BLASTX nr result
ID: Cinnamomum23_contig00060612
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00060612
(369 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30818.1| unnamed protein product [Nicotiana plumbaginifolia] 94 5e-17
gb|AAN65254.1| PSII 32 kDa protein, partial (chloroplast) [Popul... 94 5e-17
gb|AGU12571.1| photosystem II D1 subunit, partial (chloroplast) ... 94 5e-17
dbj|BAA96363.1| photosystem II Qb protein [Bruguiera gymnorhiza] 94 5e-17
ref|XP_006396153.1| hypothetical protein EUTSA_v10002847mg, part... 93 6e-17
gb|AKF00154.1| photosystem II protein D1 (chloroplast) [Pelagodo... 92 1e-16
gb|AJO70645.1| protein D1, partial [uncultured organism] 92 1e-16
ref|YP_009117400.1| photosystem II protein D1 [Callitropsis noot... 92 1e-16
ref|YP_009106253.1| D1 reaction center protein of photosystem II... 92 1e-16
ref|YP_636503.1| D1 reaction center protein of photosystem II (c... 92 1e-16
gb|AGS48263.1| photosystem II protein D1, partial (chloroplast) ... 92 1e-16
gb|AGZ19379.1| photosystem II D1 protein (chloroplast) (chloropl... 92 1e-16
gb|AGF41131.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
gb|AGF41125.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
gb|AGF41123.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
gb|AGF41120.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
gb|AGF41117.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
gb|AGF41116.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
gb|AGF41115.1| photosystem II D1 apoprotein, partial (chloroplas... 92 1e-16
emb|CBW44607.1| photosystem II protein D1, partial (chloroplast)... 92 1e-16
>emb|CAA30818.1| unnamed protein product [Nicotiana plumbaginifolia]
Length = 353
Score = 93.6 bits (231), Expect = 5e-17
Identities = 43/50 (86%), Positives = 43/50 (86%)
Frame = -2
Query: 152 NSNNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
N NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 264 NFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRV 313
>gb|AAN65254.1| PSII 32 kDa protein, partial (chloroplast) [Populus tomentosa]
Length = 105
Score = 93.6 bits (231), Expect = 5e-17
Identities = 43/48 (89%), Positives = 43/48 (89%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFTVLG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 18 NNSRSLHFFLAAWPVVGIWFTVLGISTMAFNLNGFNFNQSVVDSQGRV 65
>gb|AGU12571.1| photosystem II D1 subunit, partial (chloroplast) [Silene latifolia]
Length = 347
Score = 93.6 bits (231), Expect = 5e-17
Identities = 43/48 (89%), Positives = 43/48 (89%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWPAVG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 266 NNSRSLHFFLAAWPAVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRV 313
>dbj|BAA96363.1| photosystem II Qb protein [Bruguiera gymnorhiza]
Length = 128
Score = 93.6 bits (231), Expect = 5e-17
Identities = 43/48 (89%), Positives = 43/48 (89%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFTVLG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 41 NNSRSLHFFLAAWPVVGIWFTVLGISTMAFNLNGFNFNQSVVDSQGRV 88
>ref|XP_006396153.1| hypothetical protein EUTSA_v10002847mg, partial [Eutrema
salsugineum] gi|557096424|gb|ESQ36932.1| hypothetical
protein EUTSA_v10002847mg, partial [Eutrema salsugineum]
Length = 163
Score = 93.2 bits (230), Expect = 6e-17
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = -2
Query: 200 TSHMLKIHSWTTPFHNNSNNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVV 21
T ++L H + NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVV
Sbjct: 58 TYNILAAHGYFGRLIFRFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVV 117
Query: 20 DSQGRV 3
DSQGRV
Sbjct: 118 DSQGRV 123
>gb|AKF00154.1| photosystem II protein D1 (chloroplast) [Pelagodoxa henryana]
Length = 353
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 266 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 313
>gb|AJO70645.1| protein D1, partial [uncultured organism]
Length = 264
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 200 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 247
>ref|YP_009117400.1| photosystem II protein D1 [Callitropsis nootkatensis]
gi|756877442|ref|YP_009117646.1| photosystem II protein
D1 [Callitropsis vietnamensis]
gi|748990494|gb|AJE70943.1| photosystem II protein D1
[Callitropsis nootkatensis] gi|748990742|gb|AJE71188.1|
photosystem II protein D1 [Callitropsis vietnamensis]
Length = 353
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 266 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 313
>ref|YP_009106253.1| D1 reaction center protein of photosystem II (chloroplast)
[Planctonema lauterbornii]
gi|725651229|ref|YP_009106240.1| D1 reaction center
protein of photosystem II (chloroplast) [Planctonema
lauterbornii] gi|698349553|gb|AIT95016.1| D1 reaction
center protein of photosystem II (chloroplast)
[Planctonema lauterbornii] gi|698349602|gb|AIT95065.1|
D1 reaction center protein of photosystem II
(chloroplast) [Planctonema lauterbornii]
Length = 353
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 266 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 313
>ref|YP_636503.1| D1 reaction center protein of photosystem II (chloroplast) [Zygnema
circumcarinatum] gi|122211745|sp|Q32RM3.1|PSBA_ZYGCR
RecName: Full=Photosystem II protein D1; Short=PSII D1
protein; AltName: Full=Photosystem II Q(B) protein;
Flags: Precursor (chloroplast) [Zygnema circumcarinatum]
gi|61393694|gb|AAX45836.1| D1 reaction center protein of
photosystem II (chloroplast) [Zygnema circumcarinatum]
Length = 352
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 266 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 313
>gb|AGS48263.1| photosystem II protein D1, partial (chloroplast) [Chlorella sp.
