BLASTX nr result
ID: Cinnamomum23_contig00053662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00053662
(663 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_049326.1| replicase [Pea early-browning virus] gi|61020|e... 75 4e-11
ref|NP_049325.1| replicase [Pea early-browning virus] gi|4456716... 75 4e-11
ref|NP_620033.1| 195K protein [Pepper ringspot virus] gi|401790|... 70 8e-10
ref|NP_620034.1| 136K protein [Pepper ringspot virus] gi|398068|... 68 5e-09
ref|NP_733823.1| replicase p1 [Prunus necrotic ringspot virus] g... 65 3e-08
ref|NP_619740.1| replication-associated protein [Pepper mild mot... 65 4e-08
gb|AKL59776.1| 183 kDa protein [Pepper mild mottle virus] 65 4e-08
gb|AIC77173.1| replicase [Pepper mild mottle virus] 65 4e-08
gb|AAW55638.1| 183 kDa protein [Pepper mild mottle virus] 65 4e-08
sp|P89657.1|RDRP_PMMVJ RecName: Full=Replicase large subunit; Al... 65 4e-08
dbj|BAJ19098.1| 183 kDa protein [Pepper mild mottle virus] 65 4e-08
dbj|BAF52937.1| 180k replication protein [Pepper mild mottle virus] 65 4e-08
dbj|BAE92302.1| 183 kDa protein [Pepper mild mottle virus] 65 4e-08
dbj|BAD90598.1| 183 KDa protein [Pepper mild mottle virus] 65 4e-08
emb|CAC59955.1| 183 kDa protein [Pepper mild mottle virus] 64 7e-08
gb|AKL59777.1| 126 kDa protein [Pepper mild mottle virus] 63 2e-07
gb|AIC77172.1| replicase [Pepper mild mottle virus] 63 2e-07
gb|AAW55639.1| 126 kDa protein [Pepper mild mottle virus] 63 2e-07
dbj|BAB84693.1| 126 kDa protein [Pepper mild mottle virus] 63 2e-07
ref|NP_619741.1| replication-associated protein [Pepper mild mot... 63 2e-07
>ref|NP_049326.1| replicase [Pea early-browning virus] gi|61020|emb|CAA32172.1| unnamed
protein product [Pea early-browning virus]
Length = 1246
Score = 74.7 bits (182), Expect = 4e-11
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Frame = -1
Query: 639 VTMGTLSYPKFV-HWNSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
V+ TL + + ++ +E + ++YRCP DV L R+Y + ++ T + LRS+ K
Sbjct: 1072 VSQLTLRFTSLIGRFDEVEEKRMSYRCPVDVALTLDRFY----TGKVVTKNSVLRSMDVK 1127
Query: 462 IVKSIDDPLFKVAKKGFDYATFLRADR---ANLLMGKDFVDGKLHPDSKMSRVYTVHEIQ 292
+ S + + G Y TFL++++ ANLL + S V TVHE Q
Sbjct: 1128 RIGSKEQVEME---HGIQYLTFLQSEKKDIANLLCQRKV----------KSFVNTVHEAQ 1174
Query: 291 GKTVNRMNIIRMNPHSAELFNKPEYRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
GKT ++ ++R+ P L EY++ A SR VY T+ +D + L+R++ + +
Sbjct: 1175 GKTFKKVRLVRLKPTDDVLARGQEYQIVALSRHTQSLVYETVK-DDEVSALIRDSAACTK 1233
Query: 111 ETLRSFMVD 85
+L + V+
Sbjct: 1234 SSLMRYFVE 1242
>ref|NP_049325.1| replicase [Pea early-browning virus] gi|4456716|emb|CAB37343.1|
unnamed protein product [Pea early-browning virus]
Length = 1766
Score = 74.7 bits (182), Expect = 4e-11
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Frame = -1
Query: 639 VTMGTLSYPKFV-HWNSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
V+ TL + + ++ +E + ++YRCP DV L R+Y + ++ T + LRS+ K
Sbjct: 1072 VSQLTLRFTSLIGRFDEVEEKRMSYRCPVDVALTLDRFY----TGKVVTKNSVLRSMDVK 1127
Query: 462 IVKSIDDPLFKVAKKGFDYATFLRADR---ANLLMGKDFVDGKLHPDSKMSRVYTVHEIQ 292
+ S + + G Y TFL++++ ANLL + S V TVHE Q
Sbjct: 1128 RIGSKEQVEME---HGIQYLTFLQSEKKDIANLLCQRKV----------KSFVNTVHEAQ 1174
Query: 291 GKTVNRMNIIRMNPHSAELFNKPEYRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
GKT ++ ++R+ P L EY++ A SR VY T+ +D + L+R++ + +
