BLASTX nr result
ID: Cinnamomum23_contig00062251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00062251
(279 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 136 6e-30
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 135 1e-29
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 135 1e-29
dbj|BAA22288.1| polyprotein [Oryza australiensis] 134 3e-29
ref|WP_042516654.1| hypothetical protein, partial [Lactobacillus... 132 7e-29
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 132 9e-29
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 132 1e-28
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 130 3e-28
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 130 3e-28
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 130 3e-28
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 129 6e-28
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 129 8e-28
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 129 8e-28
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 129 1e-27
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 129 1e-27
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 128 1e-27
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 127 2e-27
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 126 5e-27
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 126 5e-27
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 126 6e-27
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 136 bits (342), Expect = 6e-30
Identities = 62/93 (66%), Positives = 77/93 (82%)
Frame = +1
Query: 1 VEDGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGY 180
V+DG LSSL +E LP CESCL GKMTKR F KG R+ ++LEL+H+D+C PM+ ARGG+
Sbjct: 780 VKDGPLSSLKVEALPTCESCLEGKMTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGGF 839
Query: 181 EYFITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
EYF+TFTDDYSRYGY+YL+ RKS+ F+KFK FK
Sbjct: 840 EYFVTFTDDYSRYGYIYLLCRKSECFEKFKAFK 872
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 135 bits (340), Expect = 1e-29
Identities = 57/92 (61%), Positives = 77/92 (83%)
Frame = +1
Query: 4 EDGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYE 183
+DG+L+S DLE CESC++GKMTK F+G+ R+ +LL L+HTDVC PM+ ARGG++
Sbjct: 545 DDGILNSFDLESFETCESCILGKMTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQ 604
Query: 184 YFITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
YFITFTDDYSRYGY+YLM+ KS++F+KFK+F+
Sbjct: 605 YFITFTDDYSRYGYIYLMRHKSESFEKFKEFQ 636
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 135 bits (340), Expect = 1e-29
Identities = 61/93 (65%), Positives = 78/93 (83%)
Frame = +1
Query: 1 VEDGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGY 180
V+ G+L+ L+ LP CESCL GKMTKRSF+GKGLR+K LELVH+D+C PMN ARGGY
Sbjct: 461 VKSGILNQLEDNSLPPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGY 520
Query: 181 EYFITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
EYFI+F DD+SRYG+VYL+ KS++F+KFK++K
Sbjct: 521 EYFISFIDDFSRYGHVYLLHHKSESFEKFKEYK 553
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 134 bits (336), Expect = 3e-29
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = +1
Query: 4 EDGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYE 183
+DGLL S D E CESCL+GKMTK F+G R+ +LL LVHTDVC PM+ ARGGY+
Sbjct: 457 KDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQ 516
Query: 184 YFITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
YFITFTDD+SRYGY+YLM+ KS++F+KFK+F+
Sbjct: 517 YFITFTDDFSRYGYIYLMRHKSESFEKFKEFQ 548
>ref|WP_042516654.1| hypothetical protein, partial [Lactobacillus brevis]
Length = 463
Score = 132 bits (333), Expect = 7e-29
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL SLD + L CE CLMGKMTK FSG R+ +LLE++HTDVC PM+ ARGGY Y
Sbjct: 276 DGLLESLDFDSLDTCEPCLMGKMTKTPFSGTMERASDLLEIIHTDVCGPMSVEARGGYRY 335
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
F+TFTDD SRYGYVYLM+ KS+ F+KFKQF+
Sbjct: 336 FLTFTDDLSRYGYVYLMKHKSETFEKFKQFQ 366
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 132 bits (332), Expect = 9e-29
Identities = 60/93 (64%), Positives = 76/93 (81%)
Frame = +1
Query: 1 VEDGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGY 180
V+DG LSSL +E LP CESCL GKMT R F KG R+ ++LEL+H+D+C PM+ ARGG+
Sbjct: 428 VKDGPLSSLKVEALPTCESCLEGKMTNRPFPLKGNRANDVLELIHSDLCGPMSVQARGGF 487
Query: 181 EYFITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
EYF+TFT DYSRYGY+YL++RKS+ F+KFK FK
Sbjct: 488 EYFVTFTYDYSRYGYIYLLRRKSECFEKFKAFK 520
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 132 bits (331), Expect = 1e-28
Identities = 60/91 (65%), Positives = 73/91 (80%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 402 DGLLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGY 461
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+SRYGYVYLM+ KS++F+KFK+F+
Sbjct: 462 FITFTDDFSRYGYVYLMRHKSESFEKFKKFQ 492
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 130 bits (328), Expect = 3e-28
Identities = 59/90 (65%), Positives = 71/90 (78%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 434 DGLLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLALVHTDVCGPMSSTARGGFGY 493
