BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00003716
         (3023 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010916255.1| PREDICTED: nuclear poly(A) polymerase 1 [Ela...  1001   0.0  
ref|XP_010265872.1| PREDICTED: poly(A) polymerase PAPalpha-like ...   999   0.0  
ref|XP_009387260.1| PREDICTED: poly(A) polymerase PAPalpha isofo...   991   0.0  
ref|XP_010257444.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) poly...   991   0.0  
ref|XP_008775850.1| PREDICTED: poly(A) polymerase PAPalpha [Phoe...   981   0.0  
ref|XP_002279968.2| PREDICTED: nuclear poly(A) polymerase 1 [Vit...   971   0.0  
ref|XP_007036647.1| Poly(A) polymerase 1 isoform 1 [Theobroma ca...   968   0.0  
ref|XP_011009627.1| PREDICTED: nuclear poly(A) polymerase 1 [Pop...   964   0.0  
ref|XP_012486421.1| PREDICTED: nuclear poly(A) polymerase 1 isof...   956   0.0  
ref|XP_002322074.2| hypothetical protein POPTR_0015s04100g [Popu...   956   0.0  
gb|KJB37195.1| hypothetical protein B456_006G193600 [Gossypium r...   950   0.0  
ref|XP_010110105.1| Poly(A) polymerase [Morus notabilis] gi|5879...   943   0.0  
emb|CDO98397.1| unnamed protein product [Coffea canephora]            941   0.0  
ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like isoform X...   940   0.0  
ref|XP_004512881.1| PREDICTED: nuclear poly(A) polymerase 1 [Cic...   936   0.0  
ref|XP_011627554.1| PREDICTED: nuclear poly(A) polymerase 1 [Amb...   934   0.0  
ref|XP_010036910.1| PREDICTED: poly(A) polymerase type 3 [Eucaly...   934   0.0  
ref|XP_004137491.1| PREDICTED: nuclear poly(A) polymerase 1 isof...   934   0.0  
ref|XP_007210342.1| hypothetical protein PRUPE_ppa001856mg [Prun...   934   0.0  
ref|XP_009387262.1| PREDICTED: poly(A) polymerase PAPalpha isofo...   934   0.0  

>ref|XP_010916255.1| PREDICTED: nuclear poly(A) polymerase 1 [Elaeis guineensis]
          Length = 768

 Score = 1001 bits (2587), Expect = 0.0
 Identities = 531/786 (67%), Positives = 584/786 (74%), Gaps = 34/786 (4%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M S+GL  R NG  YLGVTEPIS  GP+EFD+ KT ELEK LAD GLYESQEEAVSREEV
Sbjct: 1    MASSGLAKRGNG--YLGVTEPISWSGPTEFDITKTHELEKYLADAGLYESQEEAVSREEV 58

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVKKVSRAKGFNEQ V EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 59   LGRLDQIVKVWVKKVSRAKGFNEQFVLEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 118

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL NML EMPEVTELHPVPDAHVPVMKFKF+GVSIDLLYAKLSLWVIPEDLD
Sbjct: 119  TREEDFFTELHNMLAEMPEVTELHPVPDAHVPVMKFKFNGVSIDLLYAKLSLWVIPEDLD 178

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRC+RFWAKRRGVYSNV+GF
Sbjct: 179  ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCLRFWAKRRGVYSNVAGF 238

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYP ALPSMLV+RFFRVYTQWRWPNPVMLC IEEG+LGLP+WDPR
Sbjct: 239  LGGINWALLVARICQLYPKALPSMLVSRFFRVYTQWRWPNPVMLCDIEEGTLGLPVWDPR 298

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +N +DRLHQMPIITPAYPCMNSSYNV SSTLRVMTEEFQRG+EICE M+ NKADW+ LF 
Sbjct: 299  KNYKDRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRGHEICEEMEANKADWNKLFA 358

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYK+YLEIDITA NEDDLRKWKGWVESRLR LTLKIERHTFGMLQCHPHPGDFS
Sbjct: 359  PYPFFEAYKHYLEIDITAANEDDLRKWKGWVESRLRTLTLKIERHTFGMLQCHPHPGDFS 418

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFHCC+FMGLQRKQG P NEGEQFDIR TVEEFKHSVG YTLWK GMEIQVSHI+R
Sbjct: 419  DKSRPFHCCYFMGLQRKQGVPVNEGEQFDIRVTVEEFKHSVGMYTLWKPGMEIQVSHIKR 478

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKA---------SDTVQADKNVGVADETRK 850
            RN+P FVFPGG RPSRP K  G +G ++ K K+         SDT+    +  +AD++  
Sbjct: 479  RNVPSFVFPGGTRPSRPLKAAGSEGHTISKTKSSSLVLAGKPSDTLSGSCDTHMADDSST 538

Query: 849  RK-LAEGNGESSFTHIKHFKAMDSGCGGTEE-SEICKSHTSVIGSCSLDSDA-------- 700
            RK LA G               D    G+E  S I  + +S    C+ +++         
Sbjct: 539  RKQLAAGT-----------PVGDQVVQGSERCSPITMTSSSASSLCTKEAEGSAINLVGN 587

Query: 699  ----------ARQRQHVEDNNVKNNSTDGK---CHTASASEGVAGEGSEIGSALPIIAPG 559
                      +R+R+HVED +  +NS D +    H+A   E V   GS I +A   + PG
Sbjct: 588  ANGILNVTVESRKRKHVEDTD--SNSIDAQRLAAHSAKLPESVGMAGSGIIAA---VGPG 642

Query: 558  AATST--SREAEELAIEKIMSAQTINHTGFPEELDELEEYGMTDHERDLGGVMNGRANES 385
              T++  S+EAE LAI+KI S    N    PE LDELE +     ++D  GV  G +  S
Sbjct: 643  NCTASLCSKEAEALAIKKITSGSPTNLASLPEGLDELELFEPQGQDKDFDGVAGGCSVVS 702

Query: 384  LTTKPVQGLSVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMA 205
               K    + VG                     P      ASSSN QRKPLIRL LSS+ 
Sbjct: 703  SAAKDAP-MQVGKLHDSSKNEGIEELEPAELSAPTFGGPTASSSNTQRKPLIRLRLSSVV 761

Query: 204  KTTGTS 187
            K    S
Sbjct: 762  KAADKS 767


>ref|XP_010265872.1| PREDICTED: poly(A) polymerase PAPalpha-like [Nelumbo nucifera]
          Length = 756

 Score =  999 bits (2583), Expect = 0.0
 Identities = 524/766 (68%), Positives = 601/766 (78%), Gaps = 13/766 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS GLN R+NG  +LGVTEPISL GP+EFDVVKT+ELEK L D GLYESQEEAV+REEV
Sbjct: 1    MGSPGLNVRNNG--HLGVTEPISLSGPTEFDVVKTRELEKFLVDAGLYESQEEAVAREEV 58

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK W+K VSRAKGFNEQLV EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 59   LGRLDQIVKKWIKMVSRAKGFNEQLVLEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 118

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF+EL NML EMPEV+ELHPVPDAHVPVM+FKF+GVSIDLLYAKLSLWVIPEDLD
Sbjct: 119  TREEDFFIELHNMLAEMPEVSELHPVPDAHVPVMRFKFNGVSIDLLYAKLSLWVIPEDLD 178

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQD +LQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF
Sbjct: 179  ISQDMVLQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 238

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALPSMLV+RFFRV+TQWRWPNPVMLCAIEEG+LGLP+WDPR
Sbjct: 239  LGGINWALLVARICQLYPNALPSMLVSRFFRVFTQWRWPNPVMLCAIEEGTLGLPVWDPR 298

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +N RDRLHQMPIITPAYPCMNSSYNV SSTLRVMTEEFQRGNEICEAM+ NKADW+TLFE
Sbjct: 299  KNYRDRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRGNEICEAMEKNKADWNTLFE 358

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            P  FFEAYKNYL+I+I+AEN+D LRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS
Sbjct: 359  PCRFFEAYKNYLQIEISAENDDHLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 418

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSR FHCC+FMGL+ KQG    EG+QFDIRATVE+FKHSVG YTLWK GMEI VSHI+R
Sbjct: 419  DKSRLFHCCYFMGLRLKQGVSMQEGKQFDIRATVEDFKHSVGLYTLWKPGMEIYVSHIKR 478

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVGVA-------DETRKRK 844
            RNIPLFVFP GVRPSR AK   ++GKS   PK  +++ A+++  +A       D+ RKRK
Sbjct: 479  RNIPLFVFPDGVRPSRSAKE-AWEGKSASNPKLCNSISAEESCEIATGSMDGTDDIRKRK 537

Query: 843  LAEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNV 664
            L++ NGE++    K   A ++  G    S    S +  I   S+  +A    Q  +++N+
Sbjct: 538  LSDDNGENNPRSTKFLAATNTAYGVLGGS---GSGSPPIVRTSVREEAREGGQ--QEDNL 592

Query: 663  KNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAAT---STSREAEELAIEKIMSAQT 493
            + +S +  C T   ++ +  E  E       + P +A    S ++EAE+LAIEKI S  +
Sbjct: 593  RGSSINATCPTEITTD-IGREAEEPARCSQSVGPPSANSGLSCTKEAEKLAIEKIASGPS 651

Query: 492  I-NHTGFPEELDELE-EYGMTDHERDLGGVMNGRANESLT-TKPVQGLSVGSRDSCXXXX 322
            +  H GFPEELDELE ++  + H +  G  M  +   +   T  V G+   + +      
Sbjct: 652  VGGHGGFPEELDELEDDFNSSYHVKGFGRDMPSKVLVAKAGTVEVNGVHPPT-EFLQHGG 710

