BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00003177
         (2814 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1206   0.0  
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1199   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]             1188   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1188   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1187   0.0  
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1186   0.0  
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1170   0.0  
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1170   0.0  
ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1166   0.0  
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1166   0.0  
ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1164   0.0  
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1163   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...  1163   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1162   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...  1162   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...  1159   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...  1159   0.0  
emb|CDP00493.1| unnamed protein product [Coffea canephora]           1157   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1154   0.0  
ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1152   0.0  

>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1206 bits (3120), Expect = 0.0
 Identities = 583/660 (88%), Positives = 619/660 (93%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+AQAKVGSRLIE+L+ TAYIQPPVDQLADGPPDIRPAFRH LKTVTKE +KT
Sbjct: 372  DDSKPWGQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKT 431

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVIECDPLVRKGL+RTARHMVIPYMPMLVPP+NWTGYDKGAYLFLPSYVMRTHGAR
Sbjct: 432  SRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGAR 491

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREAVKRAPR+QL+PVFEALDTLGN  WRVNKR+L VVDRIWASGGRLADLVDRED+ +
Sbjct: 492  QQREAVKRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPI 551

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PE+PDTEDEAE++KWKW+++  KKENSERHSQRCDIELKLAVAR+MKDEDGFFYPHNLDF
Sbjct: 552  PEEPDTEDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDF 611

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGL+WLKI LANLYAGGVDKLSY+GRI
Sbjct: 612  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRI 671

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL+DIFDSADRPLEGRRWWL AEDPFQCLA CINLSEALR SSPETTISH+PVH 
Sbjct: 672  AFTENHLDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQ 731

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYS IAARVLDIM+RDA+KDP + P A
Sbjct: 732  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNA 791

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
              AR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD ELF ASCYAAK
Sbjct: 792  MHARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAK 851

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMF+AARSIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 852  TTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 911

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+ AGLNFAGVHDSYWTHAC
Sbjct: 912  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHAC 971

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            D+DEMN+ILREKFVELYE  ILENLLESFQ+           ERGDFDL++VL+SPYFFN
Sbjct: 972  DIDEMNKILREKFVELYEKPILENLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score = 1199 bits (3102), Expect = 0.0
 Identities = 578/660 (87%), Positives = 622/660 (94%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+AQAKVGSRLIE+L++TAYIQPPV Q ADGPPDIRPAFRH L+TVTKEQ+K 
Sbjct: 379  DDSKPWGQDAQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKH 438

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVIECDPLVR+GLDRTARHMVIPYMPMLVPP+NWTGY+KG +LFLPSY+MRTHGAR
Sbjct: 439  SRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGAR 498

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREAV+RAPR+++Q VFEALDTLG+  WRVNKR+L VVDRIW+SGGRLADLVDR+DI L
Sbjct: 499  QQREAVRRAPRKEMQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPL 558

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKPDTED AE+RKWKW+++ VKKENSE+HSQRCD+ELKLAVARKMKDE+GF+YPHNLDF
Sbjct: 559  PEKPDTEDGAEIRKWKWKVKSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 618

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSYDGR+
Sbjct: 619  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRV 678

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL+DIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALR SSPETTISH+PVH 
Sbjct: 679  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQ 738

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYSEIAARVL+IM+RDAQKDPA+DP A
Sbjct: 739  DGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPATDPDA 798

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLL+NQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD ELF+ASCYAAK
Sbjct: 799  LRARLLVNQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFSASCYAAK 858

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYR LGRHLIKTSL
Sbjct: 859  TTLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRALGRHLIKTSL 918

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHAC
Sbjct: 919  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHAC 978

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD+MN ILREKFVELYET ILENLLESFQ+           ERGD+ LKDVL+SPYFFN
Sbjct: 979  DVDQMNWILREKFVELYETPILENLLESFQQSFPTLSFPPLPERGDYSLKDVLDSPYFFN 1038


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score = 1188 bits (3074), Expect = 0.0
 Identities = 577/660 (87%), Positives = 612/660 (92%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+A  KVGSRLIE+LI+TAYIQPP DQL DGPPDIRPAF H LKTV KE +K 
Sbjct: 151  DDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKG 210

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            +RRYGVIECDPLVRKGL++TARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMR HGAR
Sbjct: 211  TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGAR 270

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREA+KRAPR+ L+P FEAL+TLGN  WR+NKR+LGV+DRIWASGGRLADLVDRED+ L
Sbjct: 271  QQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPL 330

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PE+PDTEDEAE+RKWKW++R VKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF
Sbjct: 331  PEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 390

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKI LAN+YAGGVDKLSY+GR+
Sbjct: 391  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRV 450

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHLEDIFDSADRPLEGRRWWL AEDPFQCLA CINLSEALR SSPETTISH+PVH 
Sbjct: 451  AFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQ 510

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYS IAARVLDIMQRDAQKDPA++P A
Sbjct: 511  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNA 570

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I D+ E+F+ASCYAAK
Sbjct: 571  LRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAK 630

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMF+AARSIMSWLGDCAKVIASEN PVRW TPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 631  TTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSL 690