Sbjct: 1175 GKTFKKVRLVRLKPTDDVLARGQEYQIVALSRHTQSLVYETVK-DDEVSALIRDSAACTK 1233
Query: 111 ETLRSFMVD 85
+L + V+
Sbjct: 1234 SSLMRYFVE 1242
>ref|NP_620033.1| 195K protein [Pepper ringspot virus] gi|401790|gb|AAA47081.1| 195K
protein [Pepper ringspot virus]
Length = 1698
Score = 70.5 bits (171), Expect = 8e-10
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Frame = -1
Query: 600 WNSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYKIVKSIDDPLFKVAK 421
++ +E + +TYRCP DV L R+Y + ++ T + LRS++ K + S + +
Sbjct: 1019 FDEVEEKRLTYRCPIDVALSLDRFY----TGKVVTKNNVLRSMTTKRISSKEQVTME--- 1071
Query: 420 KGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQGKTVNRMNIIRMNPHSA 241
KG Y TFL++++ + L + V TVHE QGKT ++ ++R
Sbjct: 1072 KGVQYLTFLQSEKKEIAT-------MLALRKIEAAVNTVHEAQGKTFKKVILVRTKVTDD 1124
Query: 240 ELFNKPEYRVTAFSRALIETVYITISMNDPILVLLREAISVSDETL-RSFMVDTPSW 73
L EYR+ A SR VY T+ +D + L+ E S+ +L R F+ D W
Sbjct: 1125 VLARGQEYRIVAISRHTQAMVYETVK-DDEVSRLIAETSSLPKASLMRYFVTDAALW 1180
>ref|NP_620034.1| 136K protein [Pepper ringspot virus] gi|398068|gb|AAA47082.1| 136K
protein [Pepper ringspot virus]
Length = 1179
Score = 67.8 bits (164), Expect = 5e-09
Identities = 50/171 (29%), Positives = 83/171 (48%)
Frame = -1
Query: 600 WNSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYKIVKSIDDPLFKVAK 421
++ +E + +TYRCP DV L R+Y + ++ T + LRS++ K + S + +
Sbjct: 1019 FDEVEEKRLTYRCPIDVALSLDRFY----TGKVVTKNNVLRSMTTKRISSKEQVTME--- 1071
Query: 420 KGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQGKTVNRMNIIRMNPHSA 241
KG Y TFL++++ + L + V TVHE QGKT ++ ++R
Sbjct: 1072 KGVQYLTFLQSEKKEIAT-------MLALRKIEAAVNTVHEAQGKTFKKVILVRTKVTDD 1124
Query: 240 ELFNKPEYRVTAFSRALIETVYITISMNDPILVLLREAISVSDETLRSFMV 88
L EYR+ A SR VY T+ +D + L+ E S+ +L + V
Sbjct: 1125 VLARGQEYRIVAISRHTQAMVYETVK-DDEVSRLIAETSSLPKASLMRYFV 1174
>ref|NP_733823.1| replicase p1 [Prunus necrotic ringspot virus]
gi|14582372|gb|AAK69474.1|AF278534_1 replicase p1 [Prunus
necrotic ringspot virus]
Length = 1045
Score = 65.5 bits (158), Expect = 3e-08
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Frame = -1
Query: 579 DITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYKIVKSIDDPLFKVAKKGFD-YA 403
++TYRCPAD LS+++ +KTA+ LRS+S K + S+ + FD Y
Sbjct: 884 NLTYRCPADATMALSKWF---YRRNVKTANTTLRSMSVKPIVSVSQ-----IDRDFDLYM 935
Query: 402 TFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQGKTVNRMNIIRMNPHSAELFN-- 229
T +A++ L+ G + D +V+T E QGKT +R ++R++ S LF
Sbjct: 936 THTQAEKHTLI-----ASGVVPKD----KVFTTAEAQGKTESRAALVRLSRTSMSLFTGK 986
Query: 228 ----KPEYRVTAFSRALIETVYITIS---MNDPILVLLREAISVSDETLRSFM 91
P + + A SR + VY T++ +D I +R+ + SD+T+ S++
Sbjct: 987 DPLMGPCHSLVAMSRFKRQFVYFTVADTDSDDLIAKAIRDVSNSSDDTVSSYI 1039
>ref|NP_619740.1| replication-associated protein [Pepper mild mottle virus]
gi|12644188|sp|P29098.2|RDRP_PMMVS RecName:
Full=Replicase large subunit; AltName: Full=183 kDa
protein; AltName: Full=RNA-directed RNA polymerase;
Contains: RecName: Full=Replicase small subunit; AltName:
Full=126 kDa protein; AltName: Full=Methyltransferase/RNA
helicase; Short=MT/HEL gi|333295|gb|AAB02334.1|
replication-associated protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQXQLQIESV 1125
>gb|AKL59776.1| 183 kDa protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQXQLQIESV 1125
>gb|AIC77173.1| replicase [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQXQLQIESV 1125
