BLASTX nr result
ID: Cinnamomum24_contig00004141
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00004141
(5776 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74503.1| hypothetical protein M569_00220, partial [Genlise... 330 e-118
ref|YP_740241.1| ribosomal protein S3 [Liriodendron tulipifera] ... 395 e-106
ref|YP_007474491.1| ribosomal protein S3 (chloroplast) [Magnolia... 389 e-104
ref|YP_009048326.1| 30S ribosomal protein S3 (chloroplast) [Magn... 389 e-104
gb|AEX98707.1| ribosomal protein S3 (chloroplast) [Magnolia offi... 389 e-104
ref|YP_004769753.1| ribosomal protein S3 [Magnolia kwangsiensis]... 389 e-104
ref|YP_006576153.1| ribosomal protein S3 (chloroplast) [Magnolia... 387 e-104
ref|NP_862792.1| ribosomal protein S3 [Calycanthus floridus var.... 386 e-103
gb|AEX98290.1| ribosomal protein S3 (chloroplast) [Magnolia lili... 383 e-103
ref|YP_784425.1| ribosomal protein S3 [Drimys granadensis] gi|12... 380 e-102
ref|YP_009145017.1| ribosomal protein S3 (chloroplast) [Dieffenb... 376 e-100
gb|AEZ01463.1| ribosomal protein S3 (chloroplast) [Japonolirion ... 374 e-100
gb|AFB18583.1| ribosomal protein S3, partial [Neoastelia spectab... 374 e-100
ref|YP_007476086.1| ribosomal protein S3 [Dasypogon bromeliifoli... 374 e-100
ref|YP_009130166.1| ribosomal protein S3 (chloroplast) [Carludov... 373 1e-99
emb|CDY21179.1| BnaA01g34100D [Brassica napus] 265 3e-99
ref|YP_004769666.1| ribosomal protein S3 (chloroplast) [Spirodel... 371 3e-99
gb|AEX94265.1| ribosomal protein S2 (chloroplast) [Beaucarnea ho... 371 4e-99
gb|AGE93236.1| ribosomal protein S3 [Calectasia narragara] 370 7e-99
gb|AFB18582.1| ribosomal protein S3, partial [Navia saxicola] 370 7e-99
>gb|EPS74503.1| hypothetical protein M569_00220, partial [Genlisea aurea]
Length = 348
Score = 330 bits (846), Expect(2) = e-118
Identities = 164/220 (74%), Positives = 191/220 (86%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG QSH S+WF+QPK Y LQED+KIRD++K Y+QK IR++S EGI
Sbjct: 131 MGQKINPLGFRLGTTQSHYSIWFSQPKKYSKDLQEDQKIRDFLKNYIQKKIRITSGNEGI 190
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A IEIQK++DLIQVII++GFP LLIE + RGIEELQ+N+QK VNR+LNIAITR+
Sbjct: 191 --ARIEIQKRIDLIQVIIFMGFPKLLIENRPRGIEELQMNIQKEFPYVNRKLNIAITRIP 248
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYG P ILAE++A QLKNRVSFRKA+KKAIELTEQADTKGIQV+I+GRIDGKEIARVEW
Sbjct: 249 KPYGNPTILAEFLAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQISGRIDGKEIARVEW 308
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
+REGRVPLQTIRAKIDYCSYT RT YG LGIKIWI ++++
Sbjct: 309 MREGRVPLQTIRAKIDYCSYTARTIYGVLGIKIWICINKE 348
Score = 127 bits (320), Expect(2) = e-118
Identities = 69/111 (62%), Positives = 83/111 (74%)
Frame = -2
Query: 4872 TQVQALAQRICMSAHKARRVIDQIRGHSYEKTLMLLELMPYRAFYPIFKLVYSAAANASH 4693
T+V A Q I +S KARR+IDQIRG SYE+TL++LELM YRA YPI KLVYSAA+NA
Sbjct: 7 TEVYASGQHISISDDKARRIIDQIRGRSYEETLIILELMSYRACYPILKLVYSAASNARC 66
Query: 4692 NKSFNEADLVISKAEVNGGTIVKKLKPRARGRSYPIERPACHIIIVLKDSS 4540
++A+LVISKAEVN GT KK + RARGRS I++ CHI IV+KD S
Sbjct: 67 ILGSDKANLVISKAEVNKGTTRKKFQTRARGRSSAIKKATCHITIVVKDIS 117
>ref|YP_740241.1| ribosomal protein S3 [Liriodendron tulipifera]
gi|122239938|sp|Q0G9I0.1|RR3_LIRTU RecName: Full=30S
ribosomal protein S3, chloroplastic (chloroplast)
[Liriodendron tulipifera] gi|113201033|gb|ABI32548.1|
ribosomal protein S3 [Liriodendron tulipifera]
Length = 219
Score = 395 bits (1014), Expect = e-106
Identities = 203/221 (91%), Positives = 210/221 (95%), Gaps = 1/221 (0%)
Frame = -3
Query: 4436 MGQKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEG 4260
MGQKINPLGFRLG ENQ HRSLWFAQPKSY IGLQEDEKIRD IK YVQKN+R+SS FEG
Sbjct: 1 MGQKINPLGFRLGGENQKHRSLWFAQPKSYSIGLQEDEKIRDCIKNYVQKNMRISSGFEG 60
Query: 4259 IGIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRV 4080
I AHIEI+KK+DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG HSVNRRLNIAITRV
Sbjct: 61 I--AHIEIKKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFHSVNRRLNIAITRV 118
Query: 4079 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVE 3900
AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVE
Sbjct: 119 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVE 178
Query: 3899 WIREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
WIREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 179 WIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
>ref|YP_007474491.1| ribosomal protein S3 (chloroplast) [Magnolia officinalis subsp.
