BLASTX nr result

ID: Cinnamomum23_contig00055378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00055378
         (491 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009604564.1| PREDICTED: nucleolar protein 58-like [Nicoti...    59   2e-06
ref|XP_009616592.1| PREDICTED: nucleolar protein 58-like [Nicoti...    58   2e-06
ref|XP_009599403.1| PREDICTED: uncharacterized protein LOC104095...    57   4e-06

>ref|XP_009604564.1| PREDICTED: nucleolar protein 58-like [Nicotiana tomentosiformis]
          Length = 294

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = -3

Query: 489 KKEQELQVEKYWKKENSP--NKKVPNYRKKKNSNNKECWTCGETGHFAPDCPKRDKKIER 316
           KK  E    ++ +KE     +KK    R+ K  ++ +CW+CG+TGH A +CP  +KK ++
Sbjct: 104 KKSSEKSKRRHKRKEKKEGASKKRRFKRRSKKEHDDKCWSCGKTGHRANECPVTNKKKKK 163

Query: 315 VNMVEMIIPYADSQDIDILYASELRDIDEESVLTVVTDNSDSDGEEILSSPNSKLDSFSE 136
           VN +E+     D    + L+A  + + +E S  +  +D S SD E+ + +     DS S 
Sbjct: 164 VNTLEI-----DENVKEKLFA--ILEQNENSTSSSSSDESYSDSEDEMINMAYSSDSSSS 216

Query: 135 DSYEN 121
              +N
Sbjct: 217 SKEDN 221


>ref|XP_009616592.1| PREDICTED: nucleolar protein 58-like [Nicotiana tomentosiformis]
          Length = 361

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
 Frame = -3

Query: 465 EKYWKKENSPNKKVPNYRKKKNSNNKECWTCGETGHFAPDCPKRDKKIERVNMVEMIIPY 286
           E+  KKE +P KK    R KK   +K  W+CG+ GH A +CP  +KK ++VN +E+    
Sbjct: 150 ERKEKKEGTPKKKRFKRRSKKEHGDKR-WSCGKIGHRANECPVTNKKNKKVNTLEI---- 204

Query: 285 ADSQDIDILYASELRDIDEESVLTVVTDN--SDSDGEEILSSPNSKLDSFSEDSYENIRL 112
                 + L+A  + + ++++ L+  +D   SDSD E I  + +S   S S++    I+ 
Sbjct: 205 -HENTKETLFA--ILEQNDKNTLSSSSDESYSDSDDEVINMAYSSYSSSSSKEDNNEIKA 261

Query: 111 NTVRIEGIE 85
             +R++ IE
Sbjct: 262 VKLRLDKIE 270


>ref|XP_009599403.1| PREDICTED: uncharacterized protein LOC104095057, partial [Nicotiana
           tomentosiformis]
          Length = 337

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/111 (32%), Positives = 59/111 (53%)
 Frame = -3

Query: 453 KKENSPNKKVPNYRKKKNSNNKECWTCGETGHFAPDCPKRDKKIERVNMVEMIIPYADSQ 274
           K+E +P K+    R KK   +K CW+CG+TGH A +CP  +KK ++VN +E+     D  
Sbjct: 228 KRERTPKKRRFKRRSKKEHGDK-CWSCGKTGHRANECPVTNKKKKKVNTLEL-----DEN 281

Query: 273 DIDILYASELRDIDEESVLTVVTDNSDSDGEEILSSPNSKLDSFSEDSYEN 121
             + L+A  + + +E S  +  +D S SD +  + +     DS S    +N
Sbjct: 282 IKEKLFA--ILEQNENSTSSSSSDESYSDSDNEMINMAYSSDSSSSSQEDN 330


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