BLASTX nr result

ID: Cinnamomum23_contig00056490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00056490
         (298 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012439110.1| PREDICTED: F-box protein At5g07610 [Gossypiu...    57   4e-06

>ref|XP_012439110.1| PREDICTED: F-box protein At5g07610 [Gossypium raimondii]
           gi|763784308|gb|KJB51379.1| hypothetical protein
           B456_008G214400 [Gossypium raimondii]
          Length = 406

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = -1

Query: 298 GLILCANADSDD-GDKCYVCNPVTKQWVVLPPPPKHGFSSNCNYDVNLALVPDESSDVSV 122
           GL+LC +  S+  G   Y  NP TK + VLPPP +H  S   ++ V+LA  P +S     
Sbjct: 123 GLLLCCSFRSNRLGTPYYTYNPTTKHYTVLPPP-RHSSSGYYSFGVSLAFDPSKS----- 176

Query: 121 SHYKVFLFVTLNYVTKDENEEPLTYMYVHVYSSKTGQW 8
            HYKV          ++ + E L +  V +YSSKTG W
Sbjct: 177 PHYKVICI-------RNYDPELLDHYQVEIYSSKTGPW 207


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