biloba] gi|452848895|ref|YP_007474575.1| ribosomal
protein S3 (chloroplast) [Magnolia grandiflora]
gi|619275774|ref|YP_009026920.1| ribosomal protein S3
(plastid) [Magnolia tripetala]
gi|372862543|gb|AEX98623.1| ribosomal protein S3
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862713|gb|AEX98791.1| ribosomal protein S3
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862882|gb|AEX98958.1| ribosomal protein S3
(chloroplast) [Magnolia grandiflora]
gi|372863052|gb|AEX99126.1| ribosomal protein S3
(chloroplast) [Magnolia grandiflora]
gi|608608442|gb|AHW51996.1| ribosomal protein S3
[Magnolia tripetala]
Length = 219
Score = 389 bits (1000), Expect = e-104
Identities = 201/221 (90%), Positives = 209/221 (94%), Gaps = 1/221 (0%)
Frame = -3
Query: 4436 MGQKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEG 4260
MG+KINPLGFRLG ENQ HRSLWFAQPK+Y IGLQEDEKIRD IK YVQKN R+SS FEG
Sbjct: 1 MGKKINPLGFRLGGENQKHRSLWFAQPKNYSIGLQEDEKIRDCIKNYVQKNRRISSGFEG 60
Query: 4259 IGIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRV 4080
I AHIEIQKK+DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG +SVNRRLNIAITRV
Sbjct: 61 I--AHIEIQKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFNSVNRRLNIAITRV 118
Query: 4079 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVE 3900
AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVE
Sbjct: 119 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVE 178
Query: 3899 WIREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
WIREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 179 WIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
>ref|YP_009048326.1| 30S ribosomal protein S3 (chloroplast) [Magnolia yunnanensis]
gi|573015541|gb|AHF72119.1| 30S ribosomal protein S3
(chloroplast) [Magnolia yunnanensis]
Length = 219
Score = 389 bits (999), Expect = e-104
Identities = 201/221 (90%), Positives = 208/221 (94%), Gaps = 1/221 (0%)
Frame = -3
Query: 4436 MGQKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEG 4260
MG+KINPLGFRLG ENQ HRSLWFAQ K+Y IGLQEDEKIRD IK YVQKN R+SS FEG
Sbjct: 1 MGKKINPLGFRLGGENQKHRSLWFAQTKNYSIGLQEDEKIRDCIKNYVQKNRRISSGFEG 60
Query: 4259 IGIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRV 4080
I AHIEIQKK+DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG HSVNRRLNIAITRV
Sbjct: 61 I--AHIEIQKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFHSVNRRLNIAITRV 118
Query: 4079 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVE 3900
AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVE
Sbjct: 119 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVE 178
Query: 3899 WIREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
WIREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 179 WIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
>gb|AEX98707.1| ribosomal protein S3 (chloroplast) [Magnolia officinalis subsp.
