BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00052020
         (582 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266459.1| PREDICTED: high mobility group B protein 6-l...    60   5e-07
ref|XP_007040467.1| HMG box protein isoform 2 [Theobroma cacao] ...    59   2e-06
ref|XP_007040466.1| High mobility group family isoform 1 [Theobr...    59   2e-06

>ref|XP_010266459.1| PREDICTED: high mobility group B protein 6-like [Nelumbo nucifera]
          Length = 553

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
 Frame = -1

Query: 378 KRGGNRKPLKPKNPSGNEANIL----------PSSPIADSGKENRGGLSLLLS------S 247
           K+G NR+ LKPKN + NEANIL          P  P+ D+ KEN   LSL  S      +
Sbjct: 67  KKGRNRRALKPKNATANEANILAGKISQASPSPLPPLQDAEKENHETLSLPRSPKKTKAA 126

Query: 246 PQRNDPKQAFAXXXXXXXXXXXXXXXXXXXXXXXXXERDEMLRRKEEDIQNWGXXXXXXX 67
            ++ + K +F                           RD+ML++K+E+++N G       
Sbjct: 127 SKKKESKMSFEKELEELQGKLEQMRLEKEKTEQLLKARDDMLKQKQEELENRGKEQEKLQ 186

Query: 66  XXXXXXXXXXEFQPTMSLPLV 4
                     EF+PTMS P+V
Sbjct: 187 LELKKLQKLKEFKPTMSFPIV 207


>ref|XP_007040467.1| HMG box protein isoform 2 [Theobroma cacao]
           gi|508777712|gb|EOY24968.1| HMG box protein isoform 2
           [Theobroma cacao]
          Length = 370

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 49/155 (31%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
 Frame = -1

Query: 399 MAEVLHKKRGGNRKPLKPKNPSGNEANILP-----------SSPI-ADSGKENRGGLSLL 256
           + +V  K R   RK LK KNPS NEANIL            +SP+ AD  KEN+ GLS  
Sbjct: 6   VVDVPKKSRNNGRKALKQKNPSTNEANILAQKLSQASPTPVASPMEADPSKENQEGLSQP 65

Query: 255 LSSP----------QRNDPKQAFAXXXXXXXXXXXXXXXXXXXXXXXXXERDEMLRRKEE 106
           L+SP          Q    +Q+F                          E+DEML+ KEE
Sbjct: 66  LTSPKKGKVAARGKQGKQQQQSFEKDLQEMQEMLQKLRIEKEKTEVLLKEKDEMLKMKEE 125

Query: 105 DIQNWGXXXXXXXXXXXXXXXXXEFQPTMSLPLVQ 1
           +++  G                 EF+PTM+ P+ Q
Sbjct: 126 ELETKGKEQEKLQMEFKKLQKMKEFKPTMTFPIAQ 160


>ref|XP_007040466.1| High mobility group family isoform 1 [Theobroma cacao]
           gi|508777711|gb|EOY24967.1| High mobility group family
           isoform 1 [Theobroma cacao]
          Length = 502

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 49/155 (31%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
 Frame = -1

Query: 399 MAEVLHKKRGGNRKPLKPKNPSGNEANILP-----------SSPI-ADSGKENRGGLSLL 256
           + +V  K R   RK LK KNPS NEANIL            +SP+ AD  KEN+ GLS  
Sbjct: 6   VVDVPKKSRNNGRKALKQKNPSTNEANILAQKLSQASPTPVASPMEADPSKENQEGLSQP 65

Query: 255 LSSP----------QRNDPKQAFAXXXXXXXXXXXXXXXXXXXXXXXXXERDEMLRRKEE 106
           L+SP          Q    +Q+F                          E+DEML+ KEE
Sbjct: 66  LTSPKKGKVAARGKQGKQQQQSFEKDLQEMQEMLQKLRIEKEKTEVLLKEKDEMLKMKEE 125

Query: 105 DIQNWGXXXXXXXXXXXXXXXXXEFQPTMSLPLVQ 1
           +++  G                 EF+PTM+ P+ Q
Sbjct: 126 ELETKGKEQEKLQMEFKKLQKMKEFKPTMTFPIAQ 160