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVL+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+ AGLNFAGVHDSYWTHAC
Sbjct: 691  QVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHAC 750

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVDEMNRILREKFVELY   ILENLLE FQK           ERGDFDL++VLESPYFFN
Sbjct: 751  DVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1188 bits (3074), Expect = 0.0
 Identities = 577/660 (87%), Positives = 612/660 (92%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+A  KVGSRLIE+LI+TAYIQPP DQL DGPPDIRPAF H LKTV KE +K 
Sbjct: 319  DDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKG 378

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            +RRYGVIECDPLVRKGL++TARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMR HGAR
Sbjct: 379  TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGAR 438

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREA+KRAPR+ L+P FEAL+TLGN  WR+NKR+LGV+DRIWASGGRLADLVDRED+ L
Sbjct: 439  QQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPL 498

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PE+PDTEDEAE+RKWKW++R VKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF
Sbjct: 499  PEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 558

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKI LAN+YAGGVDKLSY+GR+
Sbjct: 559  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRV 618

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHLEDIFDSADRPLEGRRWWL AEDPFQCLA CINLSEALR SSPETTISH+PVH 
Sbjct: 619  AFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQ 678

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYS IAARVLDIMQRDAQKDPA++P A
Sbjct: 679  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNA 738

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I D+ E+F+ASCYAAK
Sbjct: 739  LRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAK 798

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMF+AARSIMSWLGDCAKVIASEN PVRW TPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 799  TTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSL 858

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVL+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+ AGLNFAGVHDSYWTHAC
Sbjct: 859  QVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHAC 918

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVDEMNRILREKFVELY   ILENLLE FQK           ERGDFDL++VLESPYFFN
Sbjct: 919  DVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1187 bits (3071), Expect = 0.0
 Identities = 572/662 (86%), Positives = 614/662 (92%)
 Frame = -2

Query: 2810 SSDLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQR 2631
            S D SKPWGQ+AQAKVGS LIE+L+ TAYIQ P DQLADGPPDIRPAFRH LKT+TKE +
Sbjct: 329  SQDDSKPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQ 388

Query: 2630 KTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHG 2451
            KTSRRYG+IECDPLVRKGL+RTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHG
Sbjct: 389  KTSRRYGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHG 448

Query: 2450 ARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDI 2271
            ARQQREAVKR  R+QL+P+FEALDTLGN  WR+NKR+LGVVDRIWASGGRLADLVDRED+
Sbjct: 449  ARQQREAVKRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDV 508

Query: 2270 VLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 2091
             LPE+P+TEDEAEL+KWKW+++ VKKENSERHSQRCD ELKLAVAR+MKDE+GFFYPHNL
Sbjct: 509  PLPEEPETEDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNL 568

Query: 2090 DFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDG 1911
            DFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSY+G
Sbjct: 569  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEG 628

Query: 1910 RIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPV 1731
            RIAFTENHL+DIFDSADRPLEGRRWWL A+DPFQCLAVCINLSEALR  SPET ISH+P+
Sbjct: 629  RIAFTENHLDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPI 688

Query: 1730 HMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDP 1551
            H DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS +AARVLDIM+RDAQKDP ++P
Sbjct: 689  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEP 748

Query: 1550 VAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYA 1371
             A  ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I D+ ELF ASCYA
Sbjct: 749  NAMHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYA 808

Query: 1370 AKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 1191
            AKTT+TALGEMF+AARSIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKT
Sbjct: 809  AKTTITALGEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 868

Query: 1190 SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTH 1011
            SLQVLTLQRETDKVMVKRQRTAFPPNF+HSLDGSHMMMTAVACK AGLNFAGVHDS+WTH
Sbjct: 869  SLQVLTLQRETDKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTH 928

Query: 1010 ACDVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYF 831
            ACDVDEMN+ILREKFVELYET I+ENLLESFQ+           E GDFDL +VL SPYF
Sbjct: 929  ACDVDEMNKILREKFVELYETPIMENLLESFQQSFPALSFPPLPECGDFDLHEVLVSPYF 988

Query: 830  FN 825
            FN
Sbjct: 989  FN 990


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 1186 bits (3069), Expect = 0.0
 Identities = 573/660 (86%), Positives = 614/660 (93%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+ QAKVGSRLIE+L++TAYIQPPV Q ADGPPDIRPAFRH L+TVTKEQ+K 
Sbjct: 379  DDSKPWGQDFQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKH 438

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVIECDPLVR+GLDRTARHMVIPYMPMLVPP++WTGYDKG +LFLPSY+MR HGAR
Sbjct: 439  SRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGAR 498

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREAVKRAPR Q+Q VFEALDTLG   WR+NKR+L VVDR+W+ GGRLADLVDR+DI L
Sbjct: 499  QQREAVKRAPRMQMQAVFEALDTLGTTKWRINKRVLSVVDRMWSGGGRLADLVDRDDIPL 558

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKPDTEDEA +RKWKW+++ VKKENSERHSQRCD+ELKLAVARKMKDE+GF+YPHNLDF
Sbjct: 559  PEKPDTEDEATIRKWKWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 618

