BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00004293
         (2614 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256146.1| PREDICTED: multisubstrate pseudouridine synt...   914   0.0  
ref|XP_010256145.1| PREDICTED: multisubstrate pseudouridine synt...   907   0.0  
ref|XP_010259121.1| PREDICTED: multisubstrate pseudouridine synt...   872   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   868   0.0  
ref|XP_010259120.1| PREDICTED: multisubstrate pseudouridine synt...   863   0.0  
ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   863   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              859   0.0  
ref|XP_008789997.1| PREDICTED: multisubstrate pseudouridine synt...   855   0.0  
ref|XP_011032429.1| PREDICTED: multisubstrate pseudouridine synt...   853   0.0  
ref|XP_009364526.1| PREDICTED: multisubstrate pseudouridine synt...   853   0.0  
ref|XP_008218239.1| PREDICTED: multisubstrate pseudouridine synt...   853   0.0  
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   851   0.0  
ref|XP_012089238.1| PREDICTED: multisubstrate pseudouridine synt...   848   0.0  
ref|XP_008388664.1| PREDICTED: multisubstrate pseudouridine synt...   848   0.0  
ref|XP_012492855.1| PREDICTED: pseudouridylate synthase 7 homolo...   846   0.0  
ref|XP_012492856.1| PREDICTED: pseudouridylate synthase 7 homolo...   845   0.0  
ref|XP_009587531.1| PREDICTED: multisubstrate pseudouridine synt...   845   0.0  
ref|XP_010938307.1| PREDICTED: pseudouridylate synthase 7 homolo...   843   0.0  
ref|XP_008370684.1| PREDICTED: multisubstrate pseudouridine synt...   843   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   843   0.0  

>ref|XP_010256146.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X2
            [Nelumbo nucifera]
          Length = 696

 Score =  914 bits (2361), Expect = 0.0
 Identities = 484/753 (64%), Positives = 548/753 (72%), Gaps = 3/753 (0%)
 Frame = -2

Query: 2481 MKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEK 2302
            M TL+E+DVGI  YISQLPGFRGVLKQRYSDFIVNEVD DGNVVHLT  D P E +EE++
Sbjct: 1    MTTLEEADVGIYSYISQLPGFRGVLKQRYSDFIVNEVDSDGNVVHLTCLDAPQENVEEKQ 60

Query: 2301 KAQVFDSTANK--SYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDK 2128
              +  + +  K  +Y  EIE FR++AGD+DAESLK F+++I  G ESD+SPIVLSPD DK
Sbjct: 61   MIKEKEDSVQKEKNYTSEIELFRALAGDSDAESLKAFVNQITSGVESDVSPIVLSPDSDK 120

Query: 2127 LHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDS 1948
             HRT VHNFFKE FKFLVTDTLDG D T KCIRVR C                     D 
Sbjct: 121  SHRTAVHNFFKEHFKFLVTDTLDGPDDTSKCIRVRLCSGGQHSNGRNSRKRK------DR 174

Query: 1947 TQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRS 1768
              KPFDSRGSNDWP+ VGKFLRFHL KENKDTQEALGLIGKMLG+QQRSFGFAGTKDKRS
Sbjct: 175  NDKPFDSRGSNDWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRS 234

Query: 1767 VSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSE 1588
            VSTQRVT+FKQHAKRLAALNDRL GIKVGDFC+           GNRFTITLRGVVADSE
Sbjct: 235  VSTQRVTIFKQHAKRLAALNDRLIGIKVGDFCHVDEELVLGRLLGNRFTITLRGVVADSE 294

Query: 1587 DIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAA 1408
            D I+ A D LG+ GFINY+GLQRFGSGSVPTHL+GA LLRGEWK+AVG+ILDPREGER A
Sbjct: 295  DTIKAAVDALGKKGFINYYGLQRFGSGSVPTHLIGATLLRGEWKTAVGMILDPREGEREA 354

Query: 1407 IMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 1228
            I +AREY+KESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS
Sbjct: 355  IWKAREYYKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 414

Query: 1227 YQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSI 1048
            YQSYLWNHAAS R+QK+G DHVV+GDLVY+KG S     E +N E E DS +   D S +
Sbjct: 415  YQSYLWNHAASMRLQKHGIDHVVIGDLVYNKGGSTGMPTEAVNIEFEVDSCNEAFDSSHL 474

Query: 1047 TELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKK 868
             E++E+ L +E+  +VKAVNAEDL  G YTI DV LPLPGSRVLYPTNDIA+VYHDLAKK
Sbjct: 475  NEITESTLPKEQDNNVKAVNAEDLQSGGYTIADVTLPLPGSRVLYPTNDIAQVYHDLAKK 534

Query: 867  DGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSK 688
            D I L E +H+ KEFS+  MTG YR+VFQ+PIDFEWE+L+Y D N+PLAETD+DAIAK K
Sbjct: 535  DSINLAECVHNVKEFSITSMTGGYRQVFQKPIDFEWELLQYTDGNVPLAETDLDAIAKKK 594

Query: 687  PV-SVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAF 511
            P  +V EE F +      L +C+V   +   N +++      +E                
Sbjct: 595  PAHNVKEEGFTDSSQ---LKICSVDYEKQSMNSKDEKIQTCNSE---------------- 635

Query: 510  ADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALK 331
                                            AE+ +E  L +  S    D Q  Q+ALK
Sbjct: 636  --------------------------------AENGKEMGLSEGDSLHICDAQKPQMALK 663

Query: 330  LSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
            L FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 664  LGFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 696


>ref|XP_010256145.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1
            [Nelumbo nucifera]
          Length = 701

 Score =  907 bits (2345), Expect = 0.0
 Identities = 484/758 (63%), Positives = 548/758 (72%), Gaps = 8/758 (1%)
 Frame = -2

Query: 2481 MKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEK 2302
            M TL+E+DVGI  YISQLPGFRGVLKQRYSDFIVNEVD DGNVVHLT  D P E +EE++
Sbjct: 1    MTTLEEADVGIYSYISQLPGFRGVLKQRYSDFIVNEVDSDGNVVHLTCLDAPQENVEEKQ 60

Query: 2301 KAQVFDSTANK--SYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDK 2128
              +  + +  K  +Y  EIE FR++AGD+DAESLK F+++I  G ESD+SPIVLSPD DK
Sbjct: 61   MIKEKEDSVQKEKNYTSEIELFRALAGDSDAESLKAFVNQITSGVESDVSPIVLSPDSDK 120

Query: 2127 LHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDS 1948
             HRT VHNFFKE FKFLVTDTLDG D T KCIRVR C                     D 
Sbjct: 121  SHRTAVHNFFKEHFKFLVTDTLDGPDDTSKCIRVRLCSGGQHSNGRNSRKRK------DR 174

Query: 1947 TQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQ-----QRSFGFAGT 1783
              KPFDSRGSNDWP+ VGKFLRFHL KENKDTQEALGLIGKMLG+Q     QRSFGFAGT
Sbjct: 175  NDKPFDSRGSNDWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQLCFWQQRSFGFAGT 234

Query: 1782 KDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGV 1603
            KDKRSVSTQRVT+FKQHAKRLAALNDRL GIKVGDFC+           GNRFTITLRGV
Sbjct: 235  KDKRSVSTQRVTIFKQHAKRLAALNDRLIGIKVGDFCHVDEELVLGRLLGNRFTITLRGV 294

Query: 1602 VADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPRE 1423
            VADSED I+ A D LG+ GFINY+GLQRFGSGSVPTHL+GA LLRGEWK+AVG+ILDPRE
Sbjct: 295  VADSEDTIKAAVDALGKKGFINYYGLQRFGSGSVPTHLIGATLLRGEWKTAVGMILDPRE 354

Query: 1422 GERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM 1243
            GER AI +AREY+KESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM
Sbjct: 355  GEREAIWKAREYYKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM 414

Query: 1242 MYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGI 1063
            MYVHSYQSYLWNHAAS R+QK+G DHVV+GDLVY+KG S     E +N E E DS +   
Sbjct: 415  MYVHSYQSYLWNHAASMRLQKHGIDHVVIGDLVYNKGGSTGMPTEAVNIEFEVDSCNEAF 474

Query: 1062 DYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYH 883
            D S + E++E+ L +E+  +VKAVNAEDL  G YTI DV LPLPGSRVLYPTNDIA+VYH
Sbjct: 475  DSSHLNEITESTLPKEQDNNVKAVNAEDLQSGGYTIADVTLPLPGSRVLYPTNDIAQVYH 534

Query: 882  DLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDA 703
            DLAKKD I L E +H+ KEFS+  MTG YR+VFQ+PIDFEWE+L+Y D N+PLAETD+DA
Sbjct: 535  DLAKKDSINLAECVHNVKEFSITSMTGGYRQVFQKPIDFEWELLQYTDGNVPLAETDLDA 594

Query: 702  IAKSKPV-SVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNV 526
            IAK KP  +V EE F +      L +C+V   +   N +++      +E           
Sbjct: 595  IAKKKPAHNVKEEGFTDSSQ---LKICSVDYEKQSMNSKDEKIQTCNSE----------- 640

Query: 525  IEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSS 346
                                                 AE+ +E  L +  S    D Q  
Sbjct: 641  -------------------------------------AENGKEMGLSEGDSLHICDAQKP 663

Query: 345  QIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
            Q+ALKL FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 664  QMALKLGFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 701


>ref|XP_010259121.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
            [Nelumbo nucifera]
          Length = 734

 Score =  872 bits (2253), Expect = 0.0
 Identities = 473/789 (59%), Positives = 546/789 (69%), Gaps = 2/789 (0%)
 Frame = -2

