BLASTX nr result

ID: Cinnamomum24_contig00001184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00001184
         (895 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012076821.1| PREDICTED: zinc finger CCCH domain-containin...    67   2e-08
ref|XP_010244375.1| PREDICTED: zinc finger CCCH domain-containin...    64   1e-07
ref|XP_010267090.1| PREDICTED: zinc finger CCCH domain-containin...    60   2e-06

>ref|XP_012076821.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha
           curcas] gi|643724563|gb|KDP33764.1| hypothetical protein
           JCGZ_07335 [Jatropha curcas]
          Length = 387

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
 Frame = -2

Query: 852 IRRPMLSNSVNEVLAXXXXXXXXXXXXXSPPASWAMHQLGS---SPRGMNLRPMFXXXXX 682
           + R + SNS+NE++A               PASW +   GS   SPRG N+R  F     
Sbjct: 256 LSRSVGSNSINEMMASLRNLQLGKVKSL--PASWNVQVGGSGYGSPRGSNIRSGFCSLPT 313

Query: 681 XXXXXXXXXXXXXSGGIGWTDIWEKGCFLXXXXXXXXXXXXXXESGRNLRAKIYEKLSKE 502
                          G+ + D+WE+ C                ESGR+LR K++EKLSKE
Sbjct: 314 TPTSAPTR------SGLCYRDVWERVC-------EEEPPMERVESGRDLRVKMFEKLSKE 360

Query: 501 NSVEIVETNAVVAAGAPDVGW 439
           NS+  V+ + V +A APDVGW
Sbjct: 361 NSLGRVDPDPVQSANAPDVGW 381


>ref|XP_010244375.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Nelumbo
           nucifera]
          Length = 391

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 50/135 (37%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
 Frame = -2

Query: 834 SNSVNEVLAXXXXXXXXXXXXXSPPASWAMHQLGS---SPRGMNLRPMFXXXXXXXXXXX 664
           SN +N+VL                P+SW + Q+GS   SPRG +LRP F           
Sbjct: 269 SNPINDVLTSMRQLQLSKVKSA--PSSWGV-QVGSGFGSPRGSSLRPGFFSLPSTPTRTP 325

Query: 663 XXXXXXXSGGIGWTDIWEKGCFLXXXXXXXXXXXXXXESGRNLRAKIYEKLSKENSVEIV 484
                    G+G+ D WE+G  +               SGR+LRAKIYEKLSKENS++ V
Sbjct: 326 TRC------GLGYFDAWERGTTVEEEPAMERVE-----SGRDLRAKIYEKLSKENSLDRV 374

Query: 483 ETNAVVAAGAPDVGW 439
           E+     + APDVGW
Sbjct: 375 ES----PSPAPDVGW 385


>ref|XP_010267090.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Nelumbo nucifera]
          Length = 387

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 48/141 (34%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
 Frame = -2

Query: 852 IRRPMLSNSVNEVLAXXXXXXXXXXXXXSPPASWAMHQLGS---SPRGMNLRPMFXXXXX 682
           + R + SNS+N+V+                P SW++ Q+GS   SPRG  LRP F     
Sbjct: 259 LSRLLGSNSINDVVTSMRQLQLSKVKSV--PTSWSV-QVGSGFVSPRGSTLRPGFFSLPS 315

Query: 681 XXXXXXXXXXXXXSGGIGWTDIWEKGCFLXXXXXXXXXXXXXXESGRNLRAKIYEKLSKE 502
                          G+G+ D W+ G  +               SGR+LRAKIYEKLSKE
Sbjct: 316 TPTRTPTRC------GLGYLDTWDGGSTVEEEPAMERVE-----SGRDLRAKIYEKLSKE 364

Query: 501 NSVEIVETNAVVAAGAPDVGW 439
           NS++ V++     +  PDVGW
Sbjct: 365 NSLDPVDS----PSPTPDVGW 381


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