BLASTX nr result
ID: Cinnamomum24_contig00001112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00001112
(1048 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826913.1| PREDICTED: THO complex subunit 4D [Amborella... 165 6e-38
ref|XP_012086407.1| PREDICTED: THO complex subunit 4D isoform X1... 164 1e-37
ref|XP_010271270.1| PREDICTED: THO complex subunit 4D [Nelumbo n... 164 1e-37
ref|XP_012086408.1| PREDICTED: THO complex subunit 4D isoform X2... 164 1e-37
ref|XP_008229208.1| PREDICTED: THO complex subunit 4D [Prunus mume] 163 2e-37
ref|XP_007215775.1| hypothetical protein PRUPE_ppa009623mg [Prun... 163 2e-37
ref|XP_012463739.1| PREDICTED: THO complex subunit 4D-like [Goss... 162 5e-37
gb|KHG05753.1| THO complex subunit 4 [Gossypium arboreum] 162 5e-37
ref|XP_007022820.1| RNA-binding family protein, putative isoform... 162 5e-37
ref|XP_007022819.1| RNA-binding family protein, putative isoform... 162 5e-37
ref|XP_002531919.1| RNA and export factor binding protein, putat... 160 2e-36
ref|XP_010932904.1| PREDICTED: THO complex subunit 4D-like [Elae... 157 9e-36
ref|XP_008343050.1| PREDICTED: THO complex subunit 4D-like [Malu... 157 9e-36
ref|XP_004503129.1| PREDICTED: THO complex subunit 4D [Cicer ari... 157 2e-35
ref|XP_003600720.1| THO complex subunit [Medicago truncatula] 156 2e-35
ref|XP_003600719.1| THO complex subunit [Medicago truncatula] gi... 156 2e-35
ref|XP_002276497.1| PREDICTED: THO complex subunit 4D [Vitis vin... 156 3e-35
ref|XP_009334423.1| PREDICTED: THO complex subunit 4D isoform X3... 155 5e-35
ref|XP_009334422.1| PREDICTED: THO complex subunit 4D isoform X2... 155 5e-35
ref|XP_009334420.1| PREDICTED: THO complex subunit 4D isoform X1... 155 5e-35
>ref|XP_006826913.1| PREDICTED: THO complex subunit 4D [Amborella trichopoda]
gi|548831342|gb|ERM94150.1| hypothetical protein
AMTR_s00010p00163740 [Amborella trichopoda]
Length = 269
Score = 165 bits (417), Expect = 6e-38
Identities = 96/174 (55%), Positives = 105/174 (60%), Gaps = 10/174 (5%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLY+SNLDYGVSNEDI+ELFSEIG +KR AVHYDR+GRS GSAEVVFT+RS+A+AAVKRY
Sbjct: 95 KLYISNLDYGVSNEDIRELFSEIGPIKRCAVHYDRSGRSSGSAEVVFTKRSNALAAVKRY 154
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASISHXXX 689
NNVQLDGKPMK+ELIGTN G PVSA VMTPE G G S H
Sbjct: 155 NNVQLDGKPMKIELIGTNLGMPVSARVNVTGGAGRGRRTVVMTPEFGPMPGVVSGGHGTR 214
Query: 688 XXXXXXXXXXXXXXXXXXXXXXXXXVE----------KSADELDKELENYHAGA 557
KSADELDKELE+YHA A
Sbjct: 215 WGRGRGGFRRGGRGGRGRGVGGRGRGRGRGRNQAPPPKSADELDKELESYHANA 268
>ref|XP_012086407.1| PREDICTED: THO complex subunit 4D isoform X1 [Jatropha curcas]
Length = 285
Score = 164 bits (415), Expect = 1e-37
Identities = 93/180 (51%), Positives = 107/180 (59%), Gaps = 13/180 (7%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGVSNEDI+ELFSEIGELKRYAVHYD+NGRS GSAEVV+TRRSDA AA+K+Y