>gb|AAW55638.1| 183 kDa protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQYQLQIESV 1125
>sp|P89657.1|RDRP_PMMVJ RecName: Full=Replicase large subunit; AltName: Full=183 kDa protein;
AltName: Full=RNA-directed RNA polymerase; Contains:
RecName: Full=Replicase small subunit; AltName: Full=126
kDa protein; AltName: Full=Methyltransferase/RNA
helicase; Short=MT/HEL gi|1853960|dbj|BAA19167.1| 183kDa
protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQYQLQIESV 1125
>dbj|BAJ19098.1| 183 kDa protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQXQLQIESV 1125
>dbj|BAF52937.1| 180k replication protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQXQLQIESV 1125
>dbj|BAE92302.1| 183 kDa protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQXQLQIESV 1125
>dbj|BAD90598.1| 183 KDa protein [Pepper mild mottle virus]
Length = 1612
Score = 64.7 bits (156), Expect = 4e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQYQLQIESV 1125
>emb|CAC59955.1| 183 kDa protein [Pepper mild mottle virus]
Length = 1612
Score = 63.9 bits (154), Expect = 7e-08
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + + +E R T RCPAD+ + L++ Y ++ A RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDVVETRRTTLRCPADITFFLNQRY----EGQVMCASSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + ++ + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISRQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVDTPSWLEEKIKKI 49
L + VD + + +I+ +
Sbjct: 1105 YLLDMYKVDVSTQYQLQIESV 1125
>gb|AKL59777.1| 126 kDa protein [Pepper mild mottle virus]
Length = 1117
Score = 62.8 bits (151), Expect = 2e-07
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVD 85
L + VD
Sbjct: 1105 YLLDMYKVD 1113
>gb|AIC77172.1| replicase [Pepper mild mottle virus]
Length = 1117
Score = 62.8 bits (151), Expect = 2e-07
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVD 85
L + VD
Sbjct: 1105 YLLDMYKVD 1113
>gb|AAW55639.1| 126 kDa protein [Pepper mild mottle virus]
Length = 1117
Score = 62.8 bits (151), Expect = 2e-07
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVD 85
L + VD
Sbjct: 1105 YLLDMYKVD 1113
>dbj|BAB84693.1| 126 kDa protein [Pepper mild mottle virus]
Length = 1117
Score = 62.8 bits (151), Expect = 2e-07
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVD 85
L + VD
Sbjct: 1105 YLLDMYKVD 1113
>ref|NP_619741.1| replication-associated protein [Pepper mild mottle virus]
gi|333294|gb|AAB02335.1| replication-associated protein
[Pepper mild mottle virus] gi|1853961|dbj|BAA19166.1| 126
kDa protein [Pepper mild mottle virus]
Length = 1117
Score = 62.8 bits (151), Expect = 2e-07
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Frame = -1
Query: 633 MGTLSYPKFVHW---NSLEFRDITYRCPADVVYMLSRYYGVERSSRLKTAHPNLRSLSYK 463
+ T YPK + +++E R T RCPAD+ + L++ Y ++ RS+S++
Sbjct: 944 VATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVSHE 999
Query: 462 IVK--SIDDPLFKVAKKGFDYATFLRADRANLLMGKDFVDGKLHPDSKMSRVYTVHEIQG 289
+++ ++ +P+ K K TF ++D++ LL+ + + D V+TVHE+QG
Sbjct: 1000 VIQGAAVMNPVSKPLKG--KVITFTQSDKS-LLLSRGYED-----------VHTVHEVQG 1045
Query: 288 KTVNRMNIIRMNPHSAELFNKPE-YRVTAFSRALIETVYITISMNDPILVLLREAISVSD 112
+T ++++R+ P + +K + + + SR Y T+ + D ++ +LR+ VS
Sbjct: 1046 ETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVL-DAVVSVLRDLECVSS 1104
Query: 111 ETLRSFMVD 85
L + VD
Sbjct: 1105 YLLDMYKVD 1113