Query: 2595 KVLTFPPSAPFCPL-KPYTRCSLKPLCNYSNPIQFQTLIMKTLDESDVGILCYISQLPGF 2419
            K+ +FPPS     L KP+    LKP   + N  + +TL M TL+E+ VGI  YIS LPGF
Sbjct: 5    KLWSFPPSITVLALLKPF---KLKPYYYHCNSTKAETLAMTTLNEAGVGIYSYISHLPGF 61

Query: 2418 RGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFR 2239
              VLKQRYSDFIVNEVD DG VVHLT  D P E + E +K +       K+Y  EIE FR
Sbjct: 62   HAVLKQRYSDFIVNEVDSDGKVVHLTCLDAPPEIVAEMEKERGIPDQTYKTYTSEIELFR 121

Query: 2238 SIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLD 2059
            ++AGD+DAESLK  L++I  G +S++SPIVLSPD DK HRT VH FFKE FKFL+TDT+D
Sbjct: 122  ALAGDSDAESLKSLLNQITSGGQSNVSPIVLSPDSDKSHRTAVHKFFKEHFKFLLTDTVD 181

Query: 2058 GSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRF 1879
            G D TLKCIRVR                       D   KPFDSRGSN+WP+ VGKFLRF
Sbjct: 182  GPDDTLKCIRVRLSSIGQDSNARNSKKRK------DRKDKPFDSRGSNNWPEHVGKFLRF 235

Query: 1878 HLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRL 1699
            HL KENKDTQE LGL+GKMLG+QQRSFGFAGTKDKRSVSTQRVTVFKQ+AKRLAALNDRL
Sbjct: 236  HLYKENKDTQEVLGLLGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQYAKRLAALNDRL 295

Query: 1698 FGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQR 1519
             GIKVGDFC+           GNRFTITLRGVVADSED I+ A D LG+ GFINY+GLQR
Sbjct: 296  IGIKVGDFCHVKEELLLGQLLGNRFTITLRGVVADSEDTIKAAVDALGKKGFINYYGLQR 355

Query: 1518 FGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPR 1339
            FGSGS+P HL+GA LLRGEWK AV +ILDPREGER  I +AREY+K+SGDI+GTLRQLP 
Sbjct: 356  FGSGSMPNHLIGATLLRGEWKMAVSMILDPREGEREGIRKAREYYKDSGDIEGTLRQLPH 415

Query: 1338 HLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVV 1159
            HLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQ++G D VV
Sbjct: 416  HLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASIRVQRHGIDGVV 475

Query: 1158 LGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAED 979
            +GDLVYSK  S     E I++  EDDS ++    S + E +E  L +EK   VKAV+AED
Sbjct: 476  IGDLVYSKSGSTGMPTEAISSGFEDDSCNDKFGCSDLDETTEATLPKEKGSIVKAVDAED 535

Query: 978  LLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGS 799
            L RG+YTI DVILPLPGSRVLYPT+DIA+VY DLAKKDGI+L ES+HS KEFS+ CMTG 
Sbjct: 536  LQRGDYTIADVILPLPGSRVLYPTHDIAQVYRDLAKKDGISLMESVHSTKEFSITCMTGG 595

Query: 798  YRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPV-SVIEETFANGKMDKPLAVCN 622
            YR VFQ+PIDF+WE+++Y D N+PL ETD+D IAK+ PV ++ EE   +   DK      
Sbjct: 596  YRHVFQKPIDFDWELIQYIDGNVPLVETDLDVIAKTGPVHNIREEGCTDAGGDKICTTGC 655

Query: 621  VAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINE 442
               + NL+ND        EAEDE+ +             GN  +                
Sbjct: 656  AKLSVNLKNDTTYTQYDSEAEDEKEVG----------LHGNCGHG--------------- 690

Query: 441  QEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTST 262
                                       D +  Q+ALKL FTLPASCYATMAIRELLKTST
Sbjct: 691  --------------------------CDAREPQVALKLGFTLPASCYATMAIRELLKTST 724

Query: 261  SVAFHKTLN 235
            SVAF KT N
Sbjct: 725  SVAFQKTQN 733


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1 [Vitis
            vinifera]
          Length = 694

 Score =  868 bits (2243), Expect = 0.0
 Identities = 472/749 (63%), Positives = 527/749 (70%)
 Frame = -2

Query: 2481 MKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEK 2302
            MK L+ESDVGI  YISQLPGFRG+LKQRY DFIVNEVD DGNVVHLTS D P E +E  K
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESME--K 58

Query: 2301 KAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLH 2122
                    +NK YA EIE FRS+ GD+D E LKG +D++A G E  +SPIVLS   DK H
Sbjct: 59   NETKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSH 118

Query: 2121 RTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQ 1942
            RT VHNFFKE  KFLVTDT+DG D + KCIRVR                       D   
Sbjct: 119  RTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRK------DRRD 172

Query: 1941 KPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVS 1762
            KPFDSRGS++W + VGKFLRFHL KENKDTQEA+GLIGKMLG+Q RSFGFAGTKDKRSVS
Sbjct: 173  KPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVS 232

Query: 1761 TQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDI 1582
            TQRVTVFKQHA RLAALN+RL GIKVGDFC+           GNRFTITLRGVVADSE+ 
Sbjct: 233  TQRVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEET 292

Query: 1581 IEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAIM 1402
            I+ +AD LGR GFINYFGLQRFGSGSVPTHL+GAALLRGEW++AV LILDPREGER AI 
Sbjct: 293  IKASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIR 352

Query: 1401 EAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 1222
            +AREY+KES DI+GTLRQ PRHLVAERAILQCLKK PGNYLQALKAIPRTLRMMYVHSYQ
Sbjct: 353  KAREYYKESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQ 412

Query: 1221 SYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITE 1042
            SYLWNHAAS RVQ YG   VVLGDLVY KG + EK   V+N+E +DD  S+  D S   E
Sbjct: 413  SYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDE 472

Query: 1041 LSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDG 862
            +SET+L EE+   VKA++AEDLL G YTIDDV+LPLPGSR +YPTNDIA+VYHD AKKD 
Sbjct: 473  ISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDA 532

Query: 861  ITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPV 682
            I+LTES HS KEFS+  MTG +RRVFQ+PIDFEWE+L Y + NIPLAETD D I KSKP 
Sbjct: 533  ISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKP- 591

Query: 681  SVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFADG 502
                               N+   E+ RN  E        +   S    VN         
Sbjct: 592  ------------------SNIIGGEDSRNGNEKENSFQCMKQSESFEHNVN--------- 624

Query: 501  NMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLSF 322
                 L+ DN        NE  G+          E  L Q++    S    +Q ALKLSF
Sbjct: 625  -----LSTDN--------NEPNGVT---------EIGLPQVEPQFESGAPEAQRALKLSF 662

Query: 321  TLPASCYATMAIRELLKTSTSVAFHKTLN 235
            TLPASCYATMAIRELLKTSTSVAF KTLN
Sbjct: 663  TLPASCYATMAIRELLKTSTSVAFQKTLN 691


>ref|XP_010259120.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Nelumbo nucifera]
          Length = 737

 Score =  863 bits (2229), Expect = 0.0
 Identities = 468/782 (59%), Positives = 541/782 (69%), Gaps = 2/782 (0%)
 Frame = -2

Query: 2595 KVLTFPPSAPFCPL-KPYTRCSLKPLCNYSNPIQFQTLIMKTLDESDVGILCYISQLPGF 2419
            K+ +FPPS     L KP+    LKP   + N  + +TL M TL+E+ VGI  YIS LPGF
Sbjct: 5    KLWSFPPSITVLALLKPF---KLKPYYYHCNSTKAETLAMTTLNEAGVGIYSYISHLPGF 61

Query: 2418 RGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFR 2239
              VLKQRYSDFIVNEVD DG VVHLT  D P E + E +K +       K+Y  EIE FR
Sbjct: 62   HAVLKQRYSDFIVNEVDSDGKVVHLTCLDAPPEIVAEMEKERGIPDQTYKTYTSEIELFR 121

Query: 2238 SIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLD 2059
            ++AGD+DAESLK  L++I  G +S++SPIVLSPD DK HRT VH FFKE FKFL+TDT+D
Sbjct: 122  ALAGDSDAESLKSLLNQITSGGQSNVSPIVLSPDSDKSHRTAVHKFFKEHFKFLLTDTVD 181

Query: 2058 GSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRF 1879
            G D TLKCIRVR                       D   KPFDSRGSN+WP+ VGKFLRF
Sbjct: 182  GPDDTLKCIRVRLSSIGQDSNARNSKKRK------DRKDKPFDSRGSNNWPEHVGKFLRF 235

Query: 1878 HLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRL 1699
            HL KENKDTQE LGL+GKMLG+QQRSFGFAGTKDKRSVSTQRVTVFKQ+AKRLAALNDRL
Sbjct: 236  HLYKENKDTQEVLGLLGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQYAKRLAALNDRL 295

Query: 1698 FGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQR 1519
             GIKVGDFC+           GNRFTITLRGVVADSED I+ A D LG+ GFINY+GLQR
Sbjct: 296  IGIKVGDFCHVKEELLLGQLLGNRFTITLRGVVADSEDTIKAAVDALGKKGFINYYGLQR 355

Query: 1518 FGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPR 1339
            FGSGS+P HL+GA LLRGEWK AV +ILDPREGER  I +AREY+K+SGDI+GTLRQLP 
Sbjct: 356  FGSGSMPNHLIGATLLRGEWKMAVSMILDPREGEREGIRKAREYYKDSGDIEGTLRQLPH 415

Query: 1338 HLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVV 1159
            HLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQ++G D VV
Sbjct: 416  HLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASIRVQRHGIDGVV 475

Query: 1158 LGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAED 979
            +GDLVYSK  S     E I++  EDDS ++    S + E +E  L +EK   VKAV+AED
Sbjct: 476  IGDLVYSKSGSTGMPTEAISSGFEDDSCNDKFGCSDLDETTEATLPKEKGSIVKAVDAED 535

Query: 978  LLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGS 799
            L RG+YTI DVILPLPGSRVLYPT+DIA+VY DLAKKDGI+L ES+HS KEFS+ CMTG 
Sbjct: 536  LQRGDYTIADVILPLPGSRVLYPTHDIAQVYRDLAKKDGISLMESVHSTKEFSITCMTGG 595

Query: 798  YRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPV-SVIEETFANGKMDKPLAVCN 622
            YR VFQ+PIDF+WE+++Y D N+PL ETD+D IAK+ PV ++ EE   +   DK      
Sbjct: 596  YRHVFQKPIDFDWELIQYIDGNVPLVETDLDVIAKTGPVHNIREEGCTDAGGDKICTTGC 655

Query: 621  VAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINE 442
               + NL+ND        EAEDE+ +             GN  +                
Sbjct: 656  AKLSVNLKNDTTYTQYDSEAEDEKEVG----------LHGNCGHG--------------- 690

Query: 441  QEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTST 262
                                       D +  Q+ALKL FTLPASCYATMAIRELLKTST
Sbjct: 691  --------------------------CDAREPQVALKLGFTLPASCYATMAIRELLKTST 724

Query: 261  SV 256
            SV
Sbjct: 725  SV 726


>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  863 bits (2229), Expect = 0.0
 Identities = 458/777 (58%), Positives = 552/777 (71%)
 Frame = -2

Query: 2562 CPLKPYTRCSLKPLCNYSNPIQFQTLIMKTLDESDVGILCYISQLPGFRGVLKQRYSDFI 2383
            CP    +  +  P+   SN +     +M T+ ESDVGILC+IS LPGFRG+LKQRYSDFI
Sbjct: 20   CPADSKSNLTKTPVIKSSNSLT----LMTTITESDVGILCFISHLPGFRGILKQRYSDFI 75

Query: 2382 VNEVDFDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLK 2203
            VNEVD +GNVVHLTS D P E ++E +         NK YA EI  FRS+AGD DA+ L+
Sbjct: 76   VNEVDTEGNVVHLTSLDAPPEAVQEGETKT--PDQLNKCYASEIIKFRSLAGDTDADRLE 133

Query: 2202 GFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVR 2023
             F+++I  G+E DI PIVLSPD DK HRT +HNFFKE  +FLVTDT+DG D++ KCIRVR
Sbjct: 134  AFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVR 193

Query: 2022 FCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEA 1843
                                   +   KP+DSRGS+ WP+ +GKFLRFHL KENKDTQEA
Sbjct: 194  LNSGNNNKGRNSKKRK-------ERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEA 246

Query: 1842 LGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXX 1663
            LGLIGKMLG+Q RSFGFAGTKDKRSVSTQRVTVFKQHA RLAALN+RL GIKVGDFCY  
Sbjct: 247  LGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVK 306

Query: 1662 XXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVG 1483
                     GNRFTI LRG+VADSE+ I+ + ++LGR GFINYFGLQRFGSGS+PTH +G
Sbjct: 307  DDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIG 366

Query: 1482 AALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCL 1303
            A LLRGEW++A   ILDPREGER  + +AREY+KE+GDI+GTLRQLPRHLVAERA+LQCL
Sbjct: 367  ATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCL 426

Query: 1302 KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSH 1123
            KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RV+KYG++ VVLGDLVY KG+  
Sbjct: 427  KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDA 486

Query: 1122 EKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVI 943
            EK V+V+ +E ED++  +  D S + E+S T+L E K   VKA+ A D+  G YTI+DV+
Sbjct: 487  EK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVV 545

Query: 942  LPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFE 763
            LP+PGSR++YP NDIA VYHD+AKKDGI+LTES+H+ KEFS+  MTGSYRRVFQ+PIDFE
Sbjct: 546  LPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFE 605

Query: 762  WEVLRYRDPNIPLAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENLRNDQED 583
            WE+L Y D +I L+ETD+D IAK+KPV++++E       +KP        TE  ++  + 
Sbjct: 606  WELLSYTDGSIALSETDLDKIAKTKPVNLVKE-------EKP-----TDGTEG-QDSSDH 652

Query: 582  LPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDE 403
            +  I   ED++            F+ GN+                            E  
Sbjct: 653  MEHIESFEDDKK-----------FSTGNVE--------------------------VEGS 675

Query: 402  REERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
            RE    QI S   S+   +Q ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 676  REAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 732


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  859 bits (2220), Expect = 0.0
 Identities = 468/749 (62%), Positives = 526/749 (70%)
 Frame = -2

Query: 2481 MKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEK 2302
            MK L+ESDVGI  YISQLPGFRG+LKQRY DFIVNEVD DGNVVHLTS D P E +E  K
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESME--K 58

Query: 2301 KAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLH 2122
                    +NK YA EIE FRS+ GD+D E LKG +D++A G E  +SPIVLS   DK H
Sbjct: 59   NETKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSH 118

Query: 2121 RTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQ 1942
            RT VHNFFKE  KFLVTDT+DG D + KCIRVR                       D   
Sbjct: 119  RTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRK------DRRD 172

Query: 1941 KPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVS 1762
            KPFDSRGS++W + VGKFLRFHL KENKDTQEA+GLIGKMLG+Q RSFGFAGTKDKRSVS
Sbjct: 173  KPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVS 232

Query: 1761 TQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDI 1582
            TQRVTVFKQHA RLAALN+RL GIKVGDFC+           GNRFTITLRGVVADSE+ 
Sbjct: 233  TQRVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEET 292

Query: 1581 IEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAIM 1402
            I+ +AD LGR GFINYFGLQRFGSGSVPTHL+GAALLRGEW++AV LILDPREG+   ++
Sbjct: 293  IKASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGD-ILLL 351

Query: 1401 EAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 1222
            +AREY+KES DI+GTLRQ PRHLVAERAILQCLKK PGNYLQALKAIPRTLRMMYVHSYQ
Sbjct: 352  KAREYYKESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQ 411

Query: 1221 SYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITE 1042
            SYLWNHAAS RVQ YG   VVLGDLVY KG + EK   V+N+E +DD  S+  D S   E
Sbjct: 412  SYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDE 471

Query: 1041 LSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDG 862
            +SET+L EE+   VKA++AEDLL G YTIDDV+LPLPGSR +YPTNDIA+VYHD AKKD 
Sbjct: 472  ISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDA 531

Query: 861  ITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPV 682
            I+LTES HS KEFS+  MTG +RRVFQ+PIDFEWE+L Y + NIPLAETD D I KSKP 
Sbjct: 532  ISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKP- 590

Query: 681  SVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFADG 502
                               N+   E+ RN  E        +   S    VN         
Sbjct: 591  ------------------SNIIGGEDSRNGNEKENSFQCMKQSESFEHNVN--------- 623

Query: 501  NMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLSF 322
                 L+ DN        NE  G+          E  L Q++    S    +Q ALKLSF
Sbjct: 624  -----LSTDN--------NEPNGVT---------EIGLPQVEPQFESGAPEAQRALKLSF 661

Query: 321  TLPASCYATMAIRELLKTSTSVAFHKTLN 235
            TLPASCYATMAIRELLKTSTSVAF KTLN
Sbjct: 662  TLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_008789997.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1
            [Phoenix dactylifera]
          Length = 687

 Score =  855 bits (2209), Expect = 0.0
 Identities = 461/749 (61%), Positives = 532/749 (71%), Gaps = 1/749 (0%)
 Frame = -2

Query: 2478 KTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKK 2299
            K+LDE+DVGI CY+S LPGFRGVLKQRYSDFIVNEVD D  +VHLTSFDLP E  E +++
Sbjct: 3    KSLDENDVGISCYVSSLPGFRGVLKQRYSDFIVNEVDLDEKIVHLTSFDLPPECTEVKEE 62

Query: 2298 AQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHR 2119
                  T+ K  A E+ESFRS+ GD DAE+LKG L++I  G E DI+PIVLSPD DK HR
Sbjct: 63   EN--PPTSGKDCASEVESFRSLCGDHDAEALKGLLEKILSGVEGDIAPIVLSPDSDKSHR 120

Query: 2118 TEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQK 1939
             EVHNFFK+ FKFLVTDT++GS+   KCIRVRFC                  D       
Sbjct: 121  AEVHNFFKKNFKFLVTDTVEGSEGGSKCIRVRFCLVQGGGRSRRGKKRKNMGDSDLKDVM 180

Query: 1938 PFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVST 1759
            PFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGKMLG QQRSFGFAGTKDKRSVST
Sbjct: 181  PFDSRGSDNWPENLGKFLRFHLYKENKDTQEALGVIGKMLGFQQRSFGFAGTKDKRSVST 240

Query: 1758 QRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDII 1579
            QRVT+FKQHA+RLAALN RLFGIKVGDFCY           GNRFTITLRGVVADSED I
Sbjct: 241  QRVTIFKQHAERLAALNGRLFGIKVGDFCYVREGLVLGQLFGNRFTITLRGVVADSEDTI 300

Query: 1578 EGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAIME 1399
            + AA+ LGR+GFINY+GLQRFGSGSVPTHL+GAALLRGEWK A  LILDPREGER  I E
Sbjct: 301  KEAANGLGRNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKGAANLILDPREGERDIIRE 360

Query: 1398 AREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQS 1219
            AR  +KE GDID  L++LPRHLVAERAILQ LKKCPGNYLQALKAIPRTLRMMYVHSYQS
Sbjct: 361  ARVSYKEHGDIDLILKKLPRHLVAERAILQFLKKCPGNYLQALKAIPRTLRMMYVHSYQS 420

