BLASTX nr result

ID: Cinnamomum23_contig00060356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00060356
         (377 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05517.1| OSJNBa0038P21.10 [Oryza sativa Japonica Group]         59   1e-06
emb|CAN66507.1| hypothetical protein VITISV_034008 [Vitis vinifera]    57   6e-06
gb|ADF45903.1| reverse transcriptase, partial [Eleocharis quinqu...    56   8e-06

>emb|CAE05517.1| OSJNBa0038P21.10 [Oryza sativa Japonica Group]
          Length = 786

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = -2

Query: 223 IVYFLRKSLYALEYAPRIWFDKFRHIILRAHFD*SPNDNSLFI*GNPQGCTFMLPYVD 50
           +V  LR SLY L+ APR WF +F  ++L A F  S +D +LF+  +P+GCT +L YVD
Sbjct: 270 MVCCLRCSLYGLKQAPRAWFQRFSSVVLEAGFSTSAHDPALFVHTSPRGCTVLLLYVD 327


>emb|CAN66507.1| hypothetical protein VITISV_034008 [Vitis vinifera]
          Length = 1260

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -2

Query: 235  YVCQIVYFLRKSLYALEYAPRIWFDKFRHIILRAHFD*SPNDNSLFI*GNPQGCTFMLPY 56
            +VC+    LR+SLY L+ APR WFDKFR  +L+  F  S  D SLF+  +  G  F+L Y
Sbjct: 926  HVCK----LRRSLYGLKQAPRAWFDKFRTTLLQFSFRQSKYDTSLFLRKSDMGIVFLLVY 981

Query: 55   VD 50
            VD
Sbjct: 982  VD 983


>gb|ADF45903.1| reverse transcriptase, partial [Eleocharis quinqueflora]
          Length = 87

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = -2

Query: 211 LRKSLYALEYAPRIWFDKFRHIILRAHFD*SPNDNSLFI*GNPQGCTFMLPYVD 50
           LR+SLY L+ APR WF  F++++L A F  SP D S+FI  +P+G    L YVD
Sbjct: 31  LRRSLYGLKQAPREWFHTFKNVVLSAGFQQSPYDPSMFISKSPKGMALTLIYVD 84


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