BLASTX nr result
ID: Cinnamomum24_contig00004379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00004379
(256 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Iso... 112 9e-23
gb|AAK82460.1| type 2 ribosome-inactivating protein cinnamomin I... 112 9e-23
gb|AAK82459.1| type 2 ribosome-inactivating protein cinnamomin I... 112 1e-22
gb|AAF68978.2|AF259548_1 type II ribosome-inactivating protein c... 111 2e-22
gb|AAK82458.1| type 2 ribosome-inactivating protein cinnamomin I... 111 2e-22
gb|AET98835.1| type 2 ribosome-inactivating protein [Cinnamomum ... 97 3e-18
gb|ABW23506.1| prepropulchellin IV [Abrus pulchellus subsp. tenu... 74 4e-11
gb|ABW23503.1| prepropulchellin I [Abrus pulchellus subsp. tenui... 74 4e-11
pir||B39761 abrin (clone 3.7) precursor - Indian licorice (fragm... 70 7e-10
sp|Q06076.1|ABRD_ABRPR RecName: Full=Abrin-d; Contains: RecName:... 69 1e-09
sp|P28590.1|ABRC_ABRPR RecName: Full=Abrin-c; Contains: RecName:... 69 1e-09
gb|AAX10106.1| prepropulchellin [Abrus pulchellus subsp. tenuifl... 69 2e-09
gb|ABW23505.1| prepropulchellin III [Abrus pulchellus subsp. ten... 69 2e-09
gb|ABW23504.1| prepropulchellin II [Abrus pulchellus subsp. tenu... 69 2e-09
gb|AAL77434.1| abrin isoform G precursor [Abrus precatorius] 69 2e-09
emb|CAA38654.1| ricin A-chain type 72 [Abrus precatorius] 67 3e-09
sp|Q06077.1|ABRB_ABRPR RecName: Full=Abrin-b; Contains: RecName:... 67 6e-09
sp|P11140.2|ABRA_ABRPR RecName: Full=Abrin-a; Contains: RecName:... 66 8e-09
gb|AAA32624.1| abrin-a, partial [Abrus precatorius] 66 8e-09
gb|AEI01157.1| mutant abrin A chain E164AR167LN200P [synthetic c... 65 1e-08
>pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Isoform Iii)
gi|223365706|pdb|2VLC|B Chain B, Crystal Structure Of
Natural Cinnamomin (Isoform Iii)
Length = 570
Score = 112 bits (280), Expect = 9e-23
Identities = 54/81 (66%), Positives = 67/81 (82%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
+R DPAM+SLEN W ALS+A+Q+S QGGVFSS V + I N PVYVGSVS ISGLA+M
Sbjct: 210 FRPDPAMLSLENKWSALSNAVQQSNQGGVFSSPVELRSISNKPVYVGSVSDRVISGLAIM 269
Query: 75 LFVCKSSNPASSNRFIDHLLM 13
LF+C+S++ ASS++FIDHLLM
Sbjct: 270 LFICRSTDRASSDQFIDHLLM 290
>gb|AAK82460.1| type 2 ribosome-inactivating protein cinnamomin III precursor
[Cinnamomum camphora]
Length = 580
Score = 112 bits (280), Expect = 9e-23
Identities = 54/81 (66%), Positives = 67/81 (82%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
+R DPAM+SLEN W ALS+A+Q+S QGGVFSS V + I N PVYVGSVS ISGLA+M
Sbjct: 220 FRPDPAMLSLENKWSALSNAVQQSNQGGVFSSPVELRSISNKPVYVGSVSDRVISGLAIM 279
Query: 75 LFVCKSSNPASSNRFIDHLLM 13
LF+C+S++ ASS++FIDHLLM
Sbjct: 280 LFICRSTDRASSDQFIDHLLM 300
>gb|AAK82459.1| type 2 ribosome-inactivating protein cinnamomin II precursor
[Cinnamomum camphora]
Length = 580
Score = 112 bits (279), Expect = 1e-22
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
+R DPAM+SLEN W ALS+A+Q+S QGGVFSS V + I N PVYVGSVS ISGLA+M
Sbjct: 220 FRPDPAMLSLENKWSALSNAVQQSNQGGVFSSPVELRSISNKPVYVGSVSDRVISGLAIM 279
Query: 75 LFVCKSSNPASSNRFIDHLLM 13
LF+C+SS+ SS++FIDHLLM
Sbjct: 280 LFICRSSDRTSSDQFIDHLLM 300
>gb|AAF68978.2|AF259548_1 type II ribosome-inactivating protein cinnamomin [Cinnamomum
camphora]
Length = 549
Score = 111 bits (278), Expect = 2e-22
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
+R DPAM+SLEN W ALS+A+Q+S QGGVFSS V + I N PVYVGSVS ISGLA+M
Sbjct: 188 FRPDPAMLSLENKWSALSNAVQQSNQGGVFSSPVELRSISNKPVYVGSVSDRVISGLAIM 247
Query: 75 LFVCKSSNPASSNRFIDHLLM 13
LF+C+S++ ASS++FIDH+LM