biloba]
Length = 219
Score = 389 bits (998), Expect = e-104
Identities = 201/221 (90%), Positives = 208/221 (94%), Gaps = 1/221 (0%)
Frame = -3
Query: 4436 MGQKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEG 4260
MG+KINPLGFRLG ENQ HRSLWFAQPK+Y IGLQEDEKIRD IK YVQKN R+SS FEG
Sbjct: 1 MGKKINPLGFRLGGENQKHRSLWFAQPKNYSIGLQEDEKIRDCIKNYVQKNRRISSGFEG 60
Query: 4259 IGIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRV 4080
I AHIEIQKK DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG +SVNRRLNIAITRV
Sbjct: 61 I--AHIEIQKKYDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFNSVNRRLNIAITRV 118
Query: 4079 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVE 3900
AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVE
Sbjct: 119 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVE 178
Query: 3899 WIREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
WIREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 179 WIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
>ref|YP_004769753.1| ribosomal protein S3 [Magnolia kwangsiensis]
gi|302424219|gb|ADL39095.1| ribosomal protein S3
[Magnolia kwangsiensis]
Length = 219
Score = 389 bits (998), Expect = e-104
Identities = 200/221 (90%), Positives = 209/221 (94%), Gaps = 1/221 (0%)
Frame = -3
Query: 4436 MGQKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEG 4260
MG+KINPLGFRLG +NQ HRSLWFAQPK+Y IGLQEDEKIRD IK YVQKN R+SS FEG
Sbjct: 1 MGKKINPLGFRLGGQNQKHRSLWFAQPKNYSIGLQEDEKIRDCIKNYVQKNSRISSGFEG 60
Query: 4259 IGIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRV 4080
I AHIEIQKK+DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG +SVNRRLNIAITRV
Sbjct: 61 I--AHIEIQKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFNSVNRRLNIAITRV 118
Query: 4079 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVE 3900
AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVE
Sbjct: 119 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVE 178
Query: 3899 WIREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
WIREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 179 WIREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
>ref|YP_006576153.1| ribosomal protein S3 (chloroplast) [Magnolia denudata]
gi|343887577|gb|AEM65256.1| ribosomal protein S3
[Magnolia denudata] gi|372862290|gb|AEX98373.1| ribosomal
protein S3 (chloroplast) [Magnolia denudata]
Length = 219
Score = 387 bits (994), Expect = e-104
Identities = 200/221 (90%), Positives = 208/221 (94%), Gaps = 1/221 (0%)
Frame = -3
Query: 4436 MGQKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEG 4260
MG+KINPLGFRLG ENQ HRSLWFAQPK+Y IGLQEDEKIRD IK YVQKN R+SS FEG
Sbjct: 1 MGKKINPLGFRLGGENQKHRSLWFAQPKNYSIGLQEDEKIRDCIKNYVQKNRRISSGFEG 60
Query: 4259 IGIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRV 4080
I AHIEIQKK+DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG +SVNRRLNIAITRV
Sbjct: 61 I--AHIEIQKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFNSVNRRLNIAITRV 118
Query: 4079 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVE 3900
AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVE
Sbjct: 119 AKPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVE 178
Query: 3899 WIREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
WIREGRVPLQTIRAKID+CSY VRT YG LGIKIWIFVDEQ
Sbjct: 179 WIREGRVPLQTIRAKIDHCSYPVRTIYGVLGIKIWIFVDEQ 219
>ref|NP_862792.1| ribosomal protein S3 [Calycanthus floridus var. glaucus]
gi|68052981|sp|Q7YJU0.1|RR3_CALFG RecName: Full=30S
ribosomal protein S3, chloroplastic (chloroplast)
[Calycanthus floridus var. glaucus]
gi|32399417|emb|CAD28759.1| ribosomal protein S3
[Calycanthus floridus var. glaucus]
Length = 218
Score = 386 bits (992), Expect = e-103
Identities = 198/220 (90%), Positives = 203/220 (92%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLGENQSH SLWFAQPKSY GLQEDEKIRD IKIYVQKN+R+SS FEGI
