BLASTX nr result
ID: Cinnamomum24_contig00000321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00000321
(1309 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010940712.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 333 1e-88
ref|XP_008789424.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 327 2e-86
ref|XP_010264869.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 325 4e-86
ref|XP_010650156.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 318 6e-84
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 315 4e-83
ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]... 315 6e-83
ref|XP_010069100.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 313 2e-82
ref|XP_012077603.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 311 5e-82
ref|XP_011091341.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 311 7e-82
emb|CDO99317.1| unnamed protein product [Coffea canephora] 311 9e-82
ref|XP_009401203.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 309 3e-81
ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 309 3e-81
ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citr... 309 3e-81
ref|XP_011029743.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 307 1e-80
ref|XP_010940713.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 307 1e-80
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 305 4e-80
ref|XP_004296531.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 305 5e-80
gb|KHG08630.1| 28 kDa ribonucleoprotein, chloroplastic [Gossypiu... 305 7e-80
ref|XP_010549094.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 304 9e-80
ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus ... 303 2e-79
>ref|XP_010940712.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X1 [Elaeis
guineensis]
Length = 282
Score = 333 bits (855), Expect = 1e-88
Identities = 180/288 (62%), Positives = 210/288 (72%), Gaps = 4/288 (1%)
Frame = -3
Query: 1208 AMAAVGSCFTAACIR--SKHISSSDNVFRLSCLRAL--PVVTTVAYTPHLDSLSISIALP 1041
A AAVGS F+ A S + SSD V R++C R L P +T +A + SI +A
Sbjct: 3 ATAAVGSYFSTAATPQLSSKLVSSDVVLRVTCARPLRMPTITNLA-----EHFSIPVAFQ 57
Query: 1040 KRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKLYF 861
K RL +I ++V Q + V + NTKLYF
Sbjct: 58 KWRLLRISAAVAQEEATAA---VQEEEEEEEEEKETMEESGKGEEVVVAAPAQQNTKLYF 114
Query: 860 GNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLDGS 681
GNLPY+CDSAQLAGIIQ+Y +PE+VEVLYDR+TGRSRGFAFVTMSSIEDC AVI+NLDGS
Sbjct: 115 GNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMSSIEDCEAVIQNLDGS 174
Query: 680 EYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARVLY 501
+Y GRT+RVNFSDKPKPKEPLYPE++YKLFVGNLSWSVTSE LT+AFQEYGNVVGARVLY
Sbjct: 175 QYSGRTMRVNFSDKPKPKEPLYPESDYKLFVGNLSWSVTSENLTQAFQEYGNVVGARVLY 234
Query: 500 DGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
DGDTGRSRGYGFVCYST++EMDAA++ LNG ELEGR MRVS+ALGK+S
Sbjct: 235 DGDTGRSRGYGFVCYSTKEEMDAALQYLNGAELEGRAMRVSLALGKKS 282
>ref|XP_008789424.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Phoenix
dactylifera]
Length = 281
Score = 327 bits (837), Expect = 2e-86
Identities = 177/289 (61%), Positives = 208/289 (71%), Gaps = 5/289 (1%)
Frame = -3
Query: 1208 AMAAVGSCFTAACIR--SKHISSSDNVFRLSCLRA--LPVVTTVAYTPHLDSLSISIALP 1041
