BLASTX nr result
ID: Cinnamomum24_contig00000036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00000036
(711 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KCW52065.1| hypothetical protein EUGRSUZ_J01502 [Eucalyptus g... 271 4e-70
ref|XP_010265138.1| PREDICTED: ribulose bisphosphate carboxylase... 270 6e-70
sp|P19311.1|RBS5_LEMGI RecName: Full=Ribulose bisphosphate carbo... 269 1e-69
sp|P19312.1|RBS6_LEMGI RecName: Full=Ribulose bisphosphate carbo... 268 2e-69
ref|XP_010263795.1| PREDICTED: ribulose bisphosphate carboxylase... 268 2e-69
ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chai... 268 2e-69
ref|XP_010032637.1| PREDICTED: ribulose bisphosphate carboxylase... 267 5e-69
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 267 5e-69
ref|XP_010263805.1| PREDICTED: ribulose bisphosphate carboxylase... 266 7e-69
ref|XP_009357812.1| PREDICTED: ribulose bisphosphate carboxylase... 266 9e-69
sp|P19308.1|RBS2_LEMGI RecName: Full=Ribulose bisphosphate carbo... 265 1e-68
ref|XP_010044264.1| PREDICTED: ribulose bisphosphate carboxylase... 265 2e-68
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 264 3e-68
gb|AEJ33935.1| chloroplast putative ribulose-1,5-bisphosphate ca... 262 1e-67
ref|XP_008381263.1| PREDICTED: ribulose bisphosphate carboxylase... 262 2e-67
sp|P19310.1|RBS4_LEMGI RecName: Full=Ribulose bisphosphate carbo... 261 3e-67
ref|XP_009342656.1| PREDICTED: ribulose bisphosphate carboxylase... 261 4e-67
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 260 6e-67
ref|XP_008368660.1| PREDICTED: ribulose bisphosphate carboxylase... 259 8e-67
sp|P19309.1|RBS3_LEMGI RecName: Full=Ribulose bisphosphate carbo... 259 1e-66
>gb|KCW52065.1| hypothetical protein EUGRSUZ_J01502 [Eucalyptus grandis]
Length = 180
Score = 271 bits (692), Expect = 4e-70
Identities = 128/153 (83%), Positives = 137/153 (89%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS SAFPVTRK N D++SLPSNGGRV CM VWPP GLKKFETLSYL PL+P Q
Sbjct: 25 VAPFTGLKSASAFPVTRKSN-DITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTPTQ 83
Query: 376 LAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 197
LA+EIDYLLR GWVPCLEF+ GFV+RE+H SPGYYDGRYWTMWKLPMFGCTDS+QVLKE
Sbjct: 84 LAKEIDYLLRSGWVPCLEFETEGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVLKE 143
Query: 196 LEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
LEE KK YP FVRIIGFDNKRQVQCISFIA+K
Sbjct: 144 LEECKKAYPTAFVRIIGFDNKRQVQCISFIAFK 176
>ref|XP_010265138.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 182
Score = 270 bits (690), Expect = 6e-70
Identities = 128/156 (82%), Positives = 138/156 (88%), Gaps = 1/156 (0%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSP 383
S VAPF+GLKS AFPVTRK N D+SSLPSNGGRV CM VWPP G KKFETLSYL PLSP
Sbjct: 23 SMVAPFSGLKSAXAFPVTRKANNDISSLPSNGGRVQCMQVWPPLGKKKFETLSYLPPLSP 82
Query: 382 EQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQV 206
E LA+E+DYLLRMGW+PCLEF+ + GFV+RE +RSPGYYDGRYWTMWKLPMFGCTDSSQV
Sbjct: 83 ESLAKEVDYLLRMGWIPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDSSQV 142
Query: 205 LKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
L ELEE KK YPN F+RIIGFDNKRQVQCISFIAYK
Sbjct: 143 LAELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAYK 178
>sp|P19311.1|RBS5_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU5A,
chloroplastic; Short=RuBisCO small subunit SSU5A; Flags:
Precursor [Lemna gibba] gi|295820|emb|CAA35099.1|
ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 269 bits (688), Expect = 1e-69
Identities = 124/155 (80%), Positives = 135/155 (87%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSP 383
S VAPF GL+S+ AFP TRK N D+S+LPSNGGRVSCM VWPPEGLKKFETLSYL PLS
