BLASTX nr result
ID: Cinnamomum23_contig00056729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00056729
(366 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008228034.1| PREDICTED: putative ribonuclease H protein A... 110 5e-22
ref|XP_010473926.1| PREDICTED: uncharacterized protein LOC104753... 103 3e-20
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 103 6e-20
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 102 8e-20
ref|XP_011457336.1| PREDICTED: uncharacterized protein LOC105349... 102 8e-20
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 102 1e-19
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 102 1e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 102 1e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 102 1e-19
ref|XP_007039838.1| RNA-directed DNA polymerase (Reverse transcr... 101 2e-19
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 101 2e-19
ref|XP_011459751.1| PREDICTED: uncharacterized protein LOC105350... 100 4e-19
ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein A... 100 5e-19
ref|XP_010668235.1| PREDICTED: uncharacterized protein LOC104885... 99 8e-19
ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844... 99 8e-19
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 99 8e-19
gb|AID60103.1| hypothetical protein [Brassica napus] 99 8e-19
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 99 8e-19
ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A... 99 1e-18
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 99 1e-18
>ref|XP_008228034.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 751
Score = 110 bits (274), Expect = 5e-22
Identities = 47/111 (42%), Positives = 73/111 (65%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
++ + L+D ++ RL +WK+K LS AG LI+ V +SIP++ +P+S+CND++RL
Sbjct: 342 KRTYSSLVDKVHKRLAAWKSKLLSLAGRATLIQAVTTSIPVYAMQTTKLPVSVCNDLDRL 401
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
RNF W S + KI+ W+L C PK +GGLG +K + +N A L K+GW+
Sbjct: 402 NRNFFWGSSEKKYKIHLCQWDLACRPKGKGGLGFKKTASMNQALLAKIGWR 452
>ref|XP_010473926.1| PREDICTED: uncharacterized protein LOC104753360 [Camelina sativa]
Length = 811
Score = 103 bits (258), Expect = 3e-20
Identities = 44/111 (39%), Positives = 74/111 (66%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
++ F +++ +++RL WK+ TLS AG L L K +LSSIP+H+ + + +P + ++++
Sbjct: 568 KETFGEVLERVSSRLAGWKSHTLSLAGRLTLTKALLSSIPVHSMSTIMLPKATLASLDKI 627
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
R F W G+G+ K N V+W VC+PK +GGLGIR ++N A + K+GW+
Sbjct: 628 SRTFLWGGTGERRKQNLVSWKKVCMPKGDGGLGIRASKDMNKALIAKVGWR 678
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 103 bits (256), Expect = 6e-20
Identities = 45/111 (40%), Positives = 73/111 (65%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
+ F +++ +++R++ W+ KTLSFAG L L K VLSS+P+H+ + + +P SI N +++L
Sbjct: 10 KDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQL 69
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
R F W + + K + V W+ VC PK EGGLG+R +N A + K+GW+
Sbjct: 70 SRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 102 bits (255), Expect = 8e-20
Identities = 44/114 (38%), Positives = 72/114 (63%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
R F +++ + +L +WKA TL+ AG IL++ L+S+P +T + +P+S CND++++
Sbjct: 1236 RHTFSSVVEKMRKKLATWKASTLNMAGRRILVQSSLASVPTYTMQALALPVSTCNDVDKI 1295
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQAST 358
RNF W + + KI+ VNW+ +C P+ GGLG+R + N A L K+ WQ T
Sbjct: 1296 CRNFLWGHTDNTKKIHTVNWSHICRPRQMGGLGLRTARDFNMAFLTKMAWQIFT 1349
>ref|XP_011457336.1| PREDICTED: uncharacterized protein LOC105349397 [Fragaria vesca
subsp. vesca]
Length = 806
Score = 102 bits (255), Expect = 8e-20
Identities = 48/105 (45%), Positives = 68/105 (64%)
Frame = +2
Query: 35 LIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERLMRNFQW 214
L++ + RL SWK+ TLS AG LI+ V + +P++T V +P+SICN ++RL NF W
Sbjct: 613 LVEKVQLRLASWKSHTLSMAGRHTLIQSVTAGLPVYTMQSVKLPMSICNTLDRLNMNFLW 672
Query: 215 PGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
+ + KI+ V W+ VC PK GGLG++K S VN A L K GW+
Sbjct: 673 GHTEEKKKIHLVKWDTVCKPKRYGGLGLKKSSCVNQALLAKTGWR 717
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 102 bits (254), Expect = 1e-19
Identities = 48/115 (41%), Positives = 68/115 (59%)
Frame = +2
Query: 5 GTPKRQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICND 184
