BLASTX nr result

ID: Cinnamomum24_contig00003803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00003803
         (564 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402858.1| PREDICTED: cleavage and polyadenylation spec...    87   4e-15
ref|XP_010930313.1| PREDICTED: cleavage and polyadenylation spec...    86   8e-15
ref|XP_007042279.1| Cleavage and polyadenylation specificity fac...    86   1e-14
ref|XP_010112439.1| Cleavage and polyadenylation specificity fac...    85   2e-14
ref|XP_012463815.1| PREDICTED: cleavage and polyadenylation spec...    85   2e-14
ref|XP_002323824.2| cleavage and polyadenylation specificity fac...    85   2e-14
gb|KHG21690.1| Cleavage and polyadenylation specificity factor s...    84   4e-14
ref|XP_009355263.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_008801787.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_008801179.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_008357672.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_008350385.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...    84   4e-14
ref|XP_008339502.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_008378882.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_008218575.1| PREDICTED: cleavage and polyadenylation spec...    84   4e-14
ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation spec...    84   5e-14
ref|XP_008218571.1| PREDICTED: cleavage and polyadenylation spec...    83   7e-14
gb|EMT17383.1| Cleavage and polyadenylation specificity factor s...    83   7e-14
ref|XP_010065378.1| PREDICTED: cleavage and polyadenylation spec...    83   9e-14
ref|XP_010065373.1| PREDICTED: cleavage and polyadenylation spec...    83   9e-14

>ref|XP_009402858.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Musa acuminata subsp. malaccensis]
          Length = 699

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 42/52 (80%), Positives = 49/52 (94%)
 Frame = -3

Query: 562 EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           EGKL+VTVDG+VAR+D K+G+VE DNE LKERV+TAFRRIQSAV+PIPLSAS
Sbjct: 648 EGKLIVTVDGDVARLDGKNGEVECDNEGLKERVKTAFRRIQSAVRPIPLSAS 699


>ref|XP_010930313.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Elaeis guineensis]
          Length = 696

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 42/52 (80%), Positives = 49/52 (94%)
 Frame = -3

Query: 562 EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           EGKLVVTVDG+VAR+D K+G+VE +NE LKERV+TAFRRIQSAV+PIPLSAS
Sbjct: 645 EGKLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFRRIQSAVRPIPLSAS 696


>ref|XP_007042279.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
           cacao] gi|508706214|gb|EOX98110.1| Cleavage and
           polyadenylation specificity factor 73-I [Theobroma
           cacao]
          Length = 694

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKL+++VDGNVA +D +SGDVES+NE LKERV+TAFRRIQSAVKPIPLSAS
Sbjct: 644 GKLMISVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSAS 694


>ref|XP_010112439.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
           notabilis] gi|587947328|gb|EXC33626.1| Cleavage and
           polyadenylation specificity factor subunit 3-I [Morus
           notabilis]
          Length = 693

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GK+++ VDGNVA++D +SGDVES+NE LKERVRTAFRRIQSAVKPIPLS+S
Sbjct: 643 GKIMINVDGNVAQLDKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLSSS 693


>ref|XP_012463815.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I [Gossypium raimondii] gi|763812391|gb|KJB79243.1|
           hypothetical protein B456_013G039200 [Gossypium
           raimondii]
          Length = 694

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKL+V+VDGNVA +D +SGDVES+NE LKERV+TAFRRIQSAVKPIPLS+S
Sbjct: 644 GKLMVSVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSSS 694


>ref|XP_002323824.2| cleavage and polyadenylation specificity factor family protein
           [Populus trichocarpa] gi|550320034|gb|EEF03957.2|
           cleavage and polyadenylation specificity factor family
           protein [Populus trichocarpa]
          Length = 695

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA +D +SGDVES+NE LKERVRTAFRRIQSAV+PIPL AS
Sbjct: 645 GKLVISVDGNVAELDKQSGDVESENEGLKERVRTAFRRIQSAVRPIPLPAS 695


>gb|KHG21690.1| Cleavage and polyadenylation specificity factor subunit 3-I -like
           protein [Gossypium arboreum]
          Length = 694