Sbjct: 1 MGQKINPLGFRLGENQSHHSLWFAQPKSYCRGLQEDEKIRDCIKIYVQKNMRISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
AHIEIQKKMDLIQVII IGFPN LIEG TRGIEELQ+NVQK HS NRRLNIAITRVA
Sbjct: 61 --AHIEIQKKMDLIQVIISIGFPNFLIEGGTRGIEELQMNVQKRFHSANRRLNIAITRVA 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIA QLKNRVSFRKAMKK IELTEQADTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIARQLKNRVSFRKAMKKVIELTEQADTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 179 IREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 218
>gb|AEX98290.1| ribosomal protein S3 (chloroplast) [Magnolia liliiflora]
Length = 253
Score = 383 bits (983), Expect(2) = e-103
Identities = 198/219 (90%), Positives = 206/219 (94%), Gaps = 1/219 (0%)
Frame = -3
Query: 4430 QKINPLGFRLG-ENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGIG 4254
+KINPLGFRLG ENQ HRSLWFAQPK+Y IGLQEDEKIRD IK YVQKN R+SS FEGI
Sbjct: 37 KKINPLGFRLGGENQKHRSLWFAQPKNYSIGLQEDEKIRDCIKNYVQKNRRISSGFEGI- 95
Query: 4253 IAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVAK 4074
AHIEIQKK+DLIQVIIYIGFPNLLIEG+TRGIEELQINVQKG +SVNRRLNIAITRVAK
Sbjct: 96 -AHIEIQKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFNSVNRRLNIAITRVAK 154
Query: 4073 PYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEWI 3894
PYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVEWI
Sbjct: 155 PYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWI 214
Query: 3893 REGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
REGRVPLQTIRAKID+CSY VRT YG LGIKIWIFVDEQ
Sbjct: 215 REGRVPLQTIRAKIDHCSYPVRTIYGVLGIKIWIFVDEQ 253
Score = 24.6 bits (52), Expect(2) = e-103
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 4516 IFRNKKCMERSYN 4478
+FRNK MERSYN
Sbjct: 1 MFRNKGSMERSYN 13
>ref|YP_784425.1| ribosomal protein S3 [Drimys granadensis]
gi|122164402|sp|Q06GV8.1|RR3_DRIGR RecName: Full=30S
ribosomal protein S3, chloroplastic (chloroplast) [Drimys
granadensis] gi|112032700|gb|ABH88335.1| ribosomal
protein S3 [Drimys granadensis]
Length = 216
Score = 380 bits (976), Expect = e-102
Identities = 195/220 (88%), Positives = 204/220 (92%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MG+KINPLGFRLG NQSHRSLWFAQPKSY GLQEDEKIRD IK YVQKN+R S
Sbjct: 1 MGKKINPLGFRLGANQSHRSLWFAQPKSYSRGLQEDEKIRDCIKNYVQKNMRSGSE---- 56
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
GI+HIEI+KK+DLIQVIIYIGFPNLLIEG+TRGIEEL+INVQKG SVNRRLNIAITRVA
Sbjct: 57 GISHIEIKKKIDLIQVIIYIGFPNLLIEGRTRGIEELRINVQKGFRSVNRRLNIAITRVA 116
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQV+IAGRIDGKEIARVEW
Sbjct: 117 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEW 176
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYTVRT YG LGIKIWIFVDEQ
Sbjct: 177 IREGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 216
>ref|YP_009145017.1| ribosomal protein S3 (chloroplast) [Dieffenbachia seguine]
gi|827504874|gb|AKJ83460.1| ribosomal protein S3
(chloroplast) [Dieffenbachia seguine]
Length = 218
Score = 376 bits (965), Expect = e-100
Identities = 190/218 (87%), Positives = 201/218 (92%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG Q+H S WFAQPKS+ IGLQEDEKIRD IK YVQKN+R+SS FEGI
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKSFSIGLQEDEKIRDCIKNYVQKNMRISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
AHIEIQK++DLIQVIIYIGFPNLLIEG+ RGIEELQ NVQK L+S+NRRLNIAITRV
Sbjct: 61 --AHIEIQKRIDLIQVIIYIGFPNLLIEGRRRGIEELQTNVQKELNSINRRLNIAITRVE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIAR+EW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARIEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVD 3783
IREGRVPLQTIRAKIDYCSYTVRT YG LGIKIWIFVD
Sbjct: 179 IREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVD 216
>gb|AEZ01463.1| ribosomal protein S3 (chloroplast) [Japonolirion osense]
gi|576090100|gb|AHH24312.1| ribosomal protein S3
(chloroplast) [Japonolirion osense]
Length = 218
