BLASTX nr result
ID: Cinnamomum23_contig00054567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00054567
(432 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010030649.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 72 2e-18
ref|XP_009596859.1| PREDICTED: uncharacterized protein LOC104092... 62 1e-17
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 66 5e-17
gb|AAK51580.1|AC022352_16 Putative retroelement [Oryza sativa Ja... 66 5e-17
gb|ABB47095.2| retrotransposon protein, putative, Ty3-gypsy subc... 66 5e-17
ref|XP_012575125.1| PREDICTED: uncharacterized protein LOC101508... 68 6e-17
gb|AAT85792.1| reverse transcriptase (RNA-dependent DNA polymera... 67 6e-17
gb|AAK92650.1|AC079634_11 Putative retroelement [Oryza sativa Ja... 67 6e-17
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera] 74 6e-17
gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group] 64 8e-17
gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group] 65 1e-16
gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 1e-16
emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group] 65 1e-16
emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group] 66 2e-16
emb|CAH66206.1| OSIGBa0096F13.1 [Oryza sativa Indica Group] 66 2e-16
emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group] 66 2e-16
gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa] gi... 66 2e-16
gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subc... 66 2e-16
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc... 66 2e-16
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 64 2e-16
>ref|XP_010030649.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104420520 [Eucalyptus grandis]
Length = 945
Score = 72.0 bits (175), Expect(2) = 2e-18
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = -3
Query: 430 NNCQRRWMEYIKDYDFPVKYHHGKANVVADALSRKLT--LVSFLAAEGVWIDVFRVLDVQ 257
N QRRW+E +KDYD + YH GKANVVA+ALSRK + + + L ++ ++ R LD++
Sbjct: 259 NMRQRRWLELLKDYDLSINYHPGKANVVANALSRKSSGNMAALLTSQKPTLEDMRKLDLE 318
Query: 256 FQPLSEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHID 131
G A + EP L+ ++K + DPQL ++ E ++
Sbjct: 319 VLVHQLGAQLANLRV-EPTLIDRIKAKQNEDPQLKKIKEGVE 359
Score = 46.6 bits (109), Expect(2) = 2e-18
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -1
Query: 111 IGGVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
+ G L ++ RLCVP+ ELK+EIL +AH +R+SIH G
Sbjct: 370 VDGSLRFRGRLCVPNDSELKKEILQEAHSTRFSIHPG 406
>ref|XP_009596859.1| PREDICTED: uncharacterized protein LOC104092880 [Nicotiana
tomentosiformis]
Length = 1101
Score = 62.0 bits (149), Expect(2) = 1e-17
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRK-LTLVSFLAAEGVWIDVF--RVLDVQFQ 251
QRRW+E +KDYD + YH GKAN+VADALS+K + +S + A+ V + + ++ +Q +
Sbjct: 941 QRRWLELLKDYDVDILYHPGKANIVADALSQKSMGSLSHVEADKVKMTKYLCQLASLQVR 1000
Query: 250 PL-SEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQR 125
+ +EG + + + +VK+ + DP+L+++ E I Q+
Sbjct: 1001 LVDAEGGRILVQNTAKSSFVTEVKERQHEDPELIKLKESIPQQ 1043
Score = 53.9 bits (128), Expect(2) = 1e-17
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -1
Query: 120 FRLIG-GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
F L G GVL YQ RLCVP + EL+ +ILS+AH+SRY++H G
Sbjct: 1048 FELTGDGVLRYQGRLCVPSVGELRAKILSEAHYSRYAVHPG 1088
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 65.9 bits (159), Expect(2) = 5e-17
Identities = 39/99 (39%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLD-VQFQPL 245
QRRW+E IKDYD + YH GKANVVADALSRK + + L G+ ++ + ++ + +
Sbjct: 1890 QRRWLELIKDYDVGIHYHPGKANVVADALSRK-SHCNTLGVRGIPPELNQQMEALNLSIV 1948
Query: 244 SEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
S G L AT+ A +P LL ++++++ +DP + +++++ Q
Sbjct: 1949 SRGFL-ATLEA-KPTLLDQIREAQKNDPDMRGLLKNMKQ 1985
Score = 48.1 bits (113), Expect(2) = 5e-17
