BLASTX nr result
ID: Cinnamomum24_contig00001217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00001217
(649 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AET98835.1| type 2 ribosome-inactivating protein [Cinnamomum ... 216 6e-54
ref|XP_010922360.1| PREDICTED: ricin-like [Elaeis guineensis] gi... 190 5e-46
pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Iso... 174 3e-41
gb|AAK82460.1| type 2 ribosome-inactivating protein cinnamomin I... 174 3e-41
gb|AAK82458.1| type 2 ribosome-inactivating protein cinnamomin I... 171 3e-40
gb|AAK82459.1| type 2 ribosome-inactivating protein cinnamomin I... 168 2e-39
gb|ACV60361.2| putative type 2 ribosome-inactivating protein [Ca... 162 1e-37
ref|XP_010905315.1| PREDICTED: ricin-like [Elaeis guineensis] 159 1e-36
gb|ADF45510.1| type 2 ribosome-inactivating protein precursor [C... 158 2e-36
gb|AAF68978.2|AF259548_1 type II ribosome-inactivating protein c... 154 3e-35
gb|ADF45512.1| type 2 ribosome-inactivating protein precursor [C... 154 4e-35
ref|NP_001295735.1| ricin-like precursor [Jatropha curcas] gi|38... 132 2e-28
ref|XP_002529062.1| ricin-agglutinin family protein [Ricinus com... 129 2e-27
ref|XP_002532189.1| ricin-agglutinin family protein [Ricinus com... 123 9e-26
ref|XP_002532193.1| ricin-agglutinin family protein [Ricinus com... 119 2e-24
gb|AAN86130.1|AF249280_1 type 2 ribosome-inactivating protein Ni... 117 5e-24
sp|P33183.2|NIGB_SAMNI RecName: Full=Nigrin b; AltName: Full=Agg... 117 5e-24
gb|AAL04123.1|AF409135_1 ribosome-inactivating protein [Sambucus... 117 5e-24
sp|P28590.1|ABRC_ABRPR RecName: Full=Abrin-c; Contains: RecName:... 117 7e-24
gb|ACV85693.1| ricin-like protein 4 [synthetic construct] 116 9e-24
>gb|AET98835.1| type 2 ribosome-inactivating protein [Cinnamomum camphora]
Length = 585
Score = 216 bits (551), Expect = 6e-54
Identities = 120/210 (57%), Positives = 146/210 (69%), Gaps = 8/210 (3%)
Frame = +3
Query: 42 MKGNMKAWVVVAIWVCWSAMVGPAWVCPLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIED 221
M+GNMK W+VVA WV W+A+VGPAWVCP MV E HTLNY TV FT T SY QFIE
Sbjct: 1 MRGNMKVWIVVATWVWWNAVVGPAWVCPFMVVEPHTLNYQTVTFTTKQATKTSYAQFIEA 60
Query: 222 LRARLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNS-LPFAVDVTNASVVAYEGK 398
LRA+L SGEE HG+PVTRER+TV D++R+VL+ELS+ A +S + A++VT+A VVAY
Sbjct: 61 LRAQLASGEEPHGIPVTRERSTVPDSQRFVLVELSNWAADSPVTLALNVTDAYVVAYRTG 120
Query: 399 SQSFFLQEDIPD-----LFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAIS 563
S+SFFL+ED PD LFP++ +R L F +Y DLE A R I+LG PL +AIS
Sbjct: 121 SRSFFLREDNPDPAIDNLFPDT-QRQTLRFGGNYNDLEDAAGQRRDTIELGMEPLENAIS 179
Query: 564 NLEYHNDIVQ--IARDLIVVNQMILEAVRF 647