Query: 1218 YLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITEL 1039
            YLWNHAASRRVQKYG   VVLGDLV+ K SS  +   V ++EPEDD +     Y+ + + 
Sbjct: 421  YLWNHAASRRVQKYGISQVVLGDLVFCKESSAREVAAVDSSEPEDDCSD---PYNCLPDT 477

Query: 1038 SETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDGI 859
            SE  + EEKV+SVK V++EDLL+  YT +DV+LPLPGSR+LYP NDIA+VYHD+AKKDGI
Sbjct: 478  SEEAVPEEKVQSVKTVDSEDLLKAIYTFEDVVLPLPGSRILYPANDIADVYHDMAKKDGI 537

Query: 858  TLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPVS 679
            +LTES+HSAKEFS+  M G YR+VFQRPID+ W +L Y D  +PLAETD+D I K KP  
Sbjct: 538  SLTESVHSAKEFSITNMRGGYRQVFQRPIDYVWGLLSYTDDTVPLAETDLDIIHKRKPAD 597

Query: 678  VIEETF-ANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFADG 502
            +IEE   ANG               NL +   D       E + S+S             
Sbjct: 598  LIEEELHANG---------------NLGSQSNDF------ESQGSVS------------- 623

Query: 501  NMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLSF 322
                                       +VA+D  E   LQ++S  +SD Q S++ALKL F
Sbjct: 624  --------------------------NHVAQDGSEGGSLQVESICSSDAQPSKLALKLGF 657

Query: 321  TLPASCYATMAIRELLKTSTSVAFHKTLN 235
             LPAS YATMAIRELLK STSVA  KT+N
Sbjct: 658  ALPASSYATMAIRELLKMSTSVAHQKTMN 686


>ref|XP_011032429.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1
            [Populus euphratica]
          Length = 699

 Score =  853 bits (2204), Expect = 0.0
 Identities = 453/755 (60%), Positives = 541/755 (71%), Gaps = 6/755 (0%)
 Frame = -2

Query: 2478 KTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKK 2299
            K ++ESDVGILCYISQLPGFRG+LKQRY+DFIVNEVD DGNVVHLT  + P + +EE K+
Sbjct: 5    KAMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKE 64

Query: 2298 --AQVFDS--TANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESD--ISPIVLSPD 2137
              A+V D   +  KS+  E+E FRS+AGD+DAE L+  + ++    ES+  +  IVLSPD
Sbjct: 65   CEAKVSDEKMSERKSHEAEMELFRSLAGDSDAEKLESLISQVDSRTESEDSVPHIVLSPD 124

Query: 2136 PDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDC 1957
             DK HRT VHNFFK+ FKFLVTDT DG DA+ KCIRVR                      
Sbjct: 125  SDKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKKRK----- 179

Query: 1956 VDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKD 1777
             +  +KPFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGKMLG+Q +SFGFAGTKD
Sbjct: 180  -ERGEKPFDSRGSSNWPEHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKD 238

Query: 1776 KRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVA 1597
            KR+VSTQRVTVFKQ A RLAALNDRL GIKVGDFC+           GNRFT+TLRGV+A
Sbjct: 239  KRAVSTQRVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGKLLGNRFTVTLRGVIA 298

Query: 1596 DSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGE 1417
            DSED I+ AAD+LGR GFINYFGLQRFG+GSVPTHL+GAALLRGEWK+AV +ILDPREGE
Sbjct: 299  DSEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGE 358

Query: 1416 RAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMY 1237
            R  I +AREY+KES DI+GTLRQLPRHLVAERA+LQCLKKCPG+YLQA+KAIPRTLRMMY
Sbjct: 359  RDVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMY 418

Query: 1236 VHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDY 1057
            VH YQSYLWNHAAS R+QKYG D VVLGDLVY KG  +EK    +N+E  DD+  +  D 
Sbjct: 419  VHGYQSYLWNHAASERLQKYGFDQVVLGDLVYCKGDDNEKETVGVNSESNDDNCDDTYDC 478

Query: 1056 SSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDL 877
            S + E S T+L E K   VK V  ED+  G YT+DDVILP+PGSRV++PTN+IA VYHDL
Sbjct: 479  SHLDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVILPMPGSRVIFPTNEIATVYHDL 538

Query: 876  AKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIA 697
            AKKD I LTES+H  KEFS+  MTGSYRRVFQ+P+DFEWE+L Y D N PLAETD+D I+
Sbjct: 539  AKKDAINLTESVHHVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKIS 598

Query: 696  KSKPVSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEE 517
            K+   ++I++    GK D+          +N  +D  +LP                    
Sbjct: 599  KTGSTNIIKQE-EQGKGDE----------DNDLSDCTELPVC------------------ 629

Query: 516  AFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIA 337
                    NS+A+ +V                    +E  ER ++ +  S S+ Q +Q+A
Sbjct: 630  ------SRNSIALSSVT-------------------NEESEREVESEQVSGSNWQETQMA 664

Query: 336  LKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
            LKLS TLPASCYATMAIRELLKTSTSVA+HKTLNQ
Sbjct: 665  LKLSLTLPASCYATMAIRELLKTSTSVAYHKTLNQ 699


>ref|XP_009364526.1| PREDICTED: multisubstrate pseudouridine synthase 7 [Pyrus x
            bretschneideri]
          Length = 715

 Score =  853 bits (2204), Expect = 0.0
 Identities = 457/782 (58%), Positives = 548/782 (70%), Gaps = 8/782 (1%)
 Frame = -2

Query: 2556 LKPYTRC--SLKPLCNYSNPIQFQTLIMKTL------DESDVGILCYISQLPGFRGVLKQ 2401
            LKP   C   LKP C+ + P    T  +K L      +ESDVGI+CYISQLPGFRG+LKQ
Sbjct: 3    LKPAPSCFPMLKPYCSATPPPPPLTTALKALMATKTTEESDVGIVCYISQLPGFRGILKQ 62

Query: 2400 RYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDA 2221
            RYSDF+VNEVD +GNVVHLT+ D P E ++E   A       +K Y  EIESFR++A   
Sbjct: 63   RYSDFMVNEVDKEGNVVHLTNLDAPVEAVQES--ATTTGDGTSKDYTTEIESFRALADRN 120

Query: 2220 DAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATL 2041
            DAE L+ F+ +I  G E  + PIVLSPD DK HRT VHNFFK+ FKFLVTDT+DG D++ 
Sbjct: 121  DAERLETFIKQINSGGEDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDSSS 180

Query: 2040 KCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKEN 1861
            KCIRVR                       +   KPFDSRGS DW + VGKFLRFHL KEN
Sbjct: 181  KCIRVRINSGGQNSRGRNSRKRK------ERGDKPFDSRGSEDWSEHVGKFLRFHLYKEN 234

Query: 1860 KDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVG 1681
            KDTQEALG+IGKMLG+Q RSFGFAGTKDKR+V+TQRVTVFK+ A +LAALNDRL GIKVG
Sbjct: 235  KDTQEALGVIGKMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKVG 294

Query: 1680 DFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSV 1501
            DFCY           GNRFTITLRGVVADSED I+ +A  LGR GFINYFGLQRFGSGSV
Sbjct: 295  DFCYVTEGLVLGQLLGNRFTITLRGVVADSEDTIKASASALGRQGFINYFGLQRFGSGSV 354

Query: 1500 PTHLVGAALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAER 1321
            PTHL+GA+LLRGEWKS V + LDPREGE+  I EAREY+KE+ DI+GTLR+LPRHLV+ER
Sbjct: 355  PTHLIGASLLRGEWKSTVSMFLDPREGEKNMITEAREYYKETNDIEGTLRKLPRHLVSER 414

Query: 1320 AILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVY 1141
            AILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RV+KYG D VVLGDLVY
Sbjct: 415  AILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTDQVVLGDLVY 474

Query: 1140 SKGSSHEKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEY 961
             KG+  EK+ EV+++E  D++  + +D + + +++ET L EEK+  VKAV AED+  G Y
Sbjct: 475  CKGNETEKATEVVSSECVDENGDDTLDPNDLGDIAETNLPEEKLSLVKAVTAEDIQSGNY 534

Query: 960  TIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQ 781
            TI DV+LP+PGSRV++P NDIA+V+H+LAKKD I LTES+H+ KEFS+  +TG+YRR+FQ
Sbjct: 535  TIADVVLPMPGSRVIFPENDIADVFHNLAKKDEINLTESVHNVKEFSITSVTGNYRRIFQ 594

Query: 780  RPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENL 601
            +P+DFEWE+L+Y D NIPL +TD+D IAK+KP SV                         
Sbjct: 595  KPMDFEWEILKYSDGNIPLVDTDLDKIAKTKPASV------------------------- 629

Query: 600  RNDQEDLPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDT 421
              D+ED   ++  E  R                        DN  Q E + N+       
Sbjct: 630  --DKEDPASLNGDEGLR------------------------DNAKQTECVDNDIR----- 658

Query: 420  YVAEDEREERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKT 241
                 ++ E+L +  S   ++ Q +Q+ALKLSFTLPASCYATMAIRELLKTSTSVAFHKT
Sbjct: 659  -----DKGEKLPEFGSLCDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHKT 713

Query: 240  LN 235
            LN
Sbjct: 714  LN 715


>ref|XP_008218239.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1 [Prunus
            mume]
          Length = 713

 Score =  853 bits (2204), Expect = 0.0
 Identities = 467/780 (59%), Positives = 549/780 (70%), Gaps = 6/780 (0%)
 Frame = -2

