BLASTX nr result

ID: Cinnamomum23_contig00055964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00055964
         (344 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, part...    49   5e-08

>ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, partial [Populus
           trichocarpa] gi|550337696|gb|ERP60135.1| hypothetical
           protein POPTR_0005s01170g, partial [Populus trichocarpa]
          Length = 270

 Score = 48.5 bits (114), Expect(2) = 5e-08
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 96  VWCAHGKLETIELQNNFFLFNFTSSQNLARTRSASPWKIAGHQLALTSWH 245
           +W   G L  ++L N+FFL  F++ ++     S  PW +A H L + SWH
Sbjct: 98  IWKIQGDLNLVDLGNDFFLARFSNKEDRESAMSGGPWMVADHYLTMRSWH 147



 Score = 35.0 bits (79), Expect(2) = 5e-08
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 245 PNFDPLTMVIEQLPVWIMLPRLLTEY 322
           PNFDP    IE++ VWI LP L  EY
Sbjct: 148 PNFDPNVATIEKVAVWIRLPDLAMEY 173


Top