Sbjct: 106 KLYVSNLDYGVSNEDIRELFSEIGELKRYAVHYDQNGRSSGSAEVVYTRRSDAFAALKKY 165
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASIS---- 701
NNV LDGKPMK+E++G P+SA VMTP +G+G G A +
Sbjct: 166 NNVLLDGKPMKIEIVGATTEIPISARVNVTGVNGRRKRTVVMTPGTGRGRGSAPTNRGSG 225
Query: 700 ---------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
EKSADELDK+LE+YHA AM T
Sbjct: 226 QAQVQGQNRRGGFRSGRGGGRGRGRGRGRGGGRGRKQPFEKSADELDKDLESYHAEAMQT 285
>ref|XP_010271270.1| PREDICTED: THO complex subunit 4D [Nelumbo nucifera]
Length = 266
Score = 164 bits (415), Expect = 1e-37
Identities = 97/171 (56%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDIKELFSEIGELKRYA+HYDRNG GSAEVVF RRSDA+AA+KRY
Sbjct: 95 KLYVSNLDYGVTNEDIKELFSEIGELKRYALHYDRNGHPSGSAEVVFLRRSDALAALKRY 154
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSA-XXXXXXXXXXXXXXXVMTPESGQGMGPASISH-- 698
NNV LDGKPMK+E+IGTN PVSA VMTP G+G G + S
Sbjct: 155 NNVILDGKPMKIEIIGTNLELPVSARVNVIGGANGRGKRTVVMTPGVGRGRGSIAGSRGS 214
Query: 697 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
EKSA+ELDKELENYHA AM T
Sbjct: 215 GRWSRRRGAGRGGRGRGRGRGRGRGRKQTTEKSAEELDKELENYHAEAMQT 265
>ref|XP_012086408.1| PREDICTED: THO complex subunit 4D isoform X2 [Jatropha curcas]
gi|643712518|gb|KDP25779.1| hypothetical protein
JCGZ_22501 [Jatropha curcas]
Length = 278
Score = 164 bits (415), Expect = 1e-37
Identities = 93/180 (51%), Positives = 107/180 (59%), Gaps = 13/180 (7%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGVSNEDI+ELFSEIGELKRYAVHYD+NGRS GSAEVV+TRRSDA AA+K+Y
Sbjct: 99 KLYVSNLDYGVSNEDIRELFSEIGELKRYAVHYDQNGRSSGSAEVVYTRRSDAFAALKKY 158
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASIS---- 701
NNV LDGKPMK+E++G P+SA VMTP +G+G G A +
Sbjct: 159 NNVLLDGKPMKIEIVGATTEIPISARVNVTGVNGRRKRTVVMTPGTGRGRGSAPTNRGSG 218
Query: 700 ---------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
EKSADELDK+LE+YHA AM T
Sbjct: 219 QAQVQGQNRRGGFRSGRGGGRGRGRGRGRGGGRGRKQPFEKSADELDKDLESYHAEAMQT 278
>ref|XP_008229208.1| PREDICTED: THO complex subunit 4D [Prunus mume]
Length = 284
Score = 163 bits (412), Expect = 2e-37
Identities = 93/177 (52%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDI+ELFSEIGELKRYAVH+D+NGR GSAEVV+TRRSDA AA+KRY
Sbjct: 108 KLYVSNLDYGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRY 167
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPA------- 710
NNV LDGKPMK+E++G NAG P+SA VMTP G+G G A
Sbjct: 168 NNVLLDGKPMKIEIVGANAGMPISARVNVTGAHGRKKRTVVMTPGPGRGGGYALPMVNRG 227
Query: 709 ---SISHXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
S V+KS DELDKEL++YHA AM +
Sbjct: 228 SGRSSRGGIRNGRGQPRGSGSGRGRGRGGPGRKKPVDKSVDELDKELDSYHADAMQS 284
>ref|XP_007215775.1| hypothetical protein PRUPE_ppa009623mg [Prunus persica]
gi|462411925|gb|EMJ16974.1| hypothetical protein
PRUPE_ppa009623mg [Prunus persica]
Length = 284
Score = 163 bits (412), Expect = 2e-37