Sbjct: 248 LFICRSTDRASSDQFIDHMLM 268
>gb|AAK82458.1| type 2 ribosome-inactivating protein cinnamomin I precursor
[Cinnamomum camphora]
Length = 581
Score = 111 bits (278), Expect = 2e-22
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
+R DPAM+SLEN W ALS+A+Q+S QGGVFSS V + I N PVYVGSVS ISGLA+M
Sbjct: 220 FRPDPAMLSLENKWSALSNAVQQSNQGGVFSSPVELRSISNKPVYVGSVSDRVISGLAIM 279
Query: 75 LFVCKSSNPASSNRFIDHLLM 13
LF+C+S++ ASS++FIDH+LM
Sbjct: 280 LFICRSTDRASSDQFIDHMLM 300
>gb|AET98835.1| type 2 ribosome-inactivating protein [Cinnamomum camphora]
Length = 585
Score = 97.4 bits (241), Expect = 3e-18
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = -2
Query: 246 DPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALMLFV 67
DPAM LEN W+ LS A+Q+S QGGVFS V + NNPV V SVSH ISGLA+MLF
Sbjct: 229 DPAMRRLENKWKKLSKAVQESNQGGVFSRPVELRSRSNNPVNVDSVSHPVISGLAIMLFS 288
Query: 66 CKSSNPASSNRFIDHLLM 13
C+SS+ ASS++FIDHLL+
Sbjct: 289 CRSSDRASSDQFIDHLLI 306
>gb|ABW23506.1| prepropulchellin IV [Abrus pulchellus subsp. tenuiflorus]
Length = 561
Score = 73.9 bits (180), Expect = 4e-11
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAMISLENNW+ LS+ +Q+S Q F +EV + I+N PV V S+SH ++ LALM
Sbjct: 218 FQPDPAMISLENNWDNLSAGVQRSVQD-TFPNEVTLRSINNRPVIVDSLSHPTVAVLALM 276
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 277 LFVC---NPPNANQ 287
>gb|ABW23503.1| prepropulchellin I [Abrus pulchellus subsp. tenuiflorus]
Length = 562
Score = 73.9 bits (180), Expect = 4e-11
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAMISLENNW+ LS+ +Q+S Q F +EV + I+N PV V S+SH ++ LALM
Sbjct: 218 FQPDPAMISLENNWDNLSAGVQRSVQD-TFPNEVTLRSINNRPVIVDSLSHPTVAVLALM 276
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 277 LFVC---NPPNANQ 287
>pir||B39761 abrin (clone 3.7) precursor - Indian licorice (fragment)
Length = 106
Score = 69.7 bits (169), Expect = 7e-10
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAMISLENNW+ LS +Q+S Q G F V + I N PV V S+SH ++ LALM
Sbjct: 40 FQPDPAMISLENNWDNLSGGVQQSVQ-GTFPHPVTLRNICNEPVIVDSLSHPTVAVLALM 98
Query: 75 LFVCKSSN 52
LFVC N
Sbjct: 99 LFVCNPPN 106
>sp|Q06076.1|ABRD_ABRPR RecName: Full=Abrin-d; Contains: RecName: Full=Abrin-d A chain;
AltName: Full=rRNA N-glycosidase; Contains: RecName:
Full=Linker peptide; Contains: RecName: Full=Abrin-d B
chain; Flags: Precursor [Abrus precatorius]
gi|166299|gb|AAA32626.1| abrin-d, partial [Abrus
precatorius]
Length = 528
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAM+SLENNW+ LS +Q+S Q F + V++ I+ PV V S+SH ++ LALM
Sbjct: 185 FQPDPAMLSLENNWDNLSGGVQQSVQDA-FPNNVILSSINRQPVVVDSLSHPTVAVLALM 243
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 244 LFVC---NPPNANQ 254
>sp|P28590.1|ABRC_ABRPR RecName: Full=Abrin-c; Contains: RecName: Full=Abrin-c A chain;
AltName: Full=rRNA N-glycosidase; Contains: RecName:
Full=Linker peptide; Contains: RecName: Full=Abrin-c B
chain; Flags: Precursor [Abrus precatorius]
gi|16085|emb|CAA39202.1| preproabrin [Abrus precatorius]
Length = 562
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAM+SLENNW+ LS +Q+S Q F + V++ I+ PV V S+SH ++ LALM
Sbjct: 219 FQPDPAMLSLENNWDNLSGGVQQSVQD-TFPNNVILSSINRQPVVVDSLSHPTVAVLALM 277
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 278 LFVC---NPPNANQ 288
>gb|AAX10106.1| prepropulchellin [Abrus pulchellus subsp. tenuiflorus]
Length = 364
Score = 68.6 bits (166), Expect = 2e-09
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAM+SLENNW+ LS +Q+S Q F + V++ I+ PV V S+SH ++ LALM
Sbjct: 219 FQPDPAMLSLENNWDNLSGGVQQSVQD-TFPNNVILSSINRQPVVVDSLSHPTLAVLALM 277