Query: 321  XXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMAKTTGTSS 184
                        P    VPAS+S PQRKPLIRL+L+SMAK TG ++
Sbjct: 711  GLEELEPAELTTPFSNLVPASTSIPQRKPLIRLNLTSMAKATGRNT 756


>ref|XP_009387260.1| PREDICTED: poly(A) polymerase PAPalpha isoform X1 [Musa acuminata
            subsp. malaccensis] gi|695079670|ref|XP_009387261.1|
            PREDICTED: poly(A) polymerase PAPalpha isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 773

 Score =  991 bits (2563), Expect = 0.0
 Identities = 528/779 (67%), Positives = 576/779 (73%), Gaps = 26/779 (3%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M S+GL  RSNG  +LGVTEPIS  GP+E+DV+KTQELEK LAD GLYESQEEAVSREE+
Sbjct: 1    MESSGLVKRSNG--HLGVTEPISWSGPTEYDVIKTQELEKYLADAGLYESQEEAVSREEI 58

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVKKVSRAKGFNEQ VQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 59   LGRLDQIVKIWVKKVSRAKGFNEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 118

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL NML EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYAKLSLWVIPEDLD
Sbjct: 119  TREEDFFTELHNMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLD 178

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 179  ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 238

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALPSMLV+RFFRVYTQWRWPNPVMLC I+EG+LGLPIWDPR
Sbjct: 239  LGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIQEGTLGLPIWDPR 298

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RN RDRLHQMPIITPAYPCMNSSYNV SSTLRVMTEEFQRGNEICEAM+ NKADW TLFE
Sbjct: 299  RNFRDRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRGNEICEAMEANKADWDTLFE 358

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYKNYLEIDITA+NE DLRKWKGWVESRLR LTLKIERHTFGML CHP P DFS
Sbjct: 359  PYPFFEAYKNYLEIDITADNESDLRKWKGWVESRLRTLTLKIERHTFGMLHCHPCPRDFS 418

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFHCC+FMGLQRKQG P  E EQFDIR TV++FK+SV  YTLWK GMEIQVSH +R
Sbjct: 419  DKSRPFHCCYFMGLQRKQGVPVQESEQFDIRGTVDDFKNSVSMYTLWKPGMEIQVSHRKR 478

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVG----VADETRKRKLAE 835
            RN+PLFVFPGGVRPSRP K  G DG +V   K SD V A K  G    VAD +  RK  E
Sbjct: 479  RNVPLFVFPGGVRPSRPPKVAGVDGHAVSGRKVSDMVHAGKPAGNVSHVADASTDRKQME 538

Query: 834  GNGES------SFTHIKHFKAMDSGCGGT------------EESEICKSHTSVIGSCSL- 712
            G G S      S +  +  K +D+                 + SE+    +   G   + 
Sbjct: 539  GKGASCDPIVESSSESRKGKQLDNRTDSNAANMNNLVDHILKPSEMGTPSSFANGVLDVP 598

Query: 711  DSDAARQRQHVEDNNVKNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAATSTSREA 532
            D    R+   V  ++    S     H+    E  A   + +G     +  G +   S+EA
Sbjct: 599  DESRKRKCMDVTTDSFATGSEFQADHSFKRPETSAAIAASVGPVTE-VDNGESIFCSKEA 657

Query: 531  EELAIEKIMSAQTINHTGFPEELDELEEYGMTDHERDLGGVMNGRANESLTTKPV---QG 361
            E LAI KI S    N    PE LDELE +    H++  GG + G + ES T K      G
Sbjct: 658  ETLAISKITSVPPSNLAALPEGLDELEYFESQGHDKGFGGPVGGHSVESSTVKDAITQLG 717

Query: 360  LSVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMAKTTGTSS 184
             S GS                          PAS++N QRKPL RL LS++AK+ G  S
Sbjct: 718  SSYGSNTKNGGVEELEKSSELSAPYL--GGAPASTANTQRKPL-RLRLSTVAKSAGERS 773


>ref|XP_010257444.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase PAPalpha-like
            [Nelumbo nucifera]
          Length = 741

 Score =  991 bits (2561), Expect = 0.0
 Identities = 508/698 (72%), Positives = 567/698 (81%), Gaps = 11/698 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS G N R+NG+ +LGVTEPISLGGP+EFDV+KT+ELEK LA+ GLYESQEEAVSREEV
Sbjct: 1    MGSPGSNVRNNGR-HLGVTEPISLGGPTEFDVIKTRELEKFLAEAGLYESQEEAVSREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LG LDQ+VK W+K VSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGAD+DTLCVGPRHA
Sbjct: 60   LGSLDQVVKKWIKAVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADVDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF+EL  ML EMPEVTELHPVPDAHVPVMKFKF+GVSIDLLYAKLSLWVIPEDLD
Sbjct: 120  TREEDFFVELHKMLAEMPEVTELHPVPDAHVPVMKFKFNGVSIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNADEQTVRSLNGCRVTD+ILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 180  ISQDSILQNADEQTVRSLNGCRVTDRILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALPSMLV+RFFRV+ QWRWPNPVMLCAIEEGSLGLP+WDPR
Sbjct: 240  LGGINWALLVARICQLYPNALPSMLVSRFFRVFAQWRWPNPVMLCAIEEGSLGLPVWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +N RDRLHQMPIITPAYPCMNSSYNV SSTLRVM +EFQRGNEICE M+ NKADW+ LFE
Sbjct: 300  KNYRDRLHQMPIITPAYPCMNSSYNVSSSTLRVMXQEFQRGNEICEPMEKNKADWNALFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYKNYL+IDI+AEN+DDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS
Sbjct: 360  PYPFFEAYKNYLQIDISAENDDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFHC +FMGL RKQG   +EG+QFDIRATVEEFK SVG YTLWK  MEI VSHI+R
Sbjct: 420  DKSRPFHCSYFMGLSRKQGVSVHEGKQFDIRATVEEFKLSVGMYTLWKPRMEIHVSHIKR 479

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKN-------VGVADETRKRK 844
            RNIPLFVFPGG+RPSRPAK  G + K V   K  ++VQA K+       +GVAD+ RKRK
Sbjct: 480  RNIPLFVFPGGIRPSRPAKEDG-ESKPVSNLKLCNSVQASKSCESAVGAMGVADDIRKRK 538

Query: 843  LAEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNV 664
            L   N E++    K   ++ +  G    S    S  +        S+   + QH  +NN+
Sbjct: 539  LGYDNDENNPRAAK-LLSVTTTEGSVSRSSPTASTCTTATFYDAPSEVRERGQH--ENNL 595

Query: 663  KNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAATS---TSREAEELAIEKIMSAQT 493
             ++     C T   S G   EGS   S  P++ P +  S    S+EAE+LAIEKI S  +
Sbjct: 596  GDSPISATCLTGVPSHGGEAEGSVRCS--PLVKPSSTNSDLVCSKEAEKLAIEKIASGPS 653

Query: 492  INHTGFPEELDELE-EYGMTDHERDLGGVMNGRANESL 382
            ++  GF EELDELE + G TD  +  G    G ++ESL
Sbjct: 654  VSQQGFLEELDELEDDIGSTDQVKVFGVSRKGISSESL 691


>ref|XP_008775850.1| PREDICTED: poly(A) polymerase PAPalpha [Phoenix dactylifera]
          Length = 767

 Score =  981 bits (2537), Expect = 0.0
 Identities = 529/781 (67%), Positives = 587/781 (75%), Gaps = 28/781 (3%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M S+GL+ RSNG  YLGVTEPIS  GP+EFD+ KTQELEK LAD GLYESQE AVSREEV
Sbjct: 1    MASSGLSKRSNG--YLGVTEPISWSGPTEFDITKTQELEKYLADAGLYESQEGAVSREEV 58

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WV+KVSRAKGFNEQ VQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 59   LGRLDQIVKVWVRKVSRAKGFNEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 118

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL NML EMPEVTELHPVPDAHVPVMKFKF+GVSIDLLYAKLSLWVIPEDLD
Sbjct: 119  TREEDFFTELHNMLAEMPEVTELHPVPDAHVPVMKFKFNGVSIDLLYAKLSLWVIPEDLD 178

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 179  ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 238

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALPSMLV+RFFRVYTQWRWPNPVMLC IEEG+LGL +WDPR
Sbjct: 239  LGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCDIEEGTLGLSVWDPR 298

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +N +DRLHQMPIITPAYP MNSSYNV SSTLRVMT+EFQRG+ ICE M+ NKADWS LFE
Sbjct: 299  KNFKDRLHQMPIITPAYPSMNSSYNVSSSTLRVMTDEFQRGHVICEEMEANKADWSKLFE 358

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYK+YLEIDITA NEDDLRKWKGWVESRLR LTLKIERHTFGMLQCHPHPGDFS
Sbjct: 359  PYPFFEAYKHYLEIDITAANEDDLRKWKGWVESRLRTLTLKIERHTFGMLQCHPHPGDFS 418

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSR FHCC+FMGLQRKQG P NEGEQFDIR TVE+FKHSVG YTLWK GMEIQVSHI+R
Sbjct: 419  DKSRLFHCCYFMGLQRKQGVPVNEGEQFDIRVTVEDFKHSVGMYTLWKPGMEIQVSHIKR 478

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQA----DKNVGVADETRKRKLAE 835
            RN+P FVFP G+RPSRP K    +G +V K K+S +VQA    D   G  D T    +AE
Sbjct: 479  RNVPSFVFPSGIRPSRPPKAAVSEGHTVSKIKSSSSVQAGKPSDTLAGSGDTT--THMAE 536

Query: 834  GNGESSFTHIKHFKAM--DSGCGGTEE-SEICKSHTSVIGSCSLDSDA------------ 700
               +SS T +     +  D    G+E  S I  + +S    C+ +++             
Sbjct: 537  ---DSSTTKLLAAGILIGDQVVEGSERCSPITMTSSSASSLCTKEAEGSAINLVGNANGI 593