Identities = 93/177 (52%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDI+ELFSEIGELKRYAVH+D+NGR GSAEVV+TRRSDA AA+KRY
Sbjct: 108 KLYVSNLDYGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRY 167
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPA------- 710
NNV LDGKPMK+E++G NAG P+SA VMTP G+G G A
Sbjct: 168 NNVLLDGKPMKIEIVGANAGMPISARVNVTGVHGRKKRTVVMTPGPGRGGGYALPMVNRG 227
Query: 709 ---SISHXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
S V+KS DELDKEL++YHA AM +
Sbjct: 228 SGRSSRGGIRNGRGQPRGSGSGRGRGRSGPGRKKPVDKSVDELDKELDSYHADAMQS 284
>ref|XP_012463739.1| PREDICTED: THO complex subunit 4D-like [Gossypium raimondii]
gi|763746663|gb|KJB14102.1| hypothetical protein
B456_002G111400 [Gossypium raimondii]
gi|763746665|gb|KJB14104.1| hypothetical protein
B456_002G111400 [Gossypium raimondii]
Length = 251
Score = 162 bits (409), Expect = 5e-37
Identities = 91/167 (54%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD+GV+NEDI+ELFSEIGELKRY+VHYD+NGRS GSAEVV+ RRSDA AA+KRY
Sbjct: 83 KLYVSNLDHGVTNEDIRELFSEIGELKRYSVHYDKNGRSSGSAEVVYLRRSDAFAALKRY 142
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASISH-XX 692
NNV LDGKPM +E++G NA PVSA VMT +GQ A I+
Sbjct: 143 NNVLLDGKPMIIEIVGANAEVPVSARINVTGTKGRKKRTVVMTSGAGQSRSSAGINRGPN 202
Query: 691 XXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMS 551
+EKSAD+LDKELENYHA AM+
Sbjct: 203 RRGGMTMRSGRGGGRGKGRGRGKRKPMEKSADDLDKELENYHAEAMN 249
>gb|KHG05753.1| THO complex subunit 4 [Gossypium arboreum]
Length = 239
Score = 162 bits (409), Expect = 5e-37
Identities = 91/167 (54%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD+GV+NEDI+ELFSEIGELKRY+VHYD+NGRS GSAEVV+ RRSDA AA+KRY
Sbjct: 71 KLYVSNLDHGVTNEDIRELFSEIGELKRYSVHYDKNGRSSGSAEVVYLRRSDAFAALKRY 130
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASISH-XX 692
NNV LDGKPM +E++G NA PVSA VMT +GQ A I+
Sbjct: 131 NNVLLDGKPMIIEIVGANAEVPVSARINVTGTKGRKKRTVVMTSGAGQSRSSAGINRGPN 190
Query: 691 XXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMS 551
+EKSAD+LDKELENYHA AM+
Sbjct: 191 RRGGMTMRSGRGGGRGRGRGRGKRKPMEKSADDLDKELENYHAEAMN 237
>ref|XP_007022820.1| RNA-binding family protein, putative isoform 2, partial [Theobroma
cacao] gi|508722448|gb|EOY14345.1| RNA-binding family
protein, putative isoform 2, partial [Theobroma cacao]
Length = 219
Score = 162 bits (409), Expect = 5e-37
Identities = 90/166 (54%), Positives = 104/166 (62%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD GV+NEDI+ELFSEIGELKRYAVHYD+NGR GSAEVV+ RRSDA AA+KRY
Sbjct: 53 KLYVSNLDLGVTNEDIRELFSEIGELKRYAVHYDKNGRPSGSAEVVYLRRSDAFAALKRY 112
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASISHXXX 689
NNV LDGKPMK+E++G NA P+SA V+TP GQ A +
Sbjct: 113 NNVLLDGKPMKIEIVGANAEVPISARVNVTGINGRRKRAVVLTPGPGQSRSSAG-PNRSL 171
Query: 688 XXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMS 551
+EKSAD+LDKELENYHA AM+
Sbjct: 172 NRRGGMRSGRSGSRGRGRGRGKKKPIEKSADDLDKELENYHAEAMN 217