Query: 2556 LKPYTRC--SLKPLCNYSNP----IQFQTLIMKTLDESDVGILCYISQLPGFRGVLKQRY 2395
            LKP   C   LKP C+ + P    ++F T  MKT +E DVGI CYISQLPGFRG+LKQRY
Sbjct: 3    LKPVPSCFSMLKPYCSATPPPPTTLKFITA-MKTTEEPDVGIFCYISQLPGFRGILKQRY 61

Query: 2394 SDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADA 2215
            SDF+VNEVD +GNVVHLT+ D P+E ++E +  +  D+T+ K Y  EIESFRS+    DA
Sbjct: 62   SDFMVNEVDTEGNVVHLTNLDAPAETVKEIE-TKTHDATS-KDYTTEIESFRSLVDPDDA 119

Query: 2214 ESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKC 2035
            E L+  +++I  G+E  I PIVLSPD DK HR  VHNFFKE FKFLVTDT+DG DA+ KC
Sbjct: 120  ERLEAIINQINSGSEDSILPIVLSPDYDKSHRRAVHNFFKENFKFLVTDTVDGPDASSKC 179

Query: 2034 IRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKD 1855
            IRVR                       +   KPFDSRGS+DW + VGKFLRFHL KENKD
Sbjct: 180  IRVRINSGGQNSRGRNSRKRK------ERGDKPFDSRGSDDWSENVGKFLRFHLYKENKD 233

Query: 1854 TQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDF 1675
            TQEALG+I KMLG+Q RSFGFAGTKDKR+V+TQRVTVFKQ A RLAALNDRL GIKVGDF
Sbjct: 234  TQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLATRLAALNDRLIGIKVGDF 293

Query: 1674 CYXXXXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPT 1495
            CY           GNRFTITLRGVVADSED I+ +A  LG+ GFINYFGLQRFGSGSVPT
Sbjct: 294  CYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASAIALGKQGFINYFGLQRFGSGSVPT 353

Query: 1494 HLVGAALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAI 1315
            HL+GA LLRGEWKS V L LDPREGE+ AI EAREY+KE+ DI+GTLR+LPRHLV+E+AI
Sbjct: 354  HLIGATLLRGEWKSTVSLFLDPREGEKNAITEAREYYKETNDIEGTLRRLPRHLVSEKAI 413

Query: 1314 LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSK 1135
            LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQKYG D VVLGDLVY K
Sbjct: 414  LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYCK 473

Query: 1134 GSSHEKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTI 955
            G+  EK  EV+++E  D++ ++ +D   + ++S T L EE++  VKAV AED+L G YTI
Sbjct: 474  GNETEKVSEVVSSECVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNYTI 533

Query: 954  DDVILPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRP 775
            DDV+LP+PGSRV++P NDIA V+HDLAKKD I+LTES+H+ KEFS+  MTGSYRRVFQ+P
Sbjct: 534  DDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSITSMTGSYRRVFQKP 593

Query: 774  IDFEWEVLRYRDPNIPLAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENLRN 595
            +DFEWE+L+Y D N PL +TD D IAK+KP S+ E+   + K           Q+E L N
Sbjct: 594  MDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNEDGRLHDK---------TKQSECLDN 644

Query: 594  DQEDLPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYV 415
            D     D                                DN A+ +      E LP    
Sbjct: 645  DIGLQTD--------------------------------DNGAKAKG-----EELP---- 663

Query: 414  AEDEREERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 235
                      Q +S   ++ Q +Q A KLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 664  ----------QAESLCDTNPQETQTAFKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 713


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  851 bits (2198), Expect = 0.0
 Identities = 468/798 (58%), Positives = 550/798 (68%), Gaps = 23/798 (2%)
 Frame = -2

Query: 2556 LKPYTRCSLKPLCNYSN----------PIQFQTLIMKTLDESDVGILCYISQLPGFRGVL 2407
            LKPY   S    C+ S              F+TL M T++ESDVGI CYIS++PGFRG+L
Sbjct: 15   LKPYYPPSFSSSCSNSTYRTTTATLVADHSFKTL-MTTIEESDVGISCYISKVPGFRGIL 73

Query: 2406 KQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIE-EEKKAQVFDSTANKSYADEIESFRSIA 2230
            KQRYSDFIVNEVD +GNVVHLTS  +P E +E  E++ +   +   K+YA EIESFR +A
Sbjct: 74   KQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAEEREEEITNQVGKNYAAEIESFRELA 133

Query: 2229 GDADAESLKGFLDRIAIGAES--DISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDG 2056
            GDAD + L+ F++++ I  ++  +ISPI+LSPD DK HRT  HNFFKEK KFLVTDT+DG
Sbjct: 134  GDADTQRLEAFINQV-ISEDNCINISPILLSPDSDKAHRTATHNFFKEKLKFLVTDTVDG 192

Query: 2055 SDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFH 1876
             DA+ KCIRVR                       D   KPFDSRGS+ WP+ +GKFLRFH
Sbjct: 193  PDASSKCIRVRLNSRGNINEGNRNSKKRK-----DRNDKPFDSRGSDHWPEHLGKFLRFH 247

Query: 1875 LCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLF 1696
            L KENKDTQEA+GLIGKMLG+Q RSFGFAGTKDKRSVSTQRVTVFKQHA RLAALNDRL 
Sbjct: 248  LYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLI 307

Query: 1695 GIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRF 1516
            GIKVGDFCY           GNRFT+TLRGVVADSED I+G+AD+LGR GFINYFGLQRF
Sbjct: 308  GIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRF 367

Query: 1515 GSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAIM-------EAREYFKESGDIDGT 1357
            GSGSVPTHL+GAALLRGEWK AV +ILDPREG+   ++        AREY+KES DIDGT
Sbjct: 368  GSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGT 427

Query: 1356 LRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKY 1177
            LRQLPR+L AERA+LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQKY
Sbjct: 428  LRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKY 487

Query: 1176 GNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEK---VK 1006
            G D VV+GDLVY KG   E+ +   N+  EDD   +    S++ E S T+L E K   VK
Sbjct: 488  GTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTLVK 547

Query: 1005 SVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKE 826
              +AVNAEDL  G YTI+DVILP+PGSRV YPTNDIA+VYHDLA+KD I L ES+HSAKE
Sbjct: 548  VEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSAKE 607

Query: 825  FSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPVSVIEETFANGKM 646
            FS+  MTGSYRRVFQ+P+DFEWE+L Y D   PLAETDM+ +AK+K + + +E       
Sbjct: 608  FSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKE------- 660

Query: 645  DKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVA 466
                        E  +ND +   D                + +  + GN           
Sbjct: 661  -----------EETKKNDTKSPSD---------------CMRQPMSSGN----------- 683

Query: 465  QRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAI 286
                       L   Y  E ERE  + +++     + + +Q ALKL+FTLPASCYATMAI
Sbjct: 684  --------DLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTLPASCYATMAI 735

Query: 285  RELLKTSTSVAFHKTLNQ 232
            RELLKTSTSVAFHKTLNQ
Sbjct: 736  RELLKTSTSVAFHKTLNQ 753


>ref|XP_012089238.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X2
            [Jatropha curcas]
          Length = 700

 Score =  848 bits (2192), Expect = 0.0
 Identities = 452/750 (60%), Positives = 534/750 (71%), Gaps = 3/750 (0%)
 Frame = -2

Query: 2475 TLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEE-KK 2299
            T++E DVGILCYISQLPGFRG+LKQRYSDFIVNEVD DGNVVHLTS ++P + +E    +
Sbjct: 7    TIEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDR 66

Query: 2298 AQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAE--SDISPIVLSPDPDKL 2125
            A    +  +K Y  EIESFR +A + D + L+ F+ +I   +E  S ISPI+LSPD DK 
Sbjct: 67   ANKVSNELDKDYKSEIESFRLLASEPDTQCLEAFIAQITSASEDRSSISPILLSPDSDKA 126

Query: 2124 HRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDST 1945
            HRT +HNFFKEKFKFLVTDT+DG DA+ KCIR+R                       +  
Sbjct: 127  HRTAMHNFFKEKFKFLVTDTVDGPDASSKCIRIRLNSGGHKNGGRNSKKRK------ERG 180

Query: 1944 QKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSV 1765
             KPFDSRGS+DWP+ +GKFLRFHL KENKDTQEA+ LIGKMLG+Q RSFGFAGTKDKR++
Sbjct: 181  DKPFDSRGSDDWPEHLGKFLRFHLYKENKDTQEAMSLIGKMLGLQPRSFGFAGTKDKRAI 240

Query: 1764 STQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSED 1585
            STQRVTVFKQHA RLAALNDRL GIKVGDFC+           GNRFT+TLRGVVADSED
Sbjct: 241  STQRVTVFKQHASRLAALNDRLIGIKVGDFCHVKEGLLLGQLLGNRFTVTLRGVVADSED 300

Query: 1584 IIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAI 1405
             I+ +AD+LGR+GFINYFGLQRFGSGSVPTHL+GAAL RGEWK+ V +ILDPREGER A+
Sbjct: 301  TIKRSADSLGRNGFINYFGLQRFGSGSVPTHLIGAALFRGEWKNVVSMILDPREGERDAV 360

Query: 1404 MEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSY 1225
             +AREY+KE+GDI+GTLRQLPR+L+AERAILQCLKKCPGNY QALK+IPRTLRMMYVHSY
Sbjct: 361  RKAREYYKETGDIEGTLRQLPRYLIAERAILQCLKKCPGNYSQALKSIPRTLRMMYVHSY 420

Query: 1224 QSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSIT 1045
            QSYLWNHAAS RVQKYG D VV+GDLVY K +  EK     N+E ED S  +  D S++ 
Sbjct: 421  QSYLWNHAASMRVQKYGTDQVVVGDLVYCKENDTEKDAADFNSECEDGSCGDIYDCSNLD 480