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G L+ ++R+CVPD++ELK+ IL +AH S YSIH G
Sbjct: 1997 GTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPG 2031
>gb|AAK51580.1|AC022352_16 Putative retroelement [Oryza sativa Japonica Group]
Length = 1023
Score = 65.9 bits (159), Expect(2) = 5e-17
Identities = 39/99 (39%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLD-VQFQPL 245
QRRW+E IKDYD + YH GKANVVADALSRK + + L G+ ++ + ++ + +
Sbjct: 466 QRRWLELIKDYDVGIHYHPGKANVVADALSRK-SHCNTLGVRGIPPELNQQMEALNLSIV 524
Query: 244 SEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
S G L AT+ A +P LL ++++++ +DP + +++++ Q
Sbjct: 525 SRGFL-ATLEA-KPTLLDQIREAQKNDPDMRGLLKNMKQ 561
Score = 48.1 bits (113), Expect(2) = 5e-17
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G L+ ++R+CVPD++ELK+ IL +AH S YSIH G
Sbjct: 573 GTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPG 607
>gb|ABB47095.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 998
Score = 65.9 bits (159), Expect(2) = 5e-17
Identities = 39/99 (39%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLD-VQFQPL 245
QRRW+E IKDYD + YH GKANVVADALSRK + + L G+ ++ + ++ + +
Sbjct: 441 QRRWLELIKDYDVGIHYHPGKANVVADALSRK-SHCNTLGVRGIPPELNQQMEALNLSIV 499
Query: 244 SEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
S G L AT+ A +P LL ++++++ +DP + +++++ Q
Sbjct: 500 SRGFL-ATLEA-KPTLLDQIREAQKNDPDMRGLLKNMKQ 536
Score = 48.1 bits (113), Expect(2) = 5e-17
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G L+ ++R+CVPD++ELK+ IL +AH S YSIH G
Sbjct: 548 GTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPG 582
>ref|XP_012575125.1| PREDICTED: uncharacterized protein LOC101508115 [Cicer arietinum]
Length = 1870
Score = 68.2 bits (165), Expect(2) = 6e-17
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Frame = -3
Query: 430 NNCQRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWI-----DVFRVL 266
N QRRWME++KD+DF +KYH GKANVVADALSRK VS L + + D+ V
Sbjct: 951 NMRQRRWMEFLKDFDFELKYHPGKANVVADALSRKTLSVSALMVKHSELLEQFRDLSLVC 1010
Query: 265 DVQFQPLSEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
+V + + G+L T LL +++ S+ D L+ ++ IDQ
Sbjct: 1011 EVTPKSIKLGMLKVTSG-----LLEEIEKSQKLDIYLLDKLQSIDQ 1051
Score = 45.4 bits (106), Expect(2) = 6e-17
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -1
Query: 111 IGGVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
+ G+L +++R+CVPD++EL++ IL + H S SIH G
Sbjct: 1061 VDGILRFKERICVPDVEELRKMILEEGHRSCLSIHPG 1097
>gb|AAT85792.1| reverse transcriptase (RNA-dependent DNA polymerase) family protein
[Oryza sativa Japonica Group] gi|108709088|gb|ABF96883.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1708
Score = 66.6 bits (161), Expect(2) = 6e-17
Identities = 37/98 (37%), Positives = 63/98 (64%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L G+ +++ + ++ +
Sbjct: 1229 QRRWLELIKDYDVGIHYHPGKANVVADALSRK-SHCNTLNVRGIPLELNQQMEALNLSIV 1287
Query: 241 EGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
AT+ A +P LL ++++++ +DP L +++++ Q
Sbjct: 1288 GRGFLATLEA-KPTLLDQIREAQKNDPDLHGLLKNMKQ 1324
Score = 47.0 bits (110), Expect(2) = 6e-17
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G L+ +R+CVPD++ELK+ IL +AH S YSIH G
Sbjct: 1336 GTLWNGNRVCVPDVRELKQLILQEAHESPYSIHPG 1370
>gb|AAK92650.1|AC079634_11 Putative retroelement [Oryza sativa Japonica Group]
gi|31431383|gb|AAP53171.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1109
Score = 66.6 bits (161), Expect(2) = 6e-17
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 769 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCIEGMCEE----LQQEFEHLN 823
Query: 241 EGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ F P L+ +V+ ++ +DP++ +
Sbjct: 824 VGIVEQGFVAALEARPTLVDQVRAAQVNDPEIAEL 858
Score = 47.0 bits (110), Expect(2) = 6e-17
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ ++RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 876 GTIWLRERLCVPDDKELKDLILTEAHQTQYSIHLG 910