Query: 699  ------ARQRQHVEDNNVKNNSTDGK-CHTASASEGVAGEGSEIGSALPIIAPGAATST- 544
                  +R+R+H ED +  +NS D K   +A   E V    S I +A     PG  TS+ 
Sbjct: 594  LNVTIESRKRKHEEDTD--SNSIDAKRLASAKPPESVGMAASGIIAAED---PGNCTSSL 648

Query: 543  -SREAEELAIEKIMSAQTINHTGFPEELDELEEYGMTDHERDLGGVMNGRANESLTTKPV 367
             S+EAE LAI+KI S    N    PE LDELE + +   ++D GGV +G +  S   K  
Sbjct: 649  CSKEAEALAIKKITSGSPTNLASLPEGLDELELFELHGQDKDFGGVASGCSVVSSAAKDA 708

Query: 366  QGLSVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMAKTTGTS 187
              + VG                     P      AS+ N QRKPL +L LSS+ + TG S
Sbjct: 709  P-MQVGKLHDSSKNGGIEELEPAELSAPTFGGPTASTLNAQRKPL-KLRLSSVVRATGKS 766

Query: 186  S 184
            +
Sbjct: 767  A 767


>ref|XP_002279968.2| PREDICTED: nuclear poly(A) polymerase 1 [Vitis vinifera]
          Length = 757

 Score =  971 bits (2510), Expect = 0.0
 Identities = 506/766 (66%), Positives = 574/766 (74%), Gaps = 13/766 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M + GLNNR+N  Q LG+TEPISLGGP+E DV KTQELEK LA  GLYESQEEAVSREEV
Sbjct: 1    MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61   LGRLDQIVKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL  ML EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYAKLSLWVIPEDLD
Sbjct: 121  TREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLD 180

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            +SQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLR MRFWAKRRGVYSNV+GF
Sbjct: 181  VSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGF 240

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALPSMLV+RFFRVYTQWRWPNPVMLCAIEEG+LGL +WDPR
Sbjct: 241  LGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPR 300

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            + P+DR H MPIITPAYPCMNSSYNV SSTLR+M+EEF+RGNEI E M+ NKADW+TL E
Sbjct: 301  KYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCE 360

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYKNYL+I+I AEN DDLRKWKGWVESRLRQLTLKIERHT+ MLQCHPHPGDFS
Sbjct: 361  PYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 420

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFHCC+FMGLQRKQG PA+EGEQFDIR TV+EFKHSVG YTLWK GMEI V H+RR
Sbjct: 421  DKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRR 480

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVGVADETRKRKLAEGNGE 823
            RNIP FVFPGGVRPSRP K    + + VL+P  S     +     A++++KRK  + N E
Sbjct: 481  RNIPNFVFPGGVRPSRPTK-VASERRRVLEPNVSTQAVLEG----AEDSKKRKREDENVE 535

Query: 822  SSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSL--DSDAARQRQHVEDNNVKNNST 649
               T+ ++ K + +    + E        S + +CS+  DS             V+NN  
Sbjct: 536  ---TNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKVDSMDINMLGKTRKEKVENNIE 592

Query: 648  DGKCHTASASEGVAGEGSEIGSA-----LPIIAPGAATSTSREAEELAIEKIMSAQTINH 484
             G  +  ++ E     G   GS      +  ++    + +S EAE++AIEKIMS   ++H
Sbjct: 593  HGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSGGSPSSTEAEKIAIEKIMSGPYVSH 652

Query: 483  TGFPEELDELE-EYGMTDHERDLGGVMNGRANESLTTKPVQGLSVGSRDSCXXXXXXXXX 307
              FP ELDELE +    +  +D  G   G + ES +   V    + +             
Sbjct: 653  QAFPGELDELEDDVEYKNQVKDFTGSTKGSSAES-SKANVAEEPLTTTSGTVPCTILSPN 711

Query: 306  XXXXXXXPCHTRVPAS-----SSNPQRKPLIRLSLSSMAKTTGTSS 184
                   P     P S     SS  Q+KP+IRLS +S+AK TG S+
Sbjct: 712  GGLEELEPAELMPPLSYGNRPSSTEQKKPIIRLSFTSLAKATGKST 757


>ref|XP_007036647.1| Poly(A) polymerase 1 isoform 1 [Theobroma cacao]
            gi|590665102|ref|XP_007036648.1| Poly(A) polymerase 1
            isoform 1 [Theobroma cacao] gi|508773892|gb|EOY21148.1|
            Poly(A) polymerase 1 isoform 1 [Theobroma cacao]
            gi|508773893|gb|EOY21149.1| Poly(A) polymerase 1 isoform
            1 [Theobroma cacao]
          Length = 762

 Score =  968 bits (2502), Expect = 0.0
 Identities = 511/768 (66%), Positives = 576/768 (75%), Gaps = 16/768 (2%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS GL NR+NGQ+ LG+TEPISLGGP+++DV+KT+ELEK L +VGLYESQEEAV REEV
Sbjct: 1    MGSPGLGNRNNGQR-LGITEPISLGGPTDYDVIKTRELEKYLQNVGLYESQEEAVGREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQ VK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 60   LGRLDQTVKNWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL  ML EMPEV+ELHPVPDAHVPVMKFKF GVSIDLLYAKLSLWVIPEDLD
Sbjct: 120  TREEDFFGELYKMLSEMPEVSELHPVPDAHVPVMKFKFKGVSIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQN DEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 180  ISQDSILQNTDEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLCAIEEGSLGL +WDPR
Sbjct: 240  LGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +NP+DR H MPIITPAYPCMNSSYNV SSTLR+MT+EFQRG+EICEAM+ NKADW  LFE
Sbjct: 300  KNPKDRYHLMPIITPAYPCMNSSYNVSSSTLRIMTDEFQRGSEICEAMEANKADWDILFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
             Y FFEAYKNYL+IDI+AEN DDLRKWKGWVESRLRQLTLKIERHT+ MLQCHPHPGDF 
Sbjct: 360  SYAFFEAYKNYLQIDISAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFQ 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFH  +FMGLQRKQG P NEGEQFDIR TVEEFKHSV  YTLWK GMEI+V+H++R
Sbjct: 420  DKSRPFHGSYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNMYTLWKPGMEIRVTHVKR 479

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKN---VGVA---DETRKRKL 841
            RNIP FVFPGGVRPSRP+K   +D   V   K S     DK+    GVA   D+ +KRK 
Sbjct: 480  RNIPSFVFPGGVRPSRPSK-VTWDSMRVSDAKVSGHAGPDKSGEVKGVADGQDDGKKRKR 538

Query: 840  AEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVK 661
             + NG++     K+  A+ S    + E  +  S  S + SCS   D +     +E    K
Sbjct: 539  VDDNGDAQLRSSKYITAVPS---SSLEGRV-GSPVSTVSSCSTKGDYSDATGLIETTREK 594

Query: 660  --NNSTDGKCHTASASEGVAGEGSEIGS--ALPIIAPGAATSTSREAEELAIEKIMSAQT 493
              +N T+G  ++ S  E  +  G   GS    P I   A  S+  EAE LAIEKIMS   
Sbjct: 595  AESNMTNGLINSRSLEELSSHNGEVDGSVGCNPPIKVSADASSCTEAENLAIEKIMSGPY 654

Query: 492  INHTGFPEELDELE-EYGMTDHERDLGGVMNGRANESLT----TKPVQGLS-VGSRDSCX 331
              H  FP+EL+ELE +    +  R +    +G    S++      PV   +  G   S  
Sbjct: 655  GAHQAFPQELEELEDDLEFRNQVRSVENTKSGPVESSMSDLAGAAPVTSSNGAGPSTSLH 714

Query: 330  XXXXXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMAKTTGTS 187
                               R+P S+   QRKPLIRL+ +S+ K +  S
Sbjct: 715  ASGGIEELEPAELTAMISNRIP-SAPVAQRKPLIRLNFTSLGKASEKS 761


>ref|XP_011009627.1| PREDICTED: nuclear poly(A) polymerase 1 [Populus euphratica]
          Length = 776

 Score =  964 bits (2492), Expect = 0.0
 Identities = 508/781 (65%), Positives = 581/781 (74%), Gaps = 28/781 (3%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQY--LGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSRE 2269
            MGS GL NR+NGQQ   LG+TEPISLGGP+E+DV KT+ELEK L D GLYESQEEAVSRE
Sbjct: 1    MGSPGLINRNNGQQQQRLGITEPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSRE 60

Query: 2268 EVLGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR 2089
            EVLGRLDQIVK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR
Sbjct: 61   EVLGRLDQIVKNWVKVISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR 120

Query: 2088 HATREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPED 1909
            HATREEDFF EL  ML EMPEVTELHPVPDAHVPVM+FKF GVSIDLLYAKLSLWVIPED
Sbjct: 121  HATREEDFFGELHRMLSEMPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPED 180

Query: 1908 LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVS 1729
            LD+SQDS+L NADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVS
Sbjct: 181  LDVSQDSMLHNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVS 240

Query: 1728 GFLGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWD 1549
            GFLGGINWALL ARICQL+PNALP+MLV+RFFRVYTQWRWPNPVMLCAIEEGSLGLP+WD
Sbjct: 241  GFLGGINWALLAARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWD 300

Query: 1548 PRRNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTL 1369
            PRRNP+DR H MPIITPAYP MNSSYNV SSTLR+MTEEFQRGNEICEAM+V+KA+W TL
Sbjct: 301  PRRNPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTL 360