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSYDGR+
Sbjct: 619  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRV 678

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL++IFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALR SSPETTISH+PVH 
Sbjct: 679  AFTENHLDEIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQ 738

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYSEIAARVL+IM+RDAQKDPA DP A
Sbjct: 739  DGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPAIDPNA 798

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLL+NQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD ELF ASCYAAK
Sbjct: 799  LRARLLVNQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFGASCYAAK 858

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIM WLGDCAK+IASEN PVRWTTPLGLPVVQPYR LGRHLIKTSL
Sbjct: 859  TTLTALGEMFQAARSIMGWLGDCAKIIASENHPVRWTTPLGLPVVQPYRALGRHLIKTSL 918

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHAC
Sbjct: 919  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKIAGLNFAGVHDSYWTHAC 978

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD++NRILREKFVELYET ILE+LLESFQ            ERGDF+LKDVL+SPYFFN
Sbjct: 979  DVDQLNRILREKFVELYETPILEDLLESFQHSFPTLRFPPLPERGDFNLKDVLDSPYFFN 1038


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score = 1170 bits (3028), Expect = 0.0
 Identities = 565/660 (85%), Positives = 614/660 (93%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+++AKVGSRLIE+L++TAYIQPPV+QLAD PPDIRPAFRH L+ V  EQ+K 
Sbjct: 377  DDSKPWGQDSRAKVGSRLIELLVETAYIQPPVNQLADSPPDIRPAFRHLLRNVQNEQKKI 436

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYG IECDPLVR+GLDRTARHMVIPYMPMLVPP++W GYDKGA+LFLPSY+MRTHG+R
Sbjct: 437  SRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWKGYDKGAHLFLPSYLMRTHGSR 496

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREAVKRAPR+QLQ VFEALDTLGN  WRVNKR+L +VDR+W+SGGRLA+LVDR+DI L
Sbjct: 497  QQREAVKRAPRKQLQLVFEALDTLGNTKWRVNKRVLSIVDRMWSSGGRLANLVDRDDIPL 556

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKP+TED AE+RKWKW+L+ VKKENSERHSQRCD+E+KLAVARKMKDE+GF+YPHNLDF
Sbjct: 557  PEKPETEDGAEIRKWKWKLKSVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDF 616

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSYDGRI
Sbjct: 617  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 676

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL+DIFDSADRPLEGRRWWLGAEDPFQCLAVCINL+EALR SSPE+TISH+PVH 
Sbjct: 677  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQ 736

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYS IAARV +IMQ+DA+KDPA++P A
Sbjct: 737  DGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAEKDPATEPNA 796

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
              ARLLI+QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD ELF ASCYAAK
Sbjct: 797  LHARLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLELFRASCYAAK 856

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIMSWLGDCAKVIASEN  VRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 857  TTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQPYRKLGRHIIKTSL 916

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVL+LQRETDK+MVKRQRTAFPPNFVHSLDGSHMMM+AVACK AGLNFAGVHDSYWTHAC
Sbjct: 917  QVLSLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMSAVACKRAGLNFAGVHDSYWTHAC 976

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVDEMNRILREKFVELYE  ILENLLESFQ+           ERGDFDLKDVLES YFFN
Sbjct: 977  DVDEMNRILREKFVELYEIPILENLLESFQQSFPSLSFRPLPERGDFDLKDVLESTYFFN 1036


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score = 1170 bits (3026), Expect = 0.0
 Identities = 566/660 (85%), Positives = 608/660 (92%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+ QAKVGSRLIE+L++TAYIQPP++QLAD PPDIRPAFRHYL+ V KEQ+K 
Sbjct: 377  DDSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKI 436

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYG IECDPLVR+GLDRTARHMVIPYMPMLVPP++W  YDKGA+LFLPSYVMRTHG+R
Sbjct: 437  SRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSR 496

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQR AVKRAPREQ+Q VFEALDTLGN  WRVNKR+L +VDRIW+SGGRLA+LVDR+D  L
Sbjct: 497  QQRAAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPL 556

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKP+TED AE+RKWKW+L+ VKKENSERHSQRCD+E+KLAVARKMKDE+GF+YPHNLDF
Sbjct: 557  PEKPETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDF 616

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGL WLKI LANLYAGGVDKLSYDGRI
Sbjct: 617  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRI 676

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL+DIFDSADRPLEGRRWWLGAEDPFQCLAVCINL+EALR SSPE+TISH+PVH 
Sbjct: 677  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQ 736

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYS IAARV +IMQ+DAQKDPA DP A
Sbjct: 737  DGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNA 796

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
              ARLLINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD E F ASCYAAK
Sbjct: 797  SHARLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAK 856

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIM WLGDCAKVIASENQ VRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 857  TTLTALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSL 916

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVL+LQRETDK+MVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHAC
Sbjct: 917  QVLSLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHAC 976

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVDEMNRILR+KFVELYE  ILENL ESFQ+           ERGDFDLKDVLES YFFN
Sbjct: 977  DVDEMNRILRDKFVELYEIPILENLRESFQQSFPSLGFPPLPERGDFDLKDVLESTYFFN 1036


>ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
            [Gossypium raimondii] gi|763783438|gb|KJB50509.1|
            hypothetical protein B456_008G174700 [Gossypium
            raimondii]
          Length = 996

 Score = 1166 bits (3016), Expect = 0.0
 Identities = 559/660 (84%), Positives = 605/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQEA  KVG RLI++L++ AYIQPPVDQ+ DGPPDIRPAF H LK V K+  K 
Sbjct: 337  DTSKPWGQEAHVKVGCRLIQLLMENAYIQPPVDQIGDGPPDIRPAFVHALKNVIKDGNKG 396

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVIECDPLVRKGL++TA+HMVIPYMPMLVPP NWTGYD+GAYLFLPSYVMRTHGA+
Sbjct: 397  SRRYGVIECDPLVRKGLEKTAKHMVIPYMPMLVPPQNWTGYDQGAYLFLPSYVMRTHGAK 456

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQRE VKR PR+QL+PVFEALDTLGN  WR+N+RILGVVDR+WA+GGRLADLVDRED+ L
Sbjct: 457  QQRETVKRTPRKQLEPVFEALDTLGNTKWRINRRILGVVDRLWANGGRLADLVDREDVPL 516

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PE+PDTEDE E+RKWKW+++ VKKEN+ERHSQRCD+ELKLAVARKMKDE GF+YPHNLDF
Sbjct: 517  PEEPDTEDETEIRKWKWKVKAVKKENNERHSQRCDVELKLAVARKMKDEVGFYYPHNLDF 576

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSY+GR+
Sbjct: 577  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRV 636

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
             FTE+HL+DIFDSADRPLEG+RWWL AEDPFQCLA CINLSEALR S PE TISH+PVH 
Sbjct: 637  EFTESHLDDIFDSADRPLEGKRWWLSAEDPFQCLAACINLSEALRSSIPEATISHMPVHQ 696

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IAARVLDIM+RDAQ+DPA++P A
Sbjct: 697  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAQEDPATNPNA 756

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
              ARLLINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG I DD +LF ASCYAA+
Sbjct: 757  LHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGAIADDTQLFVASCYAAR 816

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIM WLG+CAKVIASENQPVRW TPLGLPVVQPYR+LGRHLIKTSL
Sbjct: 817  TTLTALGEMFQAARSIMGWLGECAKVIASENQPVRWVTPLGLPVVQPYRQLGRHLIKTSL 876

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHAC
Sbjct: 877  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHAC 936

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVDEMNRILREKFVELYE  ILENLLESFQK           ERGDFDL++VLESPYFFN
Sbjct: 937  DVDEMNRILREKFVELYEAPILENLLESFQKAFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score = 1166 bits (3016), Expect = 0.0
 Identities = 557/660 (84%), Positives = 607/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+  AKVGSRLIE++I+TAYIQPP  Q ADGPPDIRPAF H ++TV KEQ+K+
Sbjct: 180  DNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKS 239

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVI+CDPLVR+GLDRTA+HMVIPYMPML+PP++WTGYDKGA+LFLPSYVMRTHGAR
Sbjct: 240  SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 299

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREAVKRAPREQ+Q VFEALDTLG+  WRVNKR+L +VDRIW+SGGRLADLVDR D+ L
Sbjct: 300  QQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVAL 359

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKPDTEDEA+L+KW+W L+  KKENSERHSQRCD+ELKLAVARKMKDE+GF+YPHNLDF
Sbjct: 360  PEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 419

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSYDGRI
Sbjct: 420  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 479

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHLEDIFDSADRPLEG+RWWLGAEDPFQCLAVCINL+EALR  SPET ISH+PVH 
Sbjct: 480  AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 539

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+ IA RVL+IM+ DA KDPA+DP A
Sbjct: 540  DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDA 599

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RAR+L++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER  I DD ELF+ASCYAAK
Sbjct: 600  ARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAK 659

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
             TLTALGEMFQAARSIM+WLGDCAK+IA EN+PV+WTTPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 660  VTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSL 719

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK  GLNFAGVHDSYWTHAC
Sbjct: 720  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 779

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD MN+ILREKFVELY+T ILENLL SF+K           ERGDFDLKDVL SPYFFN
Sbjct: 780  DVDTMNKILREKFVELYDTPILENLLGSFEKSFPELKFPPLPERGDFDLKDVLGSPYFFN 839


>ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus mume]
          Length = 1006

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 554/657 (84%), Positives = 605/657 (92%)
 Frame = -2

Query: 2795 KPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRR 2616
            KPWGQEA  KVG RLI++L+DTAYIQPPVDQ+ DGPPDIRPAF H LKT+TK+ +KTSRR
Sbjct: 350  KPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSRR 409

Query: 2615 YGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQR 2436
            YGVIECDPLVRKG+D+TARHMV+PYMPMLVPP+NWTGYD+GAYLFLPSYVMRTHGA+QQR
Sbjct: 410  YGVIECDPLVRKGMDKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQR 469