>ref|XP_007022819.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
gi|508722447|gb|EOY14344.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 262
Score = 162 bits (409), Expect = 5e-37
Identities = 90/166 (54%), Positives = 104/166 (62%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD GV+NEDI+ELFSEIGELKRYAVHYD+NGR GSAEVV+ RRSDA AA+KRY
Sbjct: 96 KLYVSNLDLGVTNEDIRELFSEIGELKRYAVHYDKNGRPSGSAEVVYLRRSDAFAALKRY 155
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASISHXXX 689
NNV LDGKPMK+E++G NA P+SA V+TP GQ A +
Sbjct: 156 NNVLLDGKPMKIEIVGANAEVPISARVNVTGINGRRKRAVVLTPGPGQSRSSAG-PNRSL 214
Query: 688 XXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMS 551
+EKSAD+LDKELENYHA AM+
Sbjct: 215 NRRGGMRSGRSGSRGRGRGRGKKKPIEKSADDLDKELENYHAEAMN 260
>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 268
Score = 160 bits (404), Expect = 2e-36
Identities = 89/173 (51%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNL+YGVSNEDI+ELF+EIG+LKRYAVHYD+NGRS GSAEVV+TRRS+A AA+K+Y
Sbjct: 96 KLYVSNLEYGVSNEDIRELFAEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKY 155
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASISH--- 698
NNV LDGKPMK+E++G AP+SA VMTP G+G G A +
Sbjct: 156 NNVLLDGKPMKIEIVGVTGEAPISARVNVTGINGRRKRTVVMTPGPGRGRGFAPSNRGAG 215
Query: 697 ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
+EKSADELDKEL+ YHA AM +
Sbjct: 216 QRSRGGLRNLGRGRGRGRGRGGHGGRGKKQPLEKSADELDKELDTYHAEAMQS 268
>ref|XP_010932904.1| PREDICTED: THO complex subunit 4D-like [Elaeis guineensis]
Length = 270
Score = 157 bits (398), Expect = 9e-36
Identities = 93/178 (52%), Positives = 105/178 (58%), Gaps = 11/178 (6%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLY+SNLDYGVSNED+KELFSE+GELKR AVHYDRNGR GSAEVVFTRRSDA+AA+KRY
Sbjct: 92 KLYISNLDYGVSNEDMKELFSEVGELKRCAVHYDRNGRPTGSAEVVFTRRSDALAALKRY 151
Query: 868 NNVQLDGKPMKVELIGTNAGAPVS-AXXXXXXXXXXXXXXXVMTPESG----------QG 722
NNVQLDGK MK+E+IGTN G P++ VMTP +G G
Sbjct: 152 NNVQLDGKAMKIEVIGTNLGLPITPRVNVVGGATGRQKRTVVMTPGAGLGSSGSFNRTSG 211
Query: 721 MGPASISHXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
VEKSADELDKEL+ YHA AM+T
Sbjct: 212 WNRGGFHQGIRGHGRGRGRGRGRGRGRGRGRGKKQIVEKSADELDKELDAYHAEAMNT 269
>ref|XP_008343050.1| PREDICTED: THO complex subunit 4D-like [Malus domestica]
Length = 300
Score = 157 bits (398), Expect = 9e-36
Identities = 92/179 (51%), Positives = 106/179 (59%), Gaps = 14/179 (7%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDI+ELFSEIGELKRYAVH+D+NGR GSAEVV+TRRSDA AA+KRY
Sbjct: 120 KLYVSNLDYGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRY 179
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQ---------GMG 716
NNV LDGKPMK+E++G NAG P+SA VMTP G G
Sbjct: 180 NNVLLDGKPMKIEIVGANAGMPISARVNVTGMHGRKKRTVVMTPGPGNAGGYAMPMVNRG 239
Query: 715 PASIS-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAM 554
P+ S + VEKS DELDKEL++YHA M