L N IAR LIVV QM+ EAVRF
Sbjct: 180 TLRVSNTDPDGPIARSLIVVIQMVAEAVRF 209
>ref|XP_010922360.1| PREDICTED: ricin-like [Elaeis guineensis]
gi|743787211|ref|XP_010922361.1| PREDICTED: ricin-like
[Elaeis guineensis]
Length = 570
Score = 190 bits (483), Expect = 5e-46
Identities = 107/209 (51%), Positives = 141/209 (67%), Gaps = 7/209 (3%)
Frame = +3
Query: 42 MKGNMKAWVVVAIWVCWSAMVGPAWVCPLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIED 221
MKGNMK W VA WV W+A+VGPAWVC V +++TL Y TV+FT T +SYTQF++D
Sbjct: 1 MKGNMKVWKAVATWVWWAAIVGPAWVCTSTVEDKYTLRYNTVRFTTVNATRESYTQFMKD 60
Query: 222 LRARLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKS 401
LR +L SG+E +G+PV R+ +TV D++R++L+ELS+ S+ AVDV NA VVAY+
Sbjct: 61 LRDQLASGDERYGIPVLRDPSTVPDSQRFLLVELSNWGEASVTLAVDVINAYVVAYQAGD 120
Query: 402 QSFFLQEDIPD-----LFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISN 566
QS+F + D PD LF N+ ER L F+SSY L+RVA +R NIDLG L +AIS+
Sbjct: 121 QSYFFR-DAPDVAFSNLFTNT-ERQTLSFNSSYPALQRVAGEDRENIDLGILALEEAISS 178
Query: 567 LEYHNDIVQ--IARDLIVVNQMILEAVRF 647
L + + Q AR LIV QM+ EA RF
Sbjct: 179 LHRTSSVQQNTQARSLIVSIQMVSEAARF 207
>pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Isoform Iii)
gi|223365706|pdb|2VLC|B Chain B, Crystal Structure Of
Natural Cinnamomin (Isoform Iii)
Length = 570
Score = 174 bits (442), Expect = 3e-41
Identities = 106/183 (57%), Positives = 124/183 (67%), Gaps = 8/183 (4%)
Frame = +3
Query: 123 PLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGEEAHGVPVTRERATVSDAE 302
P MV E HTLNY TV FT T SYTQFIE LRA+L SGEE HG+PV RER+TV D++
Sbjct: 12 PFMVVEPHTLNYQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSK 71
Query: 303 RYVLMELSDQAGNS-LPFAVDVTNASVVAYEGKSQSFFLQEDIPD-----LFPNSGERNI 464
R++L+ELS+ A +S + AVDVTNA VVAY SQSFFL+ED PD L P++ +R
Sbjct: 72 RFILVELSNWAADSPVTLAVDVTNAYVVAYRTGSQSFFLREDNPDPAIENLLPDT-KRYT 130
Query: 465 LPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYHNDIVQ--IARDLIVVNQMILEA 638
PF SYTDLERVA R I LG PL +AIS L N Q +AR LIVV QM+ EA
Sbjct: 131 FPFSGSYTDLERVAGERREEILLGMDPLENAISALWISNLNQQRALARSLIVVIQMVAEA 190
Query: 639 VRF 647
VRF
Sbjct: 191 VRF 193
>gb|AAK82460.1| type 2 ribosome-inactivating protein cinnamomin III precursor
[Cinnamomum camphora]
Length = 580
Score = 174 bits (442), Expect = 3e-41
Identities = 106/183 (57%), Positives = 124/183 (67%), Gaps = 8/183 (4%)
Frame = +3
Query: 123 PLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGEEAHGVPVTRERATVSDAE 302
P MV E HTLNY TV FT T SYTQFIE LRA+L SGEE HG+PV RER+TV D++
Sbjct: 22 PFMVVEPHTLNYQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSK 81
Query: 303 RYVLMELSDQAGNS-LPFAVDVTNASVVAYEGKSQSFFLQEDIPD-----LFPNSGERNI 464
