSQKGRVMEMTHDPQVRHMAFQGSTTMPPNV 171
Query: 610 GPDPGQMPGKFVGGPSSLP--DPSTVGARNGHLMVVNPTGTV--ANQPIVNDNSSRPILE 443
G D + GK G +P +P++ G ++ N AN+P+VN+N RP +E
Sbjct: 172 GVDSSDITGK--GNSEFVPSLNPASAGPPGATQILTNQMSIKINANRPMVNENQIRPPIE 229
Query: 442 SGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVA 263
+G LFVGELHWWTTDA++ES++SQYGRVKEIKF+DERASGKSKGYC VEF+D +AA A
Sbjct: 230 NGSATLFVGELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATA 289
Query: 262 CKEGMNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 83
CKEGM+G++FNGR CV A+ASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDG GRG G
Sbjct: 290 CKEGMDGYVFNGRACVXAYASPQTLKQMGASYLSKSQGQAQAQQPGRRPMNDGGGRGXGV 349
Query: 82 NYQS 71
N+Q+
Sbjct: 350 NFQA 353
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 353 bits (906), Expect = 2e-94
Identities = 192/359 (53%), Positives = 231/359 (64%), Gaps = 5/359 (1%)
Frame = -2
Query: 1135 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 956
M +EQIDYED+EYGG QKLQ+QGSGAIPALA+EE MGEDDEYDDLYNDVN+GE F+Q
Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQM-- 57
Query: 955 HRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGANFSN 776
HR E D R ++ Q + IP VA++SK + G +F
Sbjct: 58 HRSEAPPAPPSVGNGGFQPRNSNDLRV-----ESGGSQGLNIPGVAVESK-YSTGTHFPE 111
Query: 775 AEQKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENIGFRGSVPAPPKIGPD 602
+ KG G Y DG ++QK V++M +Q N+GF+GS P IG D
Sbjct: 112 --------QNVKGPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVD 163
Query: 601 PGQMPGKFVGGPSSLPD---PSTVGARNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 431
P M K P+ +P+ P + M +N N+ N+N RP LE+G T
Sbjct: 164 PSDMNNKISNDPTPVPNAGVPRVIPQLPASQMNMNMD---TNRSATNENQIRPPLENGST 220
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
ML+VGELHWWTTDA+LE++LSQYG VKEIKF+DERASGKSKGYC VEFYD +AA ACKEG
Sbjct: 221 MLYVGELHWWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEG 280
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQ 74
MNGH+FNGR CVVAFAS QT++QMG +YMNKNQ Q Q Q GRRPMNDG GRGG NYQ
Sbjct: 281 MNGHLFNGRACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQ 339
>ref|XP_010100330.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis] gi|587893932|gb|EXB82464.1| Cleavage and
polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 350 bits (899), Expect = 1e-93
Identities = 192/360 (53%), Positives = 232/360 (64%), Gaps = 5/360 (1%)
Frame = -2
Query: 1135 MGEEQIDYEDDEYGGGQKLQFQGSG-AIPALADEELMGEDDEYDDLYNDVNVGEGFMQSL 959
M E+ ID+ED+EYGG QK Q+QGSG AI ALADEELMG+DDEYDDLYNDVNVGEGF+Q L
Sbjct: 1 MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQ-L 59
Query: 958 NHRKEMSVPXXXXXXXXXXXXQKIDDRPGSRVPDTRTPQEVTIPSVAMDSKSLNVGANFS 779
+ S+P ++ P + ++ P IP V+ + + + G+ F
Sbjct: 60 QRSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPN---IPGVSAEGRFSSAGSQFP 116
Query: 778 NAEQKRSSFSSAKGFGEGGGNYADGVS--QKATVVDMARGNQVENIGFRGSVPAPPKIGP 605
++ K G Y DG S QK +V GF+GS P +G
Sbjct: 117 G---QQDGLKVDKKSEAGSMVYPDGASGSQKGRIV----------AGFQGSKPMLHSVGV 163
Query: 604 DPGQMPGKFVGGPSSLPDPSTVGARNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPT 431
D +PGK V P P+ G R M N T AN PIVN+N RP +E+G T
Sbjct: 164 DSSDIPGKMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGST 223
Query: 430 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYDTSAAVACKEG 251
MLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VE+YD +AAVACKEG
Sbjct: 224 MLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEG 283
Query: 250 MNGHMFNGRPCVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGSNYQS 71
M+GH+FNGR CVVAFASPQT++QMG AYM+KNQ Q Q Q GRRP+NDGVGRGG N+QS
Sbjct: 284 MHGHVFNGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQS 343