>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
Length = 984
Score = 73.6 bits (179), Expect(2) = 6e-17
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = -3
Query: 430 NNCQRRWMEYIKDYDFPVKYHHGKANVVADALSRKL--TLVSFLAAEGVWIDVFRVLDVQ 257
N QRRW+E +KDYD+ ++YH KANVVADALSRK +L + + ++ R L V
Sbjct: 436 NMRQRRWIELLKDYDYIIQYHSRKANVVADALSRKSVGSLTAIRGCQRQLLEDLRSLQVH 495
Query: 256 FQPLSEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHI 134
+ L G L A +P+L+G++K + +D LV+++E +
Sbjct: 496 MRVLDSGALIANFRV-QPDLVGRIKALQKNDLNLVQLMEEV 535
Score = 40.0 bits (92), Expect(2) = 6e-17
Identities = 15/33 (45%), Positives = 26/33 (78%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIH 7
G+L + RLCVP+ ++L+ E+L +AH S+++IH
Sbjct: 549 GILRFGTRLCVPNDEDLRRELLEEAHCSKFAIH 581
>gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1474
Score = 63.5 bits (153), Expect(2) = 8e-17
Identities = 37/99 (37%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLD-VQFQPL 245
QRRW+E IKDYD + YH GKANVVADALSRK + + L G+ ++ + ++ + +
Sbjct: 917 QRRWLELIKDYDVGIHYHPGKANVVADALSRK-SHCNTLNVRGIPPELNQQMEALNLSIV 975
Query: 244 SEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
S G L A + +P LL ++++++ +DP + +++++ Q
Sbjct: 976 SRGFLAALEA--KPTLLDQIREAQKNDPDMHGLLKNMKQ 1012
Score = 49.7 bits (117), Expect(2) = 8e-17
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G L+ +R+CVPD++ELK+ IL +AH SRYSIH G
Sbjct: 1024 GTLWNGNRVCVPDVRELKQLILQEAHESRYSIHPG 1058
>gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1495
Score = 65.5 bits (158), Expect(2) = 1e-16
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Frame = -3
Query: 430 NNCQRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQ 251
N C+RRW+E IKDYD + YH GKANVVADALSRK + + L E D+ L +
Sbjct: 935 NRCERRWLELIKDYDMGIHYHPGKANVVADALSRK-SYCNALCTE----DMCGKLQQDLE 989
Query: 250 PLSEGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
L+ G++ + P L+ +V+ ++ +DP++ +
Sbjct: 990 HLNLGIVEHGYVAALEARPTLVDQVRAAQVNDPEIAEL 1027
Score = 47.4 bits (111), Expect(2) = 1e-16
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ ++RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1045 GTIWLRERLCVPDDKELKDLILTEAHQTQYSIHPG 1079
>gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 65.1 bits (157), Expect(2) = 1e-16
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ ++ + L+ L
Sbjct: 855 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCNALCTEGMCKELQQELEHLNLGLV 913
Query: 241 EGVLFATMSAWEPELLGKVKDSKCSDPQLVRV 146
E A + A P L+ +V+ ++ +DP++ +
Sbjct: 914 EYGYVAVLEA-RPTLVDQVRAAQVNDPEIAEL 944
Score = 47.8 bits (112), Expect(2) = 1e-16
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G +++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 962 GTIWFGERLCVPDDKELKDLILTEAHQTQYSIHPG 996
>emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group]
Length = 1639
Score = 65.5 bits (158), Expect(2) = 1e-16
Identities = 37/98 (37%), Positives = 62/98 (63%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L G+ ++ + L+ +
Sbjct: 1141 QRRWLELIKDYDVGIHYHPGKANVVADALSRK-SHCNTLGVRGIPPELNQQLEALNLSIV 1199
Query: 241 EGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQ 128
AT+ A +P LL ++++++ +DP + +++++ Q
Sbjct: 1200 GRGFLATLEA-KPTLLDQIREAQKNDPDMHGLLKNMKQ 1236
Score = 47.0 bits (110), Expect(2) = 1e-16
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G L+ +R+CVPD++ELK+ IL +AH S YSIH G
Sbjct: 1248 GTLWNGNRVCVPDVRELKQLILQEAHESPYSIHPG 1282
>emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group]
Length = 1827
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 1270 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCIEGMCEE----LRQEFEHLN 1324
Query: 241 EGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ F P L+ +V+ ++ +DP++ +
Sbjct: 1325 MGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAEL 1359
