BLASTX nr result
ID: Cinnamomum23_contig00053631
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum23_contig00053631 (317 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 49 3e-07 emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera] 49 5e-06 ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118... 47 6e-06 >emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] Length = 1382 Score = 48.9 bits (115), Expect(3) = 3e-07 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 8/75 (10%) Frame = -3 Query: 312 LVVKGYKKEYGFRGQND--------TVCTLIFVAAGHH*PLYQMDVKNIFLNSLITLVIY 157 LV KGY ++YG + T+ TLI VA+ + Q+DVKN FLN + +Y Sbjct: 939 LVAKGYSQQYGMDYEETFAPIAKMTTIRTLIAVASIRQWHISQLDVKNAFLNGDLQEEVY 998 Query: 156 IALTPGLPHLRHYVC 112 +A PG+ H YVC Sbjct: 999 MAPPPGISHDSGYVC 1013 Score = 29.3 bits (64), Expect(3) = 3e-07 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = -1 Query: 107 IYGLKKAPRSWFE 69 +YGLK+APR+WFE Sbjct: 1019 LYGLKQAPRAWFE 1031 Score = 21.9 bits (45), Expect(3) = 3e-07 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -2 Query: 67 FERFNNVVLSIGFSQSFNYSPL 2 FE+F+ V+ S+GF S + S L Sbjct: 1030 FEKFSIVISSLGFVSSSHDSAL 1051 >emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera] Length = 1174 Score = 49.3 bits (116), Expect(2) = 5e-06 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 8/76 (10%) Frame = -3 Query: 315 CLVVKGYKKEYGFRGQN--------DTVCTLIFVAAGHH*PLYQMDVKNIFLNSLITLVI 160 CLV KG+ +EYG + +V L+ VAA L+QMDVKN FLN ++ + Sbjct: 742 CLVAKGFTQEYGIDSEETFAPVARISSVRALLAVAAARKWDLFQMDVKNAFLNGDLSEEV 801 Query: 159 YIALTPGLPHLRHYVC 112 Y+ PGL + VC Sbjct: 802 YMQPPPGLSVESNKVC 817 Score = 27.3 bits (59), Expect(2) = 5e-06 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = -1 Query: 107 IYGLKKAPRSWF 72 +YGLK+APR+WF Sbjct: 823 LYGLKQAPRAWF 834 >ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118536 [Populus euphratica] Length = 1202 Score = 47.0 bits (110), Expect(2) = 6e-06 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 8/75 (10%) Frame = -3 Query: 312 LVVKGYKKEYGFRGQND--------TVCTLIFVAAGHH*PLYQMDVKNIFLNSLITLVIY 157 LV KGY ++YG + T+ TLI VA+ + Q+DVKN FLN + +Y Sbjct: 471 LVAKGYSQQYGMDYEETFAPIAKMTTIRTLIVVASIRQWHISQLDVKNAFLNGDLQEEVY 530 Query: 156 IALTPGLPHLRHYVC 112 +A P + H YVC Sbjct: 531 MAPPPSISHDSGYVC 545 Score = 29.3 bits (64), Expect(2) = 6e-06 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = -1 Query: 107 IYGLKKAPRSWFE 69 +YGLK+APR+WFE Sbjct: 551 LYGLKQAPRAWFE 563