Sbjct: 240 PSRSSRGGNRNGRGKPRGNGSGSGRGRGRGRGGEGRKKPVEKSVDELDKELDSYHADNM 298
>ref|XP_004503129.1| PREDICTED: THO complex subunit 4D [Cicer arietinum]
Length = 295
Score = 157 bits (396), Expect = 2e-35
Identities = 89/182 (48%), Positives = 106/182 (58%), Gaps = 16/182 (8%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD GV+NEDI+ELFSE+G+LKRYAVHYD+NG GSAEVV+ RRSDA AA+KRY
Sbjct: 112 KLYVSNLDRGVTNEDIRELFSELGDLKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRY 171
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQGMGPASIS---- 701
NNV LDGKPMK+E++GTN+ P++A VMTP GQ GPA ++
Sbjct: 172 NNVLLDGKPMKIEIVGTNSELPITARVNVTGINGQRKRTVVMTPRGGQAGGPAMLNRGSG 231
Query: 700 ------------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGA 557
VEKSA+ELDKELE YHA A
Sbjct: 232 WGRHAGSRIGSGRGRGRGRVARGGGRGLGRGGGRGRGRKDAVEKSAEELDKELETYHAEA 291
Query: 556 MS 551
M+
Sbjct: 292 MN 293
>ref|XP_003600720.1| THO complex subunit [Medicago truncatula]
Length = 218
Score = 156 bits (395), Expect = 2e-35
Identities = 91/182 (50%), Positives = 107/182 (58%), Gaps = 15/182 (8%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD GV+NEDI+ELFSE+GELKRYAVHYD+NG GSAEVV+ RRSDA AA+KRY
Sbjct: 37 KLYVSNLDRGVTNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRY 96
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSA-----XXXXXXXXXXXXXXXVMTPESGQGMGPASI 704
NNV LDGKPMK+E++GTN+ PV+A VMTP G+G GPA +
Sbjct: 97 NNVLLDGKPMKIEIVGTNSALPVTARVNVSSMNVSAMNGQRKRTVVMTPRGGRGGGPAML 156
Query: 703 SH----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAM 554
+ VEKSA++LDKELE YHA AM
Sbjct: 157 NRGAGWGRRGGSRGGSGSMRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYHAEAM 216
Query: 553 ST 548
T
Sbjct: 217 QT 218
>ref|XP_003600719.1| THO complex subunit [Medicago truncatula] gi|355489767|gb|AES70970.1|
RNA recognition motif [Medicago truncatula]
Length = 291
Score = 156 bits (395), Expect = 2e-35
Identities = 91/182 (50%), Positives = 107/182 (58%), Gaps = 15/182 (8%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLD GV+NEDI+ELFSE+GELKRYAVHYD+NG GSAEVV+ RRSDA AA+KRY
Sbjct: 110 KLYVSNLDRGVTNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRY 169
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSA-----XXXXXXXXXXXXXXXVMTPESGQGMGPASI 704
NNV LDGKPMK+E++GTN+ PV+A VMTP G+G GPA +
Sbjct: 170 NNVLLDGKPMKIEIVGTNSALPVTARVNVSSMNVSAMNGQRKRTVVMTPRGGRGGGPAML 229
Query: 703 SH----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAM 554
+ VEKSA++LDKELE YHA AM
Sbjct: 230 NRGAGWGRRGGSRGGSGSMRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYHAEAM 289
Query: 553 ST 548
T
Sbjct: 290 QT 291
>ref|XP_002276497.1| PREDICTED: THO complex subunit 4D [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product
[Vitis vinifera]
Length = 269
Score = 156 bits (394), Expect = 3e-35
Identities = 91/173 (52%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLY+SNLDYGV+NEDI+ELFSEIG++KRYAVHY++NGR GSAEVV+TRRSDA AAVKRY