R++L+ELS+ A +S + AVDVTNA VVAY SQSFFL+ED PD L P++ +R
Sbjct: 82 RFILVELSNWAADSPVTLAVDVTNAYVVAYRTGSQSFFLREDNPDPAIENLLPDT-KRYT 140
Query: 465 LPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYHNDIVQ--IARDLIVVNQMILEA 638
PF SYTDLERVA R I LG PL +AIS L N Q +AR LIVV QM+ EA
Sbjct: 141 FPFSGSYTDLERVAGERREEILLGMDPLENAISALWISNLNQQRALARSLIVVIQMVAEA 200
Query: 639 VRF 647
VRF
Sbjct: 201 VRF 203
>gb|AAK82458.1| type 2 ribosome-inactivating protein cinnamomin I precursor
[Cinnamomum camphora]
Length = 581
Score = 171 bits (433), Expect = 3e-40
Identities = 104/183 (56%), Positives = 123/183 (67%), Gaps = 8/183 (4%)
Frame = +3
Query: 123 PLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGEEAHGVPVTRERATVSDAE 302
P MV E HT+NY TV FT T SYTQFIE LRA+L SGEE HG+PV RER+TV D++
Sbjct: 22 PFMVVEPHTINYQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSK 81
Query: 303 RYVLMELSDQAGNS-LPFAVDVTNASVVAYEGKSQSFFLQEDIPD-----LFPNSGERNI 464
R++L+ELS+ A +S + AVDVTNA VVAY SQSFFL+ED PD L P++ +R
Sbjct: 82 RFILVELSNWAADSPVTLAVDVTNAYVVAYRTGSQSFFLREDNPDPAIENLLPDT-KRYT 140
Query: 465 LPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYHNDIVQ--IARDLIVVNQMILEA 638
PF SYTDLE VA R I LG PL +AIS L N Q +AR LIVV QM+ EA
Sbjct: 141 FPFSGSYTDLEGVAGERREEILLGMDPLENAISALWISNLNQQRALARSLIVVIQMVAEA 200
Query: 639 VRF 647
VRF
Sbjct: 201 VRF 203
>gb|AAK82459.1| type 2 ribosome-inactivating protein cinnamomin II precursor
[Cinnamomum camphora]
Length = 580
Score = 168 bits (426), Expect = 2e-39
Identities = 103/183 (56%), Positives = 123/183 (67%), Gaps = 8/183 (4%)
Frame = +3
Query: 123 PLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGEEAHGVPVTRERATVSDAE 302
P MV E HT+NY TV FT T SYTQFIE LRA+L SGEE HG+PV R+ +TV D++
Sbjct: 22 PFMVVEPHTINYQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRDGSTVPDSK 81
Query: 303 RYVLMELSDQAGNS-LPFAVDVTNASVVAYEGKSQSFFLQEDIPD-----LFPNSGERNI 464
R++L+ELS+ A +S + AVDVTNA VVAY SQSFFL+ED PD L P++ +R
Sbjct: 82 RFILVELSNWAADSPVALAVDVTNAYVVAYRTGSQSFFLREDNPDPAIENLLPDT-KRYT 140
Query: 465 LPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYHNDIVQ--IARDLIVVNQMILEA 638
PF SYTDLERVA R I LG PL +AIS L N Q +AR LIVV QM+ EA
Sbjct: 141 FPFSGSYTDLERVAGELREEILLGMDPLENAISALWTSNLNQQRALARSLIVVIQMVAEA 200
Query: 639 VRF 647
VRF
Sbjct: 201 VRF 203
>gb|ACV60361.2| putative type 2 ribosome-inactivating protein [Camellia sinensis]
gi|294861494|gb|ADF45509.1| type 2 ribosome-inactivating
protein precursor [Camellia sinensis]
Length = 570
Score = 162 bits (410), Expect = 1e-37
Identities = 96/205 (46%), Positives = 129/205 (62%), Gaps = 7/205 (3%)
Frame = +3
Query: 54 MKAWVVVAIWVCWSAMVGPAWVCPLMVAEQH-TLNYPTVKFTLDGVTGDSYTQFIEDLRA 230
