BLASTX nr result

ID: Cinnamomum24_contig00003805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00003805
         (486 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402858.1| PREDICTED: cleavage and polyadenylation spec...    86   1e-14
ref|XP_010930313.1| PREDICTED: cleavage and polyadenylation spec...    84   3e-14
ref|XP_009348761.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_007042279.1| Cleavage and polyadenylation specificity fac...    84   5e-14
ref|XP_010112439.1| Cleavage and polyadenylation specificity fac...    83   8e-14
ref|XP_012463815.1| PREDICTED: cleavage and polyadenylation spec...    83   8e-14
ref|XP_002323824.2| cleavage and polyadenylation specificity fac...    83   8e-14
gb|KHG21690.1| Cleavage and polyadenylation specificity factor s...    82   1e-13
ref|XP_009355263.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
emb|CDY03781.1| BnaC01g28980D [Brassica napus]                         82   1e-13
ref|XP_009104294.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_008801787.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_008801179.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_008357672.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_008350385.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...    82   1e-13
ref|XP_008339502.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_008378882.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_008218575.1| PREDICTED: cleavage and polyadenylation spec...    82   1e-13
ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation spec...    82   2e-13
ref|XP_008802128.1| PREDICTED: cleavage and polyadenylation spec...    81   2e-13

>ref|XP_009402858.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Musa acuminata subsp. malaccensis]
          Length = 699

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           EGKL+VTVDG+VAR+D K+G+VE DNE LKERV+TAF RIQSAV+PIPLSAS
Sbjct: 648 EGKLIVTVDGDVARLDGKNGEVECDNEGLKERVKTAFRRIQSAVRPIPLSAS 699


>ref|XP_010930313.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Elaeis guineensis]
          Length = 696

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           EGKLVVTVDG+VAR+D K+G+VE +NE LKERV+TAF RIQSAV+PIPLSAS
Sbjct: 645 EGKLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFRRIQSAVRPIPLSAS 696


>ref|XP_009348761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like, partial [Pyrus x bretschneideri]
          Length = 684

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 39/51 (76%), Positives = 48/51 (94%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGN+A++D +SGDVES+NE LKERV+TAFHRIQSAVKPIPL A+
Sbjct: 634 GKLVISVDGNMAQLDKQSGDVESENEGLKERVKTAFHRIQSAVKPIPLPAT 684


>ref|XP_007042279.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
           cacao] gi|508706214|gb|EOX98110.1| Cleavage and
           polyadenylation specificity factor 73-I [Theobroma
           cacao]
          Length = 694

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKL+++VDGNVA +D +SGDVES+NE LKERV+TAF RIQSAVKPIPLSAS
Sbjct: 644 GKLMISVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSAS 694


>ref|XP_010112439.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
           notabilis] gi|587947328|gb|EXC33626.1| Cleavage and
           polyadenylation specificity factor subunit 3-I [Morus
           notabilis]
          Length = 693

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GK+++ VDGNVA++D +SGDVES+NE LKERVRTAF RIQSAVKPIPLS+S
Sbjct: 643 GKIMINVDGNVAQLDKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLSSS 693


>ref|XP_012463815.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Gossypium raimondii] gi|763812391|gb|KJB79243.1|
           hypothetical protein B456_013G039200 [Gossypium
           raimondii]
          Length = 694

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKL+V+VDGNVA +D +SGDVES+NE LKERV+TAF RIQSAVKPIPLS+S
Sbjct: 644 GKLMVSVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSSS 694


>ref|XP_002323824.2| cleavage and polyadenylation specificity factor family protein
           [Populus trichocarpa] gi|550320034|gb|EEF03957.2|
           cleavage and polyadenylation specificity factor family
           protein [Populus trichocarpa]
          Length = 695

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA +D +SGDVES+NE LKERVRTAF RIQSAV+PIPL AS
Sbjct: 645 GKLVISVDGNVAELDKQSGDVESENEGLKERVRTAFRRIQSAVRPIPLPAS 695


>gb|KHG21690.1| Cleavage and polyadenylation specificity factor subunit 3-I -like
           protein [Gossypium arboreum]
          Length = 694

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKL+V+VDGNVA +D +SGDVES+NE LKERV+TAF RIQSAVKPIPLS+S
Sbjct: 644 GKLMVSVDGNVALLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSSS 694


>ref|XP_009355263.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Pyrus x bretschneideri]
          Length = 696

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAF RIQSAVKPIPL A+
Sbjct: 646 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT 696


>emb|CDY03781.1| BnaC01g28980D [Brassica napus]
          Length = 691

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSA 155
           GKLV++VDGNVA +D +SGDVE ++E LKERVR AFHRIQSAVKPIPLSA
Sbjct: 641 GKLVISVDGNVAHLDKESGDVEGEHEGLKERVRVAFHRIQSAVKPIPLSA 690


>ref|XP_009104294.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Brassica rapa] gi|674863670|emb|CDY68459.1|
           BnaAnng27360D [Brassica napus]
          Length = 694

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSA 155
           GKLV++VDGNVA +D +SGDVE ++E LKERVR AFHRIQSAVKPIPLSA
Sbjct: 644 GKLVISVDGNVAHLDKESGDVEGEHEGLKERVRVAFHRIQSAVKPIPLSA 693


>ref|XP_008801787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Phoenix dactylifera]
          Length = 587

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           EG LVVTVDG+VAR+D K+G+VE +NE LKERV+TAF RIQSAV+PIPLSAS
Sbjct: 536 EGTLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFRRIQSAVRPIPLSAS 587


>ref|XP_008801179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Phoenix dactylifera]
          Length = 696

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           EG LVVTVDG+VAR+D K+G+VE +NE LKERV+TAF RIQSAV+PIPLSAS
Sbjct: 645 EGTLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFRRIQSAVRPIPLSAS 696


>ref|XP_008357672.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Malus domestica]
          Length = 642

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAF RIQSAVKPIPL A+
Sbjct: 592 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT 642


>ref|XP_008350385.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 3-I-like [Malus domestica]
          Length = 615

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAF RIQSAVKPIPL A+
Sbjct: 565 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLPAT 615


>ref|XP_008339502.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Malus domestica]
          Length = 697

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAF RIQSAVKPIPL A+
Sbjct: 647 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLXAT 697


>ref|XP_008378882.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Malus domestica]
          Length = 696

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAF RIQSAVKPIPL A+
Sbjct: 646 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT 696


>ref|XP_008218575.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Prunus mume]
          Length = 692

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+ AF RIQSAVKPIPLSA+
Sbjct: 642 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKAAFRRIQSAVKPIPLSAT 692


>ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +3

Query: 6   GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAF RIQSAV+PIPL AS
Sbjct: 643 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVRPIPLFAS 693


>ref|XP_008802128.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Phoenix dactylifera]
          Length = 622

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFHRIQSAVKPIPLSAS 158
           EG LVVTVDG+VAR+D K+G+VE +NE LKERV+TAF RIQSAV+PIPLSAS
Sbjct: 571 EGTLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFGRIQSAVRPIPLSAS 622


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