Score = 46.2 bits (108), Expect(2) = 2e-16
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1377 GTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPG 1411
>emb|CAH66206.1| OSIGBa0096F13.1 [Oryza sativa Indica Group]
Length = 1827
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 1270 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCIEGMCEE----LRQEFEHLN 1324
Query: 241 EGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ F P L+ +V+ ++ +DP++ +
Sbjct: 1325 MGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAEL 1359
Score = 46.2 bits (108), Expect(2) = 2e-16
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1377 GTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPG 1411
>emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group]
Length = 1827
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 1270 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCIEGMCEE----LRQEFEHLN 1324
Query: 241 EGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ F P L+ +V+ ++ +DP++ +
Sbjct: 1325 MGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAEL 1359
Score = 46.2 bits (108), Expect(2) = 2e-16
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1377 GTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPG 1411
>gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa]
gi|21321760|gb|AAM47295.1|AC122146_14 Putative
polyprotein [Oryza sativa Japonica Group]
gi|31430576|gb|AAP52470.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1819
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 1262 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCTEGMCEE----LRQEFEHLN 1316
Query: 241 EGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ F P L+ +V+ ++ +DP++ +
Sbjct: 1317 IGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAEL 1351
Score = 46.2 bits (108), Expect(2) = 2e-16
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1369 GTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPG 1403
>gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 1220 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCIEGMCEE----LRQEFEHLN 1274
Query: 241 EGVL---FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ F P L+ +V+ ++ +DP++ +
Sbjct: 1275 MGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAEL 1309
Score = 46.2 bits (108), Expect(2) = 2e-16
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1327 GTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPG 1361
>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1687
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEGVWIDVFRVLDVQFQPLS 242
QRRW+E IKDYD + YH GKANVVADALSRK + + L EG+ + L +F+ L+
Sbjct: 1176 QRRWLELIKDYDMSIHYHPGKANVVADALSRK-SYCTALCIEGMCEE----LRQEFEHLN 1230
Query: 241 EGVL----FATMSAWEPELLGKVKDSKCSDPQLVRV 146
G++ A + AW P L+ +V+ ++ +D ++ +
Sbjct: 1231 VGIVEHGFVAALEAW-PTLVDQVRAAQVNDSEIAEL 1265
Score = 46.2 bits (108), Expect(2) = 2e-16
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
G ++ +RLCVPD +ELK+ IL++AH ++YSIH G
Sbjct: 1283 GTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPG 1317
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 63.5 bits (153), Expect(2) = 2e-16
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Frame = -3
Query: 421 QRRWMEYIKDYDFPVKYHHGKANVVADALSRKLTLVSFLAAEG---VWIDVFRV--LDVQ 257
QRRW+E +KDYD + YH GKANVVAD+LSR + EG + D+ R+ L V+
Sbjct: 1044 QRRWLELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVR 1103
Query: 256 FQPLSEGVLFATMSAWEPELLGKVKDSKCSDPQLVRVIEHIDQRPV 119
F +EG + T A E L+ +VK+ + DP L+ + ++ ++ V
Sbjct: 1104 FTDSTEGGIAVTSKA-ESSLMSEVKEKQDQDPILLELKANVQKQRV 1148
Score = 48.5 bits (114), Expect(2) = 2e-16
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1
Query: 105 GVLYYQDRLCVPDIQELKEEILSDAHHSRYSIHSG 1
GVL YQ RLCVP + L+E ++ +AH SRYS+H G
Sbjct: 1157 GVLRYQGRLCVPMVDGLQERVMEEAHSSRYSVHPG 1191