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKL+V+VDGNVA +D +SGDVES+NE LKERV+TAFRRIQSAVKPIPLS+S
Sbjct: 644 GKLMVSVDGNVALLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSSS 694


>ref|XP_009355263.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Pyrus x bretschneideri]
          Length = 696

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAFRRIQSAVKPIPL A+
Sbjct: 646 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT 696


>ref|XP_008801787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Phoenix dactylifera]
          Length = 587

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = -3

Query: 562 EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           EG LVVTVDG+VAR+D K+G+VE +NE LKERV+TAFRRIQSAV+PIPLSAS
Sbjct: 536 EGTLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFRRIQSAVRPIPLSAS 587


>ref|XP_008801179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Phoenix dactylifera]
          Length = 696

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = -3

Query: 562 EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           EG LVVTVDG+VAR+D K+G+VE +NE LKERV+TAFRRIQSAV+PIPLSAS
Sbjct: 645 EGTLVVTVDGDVARLDGKNGEVECENEGLKERVKTAFRRIQSAVRPIPLSAS 696


>ref|XP_008357672.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Malus domestica]
          Length = 642

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAFRRIQSAVKPIPL A+
Sbjct: 592 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT 642


>ref|XP_008350385.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 3-I-like [Malus domestica]
          Length = 615

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAFRRIQSAVKPIPL A+
Sbjct: 565 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLPAT 615


>ref|XP_008339502.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Malus domestica]
          Length = 697

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAFRRIQSAVKPIPL A+
Sbjct: 647 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLXAT 697


>ref|XP_008378882.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Malus domestica]
          Length = 696

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAFRRIQSAVKPIPL A+
Sbjct: 646 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT 696


>ref|XP_008218575.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Prunus mume]
          Length = 692

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+ AFRRIQSAVKPIPLSA+
Sbjct: 642 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKAAFRRIQSAVKPIPLSAT 692


>ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV++VDGNVA++D +SGDVES+NE LKERV+TAFRRIQSAV+PIPL AS
Sbjct: 643 GKLVISVDGNVAQLDKQSGDVESENEGLKERVKTAFRRIQSAVRPIPLFAS 693


>ref|XP_008218571.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Prunus mume]
          Length = 692

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV+ VDGNVA++D +SGDVES+NE LKERV+ AFRRIQSAVKPIPLSA+
Sbjct: 642 GKLVIRVDGNVAQLDKQSGDVESENEGLKERVKAAFRRIQSAVKPIPLSAT 692


>gb|EMT17383.1| Cleavage and polyadenylation specificity factor subunit 3 [Aegilops
           tauschii]
          Length = 720

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = -3

Query: 562 EGKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           EGKLV+TVDG+VA +D +SGDVES+N  LKER++TAFRRIQ AV+PIPLSAS
Sbjct: 669 EGKLVITVDGDVAHLDGRSGDVESENAGLKERIKTAFRRIQGAVRPIPLSAS 720


>ref|XP_010065378.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like isoform X2 [Eucalyptus grandis]
          Length = 575

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV+ VDGNVA +D +SGDVES+NE LKERVRTAFR+IQSAVKPI LSAS
Sbjct: 525 GKLVINVDGNVAHLDKQSGDVESENEGLKERVRTAFRQIQSAVKPISLSAS 575


>ref|XP_010065373.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like isoform X1 [Eucalyptus grandis]
           gi|702389089|ref|XP_010065374.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 3-I-like
           isoform X1 [Eucalyptus grandis]
           gi|702389095|ref|XP_010065376.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 3-I-like
           isoform X1 [Eucalyptus grandis]
           gi|702389101|ref|XP_010065377.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 3-I-like
           isoform X1 [Eucalyptus grandis]
           gi|629097048|gb|KCW62813.1| hypothetical protein
           EUGRSUZ_G00401 [Eucalyptus grandis]
          Length = 694

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = -3

Query: 559 GKLVVTVDGNVARVDSKSGDVESDNENLKERVRTAFRRIQSAVKPIPLSAS 407
           GKLV+ VDGNVA +D +SGDVES+NE LKERVRTAFR+IQSAVKPI LSAS
Sbjct: 644 GKLVINVDGNVAHLDKQSGDVESENEGLKERVRTAFRQIQSAVKPISLSAS 694


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