Query: 1368 FEPYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGD 1189
            FEP+ FFEAYKNYL+IDI+AENEDDLR+WKGWVESRLRQLTLKIERHT+ MLQCHPHPG+
Sbjct: 361  FEPFSFFEAYKNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGE 420

Query: 1188 FSDKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHI 1009
            FSDKSRP HC +FMGLQRKQG P NEGEQFDIR TV+EFKHSV  YT  K GMEI V+H+
Sbjct: 421  FSDKSRPLHCSYFMGLQRKQGVPVNEGEQFDIRITVDEFKHSVKMYTSRKPGMEIHVTHV 480

Query: 1008 RRRNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVGV-----ADETRKRK 844
            +RRNIP FVFP GVRPSRP+K   +DG+   + K ++   ADK  G      +DE +KRK
Sbjct: 481  KRRNIPNFVFPNGVRPSRPSKA-TWDGRRSSEAKVANNSSADKIEGKGVLDGSDEGKKRK 539

Query: 843  LAEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSD--AARQRQHVEDN 670
              + + E++  + K + AM    G   E          + SCS  SD         ++  
Sbjct: 540  RIDDDTENNLRNPKGYAAMPPSSGEVLEG---SPPVGNVSSCSTQSDLVITNSLGELKGE 596

Query: 669  NVKNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAA------TSTSREAEELAIEKI 508
               NN T+   ++ + + G+  +  E+   L    PG        TS+S+EAE+LAI+KI
Sbjct: 597  KADNNETESLNNSQNLA-GIFAQNGELDGILRCNLPGKGLPANNNTSSSKEAEKLAIDKI 655

Query: 507  MSAQTINHTGFPEELDELE-EYGMTDHERDLGGVMNGRANES--------LTTKPVQGL- 358
            MS   + H   P+ELDELE ++  T+  +       G   ES        LT + +  + 
Sbjct: 656  MSGPYVAHQALPQELDELEDDFVYTNQGKGSEWAAKGSPVESSLSNTAAELTNESIAAVA 715

Query: 357  -SVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNP--QRKPLIRLSLSSMAKTTGTS 187
             S G+  S                         SS+ P  Q KPLIRL+ +S+ K  G S
Sbjct: 716  CSNGAGPSAYLYPNGGSDELEXAELMAPLFNGISSAPPVAQPKPLIRLNFTSLGKAAGKS 775

Query: 186  S 184
            +
Sbjct: 776  T 776


>ref|XP_012486421.1| PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Gossypium
            raimondii] gi|823176367|ref|XP_012486422.1| PREDICTED:
            nuclear poly(A) polymerase 1 isoform X1 [Gossypium
            raimondii] gi|823176370|ref|XP_012486423.1| PREDICTED:
            nuclear poly(A) polymerase 1 isoform X1 [Gossypium
            raimondii] gi|763769978|gb|KJB37193.1| hypothetical
            protein B456_006G193600 [Gossypium raimondii]
            gi|763769981|gb|KJB37196.1| hypothetical protein
            B456_006G193600 [Gossypium raimondii]
          Length = 762

 Score =  956 bits (2470), Expect = 0.0
 Identities = 499/772 (64%), Positives = 571/772 (73%), Gaps = 20/772 (2%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS GL   ++GQ+ LG+TEPISLGGP+E+DV+KT+ELEK L +VGLYESQEEAVSREEV
Sbjct: 1    MGSPGLGTGNSGQR-LGITEPISLGGPTEYDVIKTRELEKYLQNVGLYESQEEAVSREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 60   LGRLDQIVKNWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL  ML EMPEV+ELHPVPDAHVP+MKFKF GVSIDLLYAKLSLWVIPEDLD
Sbjct: 120  TREEDFFGELHKMLSEMPEVSELHPVPDAHVPIMKFKFKGVSIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQN D+QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 180  ISQDSILQNTDDQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLCAI+EGSLGL +WDPR
Sbjct: 240  LGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIKEGSLGLQVWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +NP+DR H MPIITPAYP MNSSYNV SSTLR+MT+EFQRG+EICEAM+ NKADW  LFE
Sbjct: 300  KNPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTDEFQRGSEICEAMEANKADWDALFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
             Y FFEAYKNYL+IDI+AEN+DDLR WKGWVESRLRQLTLKIERHT+ MLQCHPHPGDF 
Sbjct: 360  AYAFFEAYKNYLQIDISAENDDDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFQ 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            D SRPFHC +FMGLQRK G P NEGEQFDIR TVEEFKHSV  YTLWK GMEI+VSH++R
Sbjct: 420  DNSRPFHCSYFMGLQRKLGVPVNEGEQFDIRLTVEEFKHSVNTYTLWKPGMEIRVSHVKR 479

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKN---VGVAD---ETRKRKL 841
            R+IP FVFPGGVRPSRP+K   +D +     K S    +DK     G AD   + +KRK 
Sbjct: 480  RSIPSFVFPGGVRPSRPSKA-TWDSRRASDAKVSGHAGSDKPGEVKGAADGQVDGKKRKR 538

Query: 840  AEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVK 661
            A+ + ++   + K+  A+ S     +      S    +  CSL  D       VE    K
Sbjct: 539  ADDSADTQLKNSKYITAVPSSSAEVQAG----SPGGTVSPCSLKGDNVDATGLVEPTRGK 594

Query: 660  NNSTDGKCHTASASEGVAGEGSEIGSALPIIAP------GAATSTSREAEELAIEKIMSA 499
            + S        S+++ ++   SE+  +L  I P       A  S+S+EAE+LAIE+IMS 
Sbjct: 595  DESNMTNGSKTSSTDELSSLNSEVDGSLRCIPPHTGLHVTADASSSKEAEKLAIEQIMSG 654

Query: 498  QTINHTGFPEELDELEEYGMTDHERDLGGVMNGRANESLTTKPVQGL--------SVGSR 343
              ++H  FPEE +ELE+    D E     V  G  N      PV           S G+ 
Sbjct: 655  PYVSHQAFPEEPEELED----DLEFRNRVVSVGNTNNGPLQAPVSDAAGAAPIISSNGAG 710

Query: 342  DSCXXXXXXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMAKTTGTS 187
             S                    T +P +    Q+KPLIRL+ +S+ K +  S
Sbjct: 711  PSISLHASGSIEELEPAELTAMTSIPVAPV-VQKKPLIRLNFTSLGKASEKS 761


>ref|XP_002322074.2| hypothetical protein POPTR_0015s04100g [Populus trichocarpa]
            gi|550321905|gb|EEF06201.2| hypothetical protein
            POPTR_0015s04100g [Populus trichocarpa]
          Length = 780

 Score =  956 bits (2470), Expect = 0.0
 Identities = 505/788 (64%), Positives = 579/788 (73%), Gaps = 35/788 (4%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQY---LGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSR 2272
            MGS GL NR+NGQQ    LG+TEPISLGGP+E+DV KT+ELEK L D GLYESQEEAVSR
Sbjct: 1    MGSPGLINRNNGQQQQQRLGITEPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSR 60

Query: 2271 EEVLGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGP 2092
            EEVLGRLDQIVK WVK +SRAK  NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGP
Sbjct: 61   EEVLGRLDQIVKNWVKVISRAKRLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGP 120

Query: 2091 RHATREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPE 1912
            RHATREEDFF EL  ML EMPEVTELHPVPDAHVPVM+FKF GVSIDLLYAKLSLWVIPE
Sbjct: 121  RHATREEDFFGELHRMLSEMPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPE 180

Query: 1911 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQ---NFRTTLRCMRFWAKRRGVY 1741
            DLD+SQDS+L NADEQTVRSLNGCRVTDQILRLVPNIQ   NFRTTLRCMRFWAKRRGVY
Sbjct: 181  DLDVSQDSMLHNADEQTVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVY 240

Query: 1740 SNVSGFLGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGL 1561
            SNVSGFLGGINWALLVARICQL+PNALP+MLV+RFFRVYTQWRWPNPVMLCAIEEGSLGL
Sbjct: 241  SNVSGFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGL 300

Query: 1560 PIWDPRRNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKAD 1381
             +WDPRRNP+DR H MPIITPAYP MNSSYNV SSTLR+MTEEFQRGNEICEAM+V+KA+
Sbjct: 301  SVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAE 360

Query: 1380 WSTLFEPYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHP 1201
            W TLFEP+ FFEAYKNYL+IDI+AENEDDLR+WKGWVESRLRQLTLKIERHT+ MLQCHP
Sbjct: 361  WDTLFEPFSFFEAYKNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHP 420

Query: 1200 HPGDFSDKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQ 1021
            HPG+FSDKSRP HC +FMGLQRKQG P NEGEQFDIR TV+EFK+SV  YTLWK GMEI+
Sbjct: 421  HPGEFSDKSRPLHCSYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIR 480

Query: 1020 VSHIRRRNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVGV-----ADET 856
            V+H+++RNIP FVFP GVRPSRP+K   +DG+   + K ++   ADK  G      +DE 
Sbjct: 481  VTHVKKRNIPNFVFPSGVRPSRPSKA-TWDGRRSSEAKVANNSSADKIEGKGVLDGSDEG 539

Query: 855  RKRKLAEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSD--AARQRQH 682
            +KRK  + + E++  + K + AM    G   E          + SCS  SD         
Sbjct: 540  KKRKRIDEDTENNLRNPKGYAAMPPSGGEVHEG---SPPVGNVSSCSTQSDLVITNSLGE 596

Query: 681  VEDNNVKNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAA------TSTSREAEELA 520
            ++     NN T+   ++ + + G+  +  E+   L    P         TS+S+EAE+LA
Sbjct: 597  LKGEKADNNETESLSNSQNLA-GIFAQNGELDGILRCNLPDKGLPANNDTSSSKEAEKLA 655