A AAVGS F+ A S + SSD V RL+C R +P +T +A + S +A
Sbjct: 3 ATAAVGSYFSTAATPQLSSKLVSSDAVLRLTCARPSRMPTITILA-----EHFSTPVATS 57
Query: 1040 KR-RLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKLY 864
++ RL +I ++V E +++ NTKLY
Sbjct: 58 QKWRLLRISAAVAQEEATAEVQEEEAEEEKETMEEGGKEEEVVVATPAPQ-----NTKLY 112
Query: 863 FGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLDG 684
FGNLPYNCDSAQLAGIIQ Y +PEMVEVLYDR+TGRSRGFAFVTMSS+EDC AVI+NLDG
Sbjct: 113 FGNLPYNCDSAQLAGIIQQYANPEMVEVLYDRDTGRSRGFAFVTMSSVEDCEAVIQNLDG 172
Query: 683 SEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARVL 504
S+Y GRTLRVNFSDKPKPKEPLYPET+YKLFVGNLSWSVTSE LT+ FQ+YGNVVGARVL
Sbjct: 173 SQYSGRTLRVNFSDKPKPKEPLYPETDYKLFVGNLSWSVTSESLTQVFQDYGNVVGARVL 232
Query: 503 YDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
YDGD+GRSRGYGFVCYST++EMDAA++ LNG ELEGR MRVS+ALGK+S
Sbjct: 233 YDGDSGRSRGYGFVCYSTKEEMDAALQYLNGAELEGRAMRVSLALGKKS 281
>ref|XP_010264869.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nelumbo nucifera]
Length = 291
Score = 325 bits (834), Expect = 4e-86
Identities = 179/293 (61%), Positives = 209/293 (71%), Gaps = 7/293 (2%)
Frame = -3
Query: 1214 STAMAAVGSCFTAA-----CIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISI 1050
+ A A VGSCF+ A CIRSK+ +SSD ++S R L V ++++ DSLSI
Sbjct: 3 AAAAATVGSCFSTATAATSCIRSKY-ASSDFALKISLTRTLQVAP-ISHSLTTDSLSIGA 60
Query: 1049 ALP--KRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLN 876
K R+S+I +SV V N
Sbjct: 61 ISQSQKWRISRISASVAQEEAAAAIQTAPETVEEEGDEKGEEQVEQVSTEGEATDPV--N 118
Query: 875 TKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIE 696
TKLYFGNLPY+CDSAQLAGIIQ YGSPEMVEVLY+R+TG+SRGF FVTMS+IED N VIE
Sbjct: 119 TKLYFGNLPYSCDSAQLAGIIQQYGSPEMVEVLYNRDTGKSRGFGFVTMSNIEDANRVIE 178
Query: 695 NLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVG 516
NLDGSEY GRTLRVNFSDKP+P+E LYPE+EYKLFVGNLSWSVTSE LT+ FQEYGNVVG
Sbjct: 179 NLDGSEYCGRTLRVNFSDKPRPRESLYPESEYKLFVGNLSWSVTSESLTKVFQEYGNVVG 238
Query: 515 ARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
ARVLYDG+TGRSRGYGFVCYS++ EM+AA+E+LNGVELEGRTMR+S+A GKRS
Sbjct: 239 ARVLYDGETGRSRGYGFVCYSSEPEMEAALEHLNGVELEGRTMRISLAQGKRS 291
>ref|XP_010650156.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296083731|emb|CBI23720.3| unnamed protein product
[Vitis vinifera]
Length = 283
Score = 318 bits (815), Expect = 6e-84
Identities = 150/175 (85%), Positives = 167/175 (95%)
Frame = -3
Query: 881 LNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAV 702
+NTKLYFGNLPY+CDSAQLAGIIQ+YGSPE+VEVLY+R+TGRSRGFAFVTMSS+EDCNAV
Sbjct: 109 VNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAV 168
Query: 701 IENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNV 522
IENLDGSEYGGRTLRVNFSDKPKPK PLYPETEYKLFVGNLSWSVTSE L + FQEYGNV
Sbjct: 169 IENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNV 228
Query: 521 VGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
+GARVLYDG+TGRSRGYGFVCYST+ EMD A+E+LNGVELEGR +R+S+A G+RS
Sbjct: 229 IGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 315 bits (808), Expect = 4e-83
Identities = 168/291 (57%), Positives = 205/291 (70%), Gaps = 5/291 (1%)
Frame = -3
Query: 1214 STAMAAVGSCF-----TAACIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISI 1050