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 278 LFVC---NPPNANQ 288
>gb|ABW23505.1| prepropulchellin III [Abrus pulchellus subsp. tenuiflorus]
Length = 561
Score = 68.6 bits (166), Expect = 2e-09
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAM+SLENNW+ LS +Q+S Q F + V++ I+ PV V S+SH ++ LALM
Sbjct: 218 FQPDPAMLSLENNWDNLSGGVQQSVQD-TFPNNVILSSINRQPVVVDSLSHPTLAVLALM 276
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 277 LFVC---NPPNANQ 287
>gb|ABW23504.1| prepropulchellin II [Abrus pulchellus subsp. tenuiflorus]
Length = 563
Score = 68.6 bits (166), Expect = 2e-09
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAM+SLENNW+ LS +Q+S Q F + V++ I+ PV V S+SH ++ LALM
Sbjct: 219 FQPDPAMLSLENNWDNLSGGVQQSVQD-TFPNNVILSSINRQPVVVDSLSHPTLAVLALM 277
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 278 LFVC---NPPNANQ 288
>gb|AAL77434.1| abrin isoform G precursor [Abrus precatorius]
Length = 382
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAMISLENNW LS +Q++TQ F ++V + I + PV V S+SH ++ LALM
Sbjct: 39 FQPDPAMISLENNWGRLSGGVQQATQD-TFPNDVTLRNIRDEPVIVNSLSHPTVAVLALM 97
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 98 LFVC---NPPNANQ 108
>emb|CAA38654.1| ricin A-chain type 72 [Abrus precatorius]
Length = 252
Score = 67.4 bits (163), Expect = 3e-09
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ DPAM+SLENNW+ LS +Q+S Q F + V + ++N PV V S++H +++ LALM
Sbjct: 186 FQPDPAMLSLENNWDNLSRGVQESVQD-TFPNAVTLRRVNNQPVIVDSLTHQSVAVLALM 244
Query: 75 LFVCKSSN 52
LFVC N
Sbjct: 245 LFVCNPPN 252
>sp|Q06077.1|ABRB_ABRPR RecName: Full=Abrin-b; Contains: RecName: Full=Abrin-b A chain;
AltName: Full=rRNA N-glycosidase; Contains: RecName:
Full=Linker peptide; Contains: RecName: Full=Abrin-b B
chain; Flags: Precursor [Abrus precatorius]
gi|166297|gb|AAA32625.1| abrin-b, partial [Abrus
precatorius]
Length = 527
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ D AMISLENNW+ LS +Q+S Q F + V + ++N PV V S++H +++ LALM
Sbjct: 184 FQPDAAMISLENNWDNLSGGVQQSVQD-TFPNAVTLRSVNNQPVIVDSLTHQSVAVLALM 242
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 243 LFVC---NPPNANQ 253
>sp|P11140.2|ABRA_ABRPR RecName: Full=Abrin-a; Contains: RecName: Full=Abrin-a A chain;
AltName: Full=rRNA N-glycosidase; Contains: RecName:
Full=Linker peptide; Contains: RecName: Full=Abrin-a B
chain; Flags: Precursor [Abrus precatorius]
Length = 528
Score = 66.2 bits (160), Expect = 8e-09
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ D AMISLENNW+ LS +Q+S Q F ++V + I N PV V S+SH ++ LALM
Sbjct: 185 FQPDAAMISLENNWDNLSRGVQESVQD-TFPNQVTLTNIRNEPVIVDSLSHPTVAVLALM 243
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 244 LFVC---NPPNANQ 254
>gb|AAA32624.1| abrin-a, partial [Abrus precatorius]
Length = 528
Score = 66.2 bits (160), Expect = 8e-09
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ D AMISLENNW+ LS +Q+S Q F ++V + I N PV V S+SH ++ LALM
Sbjct: 185 FQPDAAMISLENNWDNLSRGVQESVQD-TFPNQVTLTNIRNEPVIVDSLSHPTVAVLALM 243
Query: 75 LFVCKSSNPASSNR 34
LFVC NP ++N+
Sbjct: 244 LFVC---NPPNANQ 254
>gb|AEI01157.1| mutant abrin A chain E164AR167LN200P [synthetic construct]
Length = 251
Score = 65.5 bits (158), Expect = 1e-08
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = -2
Query: 255 WRADPAMISLENNWEALSSAIQKSTQGGVFSSEVVIHLIDNNPVYVGSVSHGAISGLALM 76
++ D AMISLENNW+ LS +Q+S Q F ++V + I N PV V S+SH ++ LALM
Sbjct: 185 FQPDAAMISLENNWDPLSRGVQESVQD-TFPNQVTLTNIRNEPVIVDSLSHPTVAVLALM 243
Query: 75 LFVCKSSN 52
LFVC N
Sbjct: 244 LFVCNPPN 251