Sbjct: 97 KLYISNLDYGVTNEDIRELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRY 156
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSA-XXXXXXXXXXXXXXXVMTPESGQGMGPASIS--- 701
NNV LDGKPMK+E+IG+++ PVSA VMTP G G +I+
Sbjct: 157 NNVLLDGKPMKIEIIGSDSDMPVSARVNVIGGVNGKRRRTVVMTPGVGHARGSTAINRSS 216
Query: 700 --HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAMST 548
VEKSA ELDKEL+NYHA AM T
Sbjct: 217 SRRGRGGLSNGRGRGRAGSRGRGRGRGRKQPVEKSAVELDKELDNYHAEAMHT 269
>ref|XP_009334423.1| PREDICTED: THO complex subunit 4D isoform X3 [Pyrus x bretschneideri]
Length = 300
Score = 155 bits (392), Expect = 5e-35
Identities = 91/179 (50%), Positives = 105/179 (58%), Gaps = 14/179 (7%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDI+ELFSEIGELKRYAVH+D+NGR GSAEVV+TRRSDA AA+KRY
Sbjct: 120 KLYVSNLDYGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRY 179
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQ---------GMG 716
NNV LDGKPMK+E++G AG P+SA VMTP G G
Sbjct: 180 NNVLLDGKPMKIEIVGATAGMPISARVNVTGMHGRKKRTVVMTPGPGNAGGYAMPMVNHG 239
Query: 715 PASIS-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAM 554
P+ S + VEKS DELDKEL++YHA M
Sbjct: 240 PSKSSRGGNRNGRGKPRGSGNGSGRGRGRGRGGEGRKKPVEKSVDELDKELDSYHADNM 298
>ref|XP_009334422.1| PREDICTED: THO complex subunit 4D isoform X2 [Pyrus x bretschneideri]
Length = 303
Score = 155 bits (392), Expect = 5e-35
Identities = 91/179 (50%), Positives = 105/179 (58%), Gaps = 14/179 (7%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDI+ELFSEIGELKRYAVH+D+NGR GSAEVV+TRRSDA AA+KRY
Sbjct: 120 KLYVSNLDYGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRY 179
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQ---------GMG 716
NNV LDGKPMK+E++G AG P+SA VMTP G G
Sbjct: 180 NNVLLDGKPMKIEIVGATAGMPISARVNVTGMHGRKKRTVVMTPGPGNAGGYAMPMVNHG 239
Query: 715 PASIS-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAM 554
P+ S + VEKS DELDKEL++YHA M
Sbjct: 240 PSKSSRGGNRNGRGKPRGSGNGSGRGRGRGRGGEGRKKPVEKSVDELDKELDSYHADNM 298
>ref|XP_009334420.1| PREDICTED: THO complex subunit 4D isoform X1 [Pyrus x bretschneideri]
Length = 360
Score = 155 bits (392), Expect = 5e-35
Identities = 91/179 (50%), Positives = 105/179 (58%), Gaps = 14/179 (7%)
Frame = -1
Query: 1048 KLYVSNLDYGVSNEDIKELFSEIGELKRYAVHYDRNGRSIGSAEVVFTRRSDAIAAVKRY 869
KLYVSNLDYGV+NEDI+ELFSEIGELKRYAVH+D+NGR GSAEVV+TRRSDA AA+KRY
Sbjct: 120 KLYVSNLDYGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRY 179
Query: 868 NNVQLDGKPMKVELIGTNAGAPVSAXXXXXXXXXXXXXXXVMTPESGQ---------GMG 716
NNV LDGKPMK+E++G AG P+SA VMTP G G
Sbjct: 180 NNVLLDGKPMKIEIVGATAGMPISARVNVTGMHGRKKRTVVMTPGPGNAGGYAMPMVNHG 239
Query: 715 PASIS-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKSADELDKELENYHAGAM 554
P+ S + VEKS DELDKEL++YHA M
Sbjct: 240 PSKSSRGGNRNGRGKPRGSGNGSGRGRGRGRGGEGRKKPVEKSVDELDKELDSYHADNM 298