MK W VVA WV W+A+VGPAWVC V + TL Y TV+FT + T +SYTQF+E LR
Sbjct: 1 MKVWNVVATWVWWTALVGPAWVCTSTVEDTKLTLRYNTVRFTTERATKESYTQFMEALRD 60
Query: 231 RLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKSQSF 410
+L SG EAH +PV R+ +TV ++R++L+ELSD AG ++ AVDV NA VVAY+ QS+
Sbjct: 61 QLGSGYEAHTIPVLRDVSTVDTSQRFLLVELSDFAGATITLAVDVQNAYVVAYQAGDQSY 120
Query: 411 FLQEDIPDL----FPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYH 578
F + D P++ N +++ F SY DLE + +R +IDLG L AI +L
Sbjct: 121 FFR-DAPEVAFSNLFNDTQQSTFNFTGSYVDLEGRSRHDREDIDLGILALERAIFSLSRS 179
Query: 579 NDIVQ--IARDLIVVNQMILEAVRF 647
+ + IAR LIV QM+ EA RF
Sbjct: 180 SAAAESTIARSLIVCIQMVSEAARF 204
>ref|XP_010905315.1| PREDICTED: ricin-like [Elaeis guineensis]
Length = 564
Score = 159 bits (402), Expect = 1e-36
Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 6/204 (2%)
Frame = +3
Query: 54 MKAWVVVAIWVCWSAMVGPAWVCPLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIEDLRAR 233
M+ VA WV W+A+VG AWVC V +++TL Y TV T T +SYTQF+E LRA+
Sbjct: 1 MEVRKAVATWVWWTAIVGAAWVCVSTVEDKYTLRYNTVSLTTVNATRESYTQFMEALRAQ 60
Query: 234 LKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKSQSFF 413
L SG E+H +PV R+ +TV D++R+V +ELS+ A S+ AVDVT A VV Y +FF
Sbjct: 61 LASGYESHAIPVLRDPSTVPDSQRFVYVELSNWASESVTLAVDVTTAYVVGYRTGDWAFF 120
Query: 414 LQEDI----PDLFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYHN 581
+ I D+FP +R L F SSYT+L+R A R +IDLG L +AIS++
Sbjct: 121 FSDAIWARSTDVFPGL-QRGTLAFGSSYTELQRSAGRNREDIDLGIGALDEAISSVGRTG 179
Query: 582 DIVQ--IARDLIVVNQMILEAVRF 647
D+ +AR LIV QM+ E RF
Sbjct: 180 DVPMSTLARSLIVCIQMVSEGARF 203
>gb|ADF45510.1| type 2 ribosome-inactivating protein precursor [Camellia sinensis]
gi|294861498|gb|ADF45511.1| type 2 ribosome-inactivating
protein precursor [Camellia sinensis]
Length = 570
Score = 158 bits (400), Expect = 2e-36
Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 7/205 (3%)
Frame = +3
Query: 54 MKAWVVVAIWVCWSAMVGPAWVCPLMVAEQH-TLNYPTVKFTLDGVTGDSYTQFIEDLRA 230
MK W VVA WV W+A+VGPAWVC V + TL Y TV+FT + T +SYTQF+E LR
Sbjct: 1 MKVWNVVATWVWWTALVGPAWVCTSTVEDTKLTLRYNTVRFTTENATKESYTQFMEALRD 60
Query: 231 RLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKSQSF 410
+L SG EAH +PV R+ +TV ++R++L+ELS+ ++ AVDV NA VVAY+ QS+
Sbjct: 61 QLGSGYEAHTIPVLRDVSTVDTSQRFLLVELSNFGEATITLAVDVQNAYVVAYQAGDQSY 120
Query: 411 FLQEDIPDL----FPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYH 578
F + D P++ N +++ F SY DLE + +R +IDLG L AIS+L
Sbjct: 121 FFR-DAPEVAFSNLFNDTQQSTFNFTGSYVDLEGRSRQDREDIDLGILALELAISSLRRS 179
Query: 579 NDIVQ--IARDLIVVNQMILEAVRF 647
+ + IAR LIV QM+ EA RF
Sbjct: 180 SAAAESTIARSLIVCIQMVSEAARF 204
