BLASTX nr result

ID: Cinnamomum23_contig00055720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00055720
         (391 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      69   1e-09
emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]    68   3e-09
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]    65   2e-08
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712...    61   3e-07
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]    60   6e-07
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              59   1e-06
ref|XP_011684310.1| PREDICTED: uncharacterized protein LOC105447...    57   5e-06
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...    56   8e-06

>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
 Frame = -3

Query: 272  EDEIHFSLITSISDPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQARNQLV 93
            E+++  +L  S  DP+T+++A +S E  GW GA  ++MESL KNSV  LVPKP+ R  + 
Sbjct: 768  EEDVSRALSISQGDPTTYEDAIESVESAGWIGAMTEEMESLHKNSVWELVPKPKERKLVG 827

Query: 92   ANECS*KWKYRKKM------TLIFKTHLVVKGYTKR 3
                  KW +RKK        + +K  LV KGY+++
Sbjct: 828  C-----KWVFRKKEGIHEDDAITYKARLVAKGYSQK 858


>emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]
          Length = 605

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
 Frame = -3

Query: 272 EDEIHFSLITSISDPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQARNQLV 93
           ED + ++LITS  DP+TFQEA  S E+  W GA +++++SL KN    LV  P+ + ++ 
Sbjct: 251 EDLVSYALITSNGDPTTFQEAIHSQEKSRWMGAMVEEIQSLHKNQTWDLVKLPEGKREI- 309

Query: 92  ANECS*KWKYRKKMTLI------FKTHLVVKGYTKR 3
              C  KW Y+KK  +       FK  LV KGY+ +
Sbjct: 310 --RC--KWVYKKKKAVSKKDGEKFKARLVEKGYSHK 341


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
 Frame = -3

Query: 272 EDEIHFSLITSISDPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQARNQLV 93
           ED + ++LITS  DP TFQEA  + E+  W GA +++++ L KN    LV  P+ +  + 
Sbjct: 147 EDLVSYALITSSKDPITFQEAIHNQEKSRWMGAMVEEIQFLHKNQTWDLVEPPEGKRAIG 206

Query: 92  ANECS*KWKYRKKMTLI------FKTHLVVKGYTKR 3
                 KW Y+KK  +       FK  LV KGY++R
Sbjct: 207 C-----KWVYKKKEAISKKEGEKFKARLVAKGYSQR 237


>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix dactylifera]
          Length = 2199

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
 Frame = -3

Query: 272  EDEIHFSLITSISDPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQARNQLV 93
            ++ I ++LIT+  D  TF+EA +SSERE W  A MD+MESL+KN    LV  P+      
Sbjct: 909  DETISYTLITANGDSETFEEAIESSERESWMQAMMDEMESLEKNKTWQLVDLPRD----- 963

Query: 92   ANECS*KWKYRKKMT-----LIFKTHLVVKGYTKR 3
            A     KW + K++      +  K  LV KGY++R
Sbjct: 964  AWAIGSKWVFTKEVPSEQGGVRCKARLVAKGYSQR 998


>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
          Length = 815

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/76 (39%), Positives = 45/76 (59%)
 Frame = -3

Query: 272 EDEIHFSLITSISDPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQARNQLV 93
           ED + ++LITS  D +TFQEAK S E+  W G  +++++SL KN    LV  P+ +  + 
Sbjct: 378 EDLVSYALITSSRDSTTFQEAKHSQEKSRWVGVVVEEIQSLHKNQTWDLVELPKGKRAIG 437

Query: 92  ANECS*KWKYRKKMTL 45
                 KW Y+KK T+
Sbjct: 438 C-----KWVYKKKKTV 448


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
 Frame = -3

Query: 272  EDEIHFSLITSISDPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQARNQLV 93
            E  + + L+T   +PSTFQEA  SS+   WT A  +++E+L KN+   LVP PQ R  + 
Sbjct: 767  EGNVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRKPI- 825

Query: 92   ANECS*KWKYRKK-----MTLIFKTHLVVKGYTKR 3
                  KW ++ K         ++  LVVKGY ++
Sbjct: 826  ----GNKWVFKIKRNGDDQVERYRARLVVKGYAQK 856


>ref|XP_011684310.1| PREDICTED: uncharacterized protein LOC105447802 [Wasmannia
           auropunctata]
          Length = 643

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/94 (31%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
 Frame = -3

Query: 275 DEDEIHFSLITSIS-DPSTFQEAKKSSEREGWTGATMDQMESLQKNSV*VLVPKPQ-ARN 102
           +EDEI F+++ +I+ DP ++ EA  S+E+  WT A  ++++S++ N V  +VP+P+ +++
Sbjct: 22  EEDEIMFAMLATINRDPISYSEAMASTEQREWTAAINEELQSMKDNHVWKIVPRPKSSKD 81

Query: 101 QLVANECS*KWKYRKKMT----LIFKTHLVVKGY 12
               N    KW +++K +    + +K  LV+KG+
Sbjct: 82  GKRPNIIDSKWVFKRKTSDDGGIKYKGRLVIKGF 115


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
 Frame = -3

Query: 323 EDEQLEAQYETPRFV*DEDEIHFSLIT----SISDPSTFQEAKKSSEREGWTGATMDQME 156
           +D +    +   RF  +E  + F+L+T    S+ +P ++QEA    E + W  AT ++M+
Sbjct: 36  KDRERREIHPPARFT-EESGVAFALVTVETLSMEEPQSYQEATSDKEWKKWKLATHEEMD 94

Query: 155 SLQKNSV*VLVPKPQARNQLVANECS*KWKYRKKM------TLIFKTHLVVKGYTKR 3
           SL KN   VLV KPQ R  +       +W ++ K        + +K  LV KGYT+R
Sbjct: 95  SLIKNGTWVLVDKPQDRKIIGC-----RWLFKMKSGIPGVEPVRYKARLVAKGYTQR 146


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