Score = 374 bits (961), Expect = e-100
Identities = 188/220 (85%), Positives = 202/220 (91%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG QSH S WFAQPK+Y +GLQEDEKIRD IK YVQKN+R+SS FEGI
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYSMGLQEDEKIRDCIKNYVQKNMRISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A I IQK++DLIQVIIYIGFPNLLIEG+TRGIEELQ+NVQK HSVNRRLNIAITRV
Sbjct: 61 --ARIRIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQMNVQKEFHSVNRRLNIAITRVE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEY+ALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+I+GRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYMALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQISGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYT+RT YG LGIKIWIFVDE+
Sbjct: 179 IREGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218
>gb|AFB18583.1| ribosomal protein S3, partial [Neoastelia spectabilis]
Length = 218
Score = 374 bits (960), Expect = e-100
Identities = 189/220 (85%), Positives = 201/220 (91%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG NQSH S WFAQPK++ GLQEDEKIR+ IK YVQKN R+SS FEGI
Sbjct: 1 MGQKINPLGFRLGTNQSHNSFWFAQPKNFSAGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A I IQK++DLIQVIIYIGFPNLLIEG+TRGIEELQ+NVQK HSVNRRLNIAITR+
Sbjct: 61 --ARIGIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQMNVQKEFHSVNRRLNIAITRIE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKIDYCSYT+RT YG LGIKIWIFVDE+
Sbjct: 179 IREGRVPLQTIRAKIDYCSYTIRTIYGVLGIKIWIFVDEE 218
>ref|YP_007476086.1| ribosomal protein S3 [Dasypogon bromeliifolius]
gi|376011651|gb|AFB18570.1| ribosomal protein S3
[Dasypogon bromeliifolius] gi|449326569|gb|AGE93150.1|
ribosomal protein S3 [Dasypogon bromeliifolius]
Length = 218
Score = 374 bits (959), Expect = e-100
Identities = 187/220 (85%), Positives = 201/220 (91%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG QSH S WFAQPK Y +GLQED+KIR+ IK YVQKN R+S FEGI
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKKYSVGLQEDDKIRNCIKNYVQKNKRISLGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A IEI+K++DLIQV+IYIGFPNLLIEGQTRGIEELQINVQKGLHSVN +LNIAITRV
Sbjct: 61 --ARIEIKKRIDLIQVLIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNHKLNIAITRVE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYT+RT YG LGIKIWIF+DE+
Sbjct: 179 IREGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFIDEE 218
>ref|YP_009130166.1| ribosomal protein S3 (chloroplast) [Carludovica palmata]
gi|768803835|gb|AJV88635.1| ribosomal protein S3
(chloroplast) [Carludovica palmata]
Length = 218
Score = 373 bits (957), Expect = 1e-99
Identities = 189/220 (85%), Positives = 200/220 (90%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG QSH S WFAQPK+Y +GLQEDEKIRD IK YVQKN R+SS FEGI
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYSVGLQEDEKIRDCIKNYVQKNRRISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A I IQK++DLIQVII+IGFPNLLIEG+TRGIEELQINVQK HSVNRR NIAITRV
Sbjct: 61 --ARIGIQKRIDLIQVIIHIGFPNLLIEGRTRGIEELQINVQKEFHSVNRRFNIAITRVE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYT+RT YG LGIKIWIFVDE+
Sbjct: 179 IREGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218
>emb|CDY21179.1| BnaA01g34100D [Brassica napus]
Length = 266
Score = 265 bits (678), Expect(2) = 3e-99
Identities = 126/142 (88%), Positives = 133/142 (93%)
Frame = -1
Query: 5776 THMPLGTAVHNIEITLGKGGQLTRAAGAVAKLIAKEGKSVTLRFPSGEVRLISKNCSATV 5597
T MPLGTA+HNIEITLGKGGQL RAAGAVAKLIAKEGKS TL+ PSGEVRLISKNCSATV
Sbjct: 44 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATV 103
Query: 5596 GQVGNVGANQKSLGRAGSKCWLGRRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGY 5417
GQVGNVG NQKSLGRAGSKCWLG+RPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGY
Sbjct: 104 GQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGY 163
Query: 5416 PALGRKSRKRNKYSNSFIIRRR 5351
PALGR++RKR KYS + I+RRR
