BLASTX nr result
ID: Cinnamomum23_contig00055813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00055813
(418 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_006618141.1| RNA-binding protein [Arthrospira platensis] ... 53 4e-07
ref|WP_014274584.1| RNA-binding protein [Arthrospira platensis] ... 51 2e-06
ref|WP_006670338.1| MULTISPECIES: RNA-binding protein [Arthrospi... 51 3e-06
gb|EKD06505.1| RNP-1 like RNA-binding protein [Arthrospira plate... 51 3e-06
ref|WP_004161448.1| RNA-binding protein [Microcystis aeruginosa]... 47 4e-06
ref|WP_002769876.1| RNA-binding protein [Microcystis aeruginosa]... 47 6e-06
ref|WP_015227980.1| RNA-binding protein [Dactylococcopsis salina... 50 8e-06
>ref|WP_006618141.1| RNA-binding protein [Arthrospira platensis]
gi|647981127|gb|KDR58077.1| RNA-binding protein
[Arthrospira platensis str. Paraca]
Length = 93
Score = 52.8 bits (125), Expect(2) = 4e-07
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -1
Query: 337 RNGGFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRNR 203
R+ GFGFV SE+E AID ++G +W GR++ VN ARPR NR
Sbjct: 40 RSRGFGFVEMSSEDEEKVAIDALDGAEWKGRSLKVNKARPRDNNR 84
Score = 27.7 bits (60), Expect(2) = 4e-07
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 410 ELEAMFCWAGRIVDSFIPIDRITGKKRG 327
+L A F G + S IP DR TG+ RG
Sbjct: 16 DLSAAFAEYGTVKRSMIPTDRETGRSRG 43
>ref|WP_014274584.1| RNA-binding protein [Arthrospira platensis]
gi|291566709|dbj|BAI88981.1| RNA-binding protein
[Arthrospira platensis NIES-39]
Length = 93
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -1
Query: 337 RNGGFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRNR 203
R+ GFGFV SE+E AI+ ++G +W GR++ VN ARPR NR
Sbjct: 40 RSRGFGFVEMSSEDEEKVAINALDGAEWKGRSLKVNKARPRDNNR 84
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 410 ELEAMFCWAGRIVDSFIPIDRITGKKRG 327
+L A F G + S IP DR TG+ RG
Sbjct: 16 DLSAAFAEYGTVKRSMIPTDRETGRSRG 43
>ref|WP_006670338.1| MULTISPECIES: RNA-binding protein [Arthrospira]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding
protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding
protein, rbp-like [Arthrospira sp. PCC 8005]
gi|585305808|emb|CDM95436.1| Glycine-rich RNA-binding
protein, rbp-like [Arthrospira sp. PCC 8005]
Length = 93
Score = 50.8 bits (120), Expect(2) = 3e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -1
Query: 337 RNGGFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRNR 203
R+ GFGFV +E+E KAI+ ++G +W GR++ VN ARPR N+
Sbjct: 40 RSRGFGFVEMVNEDEETKAIEALDGAEWMGRSLKVNKARPRENNK 84
Score = 26.9 bits (58), Expect(2) = 3e-06
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 410 ELEAMFCWAGRIVDSFIPIDRITGKKRG 327
+L +F G + S IP DR TG+ RG
Sbjct: 16 DLSEVFAQYGTVKRSMIPTDRETGRSRG 43
>gb|EKD06505.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 86
Score = 50.8 bits (120), Expect(2) = 3e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -1
Query: 337 RNGGFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRNR 203
R+ GFGFV +E+E KAI+ ++G +W GR++ VN ARPR N+
Sbjct: 33 RSRGFGFVEMVNEDEETKAIEALDGAEWMGRSLKVNKARPRENNK 77
Score = 26.9 bits (58), Expect(2) = 3e-06
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 410 ELEAMFCWAGRIVDSFIPIDRITGKKRG 327
+L +F G + S IP DR TG+ RG
Sbjct: 9 DLSEVFAQYGTVKRSMIPTDRETGRSRG 36
>ref|WP_004161448.1| RNA-binding protein [Microcystis aeruginosa]
gi|389803795|emb|CCI17308.1| putative RNA-binding
protein rbpB [Microcystis aeruginosa PCC 9807]
Length = 100
Score = 47.0 bits (110), Expect(2) = 4e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -1
Query: 328 GFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRN 206
GFGFV S+ E KAI+ ++G +W GR + VN ARPR N
Sbjct: 43 GFGFVEMSSDEEEAKAIETLDGAEWMGRQMKVNKARPREDN 83
Score = 30.4 bits (67), Expect(2) = 4e-06
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 416 KLELEAMFCWAGRIVDSFIPIDRITGKKRG 327
K +L+ +F G +V ++P+D+ TGK RG
Sbjct: 14 KEDLQGVFAEYGTVVRVYLPVDQATGKMRG 43
>ref|WP_002769876.1| RNA-binding protein [Microcystis aeruginosa]
gi|389732378|emb|CCI03686.1| putative RNA-binding
protein rbpB [Microcystis aeruginosa PCC 9443]
Length = 100
Score = 47.0 bits (110), Expect(2) = 6e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -1
Query: 328 GFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRN 206
GFGFV S+ E KAI+ ++G +W GR + VN ARPR N
Sbjct: 43 GFGFVEMSSDEEEAKAIETLDGAEWMGRQMKVNKARPREDN 83
Score = 29.6 bits (65), Expect(2) = 6e-06
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 416 KLELEAMFCWAGRIVDSFIPIDRITGKKRG 327
K +L +F G +V ++P+D+ TGK RG
Sbjct: 14 KEDLHGVFAEYGTVVRVYLPVDQATGKMRG 43
>ref|WP_015227980.1| RNA-binding protein [Dactylococcopsis salina]
gi|428692817|gb|AFZ48967.1| RRM domain-containing
RNA-binding protein [Dactylococcopsis salina PCC 8305]
Length = 99
Score = 50.1 bits (118), Expect(2) = 8e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = -1
Query: 328 GFGFVRFKSENEALKAIDRMNGCKWGGRTIVVNLARPRTRN 206
GFGFV +SE+E + AI+ ++G +W GR + VN ARPRT N
Sbjct: 43 GFGFVELESESEEVSAIEVLDGAEWMGRELRVNKARPRTEN 83
Score = 26.2 bits (56), Expect(2) = 8e-06
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 410 ELEAMFCWAGRIVDSFIPIDRITGKKRG 327
EL +F G + IP+DR TGK RG
Sbjct: 16 ELNEVFADYGTVKRVTIPVDRETGKVRG 43