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQF 276
F TFTDD+SRYGYVYLM+ KS++F+KFK+F
Sbjct: 494 FFTFTDDFSRYGYVYLMRHKSESFEKFKEF 523
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 130 bits (327), Expect = 3e-28
Identities = 60/91 (65%), Positives = 73/91 (80%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL SLD E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ AR G+ Y
Sbjct: 934 DGLLHSLDFESFETCESCLLGKMTKAPFTGQSERTSELLVLVHTDVCGPMSSTARCGFGY 993
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+SRYGYVYLM+ KS++F+KFK+F+
Sbjct: 994 FITFTDDFSRYGYVYLMRHKSESFEKFKEFQ 1024
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 130 bits (327), Expect = 3e-28
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ AR G+ Y
Sbjct: 453 DGLLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLALVHTDVCGPMSSTARSGFGY 512
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+SRYGYVYLM+ KS++F+KFK+F+
Sbjct: 513 FITFTDDFSRYGYVYLMRHKSESFEKFKEFQ 543
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 129 bits (325), Expect = 6e-28
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL+S D E CESCL+GKMTK F+G R+ +LL L+HTDVC PM+ ARG Y+Y
Sbjct: 102 DGLLNSFDYESYETCESCLLGKMTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQY 161
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+SRYGYVYLM+ KSK+F+ FK+F+
Sbjct: 162 FITFTDDFSRYGYVYLMKHKSKSFENFKEFQ 192
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 129 bits (324), Expect = 8e-28
Identities = 58/91 (63%), Positives = 73/91 (80%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 423 DGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGY 482
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTD++SRYGYVYLM+ KS++F+KF++F+
Sbjct: 483 FITFTDEFSRYGYVYLMRHKSESFEKFQEFQ 513
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 129 bits (324), Expect = 8e-28
Identities = 58/91 (63%), Positives = 73/91 (80%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 336 DGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGY 395
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTD++SRYGYVYLM+ KS++F+KF++F+
Sbjct: 396 FITFTDEFSRYGYVYLMRHKSESFEKFQEFQ 426
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 129 bits (323), Expect = 1e-27
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GK+TK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 7 DGLLHSFDFESFETCESCLLGKITKAPFTGQSERASELLRLVHTDVCGPMSSTARGGFGY 66
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQF 276
FI FTDD+SRYGYVYLM+ KS++F+KFK+F
Sbjct: 67 FIIFTDDFSRYGYVYLMRHKSESFEKFKEF 96
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 129 bits (323), Expect = 1e-27
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GK+TK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 7 DGLLHSFDFESFETCESCLLGKITKAPFTGQSERASELLRLVHTDVCGPMSSTARGGFGY 66
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQF 276
FI FTDD+SRYGYVYLM+ KS++F+KFK+F
Sbjct: 67 FIIFTDDFSRYGYVYLMRHKSESFEKFKEF 96
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 128 bits (322), Expect = 1e-27
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ ++ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 343 DGLLHSFDFESFETCESCLLGKMTKAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGY 402
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFT+D+SRYGYVYLM+ KS +F+KFK+F+
Sbjct: 403 FITFTNDFSRYGYVYLMRHKSDSFEKFKEFQ 433
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 127 bits (320), Expect = 2e-27
Identities = 57/91 (62%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S E CESCL+GKMTK F+G+ R+ ELL LVHTD+C PM+ A+GG+ Y
Sbjct: 417 DGLLHSFGFESFETCESCLLGKMTKAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGY 476
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+SRYGYVYLM+ KS++F+KFK+F+
Sbjct: 477 FITFTDDFSRYGYVYLMRHKSESFEKFKKFQ 507
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 126 bits (317), Expect = 5e-27
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E ESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 510 DGLLHSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGY 569
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+S+YGYVYLM+ KS++F+KFK+F+
Sbjct: 570 FITFTDDFSKYGYVYLMRHKSESFEKFKEFQ 600
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 126 bits (317), Expect = 5e-27
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E ESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 437 DGLLHSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGY 496
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+S+YGYVYLM+ KS++F+KFK+F+
Sbjct: 497 FITFTDDFSKYGYVYLMRHKSESFEKFKEFQ 527
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 126 bits (316), Expect = 6e-27
Identities = 58/91 (63%), Positives = 71/91 (78%)
Frame = +1
Query: 7 DGLLSSLDLEPLPQCESCLMGKMTKRSFSGKGLRSKELLELVHTDVCSPMNKLARGGYEY 186
DGLL S D E CESCL+GKMTK F+G+ R+ ELL LVHTDVC PM+ ARGG+ Y
Sbjct: 550 DGLLHSFDFESFETCESCLLGKMTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGY 609
Query: 187 FITFTDDYSRYGYVYLMQRKSKAFDKFKQFK 279
FITFTDD+SR GYVYLM+ KS++ +KFK+F+
Sbjct: 610 FITFTDDFSRCGYVYLMRHKSESVEKFKKFQ 640