Query: 1044 ELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKD 865
            E + T+  E K   VKAV AED+  G Y +DDVILP+PGSRV YPTNDIAE YHDLAKKD
Sbjct: 481  ETTGTDCPERKNALVKAVTAEDISTGNYNVDDVILPMPGSRVCYPTNDIAEAYHDLAKKD 540

Query: 864  GITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKP 685
             I L ES+H+ KEFS+  MTGSYRRVFQ+P+DFEWE++ Y D N PLAETD++ +AK K 
Sbjct: 541  AINLAESVHNVKEFSITSMTGSYRRVFQKPMDFEWELVSYTDCNTPLAETDLEKVAKRKT 600

Query: 684  VSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFAD 505
             ++I+E     + +          T +  ND+      HE  D           +EA +D
Sbjct: 601  HTLIKEEERVNRDEGKSLSDGTELTASFENDE------HERVD-----------KEAESD 643

Query: 504  GNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLS 325
            G                    +EGLP              Q +S + S+   +Q ALKLS
Sbjct: 644  G--------------------EEGLP--------------QAESPTGSNSHGAQTALKLS 669

Query: 324  FTLPASCYATMAIRELLKTSTSVAFHKTLN 235
            FTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 670  FTLPASCYATMAIRELLKTSTSVAFHKTLN 699


>ref|XP_008388664.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Malus
            domestica]
          Length = 703

 Score =  848 bits (2191), Expect = 0.0
 Identities = 451/771 (58%), Positives = 544/771 (70%), Gaps = 5/771 (0%)
 Frame = -2

Query: 2532 LKPLCNYSNP-----IQFQTLIMKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVD 2368
            LKP C+ + P        + L+  T +ESDVGI CYISQLPGFRG+LKQRYSDF+ NEVD
Sbjct: 2    LKPYCSATPPPPPLTTALKALVATTTEESDVGIFCYISQLPGFRGILKQRYSDFMXNEVD 61

Query: 2367 FDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDR 2188
             +GNVVHLT+ D P E ++E       D T+ K Y  EIESFR++AG  DAE L+ F+ +
Sbjct: 62   KEGNVVHLTNLDAPVEAVQESGTT-TGDGTS-KDYTTEIESFRALAGPNDAERLETFIKQ 119

Query: 2187 IAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXX 2008
            I  G E  + PIVLSPD DK HRT VHNFFK+ FKFLVTDT+DG DA+ KCIRVR     
Sbjct: 120  INSGGEDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDASSKCIRVRINSGG 179

Query: 2007 XXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIG 1828
                              +   KPFDSRGS DW + VGKFLRFHL KENKDTQEALG+IG
Sbjct: 180  QNSRGRNSRKRK------ERXDKPFDSRGSEDWSEXVGKFLRFHLYKENKDTQEALGVIG 233

Query: 1827 KMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXX 1648
            KMLG+Q RSFGFAGTKDKR+V+TQRVTVFK+ A +LAALNDRL GIKVGDFCY       
Sbjct: 234  KMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKVGDFCYVTXGLVL 293

Query: 1647 XXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLR 1468
                GN FTITLRGVVADSED I+ +A  LG+ GFINYFGLQRFGSGSVPTHL+G +LLR
Sbjct: 294  GQLLGNXFTITLRGVVADSEDTIKASASALGKQGFINYFGLQRFGSGSVPTHLIGXSLLR 353

Query: 1467 GEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPG 1288
            GEWKS   + LDPREGER  I EAREY+KE+ DI+GTLR+LPRHLV+ERAILQCLKKCPG
Sbjct: 354  GEWKSTXSMFLDPREGERNVITEAREYYKETNDIEGTLRKLPRHLVSERAILQCLKKCPG 413

Query: 1287 NYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVE 1108
            NYLQAL+AIPRTLRMMYVHSYQSYLWNHAAS RV+KYG D VVLGDLVY KG+  EK  E
Sbjct: 414  NYLQALRAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTDQVVLGDLVYCKGNETEKVTE 473

Query: 1107 VINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPG 928
            V+++E  D++  + +D + + ++++T L EEK+  VKAV AED+  G YTI+DV+LP+PG
Sbjct: 474  VVSSECVDENGDDTLDPNDLGDIADTNLPEEKLSLVKAVTAEDIQSGNYTIEDVVLPMPG 533

Query: 927  SRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLR 748
            SRV++P NDIA+V+HDLAKKD I+LTES+H  KEFS+  +TG+YRR+FQ+P+DFEW +L+
Sbjct: 534  SRVIFPENDIADVFHDLAKKDEISLTESVHDVKEFSITSVTGNYRRIFQKPMDFEWXILK 593

Query: 747  YRDPNIPLAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIH 568
            Y D  IPL +TD+D IAK+KP SV                                    
Sbjct: 594  YSDGTIPLVDTDLDKIAKTKPASV------------------------------------ 617

Query: 567  EAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERL 388
            + ED  S++           DG+++     DN  Q E + N+  G            E+L
Sbjct: 618  DKEDPASLN----------GDGSLH-----DNAKQTECVDNDIGG----------NREKL 652

Query: 387  LQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 235
             ++ S S ++ Q +Q+ALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 653  PEVGSLSDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 703


>ref|XP_012492855.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Gossypium
            raimondii]
          Length = 733

 Score =  846 bits (2185), Expect = 0.0
 Identities = 452/765 (59%), Positives = 537/765 (70%)
 Frame = -2

Query: 2526 PLCNYSNPIQFQTLIMKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVH 2347
            P+  YSN   + +L M T+ ESDVGILC+IS LPGFRG+LKQRYSDFIVNEVD +GNVVH
Sbjct: 33   PITKYSN---YSSLTMTTITESDVGILCFISNLPGFRGILKQRYSDFIVNEVDTEGNVVH 89

Query: 2346 LTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAES 2167
            LTS D P E  +E +         NK+YA EIE FRS+A + D + L+ F+++I  G+E 
Sbjct: 90   LTSLDAPPEAFQEGETK--ISDQLNKNYASEIEKFRSLACEIDVDQLEAFINQITSGSEE 147

Query: 2166 DISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXX 1987
            DISPIVLSPD DK HRT +HNFFKE  +FLVTDT+DG D++ KCIRVR            
Sbjct: 148  DISPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNKNKGRNS 207

Query: 1986 XXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQ 1807
                           +P+DSRGS+ WP  +G FLRFHL KENKDTQEALGLIGKMLG+Q 
Sbjct: 208  NKRKRG--------DRPYDSRGSSHWPAHLGNFLRFHLFKENKDTQEALGLIGKMLGIQP 259

Query: 1806 RSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNR 1627
            RSFGFAGTKDKRSVSTQRVTVFKQ+A RLAALNDRL GIKVGDFCY           GNR
Sbjct: 260  RSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIKVGDFCYVKDDLLLGQLLGNR 319

Query: 1626 FTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAV 1447
            FTI LRGVVADSED I+ +A++LGR GFINYFGLQRFGSGS+PTH +GA LLRGEWK+A 
Sbjct: 320  FTIVLRGVVADSEDTIQASAESLGRHGFINYFGLQRFGSGSIPTHHIGATLLRGEWKAAA 379

Query: 1446 GLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALK 1267
              ILDPREGER  I +AREY+K++GDIDGTL+QLPRHLVAERA+LQCLKK PGNYLQALK
Sbjct: 380  STILDPREGERNIISKAREYYKQTGDIDGTLKQLPRHLVAERAMLQCLKKSPGNYLQALK 439

Query: 1266 AIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPE 1087
            AIPRTLRMMYVHSYQSYLWNHAAS RVQKYG+  VVLGDLVYSKG   EK+ EV+  E E
Sbjct: 440  AIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSSEVVLGDLVYSKGDDAEKT-EVVPPEHE 498

Query: 1086 DDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPT 907
            D+S  +  D   + E+S  +L  EK   VK + A D+  G Y I+DV+LP+PGSR++YP 
Sbjct: 499  DNSLEDAYDCGQLDEISGKDLPLEKNNLVKVITASDISTGNYNIEDVVLPMPGSRIIYPM 558

Query: 906  NDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIP 727
            N++A+VYHD+AKKDGI+LTES+H+ KEFS+  MTGSYRRVFQ+PIDF W++L Y D N+ 
Sbjct: 559  NEVADVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFRWDLLSYTDGNLA 618

Query: 726  LAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERS 547
            L+ETD+D IAK+KPV+ ++E                   EN  N  E             
Sbjct: 619  LSETDIDKIAKTKPVNPVKE-------------------ENPTNGTEG------------ 647

Query: 546  ISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFS 367
                    EE F           +++ Q E+  +E++   D    E  RE    Q+ S  
Sbjct: 648  --------EEPF-----------NHLEQLESFEDEKKFSTDDNEVEVSREAEHPQVHSPP 688

Query: 366  TSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
              +    Q ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 689  DLNSLEPQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 733


>ref|XP_012492856.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Gossypium
            raimondii] gi|763777866|gb|KJB44989.1| hypothetical
            protein B456_007G284000 [Gossypium raimondii]
          Length = 730

 Score =  845 bits (2184), Expect = 0.0
 Identities = 453/765 (59%), Positives = 539/765 (70%)
 Frame = -2

Query: 2526 PLCNYSNPIQFQTLIMKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVH 2347
            P+  YSN   + +L M T+ ESDVGILC+IS LPGFRG+LKQRYSDFIVNEVD +GNVVH
Sbjct: 33   PITKYSN---YSSLTMTTITESDVGILCFISNLPGFRGILKQRYSDFIVNEVDTEGNVVH 89

Query: 2346 LTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAES 2167
            LTS D P E+ E +   Q+     NK+YA EIE FRS+A + D + L+ F+++I  G+E 
Sbjct: 90   LTSLDAPPEEGETKISDQL-----NKNYASEIEKFRSLACEIDVDQLEAFINQITSGSEE 144