+TA AA+ S F T C SKH+ S D++ RL + + + + ++ LS +
Sbjct: 3 ATAAAAISSSFSPSIHTLKCTNSKHLPS-DSLLRLPSAHRVALASIYHRSYAIEPLS-QV 60
Query: 1049 ALPKRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTK 870
A+ R ++++ S+ + D +NTK
Sbjct: 61 AVSWRSVARLVSAAVAQEEAAVTAPVEEDEQQQVAEEGEAEPEAEPEAAP------INTK 114
Query: 869 LYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENL 690
LYFGNLPYN DSAQLAGIIQDYG+PE+VEVLYDR+TGRSRGFAFVTMS++EDCNAVIENL
Sbjct: 115 LYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENL 174
Query: 689 DGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGAR 510
DGS++ GR LRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE L EAFQEYGN+VGAR
Sbjct: 175 DGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGAR 234
Query: 509 VLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
VLYDG+TGRSRGYGFVCY+T+ EM+ A+ +LNGVELEGR MRVS+A GK+S
Sbjct: 235 VLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285
>ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]
gi|508714294|gb|EOY06191.1| RNA-binding family protein
[Theobroma cacao]
Length = 293
Score = 315 bits (806), Expect = 6e-83
Identities = 170/293 (58%), Positives = 208/293 (70%), Gaps = 7/293 (2%)
Frame = -3
Query: 1214 STAMAAVGSCF-----TAACIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISI 1050
+TA AAVGS F T C+R K +++ +V R R + ++ +T L S ++
Sbjct: 3 ATAAAAVGSSFSPSIQTLKCMRFKQLTADHSVLRFPSSRTISSISHSFFTHELFLTSGTV 62
Query: 1049 ALPKRRLSKIYSSVXXXXXXXXXXETQS--DXXXXXXXXXXXXXXXXXXXXXVNSDVGLN 876
K R+ K+ ++V E +S + ++ +N
Sbjct: 63 Q--KWRVLKVSAAVAQQEAAATAQEEESLAEEEVKEGEVAAEGETEAQAETAAEAESPVN 120
Query: 875 TKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIE 696
TKLYFGNLPYN DSAQLAGIIQ+YGSPE+VEVLYDR TG+SRGFAFVTMS++EDCN VIE
Sbjct: 121 TKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIE 180
Query: 695 NLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVG 516
NLDGSEY GRTLRVNFSDKP+P+EPLYPETE+KLFVGNLSWSVTSE LT+AFQEYG VVG
Sbjct: 181 NLDGSEYLGRTLRVNFSDKPRPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVG 240
Query: 515 ARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
ARVLYDG+TGRSRGYGFV YST+ EM+AA+++LNGVELEGR +RVS A G+RS
Sbjct: 241 ARVLYDGETGRSRGYGFVSYSTKSEMEAALQSLNGVELEGRAIRVSQAQGRRS 293
>ref|XP_010069100.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Eucalyptus
grandis] gi|629091336|gb|KCW57331.1| hypothetical
protein EUGRSUZ_H00128 [Eucalyptus grandis]
Length = 287
Score = 313 bits (802), Expect = 2e-82
Identities = 154/177 (87%), Positives = 166/177 (93%)
Frame = -3
Query: 887 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 708
V +NTKLYFGNLPYN DSAQLAGIIQDYGSPE+VEVLYDR+TGRSRGFAFVTMSSIEDCN
Sbjct: 111 VTVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRDTGRSRGFAFVTMSSIEDCN 170
Query: 707 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 528
AVIENL GSEY GRTLRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE L +AFQEYG
Sbjct: 171 AVIENLAGSEYMGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLAKAFQEYG 230
Query: 527 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
NVVGARVLYDG+TGRSRGYGFV YST+ EM+ A+E+LNGVELEGR MRVS+A GKR+
Sbjct: 231 NVVGARVLYDGETGRSRGYGFVSYSTKAEMETAIESLNGVELEGRAMRVSLAEGKRT 287