Query: 2435 EAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEK 2256
            E VKR PR+QL+PVFEALDTLG+  WRVNKR+LGV+DRIWASGGRLADLVDRED+ LPE+
Sbjct: 470  EVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEE 529

Query: 2255 PDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGR 2076
            PDTEDEAE+RKWKW+L+  KKENSERHSQRCDIELKLA +RKMKDE+GF+YPHNLDFRGR
Sbjct: 530  PDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGR 589

Query: 2075 AYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRIAFT 1896
            AYPMHP+LNHLGSD+CRGILEF+EGR LGKSGLRWLKI LANLYAGGVDKLS+D R AFT
Sbjct: 590  AYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFT 649

Query: 1895 ENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGS 1716
            ENH+++IFDSADRPLEGRRWWLGAEDPFQCLA CINL EALR  SPETTIS++PVH DGS
Sbjct: 650  ENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGS 709

Query: 1715 CNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRA 1536
            CNGLQHYAALGRDKLGA AVNLV G+KPADVYS IAARVLDIM+ DA+KDPA++P A  A
Sbjct: 710  CNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHA 769

Query: 1535 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTL 1356
            RLLINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD  LF A+CYAA+TTL
Sbjct: 770  RLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGSIADDTALFVAACYAARTTL 829

Query: 1355 TALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 1176
            TALGEMF+AARSIMSWLG+CAKVIASENQPVRW TPLGLPVVQPYR+LGRHLIKTSLQVL
Sbjct: 830  TALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVL 889

Query: 1175 TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHACDVD 996
            TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHACD+D
Sbjct: 890  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDID 949

Query: 995  EMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            EMNRILREKFVELYE  ILENLLE FQ+           +RGDFDL+DVLESPYFFN
Sbjct: 950  EMNRILREKFVELYEAPILENLLEGFQRSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Elaeis
            guineensis]
          Length = 1042

 Score = 1163 bits (3009), Expect = 0.0
 Identities = 566/666 (84%), Positives = 608/666 (91%), Gaps = 6/666 (0%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+ QAKVGSRLIE+L++TAYIQPP++QLAD PPDIRPAFRHYL+ V KEQ+K 
Sbjct: 377  DDSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKI 436

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYG IECDPLVR+GLDRTARHMVIPYMPMLVPP++W  YDKGA+LFLPSYVMRTHG+R
Sbjct: 437  SRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSR 496

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQR AVKRAPREQ+Q VFEALDTLGN  WRVNKR+L +VDRIW+SGGRLA+LVDR+D  L
Sbjct: 497  QQRAAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPL 556

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKP+TED AE+RKWKW+L+ VKKENSERHSQRCD+E+KLAVARKMKDE+GF+YPHNLDF
Sbjct: 557  PEKPETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDF 616

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGL WLKI LANLYAGGVDKLSYDGRI
Sbjct: 617  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRI 676

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL+DIFDSADRPLEGRRWWLGAEDPFQCLAVCINL+EALR SSPE+TISH+PVH 
Sbjct: 677  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQ 736

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYS IAARV +IMQ+DAQKDPA DP A
Sbjct: 737  DGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNA 796

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
              ARLLINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD E F ASCYAAK
Sbjct: 797  SHARLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAK 856

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIM WLGDCAKVIASENQ VRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 857  TTLTALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSL 916

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNF------AGVHDS 1023
            QVL+LQRETDK+MVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNF      AGVHDS
Sbjct: 917  QVLSLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGCLFSAGVHDS 976

Query: 1022 YWTHACDVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLE 843
            YWTHACDVDEMNRILR+KFVELYE  ILENL ESFQ+           ERGDFDLKDVLE
Sbjct: 977  YWTHACDVDEMNRILRDKFVELYEIPILENLRESFQQSFPSLGFPPLPERGDFDLKDVLE 1036

Query: 842  SPYFFN 825
            S YFFN
Sbjct: 1037 STYFFN 1042


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 553/657 (84%), Positives = 606/657 (92%)
 Frame = -2

Query: 2795 KPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRR 2616
            KPWGQEA  KVG RLI++L+DTAYIQPPVDQ+ DGPPDIRPAF H LKT+T++ +KTSRR
Sbjct: 350  KPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRR 409

Query: 2615 YGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQR 2436
            YGVIECDP+VRKG+++TARHMV+PYMPMLVPP+NWTGYD+GAYLFLPSYVMRTHGA+QQR
Sbjct: 410  YGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQR 469

Query: 2435 EAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEK 2256
            E VKR PR+QL+PVFEALDTLG+  WRVNKR+LGV+DRIWASGGRLADLVDRED+ LPE+
Sbjct: 470  EVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEE 529

Query: 2255 PDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGR 2076
            PDTEDEAE+RKWKW+L+  KKENSERHSQRCDIELKLA +RKMKDE+GF+YPHNLDFRGR
Sbjct: 530  PDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGR 589

Query: 2075 AYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRIAFT 1896
            AYPMHP+LNHLGSD+CRGILEF+EGR LGKSGLRWLKI LANLYAGGVDKLS+D R AFT
Sbjct: 590  AYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFT 649

