BLASTX nr result
ID: Cinnamomum23_contig00054321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00054321
(414 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011025766.1| PREDICTED: U1 small nuclear ribonucleoprotei... 67 4e-09
ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Popu... 62 1e-07
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 62 2e-07
ref|XP_009350000.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 1e-06
ref|XP_009356694.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 1e-06
ref|XP_009356693.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 1e-06
ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 1e-06
ref|XP_012072035.1| PREDICTED: U1 small nuclear ribonucleoprotei... 58 3e-06
ref|XP_012072033.1| PREDICTED: U1 small nuclear ribonucleoprotei... 58 3e-06
ref|XP_010254879.1| PREDICTED: U1 small nuclear ribonucleoprotei... 57 4e-06
gb|KDO79520.1| hypothetical protein CISIN_1g010771mg [Citrus sin... 57 5e-06
gb|KDO79518.1| hypothetical protein CISIN_1g010771mg [Citrus sin... 57 5e-06
ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citr... 57 5e-06
ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citr... 57 5e-06
>ref|XP_011025766.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Populus
euphratica]
Length = 495
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 19/87 (21%)
Frame = -1
Query: 327 DSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLES------YDHYERH-CLGQLDP 169
+SKHE+DR G ER+YD EPE DR WY HPE RL YDHYE H GQ DP
Sbjct: 382 ESKHERDRLG--ERDYDHAEPEDDRGWYEHPEQGQRLPDAENDPRYDHYEHHRSRGQYDP 439
Query: 168 DD------------EQERYEGIELDDY 124
D +++RY+ +E DDY
Sbjct: 440 MDVQGDHDRYDQYPDRDRYDQMEDDDY 466
>ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
gi|550334743|gb|EEE90671.2| hypothetical protein
POPTR_0007s12690g [Populus trichocarpa]
Length = 497
Score = 62.0 bits (149), Expect = 1e-07
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Frame = -1
Query: 327 DSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLES------YDHYERH-CLGQLDP 169
+SKHE+DR G ER+YD EPE DR WY PE RL YDHYE H G DP
Sbjct: 382 ESKHERDRLG--ERDYDHAEPEDDRGWYEQPEQGQRLPDAENDPRYDHYEHHRSRGPYDP 439
Query: 168 DD---EQERYEGIELDDYQDRFD 109
D +Q+RY+ D+ DR+D
Sbjct: 440 MDVQGDQDRYDQYPDRDH-DRYD 461
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 61.6 bits (148), Expect = 2e-07
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 20/89 (22%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLES------YDHYERHCLGQLD- 172
V+SKHE+DR ER+Y+ EPE D WY PE +R + YDHYE GQ D
Sbjct: 391 VESKHERDRRA--ERDYEHAEPEDDSGWYEQPEQGHRRQDAEHDQRYDHYEHRSRGQFDN 448
Query: 171 -------------PDDEQERYEGIELDDY 124
PD +++RY+ I+ DDY
Sbjct: 449 MDGHGDHDRYDQYPDHDRDRYDRIDEDDY 477
>ref|XP_009350000.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Pyrus x
bretschneideri]
Length = 527
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 18/87 (20%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWY-------GHPEPENRLESYDHYERHCLGQLD 172
++SKHE+ R GDRER YD PE D+ W+ H EP++ +E Y+H+ R QLD
Sbjct: 406 IESKHERARHGDRERGYDHTAPEDDQGWFEQPGHGHRHSEPDDDVEPYEHH-RSQYDQLD 464
Query: 171 -----------PDDEQERYEGIELDDY 124
PD +RY+ +E DDY
Sbjct: 465 VQHDDDRYKQYPDRAHDRYDRMEEDDY 491
>ref|XP_009356694.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Pyrus x bretschneideri]
Length = 517
Score = 58.9 bits (141), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 18/87 (20%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWY-------GHPEPENRLESYDHYERHCLGQLD 172
++SKHE+ R GDRER YD PE D+ W+ H EP++ +E Y+H+ R QLD
Sbjct: 396 IESKHERVRHGDRERGYDHTAPEDDQGWFEQPGHGHRHSEPDDDVEPYEHH-RSQYDQLD 454
Query: 171 -----------PDDEQERYEGIELDDY 124
PD +RY+ +E DDY
Sbjct: 455 VQHDDDRYKQYPDRAHDRYDRMEEDDY 481
>ref|XP_009356693.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X1 [Pyrus x bretschneideri]
Length = 517
Score = 58.9 bits (141), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 18/87 (20%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWY-------GHPEPENRLESYDHYERHCLGQLD 172