2009100806]
Length = 310
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 255 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 302
>gb|AGZ19379.1| photosystem II D1 protein (chloroplast) (chloroplast) [Chlorella
sp. ArM0029B]
Length = 353
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 266 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 313
>gb|AGF41131.1| photosystem II D1 apoprotein, partial (chloroplast) [Spirogyra sp.
KCH251] gi|451588458|gb|AGF41132.1| photosystem II D1
apoprotein, partial (chloroplast) [Spirogyra sp. KCH275]
gi|451588462|gb|AGF41134.1| photosystem II D1
apoprotein, partial (chloroplast) [Spirogyra decimina]
gi|451588464|gb|AGF41135.1| photosystem II D1
apoprotein, partial (chloroplast) [Spirogyra decimina]
Length = 307
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>gb|AGF41125.1| photosystem II D1 apoprotein, partial (chloroplast) [Zygnema
leiospermum] gi|451588446|gb|AGF41126.1| photosystem II
D1 apoprotein, partial (chloroplast) [Zygnema
leiospermum] gi|451588448|gb|AGF41127.1| photosystem II
D1 apoprotein, partial (chloroplast) [Zygnema
leiospermum] gi|451588450|gb|AGF41128.1| photosystem II
D1 apoprotein, partial (chloroplast) [Zygnema
leiospermum] gi|451588452|gb|AGF41129.1| photosystem II
D1 apoprotein, partial (chloroplast) [Zygnema
leiospermum]
Length = 307
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>gb|AGF41123.1| photosystem II D1 apoprotein, partial (chloroplast) [Zygnema
insigne]
Length = 307
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>gb|AGF41120.1| photosystem II D1 apoprotein, partial (chloroplast) [Mougeotia sp.
UTEX 2496] gi|451588436|gb|AGF41121.1| photosystem II D1
apoprotein, partial (chloroplast) [Zygnema insigne]
gi|451588438|gb|AGF41122.1| photosystem II D1
apoprotein, partial (chloroplast) [Zygnema insigne]
gi|451588442|gb|AGF41124.1| photosystem II D1
apoprotein, partial (chloroplast) [Zygnema insigne]
Length = 307
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>gb|AGF41117.1| photosystem II D1 apoprotein, partial (chloroplast) [Mougeotia sp.
4 KCH175] gi|451588460|gb|AGF41133.1| photosystem II D1
apoprotein, partial (chloroplast) [Spirogyra
ellipsospora] gi|451588466|gb|AGF41136.1| photosystem II
D1 apoprotein, partial (chloroplast) [Spirogyra
ellipsospora]
Length = 307
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>gb|AGF41116.1| photosystem II D1 apoprotein, partial (chloroplast) [Mougeotia sp.
1 KCH223] gi|451588430|gb|AGF41118.1| photosystem II D1
apoprotein, partial (chloroplast) [Mougeotia sp. 1
KCH223]
Length = 308
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>gb|AGF41115.1| photosystem II D1 apoprotein, partial (chloroplast) [Mougeotia sp.
2 KCH47] gi|451588432|gb|AGF41119.1| photosystem II D1
apoprotein, partial (chloroplast) [Mougeotia sp. 3
KCH258]
Length = 307
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 254 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 301
>emb|CBW44607.1| photosystem II protein D1, partial (chloroplast) [uncultured marine
eukaryote]
Length = 264
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -2
Query: 146 NNSRSLHFFLAAWPAVGFWFTVLGTGTMAFTLNGFNFNQSVVDSQGRV 3
NNSRSLHFFLAAWP VG WFT LG TMAF LNGFNFNQSVVDSQGRV
Sbjct: 200 NNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSVVDSQGRV 247