Query: 519  IEKIMSAQTINHTGFPEELDELE-EYGMTDH-------------ERDLGGVMNGRANESL 382
            I+KIMS   + H   P+ELDELE ++  T+              E  L      + NES+
Sbjct: 656  IDKIMSGPYVAHQALPQELDELEDDFVYTNQGKGSEWAAKGSPVESSLSNTAVEQTNESI 715

Query: 381  TTKPVQGLSVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNP--QRKPLIRLSLSSM 208
                    S G+  S                         SS+ P  Q KPLIRL+ +S+
Sbjct: 716  A---AVACSNGAGPSAYLYPNGGSEELEPAELMAPLFNGISSAPPVAQPKPLIRLNFTSL 772

Query: 207  AKTTGTSS 184
             K  G S+
Sbjct: 773  GKAAGKST 780


>gb|KJB37195.1| hypothetical protein B456_006G193600 [Gossypium raimondii]
          Length = 748

 Score =  950 bits (2456), Expect = 0.0
 Identities = 477/677 (70%), Positives = 541/677 (79%), Gaps = 12/677 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS GL   ++GQ+ LG+TEPISLGGP+E+DV+KT+ELEK L +VGLYESQEEAVSREEV
Sbjct: 1    MGSPGLGTGNSGQR-LGITEPISLGGPTEYDVIKTRELEKYLQNVGLYESQEEAVSREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 60   LGRLDQIVKNWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL  ML EMPEV+ELHPVPDAHVP+MKFKF GVSIDLLYAKLSLWVIPEDLD
Sbjct: 120  TREEDFFGELHKMLSEMPEVSELHPVPDAHVPIMKFKFKGVSIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQN D+QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 180  ISQDSILQNTDDQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLCAI+EGSLGL +WDPR
Sbjct: 240  LGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIKEGSLGLQVWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            +NP+DR H MPIITPAYP MNSSYNV SSTLR+MT+EFQRG+EICEAM+ NKADW  LFE
Sbjct: 300  KNPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTDEFQRGSEICEAMEANKADWDALFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
             Y FFEAYKNYL+IDI+AEN+DDLR WKGWVESRLRQLTLKIERHT+ MLQCHPHPGDF 
Sbjct: 360  AYAFFEAYKNYLQIDISAENDDDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFQ 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            D SRPFHC +FMGLQRK G P NEGEQFDIR TVEEFKHSV  YTLWK GMEI+VSH++R
Sbjct: 420  DNSRPFHCSYFMGLQRKLGVPVNEGEQFDIRLTVEEFKHSVNTYTLWKPGMEIRVSHVKR 479

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKN---VGVAD---ETRKRKL 841
            R+IP FVFPGGVRPSRP+K   +D +     K S    +DK     G AD   + +KRK 
Sbjct: 480  RSIPSFVFPGGVRPSRPSKA-TWDSRRASDAKVSGHAGSDKPGEVKGAADGQVDGKKRKR 538

Query: 840  AEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVK 661
            A+ + ++   + K+  A+ S     +      S    +  CSL  D       VE    K
Sbjct: 539  ADDSADTQLKNSKYITAVPSSSAEVQAG----SPGGTVSPCSLKGDNVDATGLVEPTRGK 594

Query: 660  NNSTDGKCHTASASEGVAGEGSEIGSALPIIAP------GAATSTSREAEELAIEKIMSA 499
            + S        S+++ ++   SE+  +L  I P       A  S+S+EAE+LAIE+IMS 
Sbjct: 595  DESNMTNGSKTSSTDELSSLNSEVDGSLRCIPPHTGLHVTADASSSKEAEKLAIEQIMSG 654

Query: 498  QTINHTGFPEELDELEE 448
              ++H  FPEE +ELE+
Sbjct: 655  PYVSHQAFPEEPEELED 671


>ref|XP_010110105.1| Poly(A) polymerase [Morus notabilis] gi|587938462|gb|EXC25192.1|
            Poly(A) polymerase [Morus notabilis]
          Length = 838

 Score =  943 bits (2438), Expect = 0.0
 Identities = 500/784 (63%), Positives = 571/784 (72%), Gaps = 45/784 (5%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQY-------------------------LGVTEPISLGGPSEFDVVKT 2338
            M + GL+NR+NGQ+                          LG+TEPISLGGP+E+DV+K+
Sbjct: 1    MANHGLSNRNNGQRLGITEPISLGGPTEYDVMKSQELEKRLGITEPISLGGPTEYDVMKS 60

Query: 2337 QELEKCLADVGLYESQEEAVSREEVLGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFT 2158
            QELEK L D GLYESQEEAVSREEVLGRLDQIVK WVK +SRAKG NEQLVQEANAKIFT
Sbjct: 61   QELEKYLQDAGLYESQEEAVSREEVLGRLDQIVKLWVKTISRAKGLNEQLVQEANAKIFT 120

Query: 2157 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMK 1978
            FGSYRLGVHGPGADIDTLCVGPRHATREEDFF EL  ML EMPEVTE+HPVPDAHVPV++
Sbjct: 121  FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLVEMPEVTEVHPVPDAHVPVLR 180

Query: 1977 FKFSGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQ 1798
            FKF+GVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQ
Sbjct: 181  FKFNGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQ 240

Query: 1797 NFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPSMLVARFFRVYTQ 1618
            NFRTTLRCMR WAKRRGVYSNVSGFLGGINWALLVARICQLYPNALP+MLV+RFFRVYTQ
Sbjct: 241  NFRTTLRCMRLWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQ 300

Query: 1617 WRWPNPVMLCAIEEGSLGLPIWDPRRNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMT 1438
            WRWPNPVMLCAIEEGSLGL +WDPRRNP+DR H MPIITPAYPCMNSSYNV +STLR+M+
Sbjct: 301  WRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSSYNVSASTLRIMS 360

Query: 1437 EEFQRGNEICEAMKVNKADWSTLFEPYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRL 1258
            EEFQRG EICEAM+ +KADW TLFEPYPFFEAYKNYL+IDI+AEN+DDLRKWKGWVESRL
Sbjct: 361  EEFQRGREICEAMETDKADWDTLFEPYPFFEAYKNYLQIDISAENDDDLRKWKGWVESRL 420

Query: 1257 RQLTLKIERHTFGMLQCHPHPGDFSDKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVE 1078
            RQLTLKIERHT+  LQCHPHPG+FSDKS+PFHC +FMGLQRKQG PANE   FDIR TVE
Sbjct: 421  RQLTLKIERHTYNKLQCHPHPGEFSDKSKPFHCSYFMGLQRKQGVPANESGHFDIRLTVE 480

Query: 1077 EFKHSVGNYTLWKRGMEIQVSHIRRRNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASD 898
            EFK+SV  Y LWK GM I VSH++R+NIP FVFPG VRP RP K   +D K   + KAS 
Sbjct: 481  EFKNSVNMYMLWKPGMLIHVSHVKRKNIPNFVFPGRVRPGRPVK-ITWDMKRASELKASG 539

Query: 897  TVQADKN------VGVADETRKRKLAEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHT 736
              Q DK+      +  +D+  KRK  + N ESS  ++K   +       T E     S  
Sbjct: 540  LAQPDKSDESKTVLNGSDDGSKRKRVDDNVESSLRNVKPRASF------TGEVLEASSPI 593

Query: 735  SVIGSCSLDSDAARQRQHVEDNNVK--NNSTDG--KCHTASASEGVAGEGSEIGS----- 583
            S + S S+  D+    + VE    K  NN  D   KC  ++      GE +E+ S     
Sbjct: 594  STLSSSSVKFDSMDMNRLVESQREKSDNNFVDSFKKCENSADIPSQNGE-NEVSSRCSPP 652

Query: 582  --ALPIIAPGAATSTSREAEELAIEKIMSAQTINHTGFPEELDELEEYGMTDHERDL-GG 412
              A+P+ A  A  S+S+EAE++AI+ IMS    +H   PEELDELE++   +  +D  G 
Sbjct: 653  TKAVPVAAVDA--SSSKEAEKMAIDNIMSGPYDSHQALPEELDELEDFEYRNQAKDFSGS 710

Query: 411  VMNGRANESLTTKPVQGLSVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNP--QRK 238
             M+ +   S   +P   ++  +                         V   SS P  QRK
Sbjct: 711  TMDSQVETSKGNQPAAPITSNTGTGPSTGSYFNGGLEELEPAELMAPVSNGSSAPVAQRK 770

Query: 237  PLIR 226
            P+IR
Sbjct: 771  PIIR 774


>emb|CDO98397.1| unnamed protein product [Coffea canephora]
          Length = 754

 Score =  941 bits (2432), Expect = 0.0
 Identities = 490/760 (64%), Positives = 572/760 (75%), Gaps = 7/760 (0%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M   G  N+S+GQ+ LG+TEPIS  GP+E+D++KT+ELEK LADVGLYESQEEA+SREEV
Sbjct: 1    MAGPGFGNQSSGQR-LGITEPISWSGPTEYDMIKTRELEKFLADVGLYESQEEAISREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVKTWVK VSRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 60   LGRLDQIVKTWVKNVSRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TR++DFF ELQ ML EMPEV+ELHPVPDAHVPV+KFKFSG+SIDLLYAKLSLWVIPEDLD
Sbjct: 120  TRDDDFFGELQRMLSEMPEVSELHPVPDAHVPVLKFKFSGISIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQ+SILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMR+WAKRRGVYSNV+GF
Sbjct: 180  ISQESILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRYWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLC IE+GSLGLP+WDPR
Sbjct: 240  LGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCEIEDGSLGLPVWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RNP+DR H MPIITPAYPCMNSSYNV SSTLR+MT EFQRGNEICEAM  NK +W  LFE
Sbjct: 300  RNPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTNEFQRGNEICEAMDANKCNWDKLFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
             YPFFEAYKNYL+ID+TA N  DL  WKGWVESRLRQLTLKIERHT  MLQCHPHPGDFS
Sbjct: 360  LYPFFEAYKNYLQIDVTAANAADLMNWKGWVESRLRQLTLKIERHTLNMLQCHPHPGDFS 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPF+CC+FMGLQRKQG  ANEGEQFDIR TVEEFKH+VG Y  WK GMEI V H++R
Sbjct: 420  DKSRPFYCCYFMGLQRKQGVAANEGEQFDIRLTVEEFKHAVGMYNTWKPGMEIHVCHVKR 479