Sbjct: 21 SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80
Query: 382 EQLAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVL 203
E LA+E+DYLLR WVPC+EF K GFV+RE H SPGYYDGRYWTMWKLPMFGCTD+SQV+
Sbjct: 81 EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140
Query: 202 KELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
E+EE KK YP YFVRIIGFDNKRQVQCISFIAYK
Sbjct: 141 AEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175
>sp|P19312.1|RBS6_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU5B,
chloroplastic; Short=RuBisCO small subunit SSU5B; Flags:
Precursor [Lemna gibba] gi|295821|emb|CAA35100.1|
ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 268 bits (685), Expect = 2e-69
Identities = 123/153 (80%), Positives = 134/153 (87%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPF GL+S+ AFP TRK N D+S+LPSNGGRVSCM VWPPEGLKKFETLSYL PLS E
Sbjct: 23 VAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVED 82
Query: 376 LAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 197
LA+E+DYLLR WVPC+EF K GFV+RE H SPGYYDGRYWTMWKLPMFGCTD+SQV+ E
Sbjct: 83 LAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142
Query: 196 LEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
+EE KK YP YFVRIIGFDNKRQVQCISFIAYK
Sbjct: 143 VEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175
>ref|XP_010263795.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 184
Score = 268 bits (685), Expect = 2e-69
Identities = 129/158 (81%), Positives = 139/158 (87%), Gaps = 3/158 (1%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLP--SNGGRVSCMMVWPPEGLKKFETLSYLRPL 389
S VAPFTGLKS SAFPVTRK N D++SLP SNGGRV CM VWPP G KKFETLSYL PL
Sbjct: 23 SMVAPFTGLKSASAFPVTRKANNDITSLPLPSNGGRVQCMQVWPPTGKKKFETLSYLPPL 82
Query: 388 SPEQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSS 212
SPE LA+E+DYLLRMGW+PCLEF+ + GFV+RE +RSPGYYDGRYWTMWKLPMFGCTDSS
Sbjct: 83 SPESLAKEVDYLLRMGWIPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDSS 142
Query: 211 QVLKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
QVL ELEE KK YPN F+RIIGFDNKRQVQCISFIAYK
Sbjct: 143 QVLAELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAYK 180
>ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528742|gb|EEF30752.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 180
Score = 268 bits (685), Expect = 2e-69
Identities = 127/159 (79%), Positives = 139/159 (87%), Gaps = 1/159 (0%)
Frame = -3
Query: 571 PRLSTVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRP 392
P+ S VAPFTGLKS+S FPVTRK N D+++L SNGG+V CM VWPP G KKFETLSYL P
Sbjct: 18 PQASMVAPFTGLKSSSVFPVTRKQNNDITTLASNGGKVHCMQVWPPVGKKKFETLSYLPP 77
Query: 391 LSPEQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDS 215
LS E LA+E+DYLLRMGWVPCLEF+ + GFV+RE HRSPGYYDGR WTMWKLPMFGCTDS
Sbjct: 78 LSEESLAKEVDYLLRMGWVPCLEFELEHGFVYRENHRSPGYYDGRCWTMWKLPMFGCTDS 137
Query: 214 SQVLKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
SQVLKELEE KK YPN F+RIIGFDNKRQVQCISFIAYK
Sbjct: 138 SQVLKELEEAKKAYPNSFIRIIGFDNKRQVQCISFIAYK 176
>ref|XP_010032637.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Eucalyptus grandis]
Length = 181
Score = 267 bits (682), Expect = 5e-69
Identities = 128/154 (83%), Positives = 138/154 (89%), Gaps = 1/154 (0%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS SAFPVTRK N D++SLPSNGGRV CM VWPP GLKKFETLSYL PL+P Q
Sbjct: 25 VAPFTGLKSASAFPVTRKSN-DITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTPTQ 83
Query: 376 LAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 200
LA+EIDYLLR GWVPCLEF+ + GFV+RE+H SPGYYDGRYWTMWKLPMFGCTDS+QVLK
Sbjct: 84 LAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVLK 143
Query: 199 ELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