Query: 2166 DISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXX 1987
            DISPIVLSPD DK HRT +HNFFKE  +FLVTDT+DG D++ KCIRVR            
Sbjct: 145  DISPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNKNKGRNS 204

Query: 1986 XXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQ 1807
                           +P+DSRGS+ WP  +G FLRFHL KENKDTQEALGLIGKMLG+Q 
Sbjct: 205  NKRKRG--------DRPYDSRGSSHWPAHLGNFLRFHLFKENKDTQEALGLIGKMLGIQP 256

Query: 1806 RSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNR 1627
            RSFGFAGTKDKRSVSTQRVTVFKQ+A RLAALNDRL GIKVGDFCY           GNR
Sbjct: 257  RSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIKVGDFCYVKDDLLLGQLLGNR 316

Query: 1626 FTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAV 1447
            FTI LRGVVADSED I+ +A++LGR GFINYFGLQRFGSGS+PTH +GA LLRGEWK+A 
Sbjct: 317  FTIVLRGVVADSEDTIQASAESLGRHGFINYFGLQRFGSGSIPTHHIGATLLRGEWKAAA 376

Query: 1446 GLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALK 1267
              ILDPREGER  I +AREY+K++GDIDGTL+QLPRHLVAERA+LQCLKK PGNYLQALK
Sbjct: 377  STILDPREGERNIISKAREYYKQTGDIDGTLKQLPRHLVAERAMLQCLKKSPGNYLQALK 436

Query: 1266 AIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPE 1087
            AIPRTLRMMYVHSYQSYLWNHAAS RVQKYG+  VVLGDLVYSKG   EK+ EV+  E E
Sbjct: 437  AIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSSEVVLGDLVYSKGDDAEKT-EVVPPEHE 495

Query: 1086 DDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPT 907
            D+S  +  D   + E+S  +L  EK   VK + A D+  G Y I+DV+LP+PGSR++YP 
Sbjct: 496  DNSLEDAYDCGQLDEISGKDLPLEKNNLVKVITASDISTGNYNIEDVVLPMPGSRIIYPM 555

Query: 906  NDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIP 727
            N++A+VYHD+AKKDGI+LTES+H+ KEFS+  MTGSYRRVFQ+PIDF W++L Y D N+ 
Sbjct: 556  NEVADVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFRWDLLSYTDGNLA 615

Query: 726  LAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERS 547
            L+ETD+D IAK+KPV+ ++E                   EN  N  E             
Sbjct: 616  LSETDIDKIAKTKPVNPVKE-------------------ENPTNGTEG------------ 644

Query: 546  ISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFS 367
                    EE F           +++ Q E+  +E++   D    E  RE    Q+ S  
Sbjct: 645  --------EEPF-----------NHLEQLESFEDEKKFSTDDNEVEVSREAEHPQVHSPP 685

Query: 366  TSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
              +    Q ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 686  DLNSLEPQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 730


>ref|XP_009587531.1| PREDICTED: multisubstrate pseudouridine synthase 7 [Nicotiana
            tomentosiformis]
          Length = 736

 Score =  845 bits (2182), Expect = 0.0
 Identities = 459/751 (61%), Positives = 530/751 (70%)
 Frame = -2

Query: 2484 IMKTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEE 2305
            +MKT+DESDVGI CYIS+LPGFRG+LKQRYSDFIVNEVD DGNVVHLTS + P+E   E+
Sbjct: 46   MMKTMDESDVGISCYISKLPGFRGILKQRYSDFIVNEVDLDGNVVHLTSLEAPAEVCSED 105

Query: 2304 KKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKL 2125
            K   + D   NKSY  EIESFRS+AG++DA+ LKG +D++  G +     +VLSP  DKL
Sbjct: 106  KDVNISDQL-NKSYVTEIESFRSLAGNSDADKLKGLIDKLNSGVDVSDESVVLSPSSDKL 164

Query: 2124 HRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDST 1945
            HRT +HNFFKE+ KFLVTD +DG + + KC+RVR                       D  
Sbjct: 165  HRTAIHNFFKERLKFLVTDAVDGPEDSSKCVRVRLNKGGNNGRGRFSRKRK------DRN 218

Query: 1944 QKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSV 1765
             KP+DSRGS+ WP+ +GKFLRFHL KENKDTQEAL +I KMLG+Q RSFGFAGTKDKR+V
Sbjct: 219  DKPYDSRGSDSWPEHLGKFLRFHLFKENKDTQEALNVIAKMLGVQPRSFGFAGTKDKRAV 278

Query: 1764 STQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSED 1585
            STQRVTVFKQ A R+AALN+RL GIKVGDFC+           GNRFTITLRGV ADSED
Sbjct: 279  STQRVTVFKQRASRVAALNERLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSADSED 338

Query: 1584 IIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGERAAI 1405
            II+ +A  LG  GFINYFGLQRFGS SVPTHL+GAALLRGEWK+AV LILDPREGE+ AI
Sbjct: 339  IIKASAVALGELGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAI 398

Query: 1404 MEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSY 1225
               REY+KESGDIDGTLRQLPRHLVAERAILQCLKK PGN LQALK IPRTLRMMYVHSY
Sbjct: 399  STVREYYKESGDIDGTLRQLPRHLVAERAILQCLKKSPGNCLQALKGIPRTLRMMYVHSY 458

Query: 1224 QSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSNGIDYSSIT 1045
            QSYLWNHAAS RVQK+G D VVLGDLVYSK    E+  E   AE ED + +N  DYS++ 
Sbjct: 459  QSYLWNHAASMRVQKHGFDQVVLGDLVYSKEQPKER--ETFVAECEDVNGNNMDDYSNLD 516

Query: 1044 ELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKD 865
            E SET+L EEK  SVKA+N EDL+ G YTI+DV+LPLPGSRV+YP+NDI EVY DLA+KD
Sbjct: 517  ETSETDLPEEKNISVKAINEEDLISGTYTIEDVLLPLPGSRVIYPSNDIGEVYCDLAQKD 576

Query: 864  GITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKP 685
            GI+LTE+ H  KEFS+  MTG+YRRVFQ+P DFEWE+L Y D  IPLAETD D IAKS  
Sbjct: 577  GISLTETAHKIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVK 636

Query: 684  VSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVNVIEEAFAD 505
             S                    A+ +N  N  E+LP  +                  F  
Sbjct: 637  KS-------------------KAREDNSANGSEELPADY------------GTSSATFEG 665

Query: 504  GNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQSSQIALKLS 325
            G+M           RE  IN               E R+   +S S  + Q SQ+ALKLS
Sbjct: 666  GDMLPG------KSREEKINS--------------EARMQSEESQSGGNAQESQMALKLS 705

Query: 324  FTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
            FTLPASCYATMA+RELLKTSTSVAFHK+LN+
Sbjct: 706  FTLPASCYATMAVRELLKTSTSVAFHKSLNE 736


>ref|XP_010938307.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Elaeis
            guineensis] gi|743760689|ref|XP_010938316.1| PREDICTED:
            pseudouridylate synthase 7 homolog isoform X1 [Elaeis
            guineensis]
          Length = 717

 Score =  843 bits (2179), Expect = 0.0
 Identities = 459/771 (59%), Positives = 538/771 (69%), Gaps = 4/771 (0%)
 Frame = -2

Query: 2535 SLKPLCNYSNPIQFQTLIM-KTLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDG 2359
            SLKP      P   +TL M K+LDE DVGI CY+S +PGFRGVLKQRYSDFIVNEVD D 
Sbjct: 22   SLKP---QRPPKPSETLAMAKSLDEPDVGISCYVSSVPGFRGVLKQRYSDFIVNEVDLDE 78

Query: 2358 NVVHLTSFDLPSE--KIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRI 2185
             +VHL+SFDLP E  +++EE+   +    + K Y   +ESFRS+ GD DAE+LKG L++I
Sbjct: 79   KIVHLSSFDLPPECTEVKEEENPPM----SGKDYFSTVESFRSLCGDHDAEALKGLLEKI 134

Query: 2184 AIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXX 2005
            +  AE DI+P+VLSPD +K HR EVHNFFK+ FKF VTDT++GS+   KC+RVRFC    
Sbjct: 135  SSSAEGDIAPVVLSPDSEKSHRAEVHNFFKKNFKFFVTDTVEGSEGASKCVRVRFCSVQG 194

Query: 2004 XXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGK 1825
                                  PFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGK
Sbjct: 195  GGGSRRGKKRKDIGASDLKDDMPFDSRGSDNWPENLGKFLRFHLYKENKDTQEALGVIGK 254

Query: 1824 MLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXX 1645
            MLG+QQRSFGFAGTKDKRS+STQRVT+FKQHAKRLAALN RLFGIKVGDFCY        
Sbjct: 255  MLGIQQRSFGFAGTKDKRSISTQRVTIFKQHAKRLAALNSRLFGIKVGDFCYVREGLVLG 314

Query: 1644 XXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRG 1465
               GNRFTITLRGVVADSED+I+ AA+ LGR+GFINY+GLQRFGSGSVPTHL+GAALLRG
Sbjct: 315  RLFGNRFTITLRGVVADSEDVIKEAANGLGRNGFINYYGLQRFGSGSVPTHLIGAALLRG 374

Query: 1464 EWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGN 1285
            EWKSA  LILDPREGE + I EAR  +KE GDID TL++LPRHLVAERAILQCLKKCPGN
Sbjct: 375  EWKSAANLILDPREGEHSIIREARVSYKEHGDIDLTLKKLPRHLVAERAILQCLKKCPGN 434