>ref|XP_012077603.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha
curcas] gi|643724021|gb|KDP33321.1| hypothetical protein
JCGZ_12870 [Jatropha curcas]
Length = 306
Score = 311 bits (798), Expect = 5e-82
Identities = 149/179 (83%), Positives = 167/179 (93%)
Frame = -3
Query: 893 SDVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIED 714
+++ LNTKLYFGNLPYN DSAQLAGIIQ+YG+PE+VEVLYDR+TGRSRGFAFVTMSS+ED
Sbjct: 128 AEIPLNTKLYFGNLPYNVDSAQLAGIIQEYGAPELVEVLYDRDTGRSRGFAFVTMSSVED 187
Query: 713 CNAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQE 534
CN VIENLDGS+Y GR LRVNF+DKPKPKEPLYPETE+KLFVGNLSWSVTSE LT AFQE
Sbjct: 188 CNRVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLTRAFQE 247
Query: 533 YGNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
YG VVGARVLYDG+TGRSRGYGFVCYST+ EM+ A+E+LNGVELEGR MRVS+A GK+S
Sbjct: 248 YGTVVGARVLYDGETGRSRGYGFVCYSTRSEMENAIESLNGVELEGRAMRVSLAQGKKS 306
>ref|XP_011091341.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Sesamum
indicum]
Length = 283
Score = 311 bits (797), Expect = 7e-82
Identities = 172/290 (59%), Positives = 203/290 (70%), Gaps = 7/290 (2%)
Frame = -3
Query: 1208 AMAAVGSCFTAACIRSKHISS----SDNVFRLSCLRAL---PVVTTVAYTPHLDSLSISI 1050
A AAV S F+ + K +SS SD++ ++SC R L PV ++ + + ++ S
Sbjct: 3 ATAAVPSSFSTSIKSFKCVSSKNWPSDHLLKISCPRTLQSAPVSHSLVF--EFNPITSS- 59
Query: 1049 ALPKRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTK 870
A RLS++ ++V + +NTK
Sbjct: 60 ACKSWRLSRVSAAVAQEEAAALTAPVEEPPEAEEEVTSGVGGAATESGE-------VNTK 112
Query: 869 LYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENL 690
LYFGNLPY CDSAQLAGIIQ+Y SPE+VEVLYDRNTG+SRGFAFVTMSSIE+C VI+NL
Sbjct: 113 LYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSIEECKTVIQNL 172
Query: 689 DGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGAR 510
DGSEYGGRTLRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE LTEAFQEYGNVVGAR
Sbjct: 173 DGSEYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSENLTEAFQEYGNVVGAR 232
Query: 509 VLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 360
VLYDG+TGRSRGYGFVCY T+ EM+ A+E LNGVEL GR MRVS+A GK+
Sbjct: 233 VLYDGETGRSRGYGFVCYETKAEMETALEALNGVELGGRAMRVSLAQGKK 282
>emb|CDO99317.1| unnamed protein product [Coffea canephora]
Length = 293
Score = 311 bits (796), Expect = 9e-82
Identities = 174/292 (59%), Positives = 200/292 (68%), Gaps = 7/292 (2%)
Frame = -3
Query: 1214 STAMAAVGSCFTAA-----CIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISI 1050
+TA AAV S FTA+ CIR K+ D ++ R L V + S+ I
Sbjct: 3 ATAAAAVTSSFTASMQSLNCIRFKNWPC-DPALKVVSSRMLQVASISHSLGIESSILIGP 61
Query: 1049 ALPKRRLSKIYSSVXXXXXXXXXXE--TQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLN 876
K R S+I ++V E T S+ S +N
Sbjct: 62 LSNKWRASRIAAAVAQEEAAVLAPEEATASEQVEEVIQEEKEVEEVSSEAEVAQSS-SVN 120
Query: 875 TKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIE 696
TKLYFGNLPYN DSAQLAGIIQDY SPE++EVLYDR TG+SRGFAFVTMS++EDCN VI+
Sbjct: 121 TKLYFGNLPYNVDSAQLAGIIQDYASPELIEVLYDRETGKSRGFAFVTMSTVEDCNVVIQ 180
Query: 695 NLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVG 516
NLDG EYGGRT RVNFSDKP+PKEPLYPETE+KLFVGNL+WSVTSE LTEAFQEYGNVVG
Sbjct: 181 NLDGREYGGRTFRVNFSDKPRPKEPLYPETEHKLFVGNLAWSVTSESLTEAFQEYGNVVG 240
Query: 515 ARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 360