>gb|AAF68978.2|AF259548_1 type II ribosome-inactivating protein cinnamomin [Cinnamomum
camphora]
Length = 549
Score = 154 bits (390), Expect = 3e-35
Identities = 97/172 (56%), Positives = 115/172 (66%), Gaps = 8/172 (4%)
Frame = +3
Query: 156 YPTVKFTLDGVTGDSYTQFIEDLRARLKSGEEAHGVPVTRERATVSDAERYVLMELSDQA 335
Y TV FT T SYTQFIE LRA+L SGEE HG+PV RER+TV D++R++L+ELS+ A
Sbjct: 1 YQTVTFTTKKATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSKRFILVELSNWA 60
Query: 336 GNS-LPFAVDVTNASVVAYEGKSQSFFLQEDIPD-----LFPNSGERNILPFDSSYTDLE 497
+S + AVDVTNA VVAY SQSFFL+ED PD L P++ +R PF SYTDLE
Sbjct: 61 ADSPVTLAVDVTNAYVVAYRTGSQSFFLREDNPDPAIENLLPDT-KRYTFPFSGSYTDLE 119
Query: 498 RVANVERGNIDLGRTPLADAISNLEYHNDIVQ--IARDLIVVNQMILEAVRF 647
VA R I LG PL +AIS L N Q +AR LIVV QM+ EAVRF
Sbjct: 120 GVAGERREEILLGMDPLENAISALWISNLNQQRALARSLIVVIQMVAEAVRF 171
>gb|ADF45512.1| type 2 ribosome-inactivating protein precursor [Camellia sinensis]
Length = 570
Score = 154 bits (389), Expect = 4e-35
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Frame = +3
Query: 54 MKAWVVVAIWVCWSAMVGPAWVCPLMVAEQH-TLNYPTVKFTLDGVTGDSYTQFIEDLRA 230
MK W VVA WV W+A+VGPAWVC V + TL Y TV+F + T +SYTQF E LR
Sbjct: 1 MKVWNVVATWVWWTALVGPAWVCTSTVEDTKLTLRYNTVRFPTENATKESYTQFTEALRD 60
Query: 231 RLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKSQSF 410
+L SG EAH +PV R +TV ++R++L+ELS+ ++ AVDV NA VVAY+ QS+
Sbjct: 61 QLGSGYEAHTIPVLRNVSTVDTSQRFLLVELSNWGEATITLAVDVQNAYVVAYQAGDQSY 120
Query: 411 FLQEDIPDL----FPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYH 578
F + D P++ N +++ F SY DLE ++ +R +IDLG L AI +L
Sbjct: 121 FFR-DAPEVAFSNLFNDTQQSTFTFTGSYVDLEGRSHQDREDIDLGILALELAILSLRRS 179
Query: 579 NDIVQ--IARDLIVVNQMILEAVRF 647
+ + IAR LIV QM+ EA RF
Sbjct: 180 SSAAESTIARSLIVCIQMVSEAARF 204
>ref|NP_001295735.1| ricin-like precursor [Jatropha curcas] gi|388564818|gb|AFK73425.1|
type 2 ribosomal inactivating protein [Jatropha curcas]
gi|643725759|gb|KDP34680.1| hypothetical protein
JCGZ_10885 [Jatropha curcas]
Length = 551
Score = 132 bits (331), Expect = 2e-28
Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 6/204 (2%)
Frame = +3
Query: 54 MKAWVVVAIWVCWSAMVGPAWVCPLMVAE---QHTLNYPTVKFTLDGVTGDSYTQFIEDL 224
MK W W+CW+ + +C + ++L YPT+ FT++ + YT+F++ +
Sbjct: 1 MKVWT----WLCWTVIFASTCICTSKAEDGTNDNSLGYPTLNFTINVKDKEGYTRFLQSV 56
Query: 225 RARLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKSQ 404
R +L SG + HG+ V + +T+ ++R++L++LS A + A+DV A VVAY ++Q
Sbjct: 57 RDQLTSGNQIHGISVLPDISTLPVSQRFLLLKLSSSATTPITLALDVATAGVVAYGFQNQ 116
Query: 405 SFFLQEDI--PDLFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEYH 578
S+F + + +LF N ++N LPF SSY +LE + R IDLG PL +A+SN+ +
Sbjct: 117 SYFFNDKLAFSNLF-NDTKQNTLPFGSSYGELENSTGMPRSKIDLGLLPLNEAVSNIVAN 175