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVGVADETRKRKLAEGNGE 823
            R+IP FVFPGGVRP RP K  G +G+   + K S   +        +   KRK  + +  
Sbjct: 480  RSIPAFVFPGGVRP-RPTKVAG-EGRRPSQTKVSSHTEDSSFPKALNGGSKRKRDDTDTA 537

Query: 822  SSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVKNNSTDG 643
            +S    +     +SG    E        TS +G+ SL++      + VED N+ N   + 
Sbjct: 538  TSLNAKRIAGVGESGELVHEGRPSGCIGTSYLGNASLETPGKIFNEKVED-NMGNGLENP 596

Query: 642  KCHTASASEGVAGEGSEIGSAL---PIIAPGAATSTSREAEELAIEKIMSAQTINHTGFP 472
             C   ++S+     G E+ ++L   P     + + +S+EAE+LAIEK+M+   + H  FP
Sbjct: 597  ICLPQASSQ----NGGELDASLRLDPSTPADSISLSSKEAEKLAIEKMMTGPYVAHQTFP 652

Query: 471  EELDELEEYGMTDHERDL-GGVMNGRANESLTTKPVQGLSVGSRDSCXXXXXXXXXXXXX 295
            +ELDELE+     ++  + GG + G + ES  TK    +S+ +  +              
Sbjct: 653  QELDELEDDPEYKNQGKITGGSVKGSSMESSATKGSLIVSLTTSTAAGSCSSLQSSGKLE 712

Query: 294  XXXPCHTRVPAS---SSNPQRKPLIRLSLSSMAKTTGTSS 184
               P     PAS   S+    KP++R + +S+AK TG S+
Sbjct: 713  ELEPPELLPPASRLNSATSAPKPVLRFNFTSLAKATGEST 752


>ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like isoform X1 [Glycine max]
            gi|571478167|ref|XP_006587485.1| PREDICTED: poly(A)
            polymerase-like isoform X2 [Glycine max]
            gi|734382895|gb|KHN23742.1| Poly(A) polymerase [Glycine
            soja]
          Length = 757

 Score =  940 bits (2430), Expect = 0.0
 Identities = 493/769 (64%), Positives = 567/769 (73%), Gaps = 16/769 (2%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MG  GL+N++NGQQ LG+TEPISL GP+E DV+KT+ELEK L  VGLYESQEEAV REEV
Sbjct: 1    MGIPGLSNQNNGQQRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEV 60

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKGFNEQLV EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61   LGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            +R+EDFF ELQ ML EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYA+L+LWVIP+DLD
Sbjct: 121  SRDEDFFGELQKMLSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLD 180

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQ+SILQN DEQTV SLNGCRVTDQ+LRLVPNIQ FRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 181  ISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGF 240

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGIN ALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLCAIEEGSLGL +WDPR
Sbjct: 241  LGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPR 300

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RNP+DR H MPIITPAYPCMNS+YNV SSTLRVM++EF+RG+EICEAM+ +KADW TLFE
Sbjct: 301  RNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFE 360

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFE+YKNYL+IDITAEN DDLR+WKGWVESRLRQLTLKIERHT+GMLQCHPHPG+FS
Sbjct: 361  PYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFS 420

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            D SRPFH C+FMGLQRKQG P NEGEQFDIR TVEEFKHSV  YTLWK GM I VSH++R
Sbjct: 421  DNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKR 480

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVG------VADETRKRKL 841
            RNIP ++FPGGVRP+ P+K    + K   K +     QA+K  G       AD+ RKRK 
Sbjct: 481  RNIPNYIFPGGVRPTFPSKVTA-ENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKR 539

Query: 840  AEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVK 661
            +E   +    + ++ K+  S    + E     S  S   SCS+  D +      E N++ 
Sbjct: 540  SE---DIMDNNPRNSKSPVSLAPPSREVNEDISPISASSSCSMKFDES------EVNSIG 590

Query: 660  NNSTDGKC-----HTASASEGVAGEGSEIGSALPIIAPGAATSTSREAEELAIEKIMSAQ 496
               ++  C        S   G  G  +      P++A  A TS S+E E+LAIEKIMS  
Sbjct: 591  GQKSEKPCLNSPGEIPSGDSGTNGSVTNNQQVNPVLA-AADTSNSKEEEKLAIEKIMSGP 649

Query: 495  TINHTGFPEELDELE-EYGMTDHERDLGGVMNGRANESLTTKPVQGLSVGSRDSCXXXXX 319
               H  FPEE +ELE +    + ++D GG M     ESL +KP                 
Sbjct: 650  YDAHQAFPEEPEELEDDTQYKNQDKDSGGNMKNNM-ESLLSKPAVAEEPVISKEITCSTH 708

Query: 318  XXXXXXXXXXXPCHTRVPASSSN----PQRKPLIRLSLSSMAKTTGTSS 184
                       P     P  S      P +KPLIRL+ +S+ K    S+
Sbjct: 709  LFSNEILEELEPAELSAPLLSGPPAPLPMKKPLIRLNFTSLGKAADKSA 757


>ref|XP_004512881.1| PREDICTED: nuclear poly(A) polymerase 1 [Cicer arietinum]
          Length = 753

 Score =  936 bits (2419), Expect = 0.0
 Identities = 495/767 (64%), Positives = 574/767 (74%), Gaps = 14/767 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MG  GL+N++NG+Q+LG+TEPISL GP+E DVVK+QELEK L   GLYESQ EAV REEV
Sbjct: 1    MGIPGLSNQNNGKQWLGITEPISLAGPTEEDVVKSQELEKYLQGAGLYESQHEAVGREEV 60

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKGFNEQLV EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61   LGRLDQIVKIWVKTISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL+ ML EM EVTELHPVPDAHVPVMKFKF+G+S+DLLYA+L+LWVIPEDLD
Sbjct: 121  TREEDFFGELRKMLSEMEEVTELHPVPDAHVPVMKFKFNGISVDLLYARLALWVIPEDLD 180

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQ+SILQNADEQTV SLNGCRVTDQ+LRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 181  ISQESILQNADEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 240

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGIN ALLV RICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLCAIEEGSLGL +WDPR
Sbjct: 241  LGGINLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPR 300

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RNP+DR H MPIITPAYPCMNS+YNV  STLR+M+EEF+RG+EICEAM+ +KADW TLFE
Sbjct: 301  RNPKDRYHLMPIITPAYPCMNSTYNVTLSTLRIMSEEFKRGSEICEAMEASKADWDTLFE 360

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYKNYL+IDITAEN DDLR+WKGWVESRLRQLTLKIER+T+GMLQCHP+PG+FS
Sbjct: 361  PYPFFEAYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERYTYGMLQCHPYPGEFS 420

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSR FH C+FMGLQRKQG P NEGEQFDIR TVEEFKHSV  YTLWK GM+I VSH++R
Sbjct: 421  DKSRTFHQCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKR 480

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVG---VADETRKRKLAEG 832
            RNIP F+FPGGVRP  P+K  G + +   K + S   QA+K+ G     +E RKRK +E 
Sbjct: 481  RNIPNFIFPGGVRPLLPSKATG-ENRQSSKSRVSGHSQAEKSQGGKAATNEARKRKRSEE 539

Query: 831  NGESSFTHI-KHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVKNN 655
            N E++ + I K F ++       E  E      SV  SCS+  D +      E N++   
Sbjct: 540  NVENNNSKISKSFVSLSP--PNKEVHEDITPIISVTSSCSMKFDDS------EVNSISAQ 591

Query: 654  STDGKCHTASASEGVAGEGSEIGSAL---PIIAPGAATSTSREAEELAIEKIMSAQTINH 484
             ++  C      E  +G+    GS +    + AP A  S ++E E LAIE+IMS     H
Sbjct: 592  KSEKPC-LKLVGEIPSGDSQAYGSVMGNQQLTAPDA--SNTKEEERLAIEQIMSGPYEVH 648

Query: 483  TGFPEELDELE-EYGMTDHERDLGG-VMNGRANESLTTKPVQGLSVGSRDSCXXXXXXXX 310
                EE DELE + G  +  +D GG V +   + S+    V    V  +++         
Sbjct: 649  QALAEESDELEDDMGYRNQVKDNGGSVKSNNFDISIPKFVVAEEQVIPKETICSTHLFSN 708

Query: 309  XXXXXXXXPCHTR-----VPASSSNPQRKPLIRLSLSSMAKTTGTSS 184
                       T      +PA    PQRKPLIRL+ +S+ K    SS
Sbjct: 709  GGLDELEPAELTAPLLCGIPAPV--PQRKPLIRLNFTSLGKALDKSS 753


>ref|XP_011627554.1| PREDICTED: nuclear poly(A) polymerase 1 [Amborella trichopoda]
            gi|769798422|ref|XP_011627555.1| PREDICTED: nuclear
            poly(A) polymerase 1 [Amborella trichopoda]
          Length = 533

 Score =  934 bits (2415), Expect = 0.0
 Identities = 455/512 (88%), Positives = 476/512 (92%), Gaps = 2/512 (0%)
 Frame = -3