G ++++ YL+D IN +L WK KTLS AG LI+ SSIP +T +P S C+D
Sbjct: 764 GRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDD 823
Query: 185 IERLMRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
I+R R+F W +++ V W + K EGGLGIR + + N A L+KLGW+
Sbjct: 824 IDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWR 878
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 102 bits (253), Expect = 1e-19
Identities = 44/111 (39%), Positives = 72/111 (64%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
R F +ID + +L+SWKA +L+ AG +L++ L+++P +T V+ +P+S CN+I++
Sbjct: 1298 RNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKT 1357
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
RNF W + K++ VNW +C P++EGGLG+R + N A L K+ WQ
Sbjct: 1358 CRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQ 1408
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 102 bits (253), Expect = 1e-19
Identities = 44/111 (39%), Positives = 72/111 (64%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
R F +ID + +L+SWKA +L+ AG +L++ L+++P +T V+ +P+S CN+I++
Sbjct: 766 RNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKT 825
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
RNF W + K++ VNW +C P++EGGLG+R + N A L K+ WQ
Sbjct: 826 CRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQ 876
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 102 bits (253), Expect = 1e-19
Identities = 44/111 (39%), Positives = 72/111 (64%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
R F +ID + +L+SWKA +L+ AG +L++ L+++P +T V+ +P+S CN+I++
Sbjct: 766 RNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKT 825
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
RNF W + K++ VNW +C P++EGGLG+R + N A L K+ WQ
Sbjct: 826 CRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQ 876
>ref|XP_007039838.1| RNA-directed DNA polymerase (Reverse transcriptase),
Polynucleotidyl transferase, Ribonuclease H fold-like
protein [Theobroma cacao] gi|508777083|gb|EOY24339.1|
RNA-directed DNA polymerase (Reverse transcriptase),
Polynucleotidyl transferase, Ribonuclease H fold-like
protein [Theobroma cacao]
Length = 616
Score = 101 bits (252), Expect = 2e-19
Identities = 47/118 (39%), Positives = 72/118 (61%)
Frame = +2
Query: 5 GTPKRQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICND 184
G + F +L D + ++L+ WKA +LSFAG L L+K VLS+IP + +V IP+ C
Sbjct: 59 GRKRITSFKFLEDKVRSKLSGWKAFSLSFAGILTLVKSVLSTIPYYVMQIVSIPLDSCKR 118
Query: 185 IERLMRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQAST 358
+ER +NF W G +I+ + N +C PK E LG++++ +N+A L+KL WQ T
Sbjct: 119 MERYCQNFLWGGDADHKRIHLIRCNQICRPKEERSLGVKRLHVMNNAFLMKLLWQLVT 176
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1235
Score = 101 bits (251), Expect = 2e-19
Identities = 45/111 (40%), Positives = 71/111 (63%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
++ F +++ ++++L WK K LS AG + L K V+SSIP+HT + + +P S ++++
Sbjct: 625 KETFGEVVEKVSSKLAGWKRKFLSLAGRITLTKSVISSIPVHTMSTIALPASTLGQLDKI 684
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
R+F W S + K + + W +C PK EGGLGIRK E+N A L KLGW+
Sbjct: 685 ARSFIWGSSEGNRKQHLIAWEKICTPKREGGLGIRKAKEMNVALLGKLGWR 735
>ref|XP_011459751.1| PREDICTED: uncharacterized protein LOC105350077 [Fragaria vesca
subsp. vesca]
Length = 704
Score = 100 bits (249), Expect = 4e-19
Identities = 43/102 (42%), Positives = 67/102 (65%)
Frame = +2
Query: 41 DTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERLMRNFQWPG 220
D + RL+SWK+K LSFAG L L++ V S+IP++ P S+C+ +++L R+F W
Sbjct: 353 DKVQKRLSSWKSKVLSFAGRLTLVQSVTSAIPMYAMQTTKFPFSLCDKLDKLNRDFIWGD 412
Query: 221 SGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGW 346
+++ VNW+ +C PK GGLGI+K +++N A L K+GW
Sbjct: 413 VENKKRVHLVNWDTICQPKYLGGLGIKKTADMNQAMLSKIGW 454
>ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 768
Score = 100 bits (248), Expect = 5e-19
Identities = 49/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 5 GTPKRQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICND 184
G PKR L D A+LT WK K LS AG + L + V S+ +H+ +V P S+
Sbjct: 187 GKPKRSHLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRY 246
Query: 185 IERLMRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGW 346
+ R RNF W G S K+ V+W+ +C PK+EGGLG+R + +N LLKLGW
Sbjct: 247 LSRCARNFIWSGDVTSKKLVTVSWHQICAPKNEGGLGLRDLGSLNTTALLKLGW 300
>ref|XP_010668235.1| PREDICTED: uncharacterized protein LOC104885230 [Beta vulgaris subsp.