Query: 1895 ENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGS 1716
            ENH+++IFDSADRPLEGRRWWLGAEDPFQCLA CINL EALR  SPETTIS++PVH DGS
Sbjct: 650  ENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGS 709

Query: 1715 CNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRA 1536
            CNGLQHYAALGRDKLGA AVNLV G+KPADVYS IAARVLDIM+ DA+KDPA++P A  A
Sbjct: 710  CNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHA 769

Query: 1535 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTL 1356
            RLLINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG I DD  LFAA+CYAA+TTL
Sbjct: 770  RLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTL 829

Query: 1355 TALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 1176
            TALGEMF+AARSIMSWLG+CAKVIASENQPVRW TPLGLPVVQPYR+LGRHLIKTSLQVL
Sbjct: 830  TALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVL 889

Query: 1175 TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHACDVD 996
            TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHACD+D
Sbjct: 890  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDID 949

Query: 995  EMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            EMNRILREKFVELYE  ILENLLE FQ+           +RGDFDL+DVLESPYFFN
Sbjct: 950  EMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 557/660 (84%), Positives = 607/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+A AKVGSRLIE++I+TAYIQPP  Q ADGPPDIRPAF H ++TV +EQ+K+
Sbjct: 324  DNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKS 383

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVI+CDPLVR+GLDRTA+HMVIPYMPML+PP++WTGYDKGA+LFLPSYVMRTHGAR
Sbjct: 384  SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 443

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQR+AV+RAPREQ+Q VFEAL+TLG+  WRVNKR+L +VDRIW+SGGRLADLVDR D+ L
Sbjct: 444  QQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVAL 503

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKPDTEDE +L+KW+W LR  KKENSERHSQRCD+ELKLAVARKMKDEDGF+YPHNLDF
Sbjct: 504  PEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDF 563

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSYDGRI
Sbjct: 564  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 623

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHLEDIFDSADRPLEG+RWWLGAEDPFQCLAVCINL+EALR  SPET ISH+PVH 
Sbjct: 624  AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 683

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+ IA RV++IM+ DA KDPA+DP A
Sbjct: 684  DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDA 743

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLL++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER  I DD ELF+ASCYAAK
Sbjct: 744  ARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAK 803

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
             TLTALGEMFQAARSIM+WLGDCAKVIA EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 804  VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 863

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK  GLNFAGVHDSYWTHAC
Sbjct: 864  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 923

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD MN+ILREKFVELY+T ILENLLESF+K           ERGDFDL DVL SPYFFN
Sbjct: 924  DVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 983


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase (mitochondrion) [Oryza
            sativa Japonica Group] gi|113630892|dbj|BAF24573.1|
            Os09g0246200 [Oryza sativa Japonica Group]
          Length = 1017

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 557/660 (84%), Positives = 607/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+A AKVGSRLIE++I+TAYIQPP  Q ADGPPDIRPAF H ++TV +EQ+K+
Sbjct: 358  DNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKS 417

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVI+CDPLVR+GLDRTA+HMVIPYMPML+PP++WTGYDKGA+LFLPSYVMRTHGAR
Sbjct: 418  SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 477

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQR+AV+RAPREQ+Q VFEAL+TLG+  WRVNKR+L +VDRIW+SGGRLADLVDR D+ L
Sbjct: 478  QQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVAL 537

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKPDTEDE +L+KW+W LR  KKENSERHSQRCD+ELKLAVARKMKDEDGF+YPHNLDF
Sbjct: 538  PEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDF 597

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSYDGRI
Sbjct: 598  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 657

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHLEDIFDSADRPLEG+RWWLGAEDPFQCLAVCINL+EALR  SPET ISH+PVH 
Sbjct: 658  AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 717

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+ IA RV++IM+ DA KDPA+DP A
Sbjct: 718  DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDA 777

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLL++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER  I DD ELF+ASCYAAK
Sbjct: 778  ARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAK 837

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
             TLTALGEMFQAARSIM+WLGDCAKVIA EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 838  VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 897

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK  GLNFAGVHDSYWTHAC
Sbjct: 898  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 957

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD MN+ILREKFVELY+T ILENLLESF+K           ERGDFDL DVL SPYFFN
Sbjct: 958  DVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 1017


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 557/660 (84%), Positives = 603/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SK WGQEA  KVG RLI++LI+ AYIQPPVDQL D PPDIRPAF H LKT+TK+  K 
Sbjct: 337  DTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKG 396

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVIECD LVRKGL++TARHMVIPYMPMLVPP NWTGYD+GAYLFLPSYVMRTHGA+
Sbjct: 397  SRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAK 456

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQRE VKR PR+QL+P+FEALDTLGN  WR+NKR+LGVVDR+WA+GGR+A LVDRED+ L
Sbjct: 457  QQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPL 516

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PEKPDTEDEAE++KWKW+++   K+N+ERHS RCD+ELKLAVARKM+DEDGF+YPHNLDF
Sbjct: 517  PEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDF 576