Query: 579 N-DIVQIARDLIVVNQMILEAVRF 647
N +A LIVV QM+ EA RF
Sbjct: 176 NIKTEDLASCLIVVMQMVSEAARF 199
>ref|XP_002529062.1| ricin-agglutinin family protein [Ricinus communis]
gi|223531474|gb|EEF33306.1| ricin-agglutinin family
protein [Ricinus communis]
Length = 571
Score = 129 bits (323), Expect = 2e-27
Identities = 84/218 (38%), Positives = 122/218 (55%), Gaps = 16/218 (7%)
Frame = +3
Query: 42 MKGNMKAWV--VVAIWVCW--SAMVGPAWVCPLMVAEQHTLNYPTVKFTLDGVTGDSYTQ 209
MKGN AW+ VVAIW+ + +++ GP VA +YPTV+FT T SY
Sbjct: 1 MKGNTLAWLLYVVAIWLWFGSTSLAGP-------VAYTSLQDYPTVRFTTGYATAGSYRL 53
Query: 210 FIEDLRARLKSGEEA-HGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVA 386
FI LR RL +G++ HG+PV R+R + +R+VL+ELS+ + A+DVT A+VV
Sbjct: 54 FITSLRNRLATGQDVRHGIPVLRDRVGLPIVQRFVLVELSNWLQEPVILALDVTTANVVG 113
Query: 387 YEGKSQSFFLQEDIPD-------LFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTP 545
+ ++F D PD LF ++ +R F +Y+ LE A+ ER IDLG P
Sbjct: 114 FRAGKNAYFFHPDNPDDAQAITHLFKDTTQRQTFNFSGNYSALENQAHEERDKIDLGIQP 173
Query: 546 LADAISNLEYHN----DIVQIARDLIVVNQMILEAVRF 647
L +AIS++ ++ + +A DLIV QM+ EA RF
Sbjct: 174 LEEAISSIYLYSLGQAPLRALASDLIVCIQMVSEAARF 211
>ref|XP_002532189.1| ricin-agglutinin family protein [Ricinus communis]
gi|223528121|gb|EEF30192.1| ricin-agglutinin family
protein [Ricinus communis]
Length = 574
Score = 123 bits (308), Expect = 9e-26
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 15/217 (6%)
Frame = +3
Query: 42 MKGNMKAWV-VVAIWVCWSAMVGPAWVCP--LMVAEQHTLNYPTVKFTLDGVTGDSYTQF 212
++GN WV VA WV ++ G ++ +++ +Q YPTV FT G T +SY F
Sbjct: 3 LQGNFIVWVYAVATWVWLGSISGWSFTSQDNILLLKQ----YPTVTFTTAGATAESYRAF 58
Query: 213 IEDLRARLKSGEEA-HGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAY 389
I +R +L +G++ H +PV R R +R+VL++L++QA S+ AVDVTNA VV Y
Sbjct: 59 INAMRRQLLTGDDVRHQIPVLRNRVGFPINQRFVLVQLTNQAELSITLAVDVTNAYVVGY 118
Query: 390 EGKSQSFFLQEDIPD-------LFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPL 548
+ ++F Q D P+ LF ++ R F +Y LE++ + R NI+LG PL
Sbjct: 119 RAGNNAYFFQPDNPEDAEAITHLFTDAQTRQTFAFGGNYDRLEQLGGL-RENIELGNGPL 177
Query: 549 ADAISNLEYHN----DIVQIARDLIVVNQMILEAVRF 647
DAIS L Y++ + +AR +V QMI EAVRF
Sbjct: 178 EDAISALYYYSTGGTQLPALARSFMVCIQMISEAVRF 214
>ref|XP_002532193.1| ricin-agglutinin family protein [Ricinus communis]
gi|223528125|gb|EEF30196.1| ricin-agglutinin family
protein [Ricinus communis]
Length = 575
Score = 119 bits (297), Expect = 2e-24
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Frame = +3
Query: 63 WV-VVAIWVCWSAMVGPAWVCPLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIEDLRARLK 239
W+ VA W+ + + G W L YP + FT G T SYT FI+ +R+ L