Query: 1284 YLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEV 1105
            YLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYG   V+LGDLV+ K SS  +   V
Sbjct: 435  YLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGISQVILGDLVFCKESSAREVDAV 494

Query: 1104 INAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGS 925
              +EPEDD              +   + EE V+SVK V++EDLL+G YT +DV+LPLPGS
Sbjct: 495  DISEPEDDCND---------PYNCQAIPEENVESVKTVDSEDLLKGIYTFEDVVLPLPGS 545

Query: 924  RVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRY 745
            R+ YP NDIA+VYHD+AKKDG++LTES+H+AKEFS+  M G YRRVFQRPID+ WE+L Y
Sbjct: 546  RIFYPANDIADVYHDMAKKDGVSLTESVHNAKEFSITNMRGGYRRVFQRPIDYVWELLSY 605

Query: 744  RDPNIPLAETDMDAIAKSKPVSVI-EETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIH 568
             D N+PLAETD+D I K KP  +I EE  ANG         N     N            
Sbjct: 606  TDDNVPLAETDLDVIHKKKPADLIKEELLANG---------NPGGQSN------------ 644

Query: 567  EAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERL 388
            + E + S+S  V        DG+   SL V++V                           
Sbjct: 645  DFESQGSVSNHV------AKDGSDGGSLQVESVC-------------------------- 672

Query: 387  LQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 235
                   +SD Q S++ALKL FTLPAS YATMAIRELLK STSVA  KT+N
Sbjct: 673  -------SSDAQPSKLALKLGFTLPASSYATMAIRELLKMSTSVAHQKTMN 716


>ref|XP_008370684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Malus
            domestica]
          Length = 716

 Score =  843 bits (2179), Expect = 0.0
 Identities = 455/783 (58%), Positives = 551/783 (70%), Gaps = 9/783 (1%)
 Frame = -2

Query: 2556 LKPYTRC--SLKPLCNYSNP-------IQFQTLIMKTLDESDVGILCYISQLPGFRGVLK 2404
            LKP   C   LKP C+ + P            +  KT +ESDVGI CYISQLPGFRGVLK
Sbjct: 3    LKPAPSCFSMLKPYCSATPPPPPPPTTALKALMAXKTXEESDVGIFCYISQLPGFRGVLK 62

Query: 2403 QRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKKAQVFDSTANKSYADEIESFRSIAGD 2224
            QRYSDF+VNEVD +GNVVHLT+ D P E ++E          A+K Y  EIESFR++A  
Sbjct: 63   QRYSDFMVNEVDKEGNVVHLTNLDAPVEAVKES--GTTTSDGASKDYTTEIESFRALADP 120

Query: 2223 ADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKEKFKFLVTDTLDGSDAT 2044
             DAE L+  +++I   ++  + PIVLSPD DK HRT VHNFFK+ FKFLVTDT+DG DA+
Sbjct: 121  NDAERLETLINQINSSSDDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDAS 180

Query: 2043 LKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTQKPFDSRGSNDWPDGVGKFLRFHLCKE 1864
             KCIRVR                       +   KPFDSRGS DW + VGKFLRFHL KE
Sbjct: 181  SKCIRVRINSGGQSNRGRNSRKRK------ERGDKPFDSRGSEDWSEHVGKFLRFHLYKE 234

Query: 1863 NKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKV 1684
            NKDTQEALG+IGKMLG+Q RSFGFAGTKDKR+V+TQRVTVFK+ A +LAALNDRL GIKV
Sbjct: 235  NKDTQEALGVIGKMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKV 294

Query: 1683 GDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIEGAADNLGRDGFINYFGLQRFGSGS 1504
            GDFCY           GNRFTITLRGVVADSED I+ +A  LG+ GFINYFGLQRFGSGS
Sbjct: 295  GDFCYVTEGLVLGQLLGNRFTITLRGVVADSEDTIKASASALGKQGFINYFGLQRFGSGS 354

Query: 1503 VPTHLVGAALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAE 1324
            VPTH +GA+LLRGEWKS V + LDPREGER  I EAREY+KE+ DI+GTLR+LPRHLV+E
Sbjct: 355  VPTHRIGASLLRGEWKSTVSMFLDPREGERNVITEAREYYKETNDIEGTLRKLPRHLVSE 414

Query: 1323 RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLV 1144
            RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWN+AAS RV+KYG D VVLGDLV
Sbjct: 415  RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNNAASMRVKKYGTDRVVLGDLV 474

Query: 1143 YSKGSSHEKSVEVINAEPEDDSTSNGIDYSSITELSETELFEEKVKSVKAVNAEDLLRGE 964
            Y KG+  EK  EV+ +E  D++  + +D + + +++ET L EEK+  VKAV AED+  G 
Sbjct: 475  YCKGNETEKVTEVVTSECIDENGDDMLDPNDLGDIAETNLPEEKLNLVKAVTAEDIRSGI 534

Query: 963  YTIDDVILPLPGSRVLYPTNDIAEVYHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVF 784
            YTI+DV+LP+PGSRV++P NDIA+V+HDLAKKD I+LTES+H+ KEFS+  +TG+YRRVF
Sbjct: 535  YTIEDVVLPMPGSRVIFPENDIADVFHDLAKKDAISLTESVHNVKEFSITSVTGNYRRVF 594

Query: 783  QRPIDFEWEVLRYRDPNIPLAETDMDAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTEN 604
            Q+P+DFEWE+L+Y D N+PL +TD+D I+K+KP           K+DK            
Sbjct: 595  QKPMDFEWEILKYVDGNVPLVDTDLDKISKAKP----------AKVDK------------ 632

Query: 603  LRNDQEDLPDIHEAEDERSISKLVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPD 424
                          ED  S++           DG+++     D+  Q E + N+   + D
Sbjct: 633  --------------EDPSSVN----------GDGSLH-----DSAXQSECIDND---IXD 660

Query: 423  TYVAEDEREERLLQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHK 244
            T        E++  + S S ++ Q +Q+ALKLSFTLPASCYATMAIRELLKTSTSVAFHK
Sbjct: 661  T-------GEKVXXVGSLSDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHK 713

Query: 243  TLN 235
            TLN
Sbjct: 714  TLN 716


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  843 bits (2179), Expect = 0.0
 Identities = 452/759 (59%), Positives = 541/759 (71%), Gaps = 11/759 (1%)
 Frame = -2

Query: 2475 TLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPSEKIEEEKK- 2299
            +++ESDVGILCYISQLPGFRG+LKQRY+DFIVNEVD DGNVVHLT  + P + +EE K+ 
Sbjct: 54   SMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKEC 113

Query: 2298 -AQVFDS--TANKSYADEIESFRSIAGDADAESLKGFLDRI--AIGAESDISPIVLSPDP 2134
             A+V D   + +KSY  EIE FRS+AGD+DAE L+  + ++    G+E  +  IVLSPD 
Sbjct: 114  GAKVSDEKMSESKSYEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDS 173

Query: 2133 DKLHRTEVHNFFKEKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCV 1954
            DK HRT VHNFFK+ FKFLVTDT DG DA+ KCIRVR                       
Sbjct: 174  DKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKKRK------ 227

Query: 1953 DSTQKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDK 1774
            +  +KPFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGKMLG+Q +SFGFAGTKDK
Sbjct: 228  ERGEKPFDSRGSSNWPEHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDK 287

Query: 1773 RSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVAD 1594
            R+VSTQRVTVFKQ A RLAALNDRL GIKVGDFC+           GNRFT+TLRGV+AD
Sbjct: 288  RAVSTQRVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIAD 347

Query: 1593 SEDIIEGAADNLGRDGFINYFGLQRFGSGSVPTHLVGAALLRGEWKSAVGLILDPREGER 1414
            SED I+ AAD+LGR GFINYFGLQRFG+GSVPTHL+GAALLRGEWK+AV +ILDPREG+ 
Sbjct: 348  SEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDI 407

Query: 1413 A-----AIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTL 1249
                   I +AREY+KES DI+GTLRQLPRHLVAERA+LQCLKKCPG+YLQA+KAIPRTL
Sbjct: 408  LLLFPYVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTL 467

Query: 1248 RMMYVHSYQSYLWNHAASRRVQKYGNDHVVLGDLVYSKGSSHEKSVEVINAEPEDDSTSN 1069
            RMMYVH YQSYLWNHAAS RVQKYG D V+LGDLVY KG   EK    +N+E  DD+  +
Sbjct: 468  RMMYVHGYQSYLWNHAASERVQKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDD 527

Query: 1068 GIDYSSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEV 889
              D S + E S T+L E K   VK V  ED+  G YT+DDV+LP+PGSRV++PTN+IA+V
Sbjct: 528  TYDCSHLDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKV 587

Query: 888  YHDLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWEVLRYRDPNIPLAETDM 709
            YHDLAKKD I LTES+H  KEFS+  MTGSYRRVFQ+P+DFEWE+L Y D N PLAETD+
Sbjct: 588  YHDLAKKDAINLTESVHRVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDL 647

Query: 708  DAIAKSKPVSVIEETFANGKMDKPLAVCNVAQTENLRNDQEDLPDIHEAEDERSISKLVN 529
            D I+K+   ++I++    GK D+          +N  +D   LP                
Sbjct: 648  DKISKTGSTNIIKQE-EQGKGDE----------DNDLSDCTKLPVC-------------- 682

Query: 528  VIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYVAEDEREERLLQIKSFSTSDVQS 349
                        NS+A+ +               DT    +E  ER ++ +  S S+ Q 
Sbjct: 683  ----------SRNSIALSS---------------DT----NEESEREVESEQVSGSNWQE 713

Query: 348  SQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 232
            +Q+ALKLS TLPASCYATMAIRELLKTSTSVA+HKTLNQ
Sbjct: 714  TQMALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLNQ 752