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKI LANLYAGGVDKLSY+GRI
Sbjct: 577  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRI 636

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AFTENHL+DIFDSADRPLEGRRWWL AEDPFQCLA CINLSEALR SSPETTISH+PVH 
Sbjct: 637  AFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQ 696

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYS IAARV+DIM+RDA+KDPA +P A
Sbjct: 697  DGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHA 756

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
              ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD E+F ASCYAA+
Sbjct: 757  LHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAAR 816

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMFQAARSIM+WLG+CAKVI+SENQPVRW TPLGLPVVQPYR+LGRHLIKTSL
Sbjct: 817  TTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSL 876

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVM KRQRTAFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHAC
Sbjct: 877  QVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHAC 936

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVDEMNRILREKFVELYE  ILENLLESFQK           ERGDFDL++VLESPYFFN
Sbjct: 937  DVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score = 1159 bits (2997), Expect = 0.0
 Identities = 554/662 (83%), Positives = 606/662 (91%)
 Frame = -2

Query: 2810 SSDLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQR 2631
            + D S+PWGQ+ QAKVGSRLIE+ +DTA+IQPP  Q +DG PDIRPAFRH ++TV KEQ+
Sbjct: 315  NQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQ 374

Query: 2630 KTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHG 2451
            K+SRRYGVI+CDPLVR+GLDRTA+HMVIPYMPML+PP+ WTGYDKGA+LFLPSYVMRTHG
Sbjct: 375  KSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHG 434

Query: 2450 ARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDI 2271
            ARQQREAVKRAPREQ+Q VFEAL+TLG+  WRVNKR+L +VDRIW+SGGRLADLVDR D+
Sbjct: 435  ARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDV 494

Query: 2270 VLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 2091
             LPEKPDTEDE  ++ WKW LR VKKENSERHSQRCD+ELKLAVARKMKDE+GF+YPHNL
Sbjct: 495  PLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNL 554

Query: 2090 DFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDG 1911
            DFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGL WLKI LANLYAGGVDKLSYDG
Sbjct: 555  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDG 614

Query: 1910 RIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPV 1731
            R+AFTENHLE+IFDSADRPLEG+RWWLGAEDPFQCLAVC+NL+EALR SSPETTISH+PV
Sbjct: 615  RVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPV 674

Query: 1730 HMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDP 1551
            H DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+ IA RVL+IM+ DAQKDP+ DP
Sbjct: 675  HQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDP 734

Query: 1550 VAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYA 1371
               RARL+++QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG I D+ ELF ASCYA
Sbjct: 735  DVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYA 794

Query: 1370 AKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 1191
            AK TLTALGEMFQAAR IM+WLGDCAKVIA EN+PVRWTTPLGLPVVQPYRKLGRHLIKT
Sbjct: 795  AKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKT 854

Query: 1190 SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTH 1011
            SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK  GLNFAGVHDSYWTH
Sbjct: 855  SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTH 914

Query: 1010 ACDVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYF 831
            ACDVD MN+ILREKFVELY+T ILENLLESF+K           ERGDFD+K+VLESPYF
Sbjct: 915  ACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESPYF 974

Query: 830  FN 825
            FN
Sbjct: 975  FN 976


>emb|CDP00493.1| unnamed protein product [Coffea canephora]
          Length = 808

 Score = 1157 bits (2993), Expect = 0.0
 Identities = 556/660 (84%), Positives = 606/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D SKPWGQ+AQ KVG RLI+++++TAYIQPPVDQ  DGPPDIRPAF H LKTV  E ++ 
Sbjct: 151  DASKPWGQDAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPDIRPAFVHTLKTV--ETQRG 208

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVIECDPLVRKGL+RTA+HMVIPYMPMLVPPLNWTGYD+GAYLFLPSY+MRTHGA+
Sbjct: 209  SRRYGVIECDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGYDRGAYLFLPSYIMRTHGAK 268

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREA++R P++QL+PVF+ALDTLG+  WRVNKR+LGV+DRIWASGGRLADLVDR+DI L
Sbjct: 269  QQREALRRCPKQQLEPVFQALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPL 328

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PE+PDTEDE E+RKWKW++  VKKENSERHSQRCDIELKLAVARKMKDE+GFFYPHNLDF
Sbjct: 329  PEEPDTEDEREIRKWKWKVNNVKKENSERHSQRCDIELKLAVARKMKDEEGFFYPHNLDF 388

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLG SGL WLKI LAN+Y GGVDKLS++GR 
Sbjct: 389  RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGNSGLNWLKIHLANVYGGGVDKLSHEGRA 448

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AF ENHLEDIFDSADRPLEGRRWWL AED FQCLA C+NLSEALR  SPETT+SHLP+H 
Sbjct: 449  AFAENHLEDIFDSADRPLEGRRWWLNAEDSFQCLATCMNLSEALRSPSPETTMSHLPIHQ 508

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYS IAARVLDIMQRDA +DPASDP  
Sbjct: 509  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAARDPASDPNV 568

