BLASTX nr result

ID: Cinnamomum23_contig00053631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00053631
         (317 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                49   3e-07
emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera]    49   5e-06
ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118...    47   6e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 48.9 bits (115), Expect(3) = 3e-07
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
 Frame = -3

Query: 312  LVVKGYKKEYGFRGQND--------TVCTLIFVAAGHH*PLYQMDVKNIFLNSLITLVIY 157
            LV KGY ++YG   +          T+ TLI VA+     + Q+DVKN FLN  +   +Y
Sbjct: 939  LVAKGYSQQYGMDYEETFAPIAKMTTIRTLIAVASIRQWHISQLDVKNAFLNGDLQEEVY 998

Query: 156  IALTPGLPHLRHYVC 112
            +A  PG+ H   YVC
Sbjct: 999  MAPPPGISHDSGYVC 1013



 Score = 29.3 bits (64), Expect(3) = 3e-07
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 107  IYGLKKAPRSWFE 69
            +YGLK+APR+WFE
Sbjct: 1019 LYGLKQAPRAWFE 1031



 Score = 21.9 bits (45), Expect(3) = 3e-07
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 67   FERFNNVVLSIGFSQSFNYSPL 2
            FE+F+ V+ S+GF  S + S L
Sbjct: 1030 FEKFSIVISSLGFVSSSHDSAL 1051


>emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera]
          Length = 1174

 Score = 49.3 bits (116), Expect(2) = 5e-06
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
 Frame = -3

Query: 315 CLVVKGYKKEYGFRGQN--------DTVCTLIFVAAGHH*PLYQMDVKNIFLNSLITLVI 160
           CLV KG+ +EYG   +          +V  L+ VAA     L+QMDVKN FLN  ++  +
Sbjct: 742 CLVAKGFTQEYGIDSEETFAPVARISSVRALLAVAAARKWDLFQMDVKNAFLNGDLSEEV 801

Query: 159 YIALTPGLPHLRHYVC 112
           Y+   PGL    + VC
Sbjct: 802 YMQPPPGLSVESNKVC 817



 Score = 27.3 bits (59), Expect(2) = 5e-06
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 107 IYGLKKAPRSWF 72
           +YGLK+APR+WF
Sbjct: 823 LYGLKQAPRAWF 834


>ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118536 [Populus
           euphratica]
          Length = 1202

 Score = 47.0 bits (110), Expect(2) = 6e-06
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
 Frame = -3

Query: 312 LVVKGYKKEYGFRGQND--------TVCTLIFVAAGHH*PLYQMDVKNIFLNSLITLVIY 157
           LV KGY ++YG   +          T+ TLI VA+     + Q+DVKN FLN  +   +Y
Sbjct: 471 LVAKGYSQQYGMDYEETFAPIAKMTTIRTLIVVASIRQWHISQLDVKNAFLNGDLQEEVY 530

Query: 156 IALTPGLPHLRHYVC 112
           +A  P + H   YVC
Sbjct: 531 MAPPPSISHDSGYVC 545



 Score = 29.3 bits (64), Expect(2) = 6e-06
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 107 IYGLKKAPRSWFE 69
           +YGLK+APR+WFE
Sbjct: 551 LYGLKQAPRAWFE 563


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