Sbjct: 11 WIYAVATWLWFGSTSG--WSFTLGDNNIFLKQYPIINFTTAGATAQSYTNFIDAVRSHLT 68
Query: 240 SGEEA-HGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGKSQSFFL 416
+G++ H +PV R R + +R+VL++LS+QA +S+ A+DVTNA VV Y + ++F
Sbjct: 69 TGDDVRHEIPVLRNRVGLPINQRFVLVQLSNQAEHSVTLAMDVTNAYVVGYRAGNNAYFF 128
Query: 417 QEDIPD-------LFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAISNLEY 575
+ D P+ LF ++ F +Y LE++ + R NI+LG PL DAIS L Y
Sbjct: 129 RPDSPEDAEAITHLFTDAQNPYTFAFGGNYDRLEQLGGL-RENIELGNGPLEDAISALYY 187
Query: 576 HN----DIVQIARDLIVVNQMILEAVRF 647
++ + +AR IV QMI EAVRF
Sbjct: 188 YSTGRIQLPTVARSFIVCIQMISEAVRF 215
>gb|AAN86130.1|AF249280_1 type 2 ribosome-inactivating protein Nigrin l precursor [Sambucus
nigra]
Length = 563
Score = 117 bits (293), Expect = 5e-24
Identities = 69/171 (40%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Frame = +3
Query: 150 LNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGE-EAHGVPVTRERATVSDAERYVLMELS 326
++YP+V F LDG +Y F+ +LR + +G E +G+PV R + V R+VL+ L+
Sbjct: 26 IDYPSVSFNLDGAKSATYRDFLSNLRKTVATGTYEVNGLPVLRRESEVQVKSRFVLVPLT 85
Query: 327 DQAGNSLPFAVDVTNASVVAYEGKSQSFFLQE----DIPDLFPNSGERNILPFDSSYTDL 494
+ GN++ AVDVTN VVA+ G + S+F ++ +LF + ++N L F +Y +L
Sbjct: 86 NYNGNTVTLAVDVTNLYVVAFSGNANSYFFKDATEVQKSNLFVGT-KQNTLSFTGNYDNL 144
Query: 495 ERVANVERGNIDLGRTPLADAISNLEYHNDIVQIARDLIVVNQMILEAVRF 647
E AN R +I+LG +PL AI++L YH D +AR L+VV QM+ EA RF
Sbjct: 145 ETAANTRRESIELGPSPLDGAITSL-YHGD--SVARSLLVVIQMVSEAARF 192
>sp|P33183.2|NIGB_SAMNI RecName: Full=Nigrin b; AltName: Full=Agglutinin V; AltName:
Full=SNAV; Contains: RecName: Full=Nigrin b A chain;
AltName: Full=rRNA N-glycosidase; Contains: RecName:
Full=Nigrin b B chain; Flags: Precursor [Sambucus nigra]
gi|1754981|gb|AAB39475.1| ribosome inactivating protein
precursor [Sambucus nigra] gi|1589093|prf||2210286A
agglutinin V
Length = 563
Score = 117 bits (293), Expect = 5e-24
Identities = 69/171 (40%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Frame = +3
Query: 150 LNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGE-EAHGVPVTRERATVSDAERYVLMELS 326
++YP+V F LDG +Y F+ +LR + +G E +G+PV R + V R+VL+ L+
Sbjct: 26 IDYPSVSFNLDGAKSATYRDFLSNLRKTVATGTYEVNGLPVLRRESEVQVKSRFVLVPLT 85
Query: 327 DQAGNSLPFAVDVTNASVVAYEGKSQSFFLQE----DIPDLFPNSGERNILPFDSSYTDL 494
+ GN++ AVDVTN VVA+ G + S+F ++ +LF + ++N L F +Y +L
Sbjct: 86 NYNGNTVTLAVDVTNLYVVAFSGNANSYFFKDATEVQKSNLFVGT-KQNTLSFTGNYDNL 144
Query: 495 ERVANVERGNIDLGRTPLADAISNLEYHNDIVQIARDLIVVNQMILEAVRF 647
E AN R +I+LG +PL AI++L YH D +AR L+VV QM+ EA RF
Sbjct: 145 ETAANTRRESIELGPSPLDGAITSL-YHGD--SVARSLLVVIQMVSEAARF 192
>gb|AAL04123.1|AF409135_1 ribosome-inactivating protein [Sambucus nigra]