++SKHE+ R GDRER YD PE D+ W+ H EP++ +E Y+H+ R QLD
Sbjct: 396 IESKHERVRHGDRERGYDHTAPEDDQGWFEQPGHGHRHSEPDDDVEPYEHH-RSQYDQLD 454
Query: 171 -----------PDDEQERYEGIELDDY 124
PD +RY+ +E DDY
Sbjct: 455 VQHDDDRYKQYPDRAHDRYDRMEEDDY 481
>ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Fragaria
vesca subsp. vesca]
Length = 509
Score = 58.9 bits (141), Expect = 1e-06
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLESYD----HYERHCL---GQLD 172
V+SKHE+DR G+RER+YD PE D+ W+ PE +R D HYER LD
Sbjct: 391 VESKHERDRHGERERDYDPAAPEDDQAWFEQPEHGHRHSDPDHDPEHYERRRSKYDDHLD 450
Query: 171 PDDEQERYEGIELDDYQDRFD 109
+ + +RY+ Y DR+D
Sbjct: 451 TEHDHDRYK-----QYPDRYD 466
>ref|XP_012072035.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform X2
[Jatropha curcas]
Length = 503
Score = 57.8 bits (138), Expect = 3e-06
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLES------YDHYERH-CLGQLD 172
V+SKHE+DR ER+Y+ EPE DR WY PE + + YDHYE H G+ D
Sbjct: 387 VESKHERDRRS--ERDYEHAEPEDDRGWYEQPEQGHGRQDTEDDQRYDHYEHHRSRGKYD 444
Query: 171 --------------PDDEQERYEGIELDDY 124
PD + +RYE ++ DDY
Sbjct: 445 HMDVRGDHDRYEQYPDHDHDRYERMDQDDY 474
>ref|XP_012072033.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform X1
[Jatropha curcas] gi|643730908|gb|KDP38299.1|
hypothetical protein JCGZ_05185 [Jatropha curcas]
Length = 509
Score = 57.8 bits (138), Expect = 3e-06
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLES------YDHYERH-CLGQLD 172
V+SKHE+DR ER+Y+ EPE DR WY PE + + YDHYE H G+ D
Sbjct: 393 VESKHERDRRS--ERDYEHAEPEDDRGWYEQPEQGHGRQDTEDDQRYDHYEHHRSRGKYD 450
Query: 171 --------------PDDEQERYEGIELDDY 124
PD + +RYE ++ DDY
Sbjct: 451 HMDVRGDHDRYEQYPDHDHDRYERMDQDDY 480
>ref|XP_010254879.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nelumbo
nucifera]
Length = 499
Score = 57.4 bits (137), Expect = 4e-06
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Frame = -1
Query: 327 DSKHEQDRPGDREREYDDIEPEYDREWYG---------HPEPENRLESYDHYERHCLGQL 175
++KHE+D G+++REYD EPE+ REWY HP+ + YDH L
Sbjct: 389 ETKHERDNQGEKDREYDRGEPEHGREWYDNMEPGHGYVHPDQDREQGHYDHQGHRQYDDL 448
Query: 174 DPDDE-------QERYEGIELDDYQ 121
+P + ERYE +E DY+
Sbjct: 449 EPQGDPNLYNHGAERYEQMEPADYR 473
>gb|KDO79520.1| hypothetical protein CISIN_1g010771mg [Citrus sinensis]
Length = 473
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLESYDHYERHCLGQLDPDDEQER 151
+DSKHE+DR G ER+YD + E DR WY H E Y ++R+ DD+ +R
Sbjct: 388 IDSKHERDRHG--ERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRY---NQYHDDDNDR 442
Query: 150 YEGIELDDYQ 121
Y+ +E DDY+
Sbjct: 443 YDQMEEDDYR 452
>gb|KDO79518.1| hypothetical protein CISIN_1g010771mg [Citrus sinensis]
Length = 501
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLESYDHYERHCLGQLDPDDEQER 151
+DSKHE+DR G ER+YD + E DR WY H E Y ++R+ DD+ +R
Sbjct: 416 IDSKHERDRHG--ERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRY---NQYHDDDNDR 470
Query: 150 YEGIELDDYQ 121
Y+ +E DDY+
Sbjct: 471 YDQMEEDDYR 480
>ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
gi|568824794|ref|XP_006466779.1| PREDICTED: U1 small
nuclear ribonucleoprotein 70 kDa-like [Citrus sinensis]
gi|557527686|gb|ESR38936.1| hypothetical protein
CICLE_v10025502mg [Citrus clementina]
gi|641860830|gb|KDO79519.1| hypothetical protein
CISIN_1g010771mg [Citrus sinensis]
Length = 480
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLESYDHYERHCLGQLDPDDEQER 151
+DSKHE+DR G ER+YD + E DR WY H E Y ++R+ DD+ +R
Sbjct: 395 IDSKHERDRHG--ERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRY---NQYHDDDNDR 449
Query: 150 YEGIELDDYQ 121
Y+ +E DDY+
Sbjct: 450 YDQMEEDDYR 459
>ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
gi|557527685|gb|ESR38935.1| hypothetical protein
CICLE_v10025502mg [Citrus clementina]
Length = 478
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -1
Query: 330 VDSKHEQDRPGDREREYDDIEPEYDREWYGHPEPENRLESYDHYERHCLGQLDPDDEQER 151
+DSKHE+DR G ER+YD + E DR WY H E Y ++R+ DD+ +R
Sbjct: 393 IDSKHERDRHG--ERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRY---NQYHDDDNDR 447
Query: 150 YEGIELDDYQ 121
Y+ +E DDY+
Sbjct: 448 YDQMEEDDYR 457