ELEE KK YP FVRIIGFDNKRQVQCISFIA+K
Sbjct: 144 ELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFK 177
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 267 bits (682), Expect = 5e-69
Identities = 128/154 (83%), Positives = 138/154 (89%), Gaps = 1/154 (0%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS SAFPVTRK N D++SLPSNGGRV CM VWPP GLKKFETLSYL PL+P Q
Sbjct: 25 VAPFTGLKSASAFPVTRKSN-DITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTPTQ 83
Query: 376 LAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 200
LA+EIDYLLR GWVPCLEF+ + GFV+RE+H SPGYYDGRYWTMWKLPMFGCTDS+QVLK
Sbjct: 84 LAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVLK 143
Query: 199 ELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
ELEE KK YP FVRIIGFDNKRQVQCISFIA+K
Sbjct: 144 ELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFK 177
>ref|XP_010263805.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 182
Score = 266 bits (681), Expect = 7e-69
Identities = 127/156 (81%), Positives = 137/156 (87%), Gaps = 1/156 (0%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSP 383
S VAPFTGLKS SAFPVTRK N D++SL SNGGRV CM VWPP KKFETLSYL PLSP
Sbjct: 23 SMVAPFTGLKSVSAFPVTRKTNNDITSLSSNGGRVQCMQVWPPIAKKKFETLSYLPPLSP 82
Query: 382 EQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQV 206
E LA+E+DYLLRMGW+PCLEF+ + GFV+RE +RSPGYYDGRYWTMWKLPMFGCTDSSQV
Sbjct: 83 ESLAKEVDYLLRMGWIPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDSSQV 142
Query: 205 LKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
L ELEE KK YPN F+RIIGFDNKRQVQCISFIAYK
Sbjct: 143 LAELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAYK 178
>ref|XP_009357812.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like isoform X1 [Pyrus x bretschneideri]
Length = 183
Score = 266 bits (680), Expect = 9e-69
Identities = 127/156 (81%), Positives = 138/156 (88%), Gaps = 1/156 (0%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSP 383
S VAPFTGLKS+SAFPVTRK N D++S+ SNGGRV CM VWPP GLKKFETLSYL PLSP
Sbjct: 25 SMVAPFTGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSP 83
Query: 382 EQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQV 206
E LA+E+DYLLR WVPCLEF+ + GFV+RE H+SPGYYDGRYWTMWKLPMFGCTDSSQV
Sbjct: 84 ESLAKEVDYLLRKNWVPCLEFELETGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDSSQV 143
Query: 205 LKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
LKELEE KK YPN F+RIIGFDN RQVQCISFIAYK
Sbjct: 144 LKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYK 179
>sp|P19308.1|RBS2_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU26,
chloroplastic; Short=RuBisCO small subunit SSU26; Flags:
Precursor [Lemna gibba] gi|295817|emb|CAA35101.1|
ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 265 bits (678), Expect = 1e-68
Identities = 121/153 (79%), Positives = 134/153 (87%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPF GL+S+ AFP TRK N ++S+LPSNGG+VSCM VWPPEGLKKFETLSYL PLS E
Sbjct: 23 VAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSVED 82
Query: 376 LAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 197
LA+E+DYLLR WVPC+EF K GFV+RE H SPGYYDGRYWTMWKLPMFGCTD+SQV+ E
Sbjct: 83 LAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142
Query: 196 LEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
+EE KK YP YFVRIIGFDNKRQVQCISFIAYK
Sbjct: 143 VEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175
>ref|XP_010044264.1| PREDICTED: ribulose bisphosphate carboxylase small chain 3B,
chloroplastic-like [Eucalyptus grandis]
gi|270383724|dbj|BAI53120.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Eucalyptus
globulus] gi|629121834|gb|KCW86324.1| hypothetical