Length = 563
Score = 117 bits (293), Expect = 5e-24
Identities = 69/171 (40%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Frame = +3
Query: 150 LNYPTVKFTLDGVTGDSYTQFIEDLRARLKSGE-EAHGVPVTRERATVSDAERYVLMELS 326
++YP+V F LDG +Y F+ +LR + +G E +G+PV R + V R+VL+ L+
Sbjct: 26 IDYPSVSFNLDGAKSATYRDFLSNLRKTVATGTYEVNGLPVLRRESEVQVKSRFVLVPLT 85
Query: 327 DQAGNSLPFAVDVTNASVVAYEGKSQSFFLQE----DIPDLFPNSGERNILPFDSSYTDL 494
+ GN++ AVDVTN VVA+ G + S+F ++ +LF + ++N L F +Y +L
Sbjct: 86 NYNGNTVTLAVDVTNLYVVAFSGNANSYFFKDATEVQKSNLFVGT-KQNTLSFTGNYDNL 144
Query: 495 ERVANVERGNIDLGRTPLADAISNLEYHNDIVQIARDLIVVNQMILEAVRF 647
E AN R +I+LG +PL AI++L YH D +AR L+VV QM+ EA RF
Sbjct: 145 ETAANTRRESIELGPSPLDGAITSL-YHGD--SVARSLLVVIQMVSEAARF 192
>sp|P28590.1|ABRC_ABRPR RecName: Full=Abrin-c; Contains: RecName: Full=Abrin-c A chain;
AltName: Full=rRNA N-glycosidase; Contains: RecName:
Full=Linker peptide; Contains: RecName: Full=Abrin-c B
chain; Flags: Precursor [Abrus precatorius]
gi|16085|emb|CAA39202.1| preproabrin [Abrus precatorius]
Length = 562
Score = 117 bits (292), Expect = 7e-24
Identities = 87/210 (41%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Frame = +3
Query: 42 MKGNMKAWVVVAIWVC-WSAMVGPAWVCPLMVAEQHTLNYPTVKFTLDGVTGDSYTQFIE 218
M +K ++ W C +SA+ A P + Q + +KFT +G T SY QFIE
Sbjct: 1 MDKTLKLLILCLAWTCSFSALRCAARTYPPVATNQDQV----IKFTTEGATSQSYKQFIE 56
Query: 219 DLRARLKSGEEAHGVPVTRERATVSDAERYVLMELSDQAGNSLPFAVDVTNASVVAYEGK 398
LR RL G H +PV + TV + RY+ +ELS+ S+ +DVTNA VVAY
Sbjct: 57 ALRQRLTGGL-IHDIPVLPDPTTVEERNRYITVELSNSERESIEVGIDVTNAYVVAYRAG 115
Query: 399 SQSFFLQEDIPD-----LFPNSGERNILPFDSSYTDLERVANVERGNIDLGRTPLADAIS 563
SQS+FL+ D P LFP + +R L FD SY DLER A+ R I LG L AIS
Sbjct: 116 SQSYFLR-DAPASASTYLFPGT-QRYSLRFDGSYGDLERWAHQTREEISLGLQALTHAIS 173
Query: 564 NLE--YHNDIVQIARDLIVVNQMILEAVRF 647
L ND + AR LIV+ QM EA R+
Sbjct: 174 FLRSGASND-EEKARTLIVIIQMASEAARY 202
>gb|ACV85693.1| ricin-like protein 4 [synthetic construct]
Length = 276
Score = 116 bits (291), Expect = 9e-24
Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 12/176 (6%)
Frame = +3
Query: 156 YPTVKFTLDGVTGDSYTQFIEDLRARLKSGEEA-HGVPVTRERATVSDAERYVLMELSDQ 332
YP + FT G T SYT FI+ +R+ L +G++ H +PV R R + +R+VL++LS+Q
Sbjct: 7 YPIINFTTAGATAQSYTNFIDAVRSHLTTGDDVRHEIPVLRNRVGLPINQRFVLVQLSNQ 66
Query: 333 AGNSLPFAVDVTNASVVAYEGKSQSFFLQEDIPD-------LFPNSGERNILPFDSSYTD 491
A +S+ A+DVTNA VV Y + ++F + D P+ LF ++ F +Y
Sbjct: 67 AEHSVTLAMDVTNAYVVGYRAGNNAYFFRPDSPEDAEAITHLFTDAQNPYTFAFGGNYDR 126
Query: 492 LERVANVERGNIDLGRTPLADAISNLEYHN----DIVQIARDLIVVNQMILEAVRF 647
LE++ + R NI+LG PL DAIS L Y++ + +AR IV QMI EAVRF
Sbjct: 127 LEQLGGL-RENIELGNGPLEDAISALYYYSTGRIQLPTVARSFIVCIQMISEAVRF 181