Query: 2397 LGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEVLGRLDQIVKTWVKKV 2218
            LGVTEPISLGGPSEFDV+KTQELEK L   GLYESQEE+VSREEVLGRLDQIVK W+KKV
Sbjct: 8    LGVTEPISLGGPSEFDVLKTQELEKFLEGAGLYESQEESVSREEVLGRLDQIVKVWIKKV 67

Query: 2217 SRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFMELQNMLE 2038
            SRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF EL  ML 
Sbjct: 68   SRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFQELYAMLV 127

Query: 2037 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTV 1858
            EMPEVTELHPVPDAHVPVMKFKF+GVSIDLLYAKLSLW+IPEDLDISQDSILQNADEQTV
Sbjct: 128  EMPEVTELHPVPDAHVPVMKFKFNGVSIDLLYAKLSLWIIPEDLDISQDSILQNADEQTV 187

Query: 1857 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 1678
            RSLNGCRVTDQILRLVPNIQ+FRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQ
Sbjct: 188  RSLNGCRVTDQILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 247

Query: 1677 LYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPRRNPRDRLHQMPIITP 1498
            LYPNALPSMLV+RFFRVYTQWRWPNPVMLCAIEEG+LGLP+WDPR+NPRD+LHQMPIITP
Sbjct: 248  LYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLPVWDPRKNPRDKLHQMPIITP 307

Query: 1497 AYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFEPYPFFEAYKNYLEID 1318
            AYPCMNSSYNV SSTLRVM EEFQRGNEICEAM++NK DWSTLFEPYPFFEAYKNYLEID
Sbjct: 308  AYPCMNSSYNVSSSTLRVMMEEFQRGNEICEAMEINKCDWSTLFEPYPFFEAYKNYLEID 367

Query: 1317 ITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFSDKSRPFHCCFFMGLQ 1138
            +TAENEDDLRKWKGWVESRLRQLTLKIER TF MLQCHPHP DFSDKSR FHCC+FMGLQ
Sbjct: 368  VTAENEDDLRKWKGWVESRLRQLTLKIERDTFRMLQCHPHPNDFSDKSRTFHCCYFMGLQ 427

Query: 1137 RKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRRRNIPLFVFPGGVRPS 958
            RK+G P  EGEQFDIRATVEEFKHSVG YTLWK GM+IQVSHIRRRN+P FVFPGGVRPS
Sbjct: 428  RKKGVPILEGEQFDIRATVEEFKHSVGMYTLWKPGMDIQVSHIRRRNVPHFVFPGGVRPS 487

Query: 957  RPAKGWGFDGKSV-LKPKASDTVQADK-NVGV 868
            RP K  G + K V  K KA D  Q DK +VGV
Sbjct: 488  RPLKTAGGEVKKVGSKRKAPDLAQGDKSSVGV 519


>ref|XP_010036910.1| PREDICTED: poly(A) polymerase type 3 [Eucalyptus grandis]
            gi|702495144|ref|XP_010036911.1| PREDICTED: poly(A)
            polymerase type 3 [Eucalyptus grandis]
            gi|702495149|ref|XP_010036912.1| PREDICTED: poly(A)
            polymerase type 3 [Eucalyptus grandis]
            gi|629082125|gb|KCW48570.1| hypothetical protein
            EUGRSUZ_K02240 [Eucalyptus grandis]
          Length = 732

 Score =  934 bits (2415), Expect = 0.0
 Identities = 499/762 (65%), Positives = 557/762 (73%), Gaps = 12/762 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS  L+NRS GQ+ LG+TEPISL GP+E+DV+KT ELEK L D GLYESQ EAV REEV
Sbjct: 1    MGSPLLSNRSGGQR-LGITEPISLSGPTEYDVIKTCELEKYLQDAGLYESQAEAVRREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 60   LGRLDQIVKIWVKSISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF ELQ ML EM EV+EL PVPDA+VPVM FKF+GVSIDLLYAKLSLWVIPEDLD
Sbjct: 120  TREEDFFGELQRMLSEMSEVSELRPVPDAYVPVMGFKFNGVSIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNAD+QTVRSLNGCRVTDQILRLVPNIQNFR TLRCM+FWAKRRGVYSNV+GF
Sbjct: 180  ISQDSILQNADDQTVRSLNGCRVTDQILRLVPNIQNFRMTLRCMKFWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGG+NWALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLC IEEGSLGL IWDPR
Sbjct: 240  LGGVNWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCNIEEGSLGLQIWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RNP+DR H MPIITPAYPCMNSSYNV +STL++M+EEFQRG+++CEAM+  K +W TLFE
Sbjct: 300  RNPKDRFHLMPIITPAYPCMNSSYNVSASTLQIMSEEFQRGSDVCEAMEAGKVEWDTLFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            P+ FFEAYKNYL+IDI+AEN DDLRKWKGWVESRLRQLTLKIERHT+ MLQCHPHPGDFS
Sbjct: 360  PFGFFEAYKNYLQIDISAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFH CFFMGLQRKQG P NEGEQFDIR TVEEFK +V  YT WK GMEI VSH+RR
Sbjct: 420  DKSRPFHHCFFMGLQRKQGVPVNEGEQFDIRVTVEEFKQAVNLYTSWKPGMEIYVSHVRR 479

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKN---VGVADET---RKRKL 841
            +NIP FVFPGG RP RP+K   +D +   + KA+ + Q DK+    G  DE    RKRK 
Sbjct: 480  KNIPDFVFPGGARPPRPSKA-TWDSRRAAELKAASSSQVDKSSEGQGTPDEKDDGRKRK- 537

Query: 840  AEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNVK 661
             E   ES+   +K   A+ S  G  +ES             +L SDA      +  + V+
Sbjct: 538  REEEVESNLKSVKVLAALPSSTGEAQES-------------ALASDATNGAGDIGHDVVQ 584

Query: 660  NNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAATSTSREAEELAIEKIMSAQTINHT 481
            N+ T           G +  G   GS        A  S SREAE +AIEKI S   + H 
Sbjct: 585  NHIT---------GTGGSAYGKPSGSV-------ADESNSREAENIAIEKITSVPYVGHQ 628

Query: 480  GFPEELDELE-EYGMTDHERDLGGVMNGRANESLTTKPVQGLSVGSRDSCXXXXXXXXXX 304
             F +ELDELE +    D   D           SLT+      SV S +            
Sbjct: 629  DFSQELDELEDDVQQKDKYEDTAKGGKSPPMVSLTSN-ASSTSVTSSNGMSTSVSFYTSG 687

Query: 303  XXXXXXPCHTRVPASSSNP-----QRKPLIRLSLSSMAKTTG 193
                  P     P    NP     QRKPLIRLSL+S+ K TG
Sbjct: 688  DLEELEPAELMAPPPIVNPPAPPTQRKPLIRLSLTSLGKATG 729


>ref|XP_004137491.1| PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Cucumis sativus]
            gi|700209059|gb|KGN64155.1| hypothetical protein
            Csa_1G042640 [Cucumis sativus]
          Length = 748

 Score =  934 bits (2415), Expect = 0.0
 Identities = 486/767 (63%), Positives = 568/767 (74%), Gaps = 15/767 (1%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            MGS  L  R+NGQQ LG+T+PISL GP+E+DV+KT+ELEK L D GLYESQE+AV+REEV
Sbjct: 1    MGSPALCGRNNGQQRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEV 60

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SRAKG NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 61   LGRLDQIVKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 120

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF EL  ML EMPEV+ELHPVPDAHVPVM+FK SGVSIDLLYAKLSLWVIPEDLD
Sbjct: 121  TREEDFFGELHKMLSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLD 180

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQN DEQTVRSLNGCRVTD+ILRLVPNIQ+FRTTLRCMRFWAKRRGVYSNVSGF
Sbjct: 181  ISQDSILQNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGF 240

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALP+MLV+RFFRV+TQWRWPNPVMLCA EEGSLGL +WDPR
Sbjct: 241  LGGINWALLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPR 300

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RNP+DR H MPIITPAYPCMNSSYNV +STLR+MTEEF+RG++ICE M+ NK+DW TLFE
Sbjct: 301  RNPKDRYHLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFE 360

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYKNYL+IDITAEN+DD+R WKGWVESRLRQLTLKIERHT+ MLQCHP+PGDFS
Sbjct: 361  PYPFFEAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFS 420

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFH C+FMGLQRKQG PA+ GEQFDIR TV+EFKHSV  YT  KRGMEI VSH++R
Sbjct: 421  DKSRPFHHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKR 480

Query: 1002 RNIPLFVFPGGVRPSRPAK-GWGFDGKSVLKPKASDTVQADKNVGVA-----DETRKRKL 841
            R+IP FVFPGGVRPSR +K  W     S LK  ASD+ Q D           D+ RKR  
Sbjct: 481  RSIPNFVFPGGVRPSRASKLTWDIRRSSELK--ASDSTQVDSPSEATESLDGDDRRKRIR 538

Query: 840  AEGNGESSFTHIKHFKAMDSGCGGTEE----SEICKSHTSVIGSCSLDSDAARQRQHVED 673
             + N     T++++ + +       EE    S++  + +  I   +    +A   +++ D
Sbjct: 539  IDDNAN---TNLRNGECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNLENLAD 595

Query: 672  NNVKNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAATSTSREAEELAIEKIMSAQT 493
             + +NN   G    + ++  V+   ++             TS  +EAE+LAI+KI+S   
Sbjct: 596  VSSQNNGDHGSLRVSPSTNNVSDAAAD-------------TSNCKEAEKLAIQKILSDSY 642