Sbjct: 164 PALGRRTRKRKKYSETLILRRR 185
Score = 128 bits (322), Expect(2) = 3e-99
Identities = 59/79 (74%), Positives = 69/79 (87%)
Frame = -3
Query: 5231 HLLEKIKKLNMREEKEIIVTWSRASTIIPTMIGNTIAIHNGKAHLPIYITDRMVGQKLGE 5052
HLL KI+KLN + EKEII+TWSRASTIIPTMIG+TIAIHNG+ HLP+YI D MVG KLGE
Sbjct: 188 HLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGE 247
Query: 5051 FAPTLTFQGHARNDTRSLR 4995
F+PT+ F+GHA+ND RS R
Sbjct: 248 FSPTINFRGHAKNDNRSRR 266
>ref|YP_004769666.1| ribosomal protein S3 (chloroplast) [Spirodela polyrhiza]
gi|341834107|gb|AEK94378.1| ribosomal protein S3
(chloroplast) [Spirodela polyrhiza]
Length = 218
Score = 371 bits (953), Expect = 3e-99
Identities = 189/218 (86%), Positives = 200/218 (91%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG Q+H S WFAQPKS+ IGLQEDEKIRD IK YVQKN+R+SS FEGI
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKSFSIGLQEDEKIRDCIKNYVQKNMRISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A IEIQK++DLIQV+I+IGFPNLLIEG+ RGIEELQ NVQK L+SVNRRLNIAITRV
Sbjct: 61 --ARIEIQKRIDLIQVVIHIGFPNLLIEGRRRGIEELQTNVQKELNSVNRRLNIAITRVE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVD 3783
IREGRVPLQTIRAKIDYCSYTVRT YG LGIKIWIFVD
Sbjct: 179 IREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVD 216
>gb|AEX94265.1| ribosomal protein S2 (chloroplast) [Beaucarnea hookeri]
Length = 220
Score = 371 bits (952), Expect = 4e-99
Identities = 181/220 (82%), Positives = 202/220 (91%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG Q+H S WFAQPK++Y+GLQEDEKIR+ IK YVQKN R+S FEGI
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNFYVGLQEDEKIRNCIKNYVQKNKRISPGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
GIA IEIQK++DLIQVIIYIGFPNLLIEG+TRGIEELQ+NVQK HSVNRRLNIAITRV
Sbjct: 61 GIARIEIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQMNVQKEFHSVNRRLNIAITRVE 120
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYG PNILAEY+A QL+NRVSFRKAMK+AIELTEQ DTKGIQ++IAGRIDGKEIARVEW
Sbjct: 121 KPYGHPNILAEYMASQLRNRVSFRKAMKRAIELTEQTDTKGIQIQIAGRIDGKEIARVEW 180
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYT+RT +G LG+KIWIFV+E+
Sbjct: 181 IREGRVPLQTIRAKIDHCSYTIRTIHGVLGLKIWIFVNEE 220
>gb|AGE93236.1| ribosomal protein S3 [Calectasia narragara]
Length = 218
Score = 370 bits (950), Expect = 7e-99
Identities = 187/220 (85%), Positives = 200/220 (90%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG QSH S WFAQPK+Y +GLQED+KIR+ IK YVQKN R+S SFEGI
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYSVGLQEDDKIRNCIKNYVQKNRRISLSFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A IEIQK++DLIQVIIYIGFPNLLIEGQ RGIEELQ+NVQK HSVN +LNIAITRV
Sbjct: 61 --ARIEIQKRIDLIQVIIYIGFPNLLIEGQRRGIEELQMNVQKEFHSVNHKLNIAITRVE 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTIRAKID+CSYT+RT YG LGIKIWIFVDE+
Sbjct: 179 IREGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218
>gb|AFB18582.1| ribosomal protein S3, partial [Navia saxicola]
Length = 218
Score = 370 bits (950), Expect = 7e-99
Identities = 188/220 (85%), Positives = 199/220 (90%)
Frame = -3
Query: 4436 MGQKINPLGFRLGENQSHRSLWFAQPKSYYIGLQEDEKIRDWIKIYVQKNIRVSSSFEGI 4257
MGQKINPLGFRLG QSH S WFAQPK+Y GLQEDEKIR+ IK YVQKN ++SS FEGI
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYSAGLQEDEKIRNCIKNYVQKNRKISSGFEGI 60
Query: 4256 GIAHIEIQKKMDLIQVIIYIGFPNLLIEGQTRGIEELQINVQKGLHSVNRRLNIAITRVA 4077
A I I+KK+DLIQVIIYIGFPNLLIEGQTRGIEELQ+NVQK HSVNRRLNIAITRV
Sbjct: 61 --ARITIKKKIDLIQVIIYIGFPNLLIEGQTRGIEELQMNVQKEFHSVNRRLNIAITRVK 118
Query: 4076 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVEIAGRIDGKEIARVEW 3897
KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQ DTKGIQV+IAGRIDGKEIARVEW
Sbjct: 119 KPYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEW 178
Query: 3896 IREGRVPLQTIRAKIDYCSYTVRTAYGALGIKIWIFVDEQ 3777
IREGRVPLQTI AKID+CSYT+RT YG LGIKIWIFVDE+
Sbjct: 179 IREGRVPLQTIHAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218