protein EUGRSUZ_B03013 [Eucalyptus grandis]
Length = 179
Score = 265 bits (677), Expect = 2e-68
Identities = 125/154 (81%), Positives = 136/154 (88%), Gaps = 1/154 (0%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS SAFPVTRK + D++SL SNGGRV CM VWPP G KKFETLSYL PLSPE
Sbjct: 22 VAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQVWPPIGKKKFETLSYLPPLSPES 81
Query: 376 LAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 200
LA+E+DYLLR GWVPCLEF+ + GFV+RE+H SPGYYDGRYWTMWKLPMFGCTDS+QVLK
Sbjct: 82 LAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYDGRYWTMWKLPMFGCTDSAQVLK 141
Query: 199 ELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
ELEE KK YP F+RIIGFDNKRQVQCISFIAYK
Sbjct: 142 ELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYK 175
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 264 bits (675), Expect = 3e-68
Identities = 124/156 (79%), Positives = 137/156 (87%), Gaps = 1/156 (0%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSP 383
S VAPFTGLKS SAFP+TRK N D++SLPSNGGRV CM VWPP GLKKFETLSYL PL+
Sbjct: 23 SMVAPFTGLKSASAFPITRKTNSDITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTS 82
Query: 382 EQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQV 206
E LA+E+D+LLR WVPCLEF+ + GFV+RE H+SPGYYDGRYWTMWKLPMFGCTD+SQV
Sbjct: 83 ESLAKEVDFLLRNKWVPCLEFELEKGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDASQV 142
Query: 205 LKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
LKELEE KK YPN F+RIIGFDN RQVQCISFIAYK
Sbjct: 143 LKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYK 178
>gb|AEJ33935.1| chloroplast putative ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Wolffia
australiana]
Length = 177
Score = 262 bits (670), Expect = 1e-67
Identities = 116/153 (75%), Positives = 134/153 (87%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPF GL+S++A P TRK N D+S+L SNGG+ CM VWPPEGLKKFETLSYL PLS E
Sbjct: 23 VAPFNGLRSSAALPATRKANADLSTLLSNGGKARCMQVWPPEGLKKFETLSYLPPLSTEA 82
Query: 376 LAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 197
LA+E++YL+R GW+PC+EF K GFV+REYH SPGYYDGRYWTMWKLPMFGCTD+SQV+ E
Sbjct: 83 LAKEVEYLIRNGWIPCIEFSKEGFVYREYHASPGYYDGRYWTMWKLPMFGCTDASQVIAE 142
Query: 196 LEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
+EE KK YP+YFVRIIGFDNKRQVQC+SFIAYK
Sbjct: 143 VEEAKKAYPDYFVRIIGFDNKRQVQCVSFIAYK 175
>ref|XP_008381263.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Malus domestica]
Length = 183
Score = 262 bits (669), Expect = 2e-67
Identities = 126/156 (80%), Positives = 137/156 (87%), Gaps = 1/156 (0%)
Frame = -3
Query: 562 STVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSP 383
S VAPFTGLKS+SAFPVTRK N D++S+ SNGGRV CM VWPP GLKKFETLSYL PLS
Sbjct: 25 SMVAPFTGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSS 83
Query: 382 EQLAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQV 206
E LA+E+DYLLR WVPCLEF+ + GFV+RE H+SPGYYDGRYWTMWKLPMFGCTDSSQV
Sbjct: 84 ESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDSSQV 143
Query: 205 LKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
LKELEE KK YPN F+RIIGFDN RQVQCISFIAYK
Sbjct: 144 LKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYK 179
>sp|P19310.1|RBS4_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU40B,
chloroplastic; Short=RuBisCO small subunit SSU40B;
Flags: Precursor [Lemna gibba] gi|295819|emb|CAA35103.1|
ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 261 bits (667), Expect = 3e-67
Identities = 119/158 (75%), Positives = 132/158 (83%)
Frame = -3
Query: 571 PRLSTVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRP 392
P + + PF +S+ FP TRK N D+S+LPSNGGRVSCM VWPPEGLKKFETLSYL P
Sbjct: 18 PAQTNMVPFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPP 77