RVLYDGDTGRSRGYGFVCY T+ EMDAA+ +LNGVELEGR MRVS+A GK+
Sbjct: 241 GRVLYDGDTGRSRGYGFVCYETRAEMDAALNSLNGVELEGRPMRVSLAQGKK 292
>ref|XP_009401203.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Musa acuminata
subsp. malaccensis]
Length = 271
Score = 309 bits (792), Expect = 3e-81
Identities = 145/174 (83%), Positives = 164/174 (94%)
Frame = -3
Query: 878 NTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVI 699
NTKLYFGNLPYNCDSAQLAGIIQ++ +PE+VEVLYDR TGRSRGFAFVTMS++EDC VI
Sbjct: 98 NTKLYFGNLPYNCDSAQLAGIIQEFANPELVEVLYDRETGRSRGFAFVTMSTVEDCEEVI 157
Query: 698 ENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVV 519
+NLDGS+YGGRTLRVNFSDKPK KEPLYPE+++KLFVGNLSWSVT+E LT+ FQE+GNVV
Sbjct: 158 KNLDGSQYGGRTLRVNFSDKPKAKEPLYPESQHKLFVGNLSWSVTTESLTQVFQEHGNVV 217
Query: 518 GARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
GARVLYDGDTGRSRGYGFVCYST++EMD AME LNGVELEGR MR+S+ALGK+S
Sbjct: 218 GARVLYDGDTGRSRGYGFVCYSTKEEMDNAMETLNGVELEGREMRISLALGKKS 271
>ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 309
Score = 309 bits (792), Expect = 3e-81
Identities = 148/177 (83%), Positives = 165/177 (93%)
Frame = -3
Query: 887 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 708
+G+NTKLYFGNLPYN DSAQLAGIIQDYGSPE+VEVLYDR TGRSRGFAFVTMS++EDCN
Sbjct: 133 LGVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRGFAFVTMSTVEDCN 192
Query: 707 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 528
AVIENLDG EY GR LRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E LT+AFQEYG
Sbjct: 193 AVIENLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 252
Query: 527 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
NVVGARVLYDG++GRSRGYGFVCYST+ EM+ A+E+LNGVELEGR MRVS+A G+RS
Sbjct: 253 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 309
>ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citrus clementina]
gi|557522218|gb|ESR33585.1| hypothetical protein
CICLE_v10005487mg [Citrus clementina]
Length = 309
Score = 309 bits (792), Expect = 3e-81
Identities = 148/177 (83%), Positives = 165/177 (93%)
Frame = -3
Query: 887 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 708
+G+NTKLYFGNLPYN DSAQLAGIIQDYGSPE+VEVLYDR TGRSRGFAFVTMS++EDCN
Sbjct: 133 LGVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRGFAFVTMSTVEDCN 192
Query: 707 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 528
AVIENLDG EY GR LRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E LT+AFQEYG
Sbjct: 193 AVIENLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 252
Query: 527 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
NVVGARVLYDG++GRSRGYGFVCYST+ EM+ A+E+LNGVELEGR MRVS+A G+RS
Sbjct: 253 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 309
>ref|XP_011029743.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Populus
euphratica]
Length = 279
Score = 307 bits (786), Expect = 1e-80
Identities = 146/177 (82%), Positives = 165/177 (93%)
Frame = -3
Query: 887 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 708
V +NTKLYFGNLPYN DSAQLAG+IQ YGSPEMVEVLY R TG+SRGFAFVTMSSIEDC
Sbjct: 103 VPVNTKLYFGNLPYNVDSAQLAGMIQKYGSPEMVEVLYHRETGKSRGFAFVTMSSIEDCE 162
Query: 707 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 528