Query: 492  INHTGFPEELDELEEYGMTDHERDLGGVMNGRANES--LTTKPVQGLSVGSRDSCXXXXX 319
             +H  FP E +ELE++   +  +D G    G    S    T P+  L   S +       
Sbjct: 643  DSHQDFPCETEELEDFDYNNQAKDFGATKQGSPMMSSVANTSPLV-LPTVSCNEARQSSS 701

Query: 318  XXXXXXXXXXXPCHTRVPASSSNP---QRKPLIRLSLSSMAKTTGTS 187
                       P     P S+      +RKP+IRLS +S+ K   +S
Sbjct: 702  SYYNGGLEELEPAEIVAPLSTGTAPVAERKPIIRLSFTSLGKAGKSS 748


>ref|XP_007210342.1| hypothetical protein PRUPE_ppa001856mg [Prunus persica]
            gi|462406077|gb|EMJ11541.1| hypothetical protein
            PRUPE_ppa001856mg [Prunus persica]
          Length = 755

 Score =  934 bits (2414), Expect = 0.0
 Identities = 499/770 (64%), Positives = 569/770 (73%), Gaps = 17/770 (2%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M S GL+NR+NG++ LG+TEPISLGGP+E+DV+KT+ELEK L D  LYESQEEAVSREEV
Sbjct: 1    MASPGLSNRNNGKR-LGITEPISLGGPTEYDVIKTRELEKYLQDARLYESQEEAVSREEV 59

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVK +SR KG NEQLV EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
Sbjct: 60   LGRLDQIVKIWVKTISRTKGLNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 119

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
            TREEDFF ELQ ML EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD
Sbjct: 120  TREEDFFGELQRMLSEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 179

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNADEQTVRSLNGCRVTDQILRLVP+IQNFRTTLRCMR WAKRRGVYSNV+GF
Sbjct: 180  ISQDSILQNADEQTVRSLNGCRVTDQILRLVPSIQNFRTTLRCMRLWAKRRGVYSNVAGF 239

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALP+MLV+RFFRVYTQWRWPNPVMLCAIEEGSLGL +WDPR
Sbjct: 240  LGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPR 299

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RNP+D+ H MPIITPAYP MNSSYNV SSTLR+M EEFQRGNEICEAM+ NKADW TLFE
Sbjct: 300  RNPKDKYHLMPIITPAYPSMNSSYNVSSSTLRIMLEEFQRGNEICEAMEANKADWDTLFE 359

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
             Y FFEAYKNYL+IDI+AEN DD RKWKGWVESRLRQLTLKIERHT+GMLQCHPHPGDFS
Sbjct: 360  SYDFFEAYKNYLQIDISAENADDFRKWKGWVESRLRQLTLKIERHTYGMLQCHPHPGDFS 419

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFH  +FMGLQRKQG P  EGEQFDIRATVEEFK SV  YTL +RGMEI+VSH++R
Sbjct: 420  DKSRPFHSSYFMGLQRKQGVPVTEGEQFDIRATVEEFKQSVNLYTLLERGMEIRVSHVKR 479

Query: 1002 RNIPLFVFPGGVRPSRPAK-GWGFDGKSVLKPKASDTVQADK------NVGVADETRKRK 844
            RNIP FVFPG VRP R +K  WG    S L  K S   Q DK      ++  +D  +KRK
Sbjct: 480  RNIPNFVFPGEVRPLRLSKVTWGSRRGSEL--KVSGDSQPDKLCEGKTDLDGSDGGQKRK 537

Query: 843  LAEGNGESSFTHIKHFKAMDSGCGGTEESEICKSHTSVIGSCSLDSDAARQRQHVEDNNV 664
              + N E   T+ ++ K++    G   E        S I SCS   ++    + V+D+  
Sbjct: 538  RVDDNVE---TNSRYAKSLHLSSG---EVHAASPPISNISSCSTKCESMDANKKVDDSIA 591

Query: 663  KNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAATSTSREAEELAIEKIMSAQTINH 484
             +              G     S        +   A TS+S+EAE++A+ K M+   ++H
Sbjct: 592  DSLEKIENPADIPYQNGQIEVSSRCKPPNDSLPAAANTSSSKEAEKMALGKNMAGPYVSH 651

Query: 483  TGFPEELDELEE-----YGMTDHERDLGGVMNGRANESLTTKPVQGLSVGSRDSCXXXXX 319
               P ELDELE+     + + D  R++       + ES++       S G+  S      
Sbjct: 652  QALP-ELDELEDDSEHGHQVKDFSRNMKSSQMEPSEESVSVSAPVNSSNGAGPS-----T 705

Query: 318  XXXXXXXXXXXPCHTRVPASSSNP-----QRKPLIRLSLSSMAKTTGTSS 184
                       P    VP+S+  P     Q+K +IRL+ +S+AK +G SS
Sbjct: 706  DSYNGGLEELEPAELMVPSSNGTPPEPVAQKKSIIRLNFTSLAKASGKSS 755


>ref|XP_009387262.1| PREDICTED: poly(A) polymerase PAPalpha isoform X2 [Musa acuminata
            subsp. malaccensis]
          Length = 752

 Score =  934 bits (2413), Expect = 0.0
 Identities = 507/779 (65%), Positives = 555/779 (71%), Gaps = 26/779 (3%)
 Frame = -3

Query: 2442 MGSAGLNNRSNGQQYLGVTEPISLGGPSEFDVVKTQELEKCLADVGLYESQEEAVSREEV 2263
            M S+GL  RSNG  +LGVTEPIS  GP+E+DV+KTQELEK LAD GLYESQEEAVSREE+
Sbjct: 1    MESSGLVKRSNG--HLGVTEPISWSGPTEYDVIKTQELEKYLADAGLYESQEEAVSREEI 58

Query: 2262 LGRLDQIVKTWVKKVSRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 2083
            LGRLDQIVK WVKKVSRAKGFNEQ VQEANAKIFTFGSYRLG                  
Sbjct: 59   LGRLDQIVKIWVKKVSRAKGFNEQFVQEANAKIFTFGSYRLG------------------ 100

Query: 2082 TREEDFFMELQNMLEEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD 1903
               EDFF EL NML EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYAKLSLWVIPEDLD
Sbjct: 101  ---EDFFTELHNMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLD 157

Query: 1902 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF 1723
            ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNV+GF
Sbjct: 158  ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF 217

Query: 1722 LGGINWALLVARICQLYPNALPSMLVARFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPR 1543
            LGGINWALLVARICQLYPNALPSMLV+RFFRVYTQWRWPNPVMLC I+EG+LGLPIWDPR
Sbjct: 218  LGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIQEGTLGLPIWDPR 277

Query: 1542 RNPRDRLHQMPIITPAYPCMNSSYNVLSSTLRVMTEEFQRGNEICEAMKVNKADWSTLFE 1363
            RN RDRLHQMPIITPAYPCMNSSYNV SSTLRVMTEEFQRGNEICEAM+ NKADW TLFE
Sbjct: 278  RNFRDRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRGNEICEAMEANKADWDTLFE 337

Query: 1362 PYPFFEAYKNYLEIDITAENEDDLRKWKGWVESRLRQLTLKIERHTFGMLQCHPHPGDFS 1183
            PYPFFEAYKNYLEIDITA+NE DLRKWKGWVESRLR LTLKIERHTFGML CHP P DFS
Sbjct: 338  PYPFFEAYKNYLEIDITADNESDLRKWKGWVESRLRTLTLKIERHTFGMLHCHPCPRDFS 397

Query: 1182 DKSRPFHCCFFMGLQRKQGKPANEGEQFDIRATVEEFKHSVGNYTLWKRGMEIQVSHIRR 1003
            DKSRPFHCC+FMGLQRKQG P  E EQFDIR TV++FK+SV  YTLWK GMEIQVSH +R
Sbjct: 398  DKSRPFHCCYFMGLQRKQGVPVQESEQFDIRGTVDDFKNSVSMYTLWKPGMEIQVSHRKR 457

Query: 1002 RNIPLFVFPGGVRPSRPAKGWGFDGKSVLKPKASDTVQADKNVG----VADETRKRKLAE 835
            RN+PLFVFPGGVRPSRP K  G DG +V   K SD V A K  G    VAD +  RK  E
Sbjct: 458  RNVPLFVFPGGVRPSRPPKVAGVDGHAVSGRKVSDMVHAGKPAGNVSHVADASTDRKQME 517

Query: 834  GNGES------SFTHIKHFKAMDSGCGGT------------EESEICKSHTSVIGSCSL- 712
            G G S      S +  +  K +D+                 + SE+    +   G   + 
Sbjct: 518  GKGASCDPIVESSSESRKGKQLDNRTDSNAANMNNLVDHILKPSEMGTPSSFANGVLDVP 577

Query: 711  DSDAARQRQHVEDNNVKNNSTDGKCHTASASEGVAGEGSEIGSALPIIAPGAATSTSREA 532
            D    R+   V  ++    S     H+    E  A   + +G     +  G +   S+EA
Sbjct: 578  DESRKRKCMDVTTDSFATGSEFQADHSFKRPETSAAIAASVGPVTE-VDNGESIFCSKEA 636

Query: 531  EELAIEKIMSAQTINHTGFPEELDELEEYGMTDHERDLGGVMNGRANESLTTKPV---QG 361
            E LAI KI S    N    PE LDELE +    H++  GG + G + ES T K      G
Sbjct: 637  ETLAISKITSVPPSNLAALPEGLDELEYFESQGHDKGFGGPVGGHSVESSTVKDAITQLG 696

Query: 360  LSVGSRDSCXXXXXXXXXXXXXXXXPCHTRVPASSSNPQRKPLIRLSLSSMAKTTGTSS 184
             S GS                          PAS++N QRKPL RL LS++AK+ G  S
Sbjct: 697  SSYGSNTKNGGVEELEKSSELSAPYL--GGAPASTANTQRKPL-RLRLSTVAKSAGERS 752