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IE++ ELF+A+CYAAK
Sbjct: 569  LRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEEEAELFSAACYAAK 628

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMF+AARSIMSWLGDCAKVIA ENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 629  TTLTALGEMFEAARSIMSWLGDCAKVIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 688

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+AC+ AGLNFAGVHDSYWTHAC
Sbjct: 689  QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHAC 748

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD+MN+ILR+KFVELYE  ILE+LL++FQK           ERGDFDL++VLESPYFFN
Sbjct: 749  DVDQMNKILRQKFVELYEAPILEDLLDNFQKSFPKLKFPPLPERGDFDLREVLESPYFFN 808


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1154 bits (2986), Expect = 0.0
 Identities = 563/661 (85%), Positives = 603/661 (91%), Gaps = 1/661 (0%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVD-QLADGPPDIRPAFRHYLKTVTKEQRK 2628
            D SKPWG EA+AKVGSRLIE+L+ TAYIQPPVD QLAD PPDIRPAF H  KTV +E +K
Sbjct: 375  DNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKK 434

Query: 2627 TSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGA 2448
              RR+GVIECDPLV+KGL+RTARHMVIPY+PMLVPPL WTGYDKGA+LFLPSYVMRTHGA
Sbjct: 435  IGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGA 494

Query: 2447 RQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIV 2268
            RQQREAVKRAPR QL+PVFEAL+TLGN  WR+NKR+  VVDRIWA GG LADLVDR D+ 
Sbjct: 495  RQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVP 554

Query: 2267 LPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 2088
            LPEKPDTEDEA+LRKWKW+++ VKK NSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD
Sbjct: 555  LPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 614

Query: 2087 FRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGR 1908
            FRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG SGL WLKI LANL+AGGVDKLS++GR
Sbjct: 615  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGR 674

Query: 1907 IAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVH 1728
            I FTENHL+DIFDSADRPLEG+RWWL AEDPFQ LA CINLSEALR SSPETTISH+PVH
Sbjct: 675  ITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVH 734

Query: 1727 MDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPV 1548
             DGSCNGLQHYAALGRD+LGATAVNLVAGEKPADVYS IAARVLDIM+RDA+KDPA  P 
Sbjct: 735  QDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPD 794

Query: 1547 AKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAA 1368
            A RAR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD ELF A+CYAA
Sbjct: 795  ALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAA 854

Query: 1367 KTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTS 1188
            K TLTALGEMFQAARSIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTS
Sbjct: 855  KITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTS 914

Query: 1187 LQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHA 1008
            LQVLTLQRET+ +MVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHA
Sbjct: 915  LQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHA 974

Query: 1007 CDVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFF 828
            CDVDEMNR+LREKFV+LYET ILENLLESFQ+           ERGDFDL++VLESPYFF
Sbjct: 975  CDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFF 1034

Query: 827  N 825
            N
Sbjct: 1035 N 1035


>ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Nicotiana
            tomentosiformis]
          Length = 1002

 Score = 1152 bits (2979), Expect = 0.0
 Identities = 551/660 (83%), Positives = 604/660 (91%)
 Frame = -2

Query: 2804 DLSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKT 2625
            D  KPWGQ+   KVG RLI++L++TAYIQPP DQL DGPPDIRPAF H LKTV  E  K 
Sbjct: 345  DDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKG 402

Query: 2624 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGAR 2445
            SRRYGVI+CDPLVRKGLD+TARHMVIPYMPMLVPP +W GYDKG YLFLPSY+MRTHGA+
Sbjct: 403  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAK 462

Query: 2444 QQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVL 2265
            QQREAVKR P++QL+PVF+ALDTLGN  WRVN+++LG+VDRIWASGGRLADLVDRED+ L
Sbjct: 463  QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPL 522

Query: 2264 PEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 2085
            PE PDTEDEAE+RKWKW+++GVKKEN ERHSQRCDIELKLAVARKMKDEDGF+YPHNLDF
Sbjct: 523  PEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 582

Query: 2084 RGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIQLANLYAGGVDKLSYDGRI 1905
            RGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG SGLRWLKI LAN+Y GGVDKLSY+GR+
Sbjct: 583  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRV 642

Query: 1904 AFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHM 1725
            AF+ENHLEDIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALR  SPET IS++P+H 
Sbjct: 643  AFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 702

Query: 1724 DGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVA 1545
            DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IAARVLDIM+RDA KDPA+DP  
Sbjct: 703  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNV 762

Query: 1544 KRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAK 1365
             RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELFAA+CYAAK
Sbjct: 763  MRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAK 822

Query: 1364 TTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 1185
            TTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSL
Sbjct: 823  TTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSL 882

Query: 1184 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLNFAGVHDSYWTHAC 1005
            Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHAC
Sbjct: 883  QILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHAC 942

Query: 1004 DVDEMNRILREKFVELYETQILENLLESFQKXXXXXXXXXXXERGDFDLKDVLESPYFFN 825
            DVD+MN+ILREKFVELY+  ILENLLESFQ+           ERGDFDL++VLESPYFFN
Sbjct: 943  DVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002