AVIENLDGS+Y GR LRVNF+DKPKPKEPLYPETEYKLF+GNLSWSVTSE LT+AFQEYG
Sbjct: 163 AVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYG 222
Query: 527 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
NVVGARVLYDG+TG+SRGYGFVCYST++EM+ A+++LNGVELEGR +RVS+A G++S
Sbjct: 223 NVVGARVLYDGETGKSRGYGFVCYSTKEEMETALQSLNGVELEGRALRVSLAEGRKS 279
>ref|XP_010940713.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X2 [Elaeis
guineensis]
Length = 269
Score = 307 bits (786), Expect = 1e-80
Identities = 166/270 (61%), Positives = 194/270 (71%), Gaps = 4/270 (1%)
Frame = -3
Query: 1208 AMAAVGSCFTAACIR--SKHISSSDNVFRLSCLRAL--PVVTTVAYTPHLDSLSISIALP 1041
A AAVGS F+ A S + SSD V R++C R L P +T +A + SI +A
Sbjct: 3 ATAAVGSYFSTAATPQLSSKLVSSDVVLRVTCARPLRMPTITNLA-----EHFSIPVAFQ 57
Query: 1040 KRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKLYF 861
K RL +I ++V Q + V + NTKLYF
Sbjct: 58 KWRLLRISAAVAQEEATAA---VQEEEEEEEEEKETMEESGKGEEVVVAAPAQQNTKLYF 114
Query: 860 GNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLDGS 681
GNLPY+CDSAQLAGIIQ+Y +PE+VEVLYDR+TGRSRGFAFVTMSSIEDC AVI+NLDGS
Sbjct: 115 GNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMSSIEDCEAVIQNLDGS 174
Query: 680 EYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARVLY 501
+Y GRT+RVNFSDKPKPKEPLYPE++YKLFVGNLSWSVTSE LT+AFQEYGNVVGARVLY
Sbjct: 175 QYSGRTMRVNFSDKPKPKEPLYPESDYKLFVGNLSWSVTSENLTQAFQEYGNVVGARVLY 234
Query: 500 DGDTGRSRGYGFVCYSTQQEMDAAMENLNG 411
DGDTGRSRGYGFVCYST++EMDAA++ LNG
Sbjct: 235 DGDTGRSRGYGFVCYSTKEEMDAALQYLNG 264
Score = 72.0 bits (175), Expect = 9e-10
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = -3
Query: 599 KLFVGNLSWSVTSEGLTEAFQEYGNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMEN 420
KL+ GNL +S S L QEY N VLYD DTGRSRG+ FV S+ ++ +A ++N
Sbjct: 111 KLYFGNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMSSIEDCEAVIQN 170
Query: 419 LNGVELEGRTMRVS 378
L+G + GRTMRV+
Sbjct: 171 LDGSQYSGRTMRVN 184
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 305 bits (782), Expect = 4e-80
Identities = 144/177 (81%), Positives = 165/177 (93%)
Frame = -3
Query: 887 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 708
V +NTKLYFGNLPYN DSAQLAG+IQ+YG+PEMVEVLY R TGRSRGFAFVTMSSIEDC
Sbjct: 103 VPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCE 162
Query: 707 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 528
VIENLDGS+Y GR LRVNF+DKPKPKEPLYPETEYKLF+GNLSWSVTSE LT+AFQEYG
Sbjct: 163 TVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYG 222
Query: 527 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
NVVGARVLYDG+TG+SRGYGFVCYST++E++ A+++LNGVELEGR +RVS+A G++S
Sbjct: 223 NVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLAEGRKS 279
>ref|XP_004296531.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 297
Score = 305 bits (781), Expect = 5e-80
Identities = 145/178 (81%), Positives = 165/178 (92%)
Frame = -3
Query: 890 DVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDC 711
++ +NTKLYFGNLPY+ DSAQLAGIIQDY SPE++EVLY R+TG+SRGFAFVTMSS+EDC
Sbjct: 120 ELPVNTKLYFGNLPYSVDSAQLAGIIQDYASPELIEVLYHRDTGKSRGFAFVTMSSVEDC 179
Query: 710 NAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEY 531
NAVIENLDG EY GRTLRVNFSDKP+ KEPLYPETEYKLFVGNLSWS TSE LT+AFQEY
Sbjct: 180 NAVIENLDGREYSGRTLRVNFSDKPRAKEPLYPETEYKLFVGNLSWSATSESLTKAFQEY 239
