BLASTX nr result

ID: Cinnamomum23_contig00054327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00054327
         (796 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]     77   1e-11
ref|XP_010270824.1| PREDICTED: uncharacterized protein LOC104607...    59   3e-06

>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 77/266 (28%), Positives = 106/266 (39%), Gaps = 55/266 (20%)
 Frame = -2

Query: 702 FVQLPKHESTKHSPRAAICIFLSHGIGYKCYQRCNGMACCQP---PLYFQTYDILLELVT 532
           FV  P+ E +K S R+AIC+FL +G G K Y+      C  P    LY   + + LE + 
Sbjct: 228 FVLRPQVERSKLSSRSAICVFLGYGDGQKGYR------CYDPHARKLYVSRHVVFLEHIP 281

Query: 531 FYSLL----------------------TGCLCP*SFCSSNT------------------- 475
           FYS                        T   C    C +NT                   
Sbjct: 282 FYSFSSESSITNSSELTHIDPFGPNDSTSSDCNVENCRTNTTTPDDDITLVPPTAQPPPA 341

Query: 474 -------KLPSLHLHSHFSPWF----YGFELIHFVLDASQLLHVAIYLWP**TPHHPLWQ 328
                  + PS H  S   P F    Y    + F+     L   + Y         PLWQ
Sbjct: 342 IVDPPPPRYPSRHRKSTQLPDFVYSTYSASFVSFLSSIHSLSEPSSYEE---AILDPLWQ 398

Query: 327 TTMAKELVALKKTHTGDLIQLLQS**ASGFQ*VYKLKPKPTCPSINGKLVSSPKGTNKKY 148
             MA+EL AL+KT T DL+ L     A G + VYK+K K        K     KG +++Y
Sbjct: 399 QAMAEELFALRKTDTWDLVPLPPGKRAIGSRWVYKIKTKSDGSVERYKARLVAKGFSQQY 458

Query: 147 RIDYDKTFALATEMTSAREVIMCMSM 70
            +DY++TFA   +MT+ R +I   S+
Sbjct: 459 GMDYEETFAPVAKMTTIRTLIAVASI 484


>ref|XP_010270824.1| PREDICTED: uncharacterized protein LOC104607033 [Nelumbo nucifera]
          Length = 482

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 44/85 (51%)
 Frame = -2

Query: 339 PLWQTTMAKELVALKKTHTGDLIQLLQS**ASGFQ*VYKLKPKPTCPSINGKLVSSPKGT 160
           PLWQ  M  E+ AL  THT DL+ L       G + VYK+K +        K     KG 
Sbjct: 390 PLWQKAMVDEIQALTSTHTWDLVDLPPDKSVIGCKWVYKIKTRADGSIERYKARLVAKGF 449

Query: 159 NKKYRIDYDKTFALATEMTSAREVI 85
            ++Y IDYD+TFA    +TS R +I
Sbjct: 450 TQEYGIDYDETFASVARLTSVRSLI 474


Top