vulgaris]
Length = 1607
Score = 99.4 bits (246), Expect = 8e-19
Identities = 47/113 (41%), Positives = 71/113 (62%)
Frame = +2
Query: 11 PKRQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIE 190
P R+Q +++D + ARL +WK+K LS AG L LI LS+IP + + +PIS +D++
Sbjct: 1019 PTRRQVQFIVDKVRARLATWKSKFLSRAGRLCLISSTLSTIPAYYMQAISLPISTLSDLD 1078
Query: 191 RLMRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
+ NF W G+ K++ VN + LPK++GGLGIR +N A + KLGW+
Sbjct: 1079 SICNNFLWGEEGEKKKMHLVNKQMTFLPKNKGGLGIRSQRIMNKAYMAKLGWK 1131
>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
Length = 1834
Score = 99.4 bits (246), Expect = 8e-19
Identities = 46/111 (41%), Positives = 70/111 (63%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
++ F +I+ ++++L WK + LS AG + L K VLSSIP+HT + + +P+S N ++++
Sbjct: 1224 KETFGTIIERMSSKLAGWKRRFLSLAGRITLTKSVLSSIPVHTMSSIALPMSTLNQLDKI 1283
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
R+F W K + V W VC P+ EGGLGIR E+N A L KLGW+
Sbjct: 1284 ARSFIWGSVDGDRKQHLVAWEKVCKPRREGGLGIRSAKEMNIALLAKLGWR 1334
>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
[Brassica rapa]
Length = 1638
Score = 99.4 bits (246), Expect = 8e-19
Identities = 45/111 (40%), Positives = 70/111 (63%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
++ F +I+ ++++L WK + LS AG + L K VLSS+P+HT + + +P S N ++++
Sbjct: 1188 KETFGAVIEKVSSKLAGWKRRFLSLAGRITLTKSVLSSVPVHTMSTIALPSSTLNQLDKI 1247
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
R F W + K + V+W +C PK EGGLGIR E+N A L KLGW+
Sbjct: 1248 ARAFIWGSIDGTRKQHLVSWEKICKPKREGGLGIRLAKEMNVALLAKLGWR 1298
>gb|AID60103.1| hypothetical protein [Brassica napus]
Length = 620
Score = 99.4 bits (246), Expect = 8e-19
Identities = 45/111 (40%), Positives = 70/111 (63%)
Frame = +2
Query: 17 RQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERL 196
++ F +I+ ++++L WK + LS AG + L K VLSS+P+HT + + +P S N ++++
Sbjct: 10 KETFGAVIEKVSSKLAGWKRRFLSLAGRITLTKSVLSSVPVHTMSTIALPSSTLNQLDKI 69
Query: 197 MRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
R F W + K + V+W +C PK EGGLGIR E+N A L KLGW+
Sbjct: 70 ARAFIWGSIDGTRKQHLVSWEKICKPKREGGLGIRLAKEMNVALLAKLGWR 120
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 99.4 bits (246), Expect = 8e-19
Identities = 44/105 (41%), Positives = 68/105 (64%)
Frame = +2
Query: 35 LIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICNDIERLMRNFQW 214
+++ + RL WK + LS AG + L K VLSSIP+HT + + +P S + ++++ R+F W
Sbjct: 293 ILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLW 352
Query: 215 PGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGWQ 349
S K + ++W VC P+SEGGLGIRK ++N A L K+GW+
Sbjct: 353 GSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWR 397
>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 805
Score = 99.0 bits (245), Expect = 1e-18
Identities = 49/114 (42%), Positives = 64/114 (56%)
Frame = +2
Query: 5 GTPKRQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICND 184
G PKR L D A+LT WK K LS AG + L + V S+ +H+ +V P S+
Sbjct: 187 GKPKRSHLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRX 246
Query: 185 IERLMRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGW 346
+ R RNF W G S K V+W +C PK+EGGLG+R + +N LLKLGW
Sbjct: 247 LSRCARNFIWSGDVTSKKXVTVSWXQICAPKNEGGLGLRDLGSLNTTALLKLGW 300
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 99.0 bits (245), Expect = 1e-18
Identities = 46/114 (40%), Positives = 70/114 (61%)
Frame = +2
Query: 5 GTPKRQQFLYLIDTINARLTSWKAKTLSFAGCLILIKHVLSSIPIHTTAVVPIPISICND 184
G R F ++I+ I +L+ WK + LS AG + L K V+SSIP + IP +IC++
Sbjct: 188 GRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDE 247
Query: 185 IERLMRNFQWPGSGQSTKINYVNWNLVCLPKSEGGLGIRKISEVNDACLLKLGW 346
IE++ R F W S Q K + V+W++ CLPK GGLG ++ +N+A L+K+ W
Sbjct: 248 IEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMKMLW 301