BLASTX nr result

ID: Cinnamomum23_contig00055351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00055351
         (410 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          47   5e-06
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...    42   7e-06

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 46.6 bits (109), Expect(2) = 5e-06
 Identities = 19/44 (43%), Positives = 30/44 (68%)
 Frame = -2

Query: 409 KSTLIFFFMSKADTYNCVNSSALELITHIMKLWEKIVEQLFMKE 278
           KSTL+  + +K D  +C N   ++L+TH MKLWE+++E+   KE
Sbjct: 112 KSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKE 155



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 15/44 (34%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
 Frame = -1

Query: 182 EKSLLIICINLNMAYDRLPRQLI*WKLKKEI---INYIKIMGDI 60
           ++ L ++ I+L  AYDR+PR+++ WK+ +++   I YI+ + D+
Sbjct: 189 KRDLHMVFIDLEKAYDRVPREVL-WKVLEKMRVRIAYIRAIKDM 231


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
           chalumnae]
          Length = 1500

 Score = 42.0 bits (97), Expect(2) = 7e-06
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = -2

Query: 409 KSTLIFFFMSKADTYNCVNSSALELITHIMKLWEKIVEQLFMK 281
           +STL+  F  K D  +C N   + L++H MKLWE+I+E+   K
Sbjct: 419 ESTLVPVFKRKGDVQDCNNYRGIALMSHAMKLWERIIEKRLRK 461



 Score = 34.3 bits (77), Expect(2) = 7e-06
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = -1

Query: 179 KSLLIICINLNMAYDRLPRQLI*WKLKKEIIN--YIKIMGDIMNSFK 45
           K L ++ ++L  AYDR+PR LI W ++K  I   YI+++ D+    K
Sbjct: 497 KDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSK 543


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