Query: 530 GNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
GNVVGARVLYDG+TGRSRGYGFVC+ST+ EM+ A+++L+GVELEGR MRVS+A GKRS
Sbjct: 240 GNVVGARVLYDGETGRSRGYGFVCFSTKAEMETALQSLDGVELEGRAMRVSLAEGKRS 297
>gb|KHG08630.1| 28 kDa ribonucleoprotein, chloroplastic [Gossypium arboreum]
Length = 292
Score = 305 bits (780), Expect = 7e-80
Identities = 145/174 (83%), Positives = 165/174 (94%)
Frame = -3
Query: 881 LNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAV 702
+NTKLYFGNLPYN DSAQLAGIIQ+YGSPE+VEVLY+R TG+SRGFAFVTMS+IEDCN +
Sbjct: 118 VNTKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYNRETGKSRGFAFVTMSTIEDCNTI 177
Query: 701 IENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNV 522
I+NLDGSEY GRTLRVNFSDKP+P+EPLYPETEYKLFVGNLSWSVTSE LT+AFQEYGNV
Sbjct: 178 IQNLDGSEYLGRTLRVNFSDKPRPREPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNV 237
Query: 521 VGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 360
VGARVLYDG+TGRSRGYGFV YST+ EM+AA+++LNGVELEGR +RVS+A G+R
Sbjct: 238 VGARVLYDGETGRSRGYGFVSYSTKSEMEAAIQSLNGVELEGRALRVSLAQGRR 291
Score = 66.6 bits (161), Expect = 4e-08
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 872 KLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIEN 693
KL+ GNL ++ S L Q+YG+ VLYD TGRSRG+ FV+ S+ + A I++
Sbjct: 212 KLFVGNLSWSVTSEILTQAFQEYGNVVGARVLYDGETGRSRGYGFVSYSTKSEMEAAIQS 271
Query: 692 LDGSEYGGRTLRVNFSDKPKP 630
L+G E GR LRV+ + +P
Sbjct: 272 LNGVELEGRALRVSLAQGRRP 292
>ref|XP_010549094.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Tarenaya
hassleriana]
Length = 253
Score = 304 bits (779), Expect = 9e-80
Identities = 144/177 (81%), Positives = 165/177 (93%)
Frame = -3
Query: 890 DVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDC 711
D G+NTKLYFGNLPY+ DSA LAG+IQD+ +PE+VEVLY+R TGRSRGFAFVTMSS++DC
Sbjct: 76 DGGVNTKLYFGNLPYSVDSATLAGLIQDFANPELVEVLYNRETGRSRGFAFVTMSSVDDC 135
Query: 710 NAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEY 531
NAV+ENLDGSEY GRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSE L +AFQ +
Sbjct: 136 NAVVENLDGSEYMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESLAQAFQGH 195
Query: 530 GNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 360
GNVVGARVLYDG+TG+SRGYGFVCYS+Q EM+AA+++LNGVELEGR MRVS+A GK+
Sbjct: 196 GNVVGARVLYDGETGKSRGYGFVCYSSQAEMEAALQSLNGVELEGREMRVSLAQGKK 252
>ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| RNA-binding protein RNP1
precursor [Populus trichocarpa]
Length = 279
Score = 303 bits (776), Expect = 2e-79
Identities = 146/179 (81%), Positives = 163/179 (91%)
Frame = -3
Query: 893 SDVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIED 714
+++ +NTKLYFGNLPYN DSAQLAGIIQ+YGSPEMVEVLY R TGRSRGFAFVTMSSIED
Sbjct: 101 NEIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIED 160
Query: 713 CNAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQE 534
CNAVIENLD S+Y GR LRVNFSD PKPKEPLYPETEYKLFVGNLSWS TSE LT+AFQE
Sbjct: 161 CNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSESLTQAFQE 220
Query: 533 YGNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 357
YGNVVGARVLYDG+TG+SRGYGFVCYST+ EM A+ +L+GVELEGR +RVS+A G++S
Sbjct: 221 YGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLAEGRKS 279