Query: 391 LSPEQLAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSS 212
LS E LA+E+DYLLR WVPC+EF K GFV+RE H SPGYYDGRYWTMWKLPMFGCTD+S
Sbjct: 78 LSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137
Query: 211 QVLKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
QV+ E+EE KK YP YFVRIIGFDNKRQVQCISFIAYK
Sbjct: 138 QVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175
>ref|XP_009342656.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Pyrus x bretschneideri]
Length = 183
Score = 261 bits (666), Expect = 4e-67
Identities = 125/154 (81%), Positives = 135/154 (87%), Gaps = 1/154 (0%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS+SAFPVTRK N D++S+ SNGGRV CM VWPP GLKKFETLSYL PLS E
Sbjct: 27 VAPFTGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSES 85
Query: 376 LAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 200
LA+E+DYLLR WVPCLEF+ + GFV+RE HRSPGYYDGRYWTMWKLPMFGCTDSSQVLK
Sbjct: 86 LAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 145
Query: 199 ELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
ELEE KK YP F+RIIGFDN RQVQCISFIAYK
Sbjct: 146 ELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYK 179
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 260 bits (664), Expect = 6e-67
Identities = 121/154 (78%), Positives = 135/154 (87%), Gaps = 1/154 (0%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS SAFP TRK N D++S+ SNGGRV CM VWPP G KKFETLSYL L+P Q
Sbjct: 23 VAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQ 82
Query: 376 LAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 200
LA+E+DYLLR GW+PCLEF+ + GFV+RE+H SPGYYDGRYWTMWKLPMFGCTDSSQVLK
Sbjct: 83 LAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLK 142
Query: 199 ELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
ELEE KK YP+ F+RIIGFDN+RQVQCISFIAYK
Sbjct: 143 ELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYK 176
>ref|XP_008368660.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic isoform X1 [Malus domestica]
Length = 179
Score = 259 bits (663), Expect = 8e-67
Identities = 125/154 (81%), Positives = 135/154 (87%), Gaps = 1/154 (0%)
Frame = -3
Query: 556 VAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRPLSPEQ 377
VAPFTGLKS+SAFPVTRK N D++S+ SNGGRV CM VWPP GLKKFETLSYL PLS E
Sbjct: 23 VAPFTGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTES 81
Query: 376 LAREIDYLLRMGWVPCLEFD-KVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 200
LA+E+DYLLR WVPCLEF+ + GFV+RE HRSPGYYDGRYWTMWKLPMFGCTDSSQVLK
Sbjct: 82 LAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLK 141
Query: 199 ELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
ELEE KK YP F+RIIGFDN RQVQCISFIAYK
Sbjct: 142 ELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYK 175
>sp|P19309.1|RBS3_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU40A,
chloroplastic; Short=RuBisCO small subunit SSU40A;
Flags: Precursor [Lemna gibba] gi|295818|emb|CAA35102.1|
ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 259 bits (662), Expect = 1e-66
Identities = 118/158 (74%), Positives = 132/158 (83%)
Frame = -3
Query: 571 PRLSTVAPFTGLKSNSAFPVTRKPNMDMSSLPSNGGRVSCMMVWPPEGLKKFETLSYLRP 392
P S++ PF +S+ FP TRK N ++S+LP NGGRVSCM VWPPEGLKKFETLSYL P
Sbjct: 18 PAQSSMVPFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQVWPPEGLKKFETLSYLPP 77
Query: 391 LSPEQLAREIDYLLRMGWVPCLEFDKVGFVHREYHRSPGYYDGRYWTMWKLPMFGCTDSS 212
LS E LA+E+DYLLR WVPC+EF K GFV+RE H SPGYYDGRYWTMWKLPMFGCTD+S
Sbjct: 78 LSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137
Query: 211 QVLKELEEVKKMYPNYFVRIIGFDNKRQVQCISFIAYK 98
QV+ E+EE KK YP YFVRIIGFDNKRQVQCISFIAYK
Sbjct: 138 QVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175